Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:20:30 (1728): wrapper (7.7.26015): starting
04:20:30 (1728): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 04:20:30] Arguments: --nthreads 8
[2026-01-09 04:20:30] Threads: 8
[2026-01-09 04:20:30] Checking for CVMFS
[2026-01-09 04:20:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 04:20:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 04:20:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 04:20:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 04:20:31] 2.11.2.0 2466 180842 138480 154938 3 56 11754409 18432001 1833 130560 0 118586406 99.979 7125343 30208 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 04:20:31] CVMFS is ok
[2026-01-09 04:20:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 04:20:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 04:20:31] Further information can be found at the LHC@home message board.
[2026-01-09 04:20:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 04:20:31] Checking for apptainer binary...
[2026-01-09 04:20:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 04:20:31] Running /usr/bin/apptainer --version
[2026-01-09 04:20:31] apptainer version 1.3.2-1.el7
[2026-01-09 04:20:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 04:20:32] c-206-20.aglt2.org
[2026-01-09 04:20:32] apptainer works
[2026-01-09 04:20:32] Set ATHENA_PROC_NUMBER=8
[2026-01-09 04:20:32] Set ATHENA_CORE_NUMBER=8
[2026-01-09 04:20:32] Starting ATLAS job with PandaID=6963144960
[2026-01-09 04:20:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 08:37:13]  *** The last 200 lines of the pilot log: ***
[2026-01-09 08:37:13] 2026-01-09 13:36:11,659 | INFO     | executing command: lscpu
[2026-01-09 08:37:13] 2026-01-09 13:36:11,689 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 08:37:13] 2026-01-09 13:36:11,922 | INFO     | monitor loop #1105: job 0:6963144960 is in state 'finished'
[2026-01-09 08:37:13] 2026-01-09 13:36:11,922 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 08:37:13] 2026-01-09 13:36:12,605 | INFO     | time since job start (15330s) is within the limit (349056.0s)
[2026-01-09 08:37:13] 2026-01-09 13:36:14,425 | INFO     | monitor loop #1106: job 0:6963144960 is in state 'finished'
[2026-01-09 08:37:13] 2026-01-09 13:36:14,425 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 08:37:13] 2026-01-09 13:36:14,610 | INFO     | time since job start (15332s) is within the limit (349056.0s)
[2026-01-09 08:37:13] 2026-01-09 13:36:15,721 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 08:37:13] 2026-01-09 13:36:15,753 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2538.875
[2026-01-09 08:37:13] 2026-01-09 13:36:15,758 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6963144960/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 08:37:13] 2026-01-09 13:36:15,758 | INFO     | extracted standard info from prmon json
[2026-01-09 08:37:13] 2026-01-09 13:36:15,759 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:37:13] 2026-01-09 13:36:15,759 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:37:13] 2026-01-09 13:36:15,759 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:37:13] 2026-01-09 13:36:15,759 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:37:13] 2026-01-09 13:36:15,767 | INFO     | fitting pss+swap vs Time
[2026-01-09 08:37:13] 2026-01-09 13:36:15,768 | INFO     | sum of square deviations: 4903347750.0
[2026-01-09 08:37:13] 2026-01-09 13:36:15,770 | INFO     | sum of deviations: -20251308260.000015
[2026-01-09 08:37:13] 2026-01-09 13:36:15,770 | INFO     | mean x: 1767958092.0
[2026-01-09 08:37:13] 2026-01-09 13:36:15,771 | INFO     | mean y: 2514144.28685259
[2026-01-09 08:37:13] 2026-01-09 13:36:15,771 | INFO     | intersect: 7304354873.787114
[2026-01-09 08:37:13] 2026-01-09 13:36:15,771 | INFO     | chi2: 1.5529143028554686
[2026-01-09 08:37:13] 2026-01-09 13:36:15,772 | INFO     | sum of square deviations: 4616114457.5
[2026-01-09 08:37:13] 2026-01-09 13:36:15,774 | INFO     | sum of deviations: -19620869539.0
[2026-01-09 08:37:13] 2026-01-09 13:36:15,775 | INFO     | mean x: 1767957939.5
[2026-01-09 08:37:13] 2026-01-09 13:36:15,775 | INFO     | mean y: 2514479.0162601625
[2026-01-09 08:37:13] 2026-01-09 13:36:15,775 | INFO     | intersect: 7517248439.95786
[2026-01-09 08:37:13] 2026-01-09 13:36:15,775 | INFO     | chi2: 1.5520310623323135
[2026-01-09 08:37:13] 2026-01-09 13:36:15,776 | INFO     | current chi2=1.5520310623323135 (change=0.05687632096188774 %)
[2026-01-09 08:37:13] 2026-01-09 13:36:15,776 | INFO     | right removable region: 245
[2026-01-09 08:37:13] 2026-01-09 13:36:15,776 | INFO     | sum of square deviations: 4616114457.5
[2026-01-09 08:37:13] 2026-01-09 13:36:15,779 | INFO     | sum of deviations: -56591236895.0
[2026-01-09 08:37:13] 2026-01-09 13:36:15,779 | INFO     | mean x: 1767958244.5
[2026-01-09 08:37:13] 2026-01-09 13:36:15,779 | INFO     | mean y: 2533254.9430894307
[2026-01-09 08:37:13] 2026-01-09 13:36:15,779 | INFO     | intersect: 21676810345.800476
[2026-01-09 08:37:13] 2026-01-09 13:36:15,780 | INFO     | chi2: 0.16879997104503502
[2026-01-09 08:37:13] 2026-01-09 13:36:15,780 | INFO     | current chi2=0.16879997104503502 (change=89.13011679172193 %)
[2026-01-09 08:37:13] 2026-01-09 13:36:15,781 | INFO     | sum of square deviations: 4340323240.0
[2026-01-09 08:37:13] 2026-01-09 13:36:15,783 | INFO     | sum of deviations: -54911540407.0
[2026-01-09 08:37:13] 2026-01-09 13:36:15,783 | INFO     | mean x: 1767958397.0
[2026-01-09 08:37:13] 2026-01-09 13:36:15,783 | INFO     | mean y: 2532296.0290456433
[2026-01-09 08:37:13] 2026-01-09 13:36:15,783 | INFO     | intersect: 22369833896.9947
[2026-01-09 08:37:13] 2026-01-09 13:36:15,784 | INFO     | chi2: 0.1526231709007838
[2026-01-09 08:37:13] 2026-01-09 13:36:15,784 | INFO     | current chi2=0.1526231709007838 (change=9.583414051614572 %)
[2026-01-09 08:37:13] 2026-01-09 13:36:15,784 | INFO     | left removable region: 20
[2026-01-09 08:37:13] 2026-01-09 13:36:15,785 | INFO     | sum of square deviations: 3531973200.0
[2026-01-09 08:37:13] 2026-01-09 13:36:15,787 | INFO     | sum of deviations: -38628833282.00002
[2026-01-09 08:37:13] 2026-01-09 13:36:15,787 | INFO     | mean x: 1767958519.0
[2026-01-09 08:37:13] 2026-01-09 13:36:15,787 | INFO     | mean y: 2524016.4133333336
[2026-01-09 08:37:13] 2026-01-09 13:36:15,787 | INFO     | intersect: 19338507335.862835
[2026-01-09 08:37:13] 2026-01-09 13:36:15,788 | INFO     | chi2: 0.12654677596584213
[2026-01-09 08:37:13] 2026-01-09 13:36:15,788 | INFO     | current memory leak: -10.94 B/s (using 225 data points, chi2=0.13)
[2026-01-09 08:37:13] 2026-01-09 13:36:15,789 | INFO     | could have reported an average CPU frequency of 2573 MHz (12 samples)
[2026-01-09 08:37:13] 2026-01-09 13:36:15,789 | INFO     | ..............................
[2026-01-09 08:37:13] 2026-01-09 13:36:15,789 | INFO     | . Timing measurements:
[2026-01-09 08:37:13] 2026-01-09 13:36:15,789 | INFO     | . get job = 0 s
[2026-01-09 08:37:13] 2026-01-09 13:36:15,790 | INFO     | . initial setup = 2 s
[2026-01-09 08:37:13] 2026-01-09 13:36:15,790 | INFO     | . payload setup = 4 s
[2026-01-09 08:37:13] 2026-01-09 13:36:15,790 | INFO     | . stage-in = 0 s
[2026-01-09 08:37:13] 2026-01-09 13:36:15,790 | INFO     | . payload execution = 15299 s
[2026-01-09 08:37:13] 2026-01-09 13:36:15,790 | INFO     | . stage-out = 2 s
[2026-01-09 08:37:13] 2026-01-09 13:36:15,790 | INFO     | . log creation = 0 s
[2026-01-09 08:37:13] 2026-01-09 13:36:15,791 | INFO     | ..............................
[2026-01-09 08:37:13] 2026-01-09 13:36:15,876 | INFO     | 
[2026-01-09 08:37:13] 2026-01-09 13:36:15,876 | INFO     | job summary report
[2026-01-09 08:37:13] 2026-01-09 13:36:15,876 | INFO     | --------------------------------------------------
[2026-01-09 08:37:13] 2026-01-09 13:36:15,876 | INFO     | PanDA job id: 6963144960
[2026-01-09 08:37:13] 2026-01-09 13:36:15,876 | INFO     | task id: 47898826
[2026-01-09 08:37:13] 2026-01-09 13:36:15,876 | INFO     | errors: (none)
[2026-01-09 08:37:13] 2026-01-09 13:36:15,877 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 08:37:13] 2026-01-09 13:36:15,877 | INFO     | pilot state: finished 
[2026-01-09 08:37:13] 2026-01-09 13:36:15,877 | INFO     | transexitcode: 0
[2026-01-09 08:37:13] 2026-01-09 13:36:15,877 | INFO     | exeerrorcode: 0
[2026-01-09 08:37:13] 2026-01-09 13:36:15,877 | INFO     | exeerrordiag: 
[2026-01-09 08:37:13] 2026-01-09 13:36:15,877 | INFO     | exitcode: 0
[2026-01-09 08:37:13] 2026-01-09 13:36:15,877 | INFO     | exitmsg: OK
[2026-01-09 08:37:13] 2026-01-09 13:36:15,877 | INFO     | cpuconsumptiontime: 117486 s
[2026-01-09 08:37:13] 2026-01-09 13:36:15,877 | INFO     | nevents: 400
[2026-01-09 08:37:13] 2026-01-09 13:36:15,877 | INFO     | neventsw: 0
[2026-01-09 08:37:13] 2026-01-09 13:36:15,878 | INFO     | pid: 11940
[2026-01-09 08:37:13] 2026-01-09 13:36:15,878 | INFO     | pgrp: 11940
[2026-01-09 08:37:13] 2026-01-09 13:36:15,878 | INFO     | corecount: 8
[2026-01-09 08:37:13] 2026-01-09 13:36:15,878 | INFO     | event service: False
[2026-01-09 08:37:13] 2026-01-09 13:36:15,878 | INFO     | sizes: {0: 2283798, 1: 2283997, 4: 2284259, 12: 2284287, 15308: 2315415, 15311: 2324413, 15314: 2324597, 15318: 2324791}
[2026-01-09 08:37:13] 2026-01-09 13:36:15,878 | INFO     | --------------------------------------------------
[2026-01-09 08:37:13] 2026-01-09 13:36:15,878 | INFO     | 
[2026-01-09 08:37:13] 2026-01-09 13:36:15,878 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 08:37:13] 2026-01-09 13:36:15,890 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 08:37:13] 2026-01-09 13:36:15,891 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 08:37:13] 2026-01-09 13:36:15,891 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 08:37:13] 2026-01-09 13:36:15,891 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 08:37:13] 2026-01-09 13:36:15,891 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 08:37:13] 2026-01-09 13:36:15,891 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 08:37:13] 2026-01-09 13:36:15,891 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 08:37:13] 2026-01-09 13:36:15,891 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 08:37:13] 2026-01-09 13:36:15,891 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 08:37:13] 2026-01-09 13:36:15,892 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 08:37:13] 2026-01-09 13:36:15,892 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 08:37:13] 2026-01-09 13:36:15,892 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 08:37:13] 2026-01-09 13:36:15,892 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 08:37:13] 2026-01-09 13:36:15,892 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 08:37:13] 2026-01-09 13:36:15,892 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 08:37:13] 2026-01-09 13:36:15,892 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 08:37:13] 2026-01-09 13:36:15,892 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 08:37:13] 2026-01-09 13:36:15,892 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 08:37:13] 2026-01-09 13:36:15,893 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 08:37:13] 2026-01-09 13:36:15,893 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 08:37:13] 2026-01-09 13:36:15,893 | INFO     | job 6963144960 has completed (purged errors)
[2026-01-09 08:37:13] 2026-01-09 13:36:15,893 | INFO     | overall cleanup function is called
[2026-01-09 08:37:13] 2026-01-09 13:36:16,901 | INFO     | --- collectZombieJob: --- 10, [11940]
[2026-01-09 08:37:13] 2026-01-09 13:36:16,901 | INFO     | zombie collector waiting for pid 11940
[2026-01-09 08:37:13] 2026-01-09 13:36:16,901 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 08:37:13] 2026-01-09 13:36:16,901 | INFO     | collected zombie processes
[2026-01-09 08:37:13] 2026-01-09 13:36:16,901 | INFO     | will attempt to kill all subprocesses of pid=11940
[2026-01-09 08:37:13] 2026-01-09 13:36:17,061 | INFO     | process IDs to be killed: [11940] (in reverse order)
[2026-01-09 08:37:13] 2026-01-09 13:36:17,099 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 08:37:13] 2026-01-09 13:36:17,099 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 08:37:13] 2026-01-09 13:36:17,102 | INFO     | did not find any defunct processes belonging to 11940
[2026-01-09 08:37:13] 2026-01-09 13:36:17,105 | INFO     | did not find any defunct processes belonging to 11940
[2026-01-09 08:37:13] 2026-01-09 13:36:17,105 | INFO     | ready for new job
[2026-01-09 08:37:13] 2026-01-09 13:36:17,105 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 08:37:13] 2026-01-09 13:36:17,106 | INFO     | ***************************************
[2026-01-09 08:37:13] 2026-01-09 13:36:17,107 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 08:37:13] 2026-01-09 13:36:17,107 | INFO     | ***************************************
[2026-01-09 08:37:13] 2026-01-09 13:36:17,107 | INFO     | 
[2026-01-09 08:37:13] 2026-01-09 13:36:17,108 | INFO     | architecture information:
[2026-01-09 08:37:13] 2026-01-09 13:36:17,108 | INFO     | executing command: cat /etc/os-release
[2026-01-09 08:37:13] 2026-01-09 13:36:17,117 | INFO     | cat /etc/os-release:
[2026-01-09 08:37:13] NAME="CentOS Linux"
[2026-01-09 08:37:13] VERSION="7 (Core)"
[2026-01-09 08:37:13] ID="centos"
[2026-01-09 08:37:13] ID_LIKE="rhel fedora"
[2026-01-09 08:37:13] VERSION_ID="7"
[2026-01-09 08:37:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 08:37:13] ANSI_COLOR="0;31"
[2026-01-09 08:37:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 08:37:13] HOME_URL="https://www.centos.org/"
[2026-01-09 08:37:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 08:37:13] 
[2026-01-09 08:37:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 08:37:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 08:37:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 08:37:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 08:37:13] 
[2026-01-09 08:37:13] 2026-01-09 13:36:17,117 | INFO     | ***************************************
[2026-01-09 08:37:13] 2026-01-09 13:36:17,620 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 08:37:13] 2026-01-09 13:36:17,633 | INFO     | sufficient remaining disk space (27906801664 B)
[2026-01-09 08:37:13] 2026-01-09 13:36:17,633 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 08:37:13] 2026-01-09 13:36:17,633 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 08:37:13] 2026-01-09 13:36:17,634 | INFO     | update_server=False
[2026-01-09 08:37:13] 2026-01-09 13:36:17,634 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 08:37:13] 2026-01-09 13:36:17,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:37:13] 2026-01-09 13:36:17,634 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 08:37:13] 2026-01-09 13:36:17,933 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:37:13] 2026-01-09 13:36:17,933 | INFO     | aborting loop
[2026-01-09 08:37:13] 2026-01-09 13:36:17,991 | INFO     | all payload control threads have been joined
[2026-01-09 08:37:13] 2026-01-09 13:36:18,285 | INFO     | all data control threads have been joined
[2026-01-09 08:37:13] 2026-01-09 13:36:18,640 | INFO     | [job] queue monitor thread has finished
[2026-01-09 08:37:13] 2026-01-09 13:36:18,641 | INFO     | [job] retrieve thread has finished
[2026-01-09 08:37:13] 2026-01-09 13:36:18,759 | INFO     | [job] validate thread has finished
[2026-01-09 08:37:13] 2026-01-09 13:36:18,803 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 08:37:13] 2026-01-09 13:36:18,826 | INFO     | [payload] failed_post thread has finished
[2026-01-09 08:37:13] 2026-01-09 13:36:18,938 | INFO     | [job] job monitor thread has finished
[2026-01-09 08:37:13] 2026-01-09 13:36:18,987 | INFO     | all job control threads have been joined
[2026-01-09 08:37:13] 2026-01-09 13:36:18,996 | INFO     | [payload] control thread has finished
[2026-01-09 08:37:13] 2026-01-09 13:36:19,024 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 08:37:13] 2026-01-09 13:36:19,107 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 08:37:13] 2026-01-09 13:36:19,131 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 08:37:13] 2026-01-09 13:36:19,160 | INFO     | [data] copytool_in thread has finished
[2026-01-09 08:37:13] 2026-01-09 13:36:19,290 | INFO     | [data] control thread has finished
[2026-01-09 08:37:13] 2026-01-09 13:36:19,940 | INFO     | [payload] validate_post thread has finished
[2026-01-09 08:37:13] 2026-01-09 13:36:19,992 | INFO     | [job] control thread has finished
[2026-01-09 08:37:13] 2026-01-09 13:36:21,136 | INFO     | [data] copytool_out thread has finished
[2026-01-09 08:37:13] 2026-01-09 13:36:21,642 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 08:37:13] 2026-01-09 13:36:28,003 | INFO     | job.realtimelogging is not enabled
[2026-01-09 08:37:13] 2026-01-09 13:36:29,008 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 08:37:13] 2026-01-09 13:36:47,791 | INFO     | PID=5495 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 08:37:13] 2026-01-09 13:36:47,791 | INFO     | .. there are 3 such processes running
[2026-01-09 08:37:13] 2026-01-09 13:36:47,791 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 08:37:13] 2026-01-09 13:36:47,791 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 08:37:13] 2026-01-09 13:36:47,792 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 08:37:13] 2026-01-09 13:37:07,283 | INFO     | [monitor] cgroup control has ended
[2026-01-09 08:37:13] 2026-01-09 13:37:08,287 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140103434925888)>', '<ExcThread(monitor, started 140103133406976)>']
[2026-01-09 08:37:13] 2026-01-09 13:37:08,891 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 08:37:13] 2026-01-09 13:37:08,891 | INFO     | [monitor] control thread has ended
[2026-01-09 08:37:13] 2026-01-09 13:37:13,326 | INFO     | all workflow threads have been joined
[2026-01-09 08:37:13] 2026-01-09 13:37:13,336 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 08:37:13] 2026-01-09 13:37:13,337 | INFO     | traces error code: 0
[2026-01-09 08:37:13] 2026-01-09 13:37:13,337 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 08:37:13] 2026-01-09 13:37:13,437 [wrapper] ==== pilot stdout END ====
[2026-01-09 08:37:13] 2026-01-09 13:37:13,439 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 08:37:13] 2026-01-09 13:37:13,441 [wrapper] pilotpid: 5495
[2026-01-09 08:37:13] 2026-01-09 13:37:13,443 [wrapper] Pilot exit status: 0
[2026-01-09 08:37:13] 2026-01-09 13:37:13,458 [wrapper] pandaids: 6963144960
[2026-01-09 08:37:13] 2026-01-09 13:37:13,486 [wrapper] cleanup supervisor_pilot  2504 5496
[2026-01-09 08:37:13] 2026-01-09 13:37:13,488 [wrapper] Test setup, not cleaning
[2026-01-09 08:37:13] 2026-01-09 13:37:13,490 [wrapper] apfmon messages muted
[2026-01-09 08:37:13] 2026-01-09 13:37:13,492 [wrapper] ==== wrapper stdout END ====
[2026-01-09 08:37:13] 2026-01-09 13:37:13,494 [wrapper] ==== wrapper stderr END ====
[2026-01-09 08:37:13]  *** Error codes and diagnostics ***
[2026-01-09 08:37:13]     "exeErrorCode": 0,
[2026-01-09 08:37:13]     "exeErrorDiag": "",
[2026-01-09 08:37:13]     "pilotErrorCode": 0,
[2026-01-09 08:37:13]     "pilotErrorDiag": "",
[2026-01-09 08:37:13]  *** Listing of results directory ***
[2026-01-09 08:37:13] total 448084
[2026-01-09 08:37:13] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 10:02 pilot3.tar.gz
[2026-01-09 08:37:13] -rwx------ 1 boincer umatlas     36322 Jan  8 10:05 runpilot2-wrapper.sh
[2026-01-09 08:37:13] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 10:06 queuedata.json
[2026-01-09 08:37:13] -rw-r--r-- 1 boincer umatlas       100 Jan  9 04:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 08:37:13] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 04:20 run_atlas
[2026-01-09 08:37:13] -rw-r--r-- 1 boincer umatlas       105 Jan  9 04:20 job.xml
[2026-01-09 08:37:13] -rw-r--r-- 2 boincer umatlas 227074352 Jan  9 04:20 EVNT.47898824._001039.pool.root.1
[2026-01-09 08:37:13] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 04:20 start_atlas.sh
[2026-01-09 08:37:13] drwxrwx--x 2 boincer umatlas      4096 Jan  9 04:20 shared
[2026-01-09 08:37:13] -rw-r--r-- 2 boincer umatlas    592403 Jan  9 04:20 input.tar.gz
[2026-01-09 08:37:13] -rw-r--r-- 1 boincer umatlas         0 Jan  9 04:20 boinc_lockfile
[2026-01-09 08:37:13] -rw-r--r-- 1 boincer umatlas      2519 Jan  9 04:20 pandaJob.out
[2026-01-09 08:37:13] -rw------- 1 boincer umatlas        57 Jan  9 04:20 setup.sh.local
[2026-01-09 08:37:13] -rw------- 1 boincer umatlas    989751 Jan  9 04:20 agis_schedconf.cvmfs.json
[2026-01-09 08:37:13] drwx------ 5 boincer umatlas      4096 Jan  9 04:20 pilot3
[2026-01-09 08:37:13] -rw------- 1 boincer umatlas 222598062 Jan  9 08:35 HITS.47898826._025940.pool.root.1
[2026-01-09 08:37:13] -rw-r--r-- 1 boincer umatlas       531 Jan  9 08:35 boinc_task_state.xml
[2026-01-09 08:37:13] -rw------- 1 boincer umatlas        95 Jan  9 08:36 pilot_heartbeat.json
[2026-01-09 08:37:13] -rw------- 1 boincer umatlas      1054 Jan  9 08:36 memory_monitor_summary.json
[2026-01-09 08:37:13] -rw------- 1 boincer umatlas   1516240 Jan  9 08:36 agis_ddmendpoints.agis.ALL.json
[2026-01-09 08:37:13] -rw------- 1 boincer umatlas    491787 Jan  9 08:36 log.47898826._025940.job.log.tgz.1
[2026-01-09 08:37:13] -rw------- 1 boincer umatlas      7864 Jan  9 08:36 heartbeat.json
[2026-01-09 08:37:13] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 08:36 init_data.xml
[2026-01-09 08:37:13] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 08:36 boinc_mmap_file
[2026-01-09 08:37:13] -rw-r--r-- 1 boincer umatlas        29 Jan  9 08:36 wrapper_checkpoint.txt
[2026-01-09 08:37:13] -rw------- 1 boincer umatlas      4892 Jan  9 08:37 pilotlog.txt
[2026-01-09 08:37:13] -rw------- 1 boincer umatlas   2133362 Jan  9 08:37 log.47898826._025940.job.log.1
[2026-01-09 08:37:13] -rw------- 1 boincer umatlas       357 Jan  9 08:37 output.list
[2026-01-09 08:37:13] -rw-r--r-- 1 boincer umatlas       620 Jan  9 08:37 runtime_log
[2026-01-09 08:37:13] -rw------- 1 boincer umatlas   2641920 Jan  9 08:37 result.tar.gz
[2026-01-09 08:37:13] -rw-r--r-- 1 boincer umatlas      9343 Jan  9 08:37 runtime_log.err
[2026-01-09 08:37:13] -rw------- 1 boincer umatlas       663 Jan  9 08:37 FkCNDm0k6x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLjkKDmqG3KLo.diag
[2026-01-09 08:37:13] -rw-r--r-- 1 boincer umatlas     21328 Jan  9 08:37 stderr.txt
[2026-01-09 08:37:13] HITS file was successfully produced:
[2026-01-09 08:37:13] -rw------- 1 boincer umatlas 222598062 Jan  9 08:35 shared/HITS.pool.root.1
[2026-01-09 08:37:13]  *** Contents of shared directory: ***
[2026-01-09 08:37:13] total 442320
[2026-01-09 08:37:13] -rw-r--r-- 2 boincer umatlas 227074352 Jan  9 04:20 ATLAS.root_0
[2026-01-09 08:37:13] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 04:20 start_atlas.sh
[2026-01-09 08:37:13] -rw-r--r-- 2 boincer umatlas    592403 Jan  9 04:20 input.tar.gz
[2026-01-09 08:37:13] -rw------- 1 boincer umatlas 222598062 Jan  9 08:35 HITS.pool.root.1
[2026-01-09 08:37:13] -rw------- 1 boincer umatlas   2641920 Jan  9 08:37 result.tar.gz
08:37:15 (1728): run_atlas exited; CPU time 117689.375578
08:37:15 (1728): called boinc_finish(0)

</stderr_txt>
]]>

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