Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:14:18 (1634): wrapper (7.7.26015): starting
04:14:18 (1634): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 04:14:18] Arguments: --nthreads 12
[2026-01-09 04:14:18] Threads: 12
[2026-01-09 04:14:18] Checking for CVMFS
[2026-01-09 04:14:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 04:14:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 04:14:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 04:14:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 04:14:19] 2.11.2.0 2910 102067 98888 154937 3 59 14605900 20275201 1 130560 0 25519974 99.953 3798522 35525 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 04:14:19] CVMFS is ok
[2026-01-09 04:14:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 04:14:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 04:14:19] Further information can be found at the LHC@home message board.
[2026-01-09 04:14:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 04:14:19] Checking for apptainer binary...
[2026-01-09 04:14:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 04:14:19] Running /usr/bin/apptainer --version
[2026-01-09 04:14:19] apptainer version 1.3.2-1.el7
[2026-01-09 04:14:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 04:14:21] c-205-11.aglt2.org
[2026-01-09 04:14:21] apptainer works
[2026-01-09 04:14:21] Set ATHENA_PROC_NUMBER=12
[2026-01-09 04:14:21] Set ATHENA_CORE_NUMBER=12
[2026-01-09 04:14:21] Starting ATLAS job with PandaID=6963157489
[2026-01-09 04:14:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 05:56:53]  *** The last 200 lines of the pilot log: ***
[2026-01-09 05:56:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 05:56:53]  replicas=None
[2026-01-09 05:56:53]  scope=mc23_13p6TeV
[2026-01-09 05:56:53]  status=None
[2026-01-09 05:56:53]  status_code=0
[2026-01-09 05:56:53]  storage_token=
[2026-01-09 05:56:53]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963157489/log.47898826._032350.job.log.tgz.1
[2026-01-09 05:56:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/e4/log.47898826._032350.job.log.tgz.1
[2026-01-09 05:56:53]  workdir=None
[2026-01-09 05:56:53] ]
[2026-01-09 05:56:53] 2026-01-09 10:55:48,211 | INFO     | transferring file log.47898826._032350.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963157489/log.47898826._032350.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 05:56:53] 2026-01-09 10:55:48,211 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963157489/log.47898826._032350.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._032350.job
[2026-01-09 05:56:53] 2026-01-09 10:55:48,234 | INFO     | adding to output.list: log.47898826._032350.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/e4/log.47898826._032350.job.log.tg
[2026-01-09 05:56:53] 2026-01-09 10:55:48,235 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 05:56:53] 2026-01-09 10:55:48,235 | INFO     | summary of transferred files:
[2026-01-09 05:56:53] 2026-01-09 10:55:48,235 | INFO     |  -- lfn=log.47898826._032350.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 05:56:53] 2026-01-09 10:55:48,235 | INFO     | stage-out finished correctly
[2026-01-09 05:56:53] 2026-01-09 10:55:48,726 | INFO     | time since job start (6071s) is within the limit (349056.0s)
[2026-01-09 05:56:53] 2026-01-09 10:55:49,539 | INFO     | monitor loop #451: job 0:6963157489 is in state 'finished'
[2026-01-09 05:56:53] 2026-01-09 10:55:49,539 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 05:56:53] 2026-01-09 10:55:50,104 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 05:56:53] 2026-01-09 10:55:50,732 | INFO     | time since job start (6073s) is within the limit (349056.0s)
[2026-01-09 05:56:53] 2026-01-09 10:55:52,042 | INFO     | monitor loop #452: job 0:6963157489 is in state 'finished'
[2026-01-09 05:56:53] 2026-01-09 10:55:52,043 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 05:56:53] 2026-01-09 10:55:52,250 | INFO     | job 6963157489 has state=finished
[2026-01-09 05:56:53] 2026-01-09 10:55:52,250 | INFO     | preparing for final server update for job 6963157489 in state='finished'
[2026-01-09 05:56:53] 2026-01-09 10:55:52,251 | INFO     | this job has now completed (state=finished)
[2026-01-09 05:56:53] 2026-01-09 10:55:52,251 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 05:56:53] 2026-01-09 10:55:52,251 | INFO     | log transfer has been attempted: DONE
[2026-01-09 05:56:53] 2026-01-09 10:55:52,252 | INFO     | job 6963157489 has finished - writing final server update
[2026-01-09 05:56:53] 2026-01-09 10:55:52,252 | INFO     | total number of processed events: 400 (read)
[2026-01-09 05:56:53] 2026-01-09 10:55:52,253 | INFO     | executing command: lscpu
[2026-01-09 05:56:53] 2026-01-09 10:55:52,279 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 05:56:53] 2026-01-09 10:55:52,738 | INFO     | time since job start (6075s) is within the limit (349056.0s)
[2026-01-09 05:56:53] 2026-01-09 10:55:54,545 | INFO     | monitor loop #453: job 0:6963157489 is in state 'finished'
[2026-01-09 05:56:53] 2026-01-09 10:55:54,545 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 05:56:53] 2026-01-09 10:55:54,743 | INFO     | time since job start (6077s) is within the limit (349056.0s)
[2026-01-09 05:56:53] 2026-01-09 10:55:56,748 | INFO     | time since job start (6079s) is within the limit (349056.0s)
[2026-01-09 05:56:53] 2026-01-09 10:55:57,028 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 05:56:53] 2026-01-09 10:55:57,031 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2026-01-09 05:56:53] 2026-01-09 10:55:57,034 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963157489/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 05:56:53] 2026-01-09 10:55:57,035 | INFO     | extracted standard info from prmon json
[2026-01-09 05:56:53] 2026-01-09 10:55:57,035 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 05:56:53] 2026-01-09 10:55:57,035 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 05:56:53] 2026-01-09 10:55:57,036 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 05:56:53] 2026-01-09 10:55:57,036 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 05:56:53] 2026-01-09 10:55:57,038 | INFO     | fitting pss+swap vs Time
[2026-01-09 05:56:53] 2026-01-09 10:55:57,038 | INFO     | sum of square deviations: 241429643.0
[2026-01-09 05:56:53] 2026-01-09 10:55:57,039 | INFO     | sum of deviations: -1480444105.5000002
[2026-01-09 05:56:53] 2026-01-09 10:55:57,039 | INFO     | mean x: 1767953186.5
[2026-01-09 05:56:53] 2026-01-09 10:55:57,039 | INFO     | mean y: 2724444.2282608696
[2026-01-09 05:56:53] 2026-01-09 10:55:57,039 | INFO     | intersect: 10843795330.266342
[2026-01-09 05:56:53] 2026-01-09 10:55:57,040 | INFO     | chi2: 0.018421749873017028
[2026-01-09 05:56:53] 2026-01-09 10:55:57,040 | INFO     | current memory leak: -6.13 B/s (using 92 data points, chi2=0.02)
[2026-01-09 05:56:53] 2026-01-09 10:55:57,040 | INFO     | could have reported an average CPU frequency of 2122 MHz (7 samples)
[2026-01-09 05:56:53] 2026-01-09 10:55:57,040 | INFO     | ..............................
[2026-01-09 05:56:53] 2026-01-09 10:55:57,040 | INFO     | . Timing measurements:
[2026-01-09 05:56:53] 2026-01-09 10:55:57,040 | INFO     | . get job = 0 s
[2026-01-09 05:56:53] 2026-01-09 10:55:57,040 | INFO     | . initial setup = 2 s
[2026-01-09 05:56:53] 2026-01-09 10:55:57,041 | INFO     | . payload setup = 7 s
[2026-01-09 05:56:53] 2026-01-09 10:55:57,041 | INFO     | . stage-in = 0 s
[2026-01-09 05:56:53] 2026-01-09 10:55:57,041 | INFO     | . payload execution = 6042 s
[2026-01-09 05:56:53] 2026-01-09 10:55:57,041 | INFO     | . stage-out = 0 s
[2026-01-09 05:56:53] 2026-01-09 10:55:57,041 | INFO     | . log creation = 0 s
[2026-01-09 05:56:53] 2026-01-09 10:55:57,041 | INFO     | ..............................
[2026-01-09 05:56:53] 2026-01-09 10:55:57,137 | INFO     | 
[2026-01-09 05:56:53] 2026-01-09 10:55:57,137 | INFO     | job summary report
[2026-01-09 05:56:53] 2026-01-09 10:55:57,138 | INFO     | --------------------------------------------------
[2026-01-09 05:56:53] 2026-01-09 10:55:57,138 | INFO     | PanDA job id: 6963157489
[2026-01-09 05:56:53] 2026-01-09 10:55:57,138 | INFO     | task id: 47898826
[2026-01-09 05:56:53] 2026-01-09 10:55:57,138 | INFO     | errors: (none)
[2026-01-09 05:56:53] 2026-01-09 10:55:57,138 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 05:56:53] 2026-01-09 10:55:57,138 | INFO     | pilot state: finished 
[2026-01-09 05:56:53] 2026-01-09 10:55:57,139 | INFO     | transexitcode: 0
[2026-01-09 05:56:53] 2026-01-09 10:55:57,139 | INFO     | exeerrorcode: 0
[2026-01-09 05:56:53] 2026-01-09 10:55:57,139 | INFO     | exeerrordiag: 
[2026-01-09 05:56:53] 2026-01-09 10:55:57,139 | INFO     | exitcode: 0
[2026-01-09 05:56:53] 2026-01-09 10:55:57,139 | INFO     | exitmsg: OK
[2026-01-09 05:56:53] 2026-01-09 10:55:57,139 | INFO     | cpuconsumptiontime: 67547 s
[2026-01-09 05:56:53] 2026-01-09 10:55:57,140 | INFO     | nevents: 400
[2026-01-09 05:56:53] 2026-01-09 10:55:57,140 | INFO     | neventsw: 0
[2026-01-09 05:56:53] 2026-01-09 10:55:57,140 | INFO     | pid: 12171
[2026-01-09 05:56:53] 2026-01-09 10:55:57,140 | INFO     | pgrp: 12171
[2026-01-09 05:56:53] 2026-01-09 10:55:57,140 | INFO     | corecount: 12
[2026-01-09 05:56:53] 2026-01-09 10:55:57,140 | INFO     | event service: False
[2026-01-09 05:56:53] 2026-01-09 10:55:57,141 | INFO     | sizes: {0: 2283969, 5: 2284231, 11: 2284287, 6053: 2311038, 6055: 2320036, 6057: 2320092, 6063: 2320414}
[2026-01-09 05:56:53] 2026-01-09 10:55:57,141 | INFO     | --------------------------------------------------
[2026-01-09 05:56:53] 2026-01-09 10:55:57,141 | INFO     | 
[2026-01-09 05:56:53] 2026-01-09 10:55:57,141 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 05:56:53] 2026-01-09 10:55:57,164 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 05:56:53] 2026-01-09 10:55:57,165 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 05:56:53] 2026-01-09 10:55:57,165 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 05:56:53] 2026-01-09 10:55:57,165 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 05:56:53] 2026-01-09 10:55:57,165 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 05:56:53] 2026-01-09 10:55:57,165 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 05:56:53] 2026-01-09 10:55:57,166 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 05:56:53] 2026-01-09 10:55:57,166 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 05:56:53] 2026-01-09 10:55:57,166 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 05:56:53] 2026-01-09 10:55:57,166 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 05:56:53] 2026-01-09 10:55:57,166 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 05:56:53] 2026-01-09 10:55:57,167 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 05:56:53] 2026-01-09 10:55:57,167 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 05:56:53] 2026-01-09 10:55:57,167 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 05:56:53] 2026-01-09 10:55:57,167 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 05:56:53] 2026-01-09 10:55:57,167 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 05:56:53] 2026-01-09 10:55:57,167 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 05:56:53] 2026-01-09 10:55:57,168 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 05:56:53] 2026-01-09 10:55:57,168 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 05:56:53] 2026-01-09 10:55:57,168 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 05:56:53] 2026-01-09 10:55:57,168 | INFO     | job 6963157489 has completed (purged errors)
[2026-01-09 05:56:53] 2026-01-09 10:55:57,168 | INFO     | overall cleanup function is called
[2026-01-09 05:56:53] 2026-01-09 10:55:58,175 | INFO     | --- collectZombieJob: --- 10, [12171]
[2026-01-09 05:56:53] 2026-01-09 10:55:58,175 | INFO     | zombie collector waiting for pid 12171
[2026-01-09 05:56:53] 2026-01-09 10:55:58,175 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 05:56:53] 2026-01-09 10:55:58,176 | INFO     | collected zombie processes
[2026-01-09 05:56:53] 2026-01-09 10:55:58,176 | INFO     | will attempt to kill all subprocesses of pid=12171
[2026-01-09 05:56:53] 2026-01-09 10:55:58,268 | INFO     | process IDs to be killed: [12171] (in reverse order)
[2026-01-09 05:56:53] 2026-01-09 10:55:58,318 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 05:56:53] 2026-01-09 10:55:58,318 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 05:56:53] 2026-01-09 10:55:58,322 | INFO     | did not find any defunct processes belonging to 12171
[2026-01-09 05:56:53] 2026-01-09 10:55:58,326 | INFO     | did not find any defunct processes belonging to 12171
[2026-01-09 05:56:53] 2026-01-09 10:55:58,326 | INFO     | ready for new job
[2026-01-09 05:56:53] 2026-01-09 10:55:58,326 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 05:56:53] 2026-01-09 10:55:58,328 | INFO     | ***************************************
[2026-01-09 05:56:53] 2026-01-09 10:55:58,328 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 05:56:53] 2026-01-09 10:55:58,328 | INFO     | ***************************************
[2026-01-09 05:56:53] 2026-01-09 10:55:58,328 | INFO     | 
[2026-01-09 05:56:53] 2026-01-09 10:55:58,329 | INFO     | architecture information:
[2026-01-09 05:56:53] 2026-01-09 10:55:58,329 | INFO     | executing command: cat /etc/os-release
[2026-01-09 05:56:53] 2026-01-09 10:55:58,344 | INFO     | cat /etc/os-release:
[2026-01-09 05:56:53] NAME="CentOS Linux"
[2026-01-09 05:56:53] VERSION="7 (Core)"
[2026-01-09 05:56:53] ID="centos"
[2026-01-09 05:56:53] ID_LIKE="rhel fedora"
[2026-01-09 05:56:53] VERSION_ID="7"
[2026-01-09 05:56:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 05:56:53] ANSI_COLOR="0;31"
[2026-01-09 05:56:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 05:56:53] HOME_URL="https://www.centos.org/"
[2026-01-09 05:56:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 05:56:53] 
[2026-01-09 05:56:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 05:56:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 05:56:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 05:56:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 05:56:53] 
[2026-01-09 05:56:53] 2026-01-09 10:55:58,344 | INFO     | ***************************************
[2026-01-09 05:56:53] 2026-01-09 10:55:58,846 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 05:56:53] 2026-01-09 10:55:58,863 | INFO     | sufficient remaining disk space (29340205056 B)
[2026-01-09 05:56:53] 2026-01-09 10:55:58,863 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 05:56:53] 2026-01-09 10:55:58,864 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 05:56:53] 2026-01-09 10:55:58,864 | INFO     | update_server=False
[2026-01-09 05:56:53] 2026-01-09 10:55:58,864 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 05:56:53] 2026-01-09 10:55:58,864 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:56:53] 2026-01-09 10:55:58,864 | INFO     | aborting loop
[2026-01-09 05:56:53] 2026-01-09 10:55:58,865 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:56:53] 2026-01-09 10:55:58,865 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 05:56:53] 2026-01-09 10:55:59,425 | INFO     | all job control threads have been joined
[2026-01-09 05:56:53] 2026-01-09 10:55:59,618 | INFO     | all payload control threads have been joined
[2026-01-09 05:56:53] 2026-01-09 10:55:59,713 | INFO     | all data control threads have been joined
[2026-01-09 05:56:53] 2026-01-09 10:55:59,869 | INFO     | [job] retrieve thread has finished
[2026-01-09 05:56:53] 2026-01-09 10:55:59,870 | INFO     | [job] job monitor thread has finished
[2026-01-09 05:56:53] 2026-01-09 10:55:59,871 | INFO     | [job] queue monitor thread has finished
[2026-01-09 05:56:53] 2026-01-09 10:56:00,186 | INFO     | [payload] failed_post thread has finished
[2026-01-09 05:56:53] 2026-01-09 10:56:00,196 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 05:56:53] 2026-01-09 10:56:00,429 | INFO     | [job] control thread has finished
[2026-01-09 05:56:53] 2026-01-09 10:56:00,624 | INFO     | [payload] control thread has finished
[2026-01-09 05:56:53] 2026-01-09 10:56:00,642 | INFO     | [data] copytool_in thread has finished
[2026-01-09 05:56:53] 2026-01-09 10:56:00,647 | INFO     | [payload] validate_post thread has finished
[2026-01-09 05:56:53] 2026-01-09 10:56:00,690 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 05:56:53] 2026-01-09 10:56:00,719 | INFO     | [data] control thread has finished
[2026-01-09 05:56:53] 2026-01-09 10:56:00,871 | INFO     | [data] copytool_out thread has finished
[2026-01-09 05:56:53] 2026-01-09 10:56:01,174 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 05:56:53] 2026-01-09 10:56:01,182 | INFO     | [job] validate thread has finished
[2026-01-09 05:56:53] 2026-01-09 10:56:01,218 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 05:56:53] 2026-01-09 10:56:04,696 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 05:56:53] 2026-01-09 10:56:08,896 | INFO     | job.realtimelogging is not enabled
[2026-01-09 05:56:53] 2026-01-09 10:56:09,901 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 05:56:53] 2026-01-09 10:56:29,952 | INFO     | PID=5809 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 05:56:53] 2026-01-09 10:56:29,952 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 05:56:53] 2026-01-09 10:56:29,952 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 05:56:53] 2026-01-09 10:56:29,953 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 05:56:53] 2026-01-09 10:56:46,665 | INFO     | [monitor] cgroup control has ended
[2026-01-09 05:56:53] 2026-01-09 10:56:48,500 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139740300486464)>', '<ExcThread(monitor, started 139739596297984)>']
[2026-01-09 05:56:53] 2026-01-09 10:56:49,050 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 05:56:53] 2026-01-09 10:56:49,050 | INFO     | [monitor] control thread has ended
[2026-01-09 05:56:53] 2026-01-09 10:56:53,501 | INFO     | all workflow threads have been joined
[2026-01-09 05:56:53] 2026-01-09 10:56:53,501 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 05:56:53] 2026-01-09 10:56:53,501 | INFO     | traces error code: 0
[2026-01-09 05:56:53] 2026-01-09 10:56:53,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 05:56:53] 2026-01-09 10:56:53,588 [wrapper] ==== pilot stdout END ====
[2026-01-09 05:56:53] 2026-01-09 10:56:53,592 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 05:56:53] 2026-01-09 10:56:53,595 [wrapper] pilotpid: 5809
[2026-01-09 05:56:53] 2026-01-09 10:56:53,599 [wrapper] Pilot exit status: 0
[2026-01-09 05:56:53] 2026-01-09 10:56:53,615 [wrapper] pandaids: 6963157489
[2026-01-09 05:56:53] 2026-01-09 10:56:53,664 [wrapper] cleanup supervisor_pilot 10118 5810
[2026-01-09 05:56:53] 2026-01-09 10:56:53,668 [wrapper] Test setup, not cleaning
[2026-01-09 05:56:53] 2026-01-09 10:56:53,672 [wrapper] apfmon messages muted
[2026-01-09 05:56:53] 2026-01-09 10:56:53,676 [wrapper] ==== wrapper stdout END ====
[2026-01-09 05:56:53] 2026-01-09 10:56:53,680 [wrapper] ==== wrapper stderr END ====
[2026-01-09 05:56:53]  *** Error codes and diagnostics ***
[2026-01-09 05:56:53]     "exeErrorCode": 0,
[2026-01-09 05:56:53]     "exeErrorDiag": "",
[2026-01-09 05:56:53]     "pilotErrorCode": 0,
[2026-01-09 05:56:53]     "pilotErrorDiag": "",
[2026-01-09 05:56:53]  *** Listing of results directory ***
[2026-01-09 05:56:53] total 443628
[2026-01-09 05:56:53] -rwx------ 1 boincer umatlas     36322 Jan  8 16:44 runpilot2-wrapper.sh
[2026-01-09 05:56:53] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 16:44 queuedata.json
[2026-01-09 05:56:53] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-09 05:56:53] -rw-r--r-- 1 boincer umatlas       100 Jan  9 04:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 05:56:53] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 04:14 run_atlas
[2026-01-09 05:56:53] -rw-r--r-- 1 boincer umatlas       105 Jan  9 04:14 job.xml
[2026-01-09 05:56:53] -rw-r--r-- 2 boincer umatlas 226484066 Jan  9 04:14 EVNT.47898824._001250.pool.root.1
[2026-01-09 05:56:53] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 04:14 start_atlas.sh
[2026-01-09 05:56:53] drwxrwx--x 2 boincer umatlas      4096 Jan  9 04:14 shared
[2026-01-09 05:56:53] -rw-r--r-- 2 boincer umatlas    592382 Jan  9 04:14 input.tar.gz
[2026-01-09 05:56:53] -rw-r--r-- 1 boincer umatlas         0 Jan  9 04:14 boinc_lockfile
[2026-01-09 05:56:53] -rw-r--r-- 1 boincer umatlas      2519 Jan  9 04:14 pandaJob.out
[2026-01-09 05:56:53] -rw------- 1 boincer umatlas    989759 Jan  9 04:14 agis_schedconf.cvmfs.json
[2026-01-09 05:56:53] -rw------- 1 boincer umatlas   1516240 Jan  9 04:14 agis_ddmendpoints.agis.ALL.json
[2026-01-09 05:56:53] drwx------ 5 boincer umatlas      4096 Jan  9 04:14 pilot3
[2026-01-09 05:56:53] -rw-r--r-- 1 boincer umatlas      5868 Jan  9 05:55 init_data.xml
[2026-01-09 05:56:53] -rw------- 1 boincer umatlas 221361655 Jan  9 05:55 HITS.47898826._032350.pool.root.1
[2026-01-09 05:56:53] -rw-r--r-- 1 boincer umatlas       529 Jan  9 05:55 boinc_task_state.xml
[2026-01-09 05:56:53] -rw------- 1 boincer umatlas      1045 Jan  9 05:55 memory_monitor_summary.json
[2026-01-09 05:56:53] -rw------- 1 boincer umatlas    394781 Jan  9 05:55 log.47898826._032350.job.log.tgz.1
[2026-01-09 05:56:53] -rw------- 1 boincer umatlas      7848 Jan  9 05:55 heartbeat.json
[2026-01-09 05:56:53] -rw------- 1 boincer umatlas        95 Jan  9 05:56 pilot_heartbeat.json
[2026-01-09 05:56:53] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 05:56 boinc_mmap_file
[2026-01-09 05:56:53] -rw-r--r-- 1 boincer umatlas        27 Jan  9 05:56 wrapper_checkpoint.txt
[2026-01-09 05:56:53] -rw------- 1 boincer umatlas      4817 Jan  9 05:56 pilotlog.txt
[2026-01-09 05:56:53] -rw------- 1 boincer umatlas    863676 Jan  9 05:56 log.47898826._032350.job.log.1
[2026-01-09 05:56:53] -rw------- 1 boincer umatlas       357 Jan  9 05:56 output.list
[2026-01-09 05:56:53] -rw-r--r-- 1 boincer umatlas       620 Jan  9 05:56 runtime_log
[2026-01-09 05:56:53] -rw------- 1 boincer umatlas   1280000 Jan  9 05:56 result.tar.gz
[2026-01-09 05:56:53] -rw------- 1 boincer umatlas       660 Jan  9 05:56 tLmKDmGzCy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTOlKDmpp09Fm.diag
[2026-01-09 05:56:53] -rw-r--r-- 1 boincer umatlas      8819 Jan  9 05:56 runtime_log.err
[2026-01-09 05:56:53] -rw-r--r-- 1 boincer umatlas     21894 Jan  9 05:56 stderr.txt
[2026-01-09 05:56:53] HITS file was successfully produced:
[2026-01-09 05:56:53] -rw------- 1 boincer umatlas 221361655 Jan  9 05:55 shared/HITS.pool.root.1
[2026-01-09 05:56:53]  *** Contents of shared directory: ***
[2026-01-09 05:56:53] total 439204
[2026-01-09 05:56:53] -rw-r--r-- 2 boincer umatlas 226484066 Jan  9 04:14 ATLAS.root_0
[2026-01-09 05:56:53] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 04:14 start_atlas.sh
[2026-01-09 05:56:53] -rw-r--r-- 2 boincer umatlas    592382 Jan  9 04:14 input.tar.gz
[2026-01-09 05:56:53] -rw------- 1 boincer umatlas 221361655 Jan  9 05:55 HITS.pool.root.1
[2026-01-09 05:56:53] -rw------- 1 boincer umatlas   1280000 Jan  9 05:56 result.tar.gz
05:56:55 (1634): run_atlas exited; CPU time 67502.698314
05:56:55 (1634): called boinc_finish(0)

</stderr_txt>
]]>

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