Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
16:08:40 (236422): wrapper (7.7.26015): starting
16:08:40 (236422): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 16:08:40] Arguments: --nthreads 4
[2026-01-09 16:08:40] Threads: 4
[2026-01-09 16:08:40] Checking for CVMFS
[2026-01-09 16:08:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:08:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:08:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:08:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:08:40] 2.13.3.0 355230 2862 57516 154956 0 188 2205778 4096001 5626 130560 0 11256345 99.998 106232 5667 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-09 16:08:40] CVMFS is ok
[2026-01-09 16:08:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 16:08:40] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-09 16:08:40] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-09 16:08:40] Further information can be found at the LHC@home message board.
[2026-01-09 16:08:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:08:40] Checking for apptainer binary...
[2026-01-09 16:08:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:08:40] Running /usr/bin/apptainer --version
[2026-01-09 16:08:40] apptainer version 1.4.5
[2026-01-09 16:08:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:08:40] X-32-ubuntu
[2026-01-09 16:08:40] apptainer works
[2026-01-09 16:08:40] Set ATHENA_PROC_NUMBER=4
[2026-01-09 16:08:40] Set ATHENA_CORE_NUMBER=4
[2026-01-09 16:08:40] Starting ATLAS job with PandaID=6963145524
[2026-01-09 16:08:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:04:11]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:04:11] 2026-01-10 00:03:11,632 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 19:04:11] 2026-01-10 00:03:11,632 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 19:04:11] 2026-01-10 00:03:11,635 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:04:11] 2026-01-10 00:03:11,635 | INFO     | sum of square deviations: 1550429070.0
[2026-01-09 19:04:11] 2026-01-10 00:03:11,636 | INFO     | sum of deviations: 26328227080.0
[2026-01-09 19:04:11] 2026-01-10 00:03:11,636 | INFO     | mean x: 1767998136.0
[2026-01-09 19:04:11] 2026-01-10 00:03:11,636 | INFO     | mean y: 2288147.076023392
[2026-01-09 19:04:11] 2026-01-10 00:03:11,636 | INFO     | intersect: -30020534116.97294
[2026-01-09 19:04:11] 2026-01-10 00:03:11,636 | INFO     | chi2: 1.456619735786902
[2026-01-09 19:04:11] 2026-01-10 00:03:11,636 | INFO     | sum of square deviations: 1418361477.5
[2026-01-09 19:04:11] 2026-01-10 00:03:11,637 | INFO     | sum of deviations: 25330940032.0
[2026-01-09 19:04:11] 2026-01-10 00:03:11,637 | INFO     | mean x: 1767997983.5
[2026-01-09 19:04:11] 2026-01-10 00:03:11,637 | INFO     | mean y: 2286995.1807228914
[2026-01-09 19:04:11] 2026-01-10 00:03:11,637 | INFO     | intersect: -31572915523.48429
[2026-01-09 19:04:11] 2026-01-10 00:03:11,638 | INFO     | chi2: 1.4577088194844754
[2026-01-09 19:04:11] 2026-01-10 00:03:11,638 | INFO     | current chi2=1.4577088194844754 (change=-0.07476788010050435 %)
[2026-01-09 19:04:11] 2026-01-10 00:03:11,638 | INFO     | right removable region: 165
[2026-01-09 19:04:11] 2026-01-10 00:03:11,638 | INFO     | sum of square deviations: 1418361477.5
[2026-01-09 19:04:11] 2026-01-10 00:03:11,639 | INFO     | sum of deviations: 3343354673.0
[2026-01-09 19:04:11] 2026-01-10 00:03:11,639 | INFO     | mean x: 1767998288.5
[2026-01-09 19:04:11] 2026-01-10 00:03:11,639 | INFO     | mean y: 2314295.8674698793
[2026-01-09 19:04:11] 2026-01-10 00:03:11,639 | INFO     | intersect: -4165202542.034296
[2026-01-09 19:04:11] 2026-01-10 00:03:11,639 | INFO     | chi2: 0.0010487003948025644
[2026-01-09 19:04:11] 2026-01-10 00:03:11,639 | INFO     | current chi2=0.0010487003948025644 (change=99.92800451833533 %)
[2026-01-09 19:04:11] 2026-01-10 00:03:11,639 | INFO     | sum of square deviations: 1294014960.0
[2026-01-09 19:04:11] 2026-01-10 00:03:11,646 | INFO     | sum of deviations: 3037158950.999999
[2026-01-09 19:04:11] 2026-01-10 00:03:11,646 | INFO     | mean x: 1767998441.0
[2026-01-09 19:04:11] 2026-01-10 00:03:11,646 | INFO     | mean y: 2314682.552795031
[2026-01-09 19:04:11] 2026-01-10 00:03:11,646 | INFO     | intersect: -4147322266.3408976
[2026-01-09 19:04:11] 2026-01-10 00:03:11,646 | INFO     | chi2: 0.0002816214610927234
[2026-01-09 19:04:11] 2026-01-10 00:03:11,646 | INFO     | current chi2=0.0002816214610927234 (change=73.14567034698757 %)
[2026-01-09 19:04:11] 2026-01-10 00:03:11,646 | INFO     | sum of square deviations: 1177156955.0
[2026-01-09 19:04:11] 2026-01-10 00:03:11,647 | INFO     | sum of deviations: 2487379676.0
[2026-01-09 19:04:11] 2026-01-10 00:03:11,647 | INFO     | mean x: 1767998593.5
[2026-01-09 19:04:11] 2026-01-10 00:03:11,647 | INFO     | mean y: 2315394.512820513
[2026-01-09 19:04:11] 2026-01-10 00:03:11,647 | INFO     | intersect: -3733536269.098584
[2026-01-09 19:04:11] 2026-01-10 00:03:11,647 | INFO     | chi2: 4.425854942613817e-05
[2026-01-09 19:04:11] 2026-01-10 00:03:11,647 | INFO     | current chi2=4.425854942613817e-05 (change=84.28438328016269 %)
[2026-01-09 19:04:11] 2026-01-10 00:03:11,647 | INFO     | sum of square deviations: 1067554900.0
[2026-01-09 19:04:11] 2026-01-10 00:03:11,648 | INFO     | sum of deviations: 2198177639.0
[2026-01-09 19:04:11] 2026-01-10 00:03:11,648 | INFO     | mean x: 1767998746.0
[2026-01-09 19:04:11] 2026-01-10 00:03:11,648 | INFO     | mean y: 2315796.8741721855
[2026-01-09 19:04:11] 2026-01-10 00:03:11,648 | INFO     | intersect: -3638129588.405068
[2026-01-09 19:04:11] 2026-01-10 00:03:11,648 | INFO     | chi2: 3.7961909318146135e-05
[2026-01-09 19:04:11] 2026-01-10 00:03:11,648 | INFO     | current chi2=3.7961909318146135e-05 (change=14.226946408400304 %)
[2026-01-09 19:04:11] 2026-01-10 00:03:11,648 | INFO     | left removable region: 40
[2026-01-09 19:04:11] 2026-01-10 00:03:11,648 | INFO     | sum of square deviations: 605592750.0
[2026-01-09 19:04:11] 2026-01-10 00:03:11,648 | INFO     | sum of deviations: 1181253043.9999995
[2026-01-09 19:04:11] 2026-01-10 00:03:11,648 | INFO     | mean x: 1767999173.0
[2026-01-09 19:04:11] 2026-01-10 00:03:11,648 | INFO     | mean y: 2316655.768
[2026-01-09 19:04:11] 2026-01-10 00:03:11,648 | INFO     | intersect: -3446295311.425682
[2026-01-09 19:04:11] 2026-01-10 00:03:11,648 | INFO     | chi2: 3.0072434866868856e-05
[2026-01-09 19:04:11] 2026-01-10 00:03:11,648 | INFO     | current memory leak: 1.95 B/s (using 125 data points, chi2=0.00)
[2026-01-09 19:04:11] 2026-01-10 00:03:11,649 | INFO     | could have reported an average CPU frequency of 3839 MHz (9 samples)
[2026-01-09 19:04:11] 2026-01-10 00:03:11,649 | INFO     | ..............................
[2026-01-09 19:04:11] 2026-01-10 00:03:11,649 | INFO     | . Timing measurements:
[2026-01-09 19:04:11] 2026-01-10 00:03:11,649 | INFO     | . get job = 0 s
[2026-01-09 19:04:11] 2026-01-10 00:03:11,649 | INFO     | . initial setup = 2 s
[2026-01-09 19:04:11] 2026-01-10 00:03:11,649 | INFO     | . payload setup = 4 s
[2026-01-09 19:04:11] 2026-01-10 00:03:11,649 | INFO     | . stage-in = 0 s
[2026-01-09 19:04:11] 2026-01-10 00:03:11,649 | INFO     | . payload execution = 10434 s
[2026-01-09 19:04:11] 2026-01-10 00:03:11,649 | INFO     | . stage-out = 0 s
[2026-01-09 19:04:11] 2026-01-10 00:03:11,649 | INFO     | . log creation = 0 s
[2026-01-09 19:04:11] 2026-01-10 00:03:11,649 | INFO     | ..............................
[2026-01-09 19:04:11] 2026-01-10 00:03:11,740 | INFO     | 
[2026-01-09 19:04:11] 2026-01-10 00:03:11,740 | INFO     | job summary report
[2026-01-09 19:04:11] 2026-01-10 00:03:11,741 | INFO     | --------------------------------------------------
[2026-01-09 19:04:11] 2026-01-10 00:03:11,741 | INFO     | PanDA job id: 6963145524
[2026-01-09 19:04:11] 2026-01-10 00:03:11,741 | INFO     | task id: 47898826
[2026-01-09 19:04:11] 2026-01-10 00:03:11,741 | INFO     | errors: (none)
[2026-01-09 19:04:11] 2026-01-10 00:03:11,741 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:04:11] 2026-01-10 00:03:11,741 | INFO     | pilot state: finished 
[2026-01-09 19:04:11] 2026-01-10 00:03:11,741 | INFO     | transexitcode: 0
[2026-01-09 19:04:11] 2026-01-10 00:03:11,741 | INFO     | exeerrorcode: 0
[2026-01-09 19:04:11] 2026-01-10 00:03:11,741 | INFO     | exeerrordiag: 
[2026-01-09 19:04:11] 2026-01-10 00:03:11,741 | INFO     | exitcode: 0
[2026-01-09 19:04:11] 2026-01-10 00:03:11,741 | INFO     | exitmsg: OK
[2026-01-09 19:04:11] 2026-01-10 00:03:11,741 | INFO     | cpuconsumptiontime: 38406 s
[2026-01-09 19:04:11] 2026-01-10 00:03:11,741 | INFO     | nevents: 400
[2026-01-09 19:04:11] 2026-01-10 00:03:11,741 | INFO     | neventsw: 0
[2026-01-09 19:04:11] 2026-01-10 00:03:11,741 | INFO     | pid: 251591
[2026-01-09 19:04:11] 2026-01-10 00:03:11,741 | INFO     | pgrp: 251591
[2026-01-09 19:04:11] 2026-01-10 00:03:11,741 | INFO     | corecount: 4
[2026-01-09 19:04:11] 2026-01-10 00:03:11,742 | INFO     | event service: False
[2026-01-09 19:04:11] 2026-01-10 00:03:11,742 | INFO     | sizes: {0: 2283969, 3: 2284231, 11: 2284259, 10442: 2322086, 10445: 2322086, 10448: 2322344}
[2026-01-09 19:04:11] 2026-01-10 00:03:11,742 | INFO     | --------------------------------------------------
[2026-01-09 19:04:11] 2026-01-10 00:03:11,742 | INFO     | 
[2026-01-09 19:04:11] 2026-01-10 00:03:11,742 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-09 19:04:11] 2026-01-10 00:03:11,760 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:04:11] 2026-01-10 00:03:11,760 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:04:11] 2026-01-10 00:03:11,760 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:04:11] 2026-01-10 00:03:11,760 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:04:11] 2026-01-10 00:03:11,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:04:11] 2026-01-10 00:03:11,760 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:04:11] 2026-01-10 00:03:11,760 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:04:11] 2026-01-10 00:03:11,760 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:04:11] 2026-01-10 00:03:11,760 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:04:11] 2026-01-10 00:03:11,761 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:04:11] 2026-01-10 00:03:11,761 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:04:11] 2026-01-10 00:03:11,761 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:04:11] 2026-01-10 00:03:11,761 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:04:11] 2026-01-10 00:03:11,761 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:04:11] 2026-01-10 00:03:11,761 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:04:11] 2026-01-10 00:03:11,761 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:04:11] 2026-01-10 00:03:11,761 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:04:11] 2026-01-10 00:03:11,761 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:04:11] 2026-01-10 00:03:11,761 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:04:11] 2026-01-10 00:03:11,761 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:04:11] 2026-01-10 00:03:11,761 | INFO     | job 6963145524 has completed (purged errors)
[2026-01-09 19:04:11] 2026-01-10 00:03:11,761 | INFO     | overall cleanup function is called
[2026-01-09 19:04:11] 2026-01-10 00:03:12,769 | INFO     | --- collectZombieJob: --- 10, [251591]
[2026-01-09 19:04:11] 2026-01-10 00:03:12,769 | INFO     | zombie collector waiting for pid 251591
[2026-01-09 19:04:11] 2026-01-10 00:03:12,769 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:04:11] 2026-01-10 00:03:12,769 | INFO     | collected zombie processes
[2026-01-09 19:04:11] 2026-01-10 00:03:12,769 | INFO     | will attempt to kill all subprocesses of pid=251591
[2026-01-09 19:04:11] 2026-01-10 00:03:12,936 | INFO     | process IDs to be killed: [251591] (in reverse order)
[2026-01-09 19:04:11] 2026-01-10 00:03:12,998 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:04:11] 2026-01-10 00:03:12,998 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:04:11] 2026-01-10 00:03:13,006 | INFO     | did not find any defunct processes belonging to 251591
[2026-01-09 19:04:11] 2026-01-10 00:03:13,011 | INFO     | did not find any defunct processes belonging to 251591
[2026-01-09 19:04:11] 2026-01-10 00:03:13,011 | INFO     | ready for new job
[2026-01-09 19:04:11] 2026-01-10 00:03:13,011 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:04:11] 2026-01-10 00:03:13,013 | INFO     | ***************************************
[2026-01-09 19:04:11] 2026-01-10 00:03:13,013 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:04:11] 2026-01-10 00:03:13,013 | INFO     | ***************************************
[2026-01-09 19:04:11] 2026-01-10 00:03:13,013 | INFO     | 
[2026-01-09 19:04:11] 2026-01-10 00:03:13,014 | INFO     | architecture information:
[2026-01-09 19:04:11] 2026-01-10 00:03:13,015 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:04:11] 2026-01-10 00:03:13,028 | INFO     | cat /etc/os-release:
[2026-01-09 19:04:11] NAME="CentOS Linux"
[2026-01-09 19:04:11] VERSION="7 (Core)"
[2026-01-09 19:04:11] ID="centos"
[2026-01-09 19:04:11] ID_LIKE="rhel fedora"
[2026-01-09 19:04:11] VERSION_ID="7"
[2026-01-09 19:04:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:04:11] ANSI_COLOR="0;31"
[2026-01-09 19:04:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:04:11] HOME_URL="https://www.centos.org/"
[2026-01-09 19:04:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:04:11] 
[2026-01-09 19:04:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:04:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:04:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:04:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:04:11] 
[2026-01-09 19:04:11] 2026-01-10 00:03:13,028 | INFO     | ***************************************
[2026-01-09 19:04:11] 2026-01-10 00:03:13,531 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-09 19:04:11] 2026-01-10 00:03:13,545 | INFO     | sufficient remaining disk space (1793318715392 B)
[2026-01-09 19:04:11] 2026-01-10 00:03:13,545 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:04:11] 2026-01-10 00:03:13,546 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:04:11] 2026-01-10 00:03:13,546 | INFO     | update_server=False
[2026-01-09 19:04:11] 2026-01-10 00:03:13,546 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:04:11] 2026-01-10 00:03:13,546 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:04:11] 2026-01-10 00:03:13,546 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:04:11] 2026-01-10 00:03:13,546 | INFO     | aborting loop
[2026-01-09 19:04:11] 2026-01-10 00:03:13,713 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:04:11] 2026-01-10 00:03:13,975 | INFO     | all data control threads have been joined
[2026-01-09 19:04:11] 2026-01-10 00:03:14,339 | INFO     | all payload control threads have been joined
[2026-01-09 19:04:11] 2026-01-10 00:03:14,551 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:04:11] 2026-01-10 00:03:14,551 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:04:11] 2026-01-10 00:03:14,551 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:04:11] 2026-01-10 00:03:14,624 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:04:11] 2026-01-10 00:03:14,630 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:04:11] 2026-01-10 00:03:14,781 | INFO     | all job control threads have been joined
[2026-01-09 19:04:11] 2026-01-10 00:03:14,810 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:04:11] 2026-01-10 00:03:14,860 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:04:11] 2026-01-10 00:03:14,981 | INFO     | [data] control thread has finished
[2026-01-09 19:04:11] 2026-01-10 00:03:15,070 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:04:11] 2026-01-10 00:03:15,193 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:04:11] 2026-01-10 00:03:15,344 | INFO     | [payload] control thread has finished
[2026-01-09 19:04:11] 2026-01-10 00:03:15,718 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:04:11] 2026-01-10 00:03:15,735 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:04:11] 2026-01-10 00:03:15,786 | INFO     | [job] control thread has finished
[2026-01-09 19:04:11] 2026-01-10 00:03:16,012 | INFO     | [job] validate thread has finished
[2026-01-09 19:04:11] 2026-01-10 00:03:18,816 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:04:11] 2026-01-10 00:03:24,575 | INFO     | job.realtimelogging is not enabled
[2026-01-09 19:04:11] 2026-01-10 00:03:25,577 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:04:11] 2026-01-10 00:03:44,597 | INFO     | PID=240284 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 19:04:11] 2026-01-10 00:03:44,597 | INFO     | .. there are 8 such processes running
[2026-01-09 19:04:11] 2026-01-10 00:03:44,598 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:04:11] 2026-01-10 00:03:44,598 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:04:11] 2026-01-10 00:03:44,598 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:04:11] 2026-01-10 00:04:05,935 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:04:11] 2026-01-10 00:04:06,701 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135476151646016)>', '<ExcThread(monitor, started 135475658475264)>']
[2026-01-09 19:04:11] 2026-01-10 00:04:07,706 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:04:11] 2026-01-10 00:04:07,706 | INFO     | [monitor] control thread has ended
[2026-01-09 19:04:11] 2026-01-10 00:04:11,715 | INFO     | all workflow threads have been joined
[2026-01-09 19:04:11] 2026-01-10 00:04:11,715 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:04:11] 2026-01-10 00:04:11,715 | INFO     | traces error code: 0
[2026-01-09 19:04:11] 2026-01-10 00:04:11,715 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:04:11] 2026-01-10 00:04:11,800 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:04:11] 2026-01-10 00:04:11,803 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:04:11] 2026-01-10 00:04:11,805 [wrapper] pilotpid: 240284
[2026-01-09 19:04:11] 2026-01-10 00:04:11,807 [wrapper] Pilot exit status: 0
[2026-01-09 19:04:11] 2026-01-10 00:04:11,815 [wrapper] pandaids: 6963145524
[2026-01-09 19:04:11] 2026-01-10 00:04:11,855 [wrapper] cleanup supervisor_pilot  445155 240285
[2026-01-09 19:04:11] 2026-01-10 00:04:11,857 [wrapper] Test setup, not cleaning
[2026-01-09 19:04:11] 2026-01-10 00:04:11,859 [wrapper] apfmon messages muted
[2026-01-09 19:04:11] 2026-01-10 00:04:11,862 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:04:11] 2026-01-10 00:04:11,863 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:04:11]  *** Error codes and diagnostics ***
[2026-01-09 19:04:11]     "exeErrorCode": 0,
[2026-01-09 19:04:11]     "exeErrorDiag": "",
[2026-01-09 19:04:11]     "pilotErrorCode": 0,
[2026-01-09 19:04:11]     "pilotErrorDiag": "",
[2026-01-09 19:04:11]  *** Listing of results directory ***
[2026-01-09 19:04:11] total 441336
[2026-01-09 19:04:11] -rw-r--r-- 1 boinc boinc    579449 Jan  8 10:02 pilot3.tar.gz
[2026-01-09 19:04:11] -rwx------ 1 boinc boinc     36322 Jan  8 10:05 runpilot2-wrapper.sh
[2026-01-09 19:04:11] -rw-r--r-- 1 boinc boinc      5112 Jan  8 10:07 queuedata.json
[2026-01-09 19:04:11] -rw-r--r-- 1 boinc boinc       100 Jan  9 16:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:04:11] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 16:08 run_atlas
[2026-01-09 19:04:11] -rw-r--r-- 1 boinc boinc       105 Jan  9 16:08 job.xml
[2026-01-09 19:04:11] -rw-r--r-- 2 boinc boinc 226378105 Jan  9 16:08 EVNT.47898824._000351.pool.root.1
[2026-01-09 19:04:11] drwxrwx--x 2 boinc boinc      4096 Jan  9 16:08 shared
[2026-01-09 19:04:11] -rw-r--r-- 2 boinc boinc    592397 Jan  9 16:08 input.tar.gz
[2026-01-09 19:04:11] -rw-r--r-- 1 boinc boinc      9667 Jan  9 16:08 init_data.xml
[2026-01-09 19:04:11] -rw-r--r-- 2 boinc boinc     15847 Jan  9 16:08 start_atlas.sh
[2026-01-09 19:04:11] -rw-r--r-- 1 boinc boinc         0 Jan  9 16:08 boinc_lockfile
[2026-01-09 19:04:11] -rw-r--r-- 1 boinc boinc      2519 Jan  9 16:08 pandaJob.out
[2026-01-09 19:04:11] -rw------- 1 boinc boinc    989381 Jan  9 16:08 agis_schedconf.cvmfs.json
[2026-01-09 19:04:11] -rw------- 1 boinc boinc   1516240 Jan  9 16:08 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:04:11] drwx------ 5 boinc boinc      4096 Jan  9 16:08 pilot3
[2026-01-09 19:04:11] -rw-r--r-- 1 boinc boinc       530 Jan  9 19:02 boinc_task_state.xml
[2026-01-09 19:04:11] -rw------- 1 boinc boinc 217939345 Jan  9 19:02 HITS.47898826._026207.pool.root.1
[2026-01-09 19:04:11] -rw------- 1 boinc boinc      1025 Jan  9 19:03 memory_monitor_summary.json
[2026-01-09 19:04:11] -rw------- 1 boinc boinc    353876 Jan  9 19:03 log.47898826._026207.job.log.tgz.1
[2026-01-09 19:04:11] -rw------- 1 boinc boinc      7744 Jan  9 19:03 heartbeat.json
[2026-01-09 19:04:11] -rw------- 1 boinc boinc        95 Jan  9 19:03 pilot_heartbeat.json
[2026-01-09 19:04:11] -rw-r--r-- 1 boinc boinc      8192 Jan  9 19:04 boinc_mmap_file
[2026-01-09 19:04:11] -rw-r--r-- 1 boinc boinc        28 Jan  9 19:04 wrapper_checkpoint.txt
[2026-01-09 19:04:11] -rw------- 1 boinc boinc      4896 Jan  9 19:04 pilotlog.txt
[2026-01-09 19:04:11] -rw------- 1 boinc boinc   1491573 Jan  9 19:04 log.47898826._026207.job.log.1
[2026-01-09 19:04:11] -rw------- 1 boinc boinc       357 Jan  9 19:04 output.list
[2026-01-09 19:04:11] -rw-r--r-- 1 boinc boinc       620 Jan  9 19:04 runtime_log
[2026-01-09 19:04:11] -rw------- 1 boinc boinc   1863680 Jan  9 19:04 result.tar.gz
[2026-01-09 19:04:11] -rw------- 1 boinc boinc       648 Jan  9 19:04 tDdKDmCl6x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpjkKDmV5BlWm.diag
[2026-01-09 19:04:11] -rw-r--r-- 1 boinc boinc      8786 Jan  9 19:04 runtime_log.err
[2026-01-09 19:04:11] -rw-r--r-- 1 boinc boinc     20925 Jan  9 19:04 stderr.txt
[2026-01-09 19:04:11] HITS file was successfully produced:
[2026-01-09 19:04:11] -rw------- 1 boinc boinc 217939345 Jan  9 19:02 shared/HITS.pool.root.1
[2026-01-09 19:04:11]  *** Contents of shared directory: ***
[2026-01-09 19:04:11] total 436332
[2026-01-09 19:04:11] -rw-r--r-- 2 boinc boinc 226378105 Jan  9 16:08 ATLAS.root_0
[2026-01-09 19:04:11] -rw-r--r-- 2 boinc boinc    592397 Jan  9 16:08 input.tar.gz
[2026-01-09 19:04:11] -rw-r--r-- 2 boinc boinc     15847 Jan  9 16:08 start_atlas.sh
[2026-01-09 19:04:11] -rw------- 1 boinc boinc 217939345 Jan  9 19:02 HITS.pool.root.1
[2026-01-09 19:04:11] -rw------- 1 boinc boinc   1863680 Jan  9 19:04 result.tar.gz
19:04:13 (236422): run_atlas exited; CPU time 38562.015497
19:04:13 (236422): called boinc_finish(0)

</stderr_txt>
]]>

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