Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:00:46 (1776860): wrapper (7.7.26015): starting
05:00:46 (1776860): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 05:00:46] Arguments: --nthreads 9
[2026-01-09 05:00:46] Threads: 9
[2026-01-09 05:00:46] Checking for CVMFS
[2026-01-09 05:00:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 05:00:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 05:00:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 05:00:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 05:00:48] 2.13.3.0 12460 93262 228632 154938 0 786 24819337 32935936 23989 16776704 0 907126941 99.639 873612272 36059 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 05:00:48] CVMFS is ok
[2026-01-09 05:00:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 05:00:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 05:00:48] Further information can be found at the LHC@home message board.
[2026-01-09 05:00:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 05:00:48] Checking for apptainer binary...
[2026-01-09 05:00:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 05:00:48] Running /usr/bin/apptainer --version
[2026-01-09 05:00:48] apptainer version 1.4.5-2.el9
[2026-01-09 05:00:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 05:00:48] c7-6-31.aglt2.org
[2026-01-09 05:00:48] apptainer works
[2026-01-09 05:00:48] Set ATHENA_PROC_NUMBER=9
[2026-01-09 05:00:48] Set ATHENA_CORE_NUMBER=9
[2026-01-09 05:00:48] Starting ATLAS job with PandaID=6963147295
[2026-01-09 05:00:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 08:07:39]  *** The last 200 lines of the pilot log: ***
[2026-01-09 08:07:39] 2026-01-09 13:06:45,637 | INFO     | time since job start (11132s) is within the limit (349056.0s)
[2026-01-09 08:07:39] 2026-01-09 13:06:46,432 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 08:07:39] 2026-01-09 13:06:46,500 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3337.706208333333
[2026-01-09 08:07:39] 2026-01-09 13:06:46,563 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6963147295/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 08:07:39] 2026-01-09 13:06:46,564 | INFO     | extracted standard info from prmon json
[2026-01-09 08:07:39] 2026-01-09 13:06:46,564 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 08:07:39] 2026-01-09 13:06:46,564 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 08:07:39] 2026-01-09 13:06:46,568 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 08:07:39] 2026-01-09 13:06:46,568 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 08:07:39] 2026-01-09 13:06:46,571 | INFO     | fitting pss+swap vs Time
[2026-01-09 08:07:39] 2026-01-09 13:06:46,571 | INFO     | sum of square deviations: 1869302025.5
[2026-01-09 08:07:39] 2026-01-09 13:06:46,584 | INFO     | sum of deviations: -5308154852.0
[2026-01-09 08:07:39] 2026-01-09 13:06:46,584 | INFO     | mean x: 1767958445.5
[2026-01-09 08:07:39] 2026-01-09 13:06:46,584 | INFO     | mean y: 2553869.868131868
[2026-01-09 08:07:39] 2026-01-09 13:06:46,585 | INFO     | intersect: 5022928893.591232
[2026-01-09 08:07:39] 2026-01-09 13:06:46,585 | INFO     | chi2: 2.1206197261033233
[2026-01-09 08:07:39] 2026-01-09 13:06:46,585 | INFO     | sum of square deviations: 1719429448.0
[2026-01-09 08:07:39] 2026-01-09 13:06:46,586 | INFO     | sum of deviations: 7330638034.0
[2026-01-09 08:07:39] 2026-01-09 13:06:46,586 | INFO     | mean x: 1767958293.0
[2026-01-09 08:07:39] 2026-01-09 13:06:46,586 | INFO     | mean y: 2566440.7740112995
[2026-01-09 08:07:39] 2026-01-09 13:06:46,586 | INFO     | intersect: -7534970106.751442
[2026-01-09 08:07:39] 2026-01-09 13:06:46,586 | INFO     | chi2: 1.2963142099766984
[2026-01-09 08:07:39] 2026-01-09 13:06:46,587 | INFO     | current chi2=1.2963142099766984 (change=38.8709727623491 %)
[2026-01-09 08:07:39] 2026-01-09 13:06:46,587 | INFO     | sum of square deviations: 1577789583.0
[2026-01-09 08:07:39] 2026-01-09 13:06:46,588 | INFO     | sum of deviations: 6957993974.999999
[2026-01-09 08:07:39] 2026-01-09 13:06:46,588 | INFO     | mean x: 1767958140.5
[2026-01-09 08:07:39] 2026-01-09 13:06:46,588 | INFO     | mean y: 2566039.4534883723
[2026-01-09 08:07:39] 2026-01-09 13:06:46,588 | INFO     | intersect: -7794064273.101441
[2026-01-09 08:07:39] 2026-01-09 13:06:46,600 | INFO     | chi2: 1.2967586177895136
[2026-01-09 08:07:39] 2026-01-09 13:06:46,600 | INFO     | current chi2=1.2967586177895136 (change=-0.03428241466420185 %)
[2026-01-09 08:07:39] 2026-01-09 13:06:46,601 | INFO     | right removable region: 171
[2026-01-09 08:07:39] 2026-01-09 13:06:46,601 | INFO     | sum of square deviations: 1719429448.0
[2026-01-09 08:07:39] 2026-01-09 13:06:46,602 | INFO     | sum of deviations: -26548452208.0
[2026-01-09 08:07:39] 2026-01-09 13:06:46,602 | INFO     | mean x: 1767958598.0
[2026-01-09 08:07:39] 2026-01-09 13:06:46,602 | INFO     | mean y: 2575138.2994350283
[2026-01-09 08:07:39] 2026-01-09 13:06:46,602 | INFO     | intersect: 27300330448.539814
[2026-01-09 08:07:39] 2026-01-09 13:06:46,602 | INFO     | chi2: 0.9798610516281545
[2026-01-09 08:07:39] 2026-01-09 13:06:46,602 | INFO     | current chi2=0.9798610516281545 (change=53.7936462833595 %)
[2026-01-09 08:07:39] 2026-01-09 13:06:46,603 | INFO     | sum of square deviations: 1577789583.0
[2026-01-09 08:07:39] 2026-01-09 13:06:46,603 | INFO     | sum of deviations: -18357602879.5
[2026-01-09 08:07:39] 2026-01-09 13:06:46,604 | INFO     | mean x: 1767958750.5
[2026-01-09 08:07:39] 2026-01-09 13:06:46,604 | INFO     | mean y: 2566310.0290697673
[2026-01-09 08:07:39] 2026-01-09 13:06:46,604 | INFO     | intersect: 20572789994.29586
[2026-01-09 08:07:39] 2026-01-09 13:06:46,604 | INFO     | chi2: 0.93271010424345
[2026-01-09 08:07:39] 2026-01-09 13:06:46,616 | INFO     | current chi2=0.93271010424345 (change=4.812003427053013 %)
[2026-01-09 08:07:39] 2026-01-09 13:06:46,616 | INFO     | left removable region: 20
[2026-01-09 08:07:39] 2026-01-09 13:06:46,616 | INFO     | sum of square deviations: 1067554900.0
[2026-01-09 08:07:39] 2026-01-09 13:06:46,617 | INFO     | sum of deviations: 1821477995.0000005
[2026-01-09 08:07:39] 2026-01-09 13:06:46,617 | INFO     | mean x: 1767958720.0
[2026-01-09 08:07:39] 2026-01-09 13:06:46,617 | INFO     | mean y: 2569712.0529801324
[2026-01-09 08:07:39] 2026-01-09 13:06:46,617 | INFO     | intersect: -3013947662.883304
[2026-01-09 08:07:39] 2026-01-09 13:06:46,618 | INFO     | chi2: 0.00046793426593994843
[2026-01-09 08:07:39] 2026-01-09 13:06:46,618 | INFO     | current memory leak: 1.71 B/s (using 151 data points, chi2=0.00)
[2026-01-09 08:07:39] 2026-01-09 13:06:46,618 | INFO     | could have reported an average CPU frequency of 3271 MHz (10 samples)
[2026-01-09 08:07:39] 2026-01-09 13:06:46,618 | INFO     | ..............................
[2026-01-09 08:07:39] 2026-01-09 13:06:46,618 | INFO     | . Timing measurements:
[2026-01-09 08:07:39] 2026-01-09 13:06:46,619 | INFO     | . get job = 0 s
[2026-01-09 08:07:39] 2026-01-09 13:06:46,619 | INFO     | . initial setup = 2 s
[2026-01-09 08:07:39] 2026-01-09 13:06:46,619 | INFO     | . payload setup = 13 s
[2026-01-09 08:07:39] 2026-01-09 13:06:46,619 | INFO     | . stage-in = 0 s
[2026-01-09 08:07:39] 2026-01-09 13:06:46,619 | INFO     | . payload execution = 11073 s
[2026-01-09 08:07:39] 2026-01-09 13:06:46,619 | INFO     | . stage-out = 2 s
[2026-01-09 08:07:39] 2026-01-09 13:06:46,619 | INFO     | . log creation = 0 s
[2026-01-09 08:07:39] 2026-01-09 13:06:46,619 | INFO     | ..............................
[2026-01-09 08:07:39] 2026-01-09 13:06:46,754 | INFO     | 
[2026-01-09 08:07:39] 2026-01-09 13:06:46,754 | INFO     | job summary report
[2026-01-09 08:07:39] 2026-01-09 13:06:46,754 | INFO     | --------------------------------------------------
[2026-01-09 08:07:39] 2026-01-09 13:06:46,755 | INFO     | PanDA job id: 6963147295
[2026-01-09 08:07:39] 2026-01-09 13:06:46,755 | INFO     | task id: 47898826
[2026-01-09 08:07:39] 2026-01-09 13:06:46,755 | INFO     | errors: (none)
[2026-01-09 08:07:39] 2026-01-09 13:06:46,755 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 08:07:39] 2026-01-09 13:06:46,755 | INFO     | pilot state: finished 
[2026-01-09 08:07:39] 2026-01-09 13:06:46,755 | INFO     | transexitcode: 0
[2026-01-09 08:07:39] 2026-01-09 13:06:46,755 | INFO     | exeerrorcode: 0
[2026-01-09 08:07:39] 2026-01-09 13:06:46,755 | INFO     | exeerrordiag: 
[2026-01-09 08:07:39] 2026-01-09 13:06:46,755 | INFO     | exitcode: 0
[2026-01-09 08:07:39] 2026-01-09 13:06:46,755 | INFO     | exitmsg: OK
[2026-01-09 08:07:39] 2026-01-09 13:06:46,755 | INFO     | cpuconsumptiontime: 44321 s
[2026-01-09 08:07:39] 2026-01-09 13:06:46,755 | INFO     | nevents: 400
[2026-01-09 08:07:39] 2026-01-09 13:06:46,755 | INFO     | neventsw: 0
[2026-01-09 08:07:39] 2026-01-09 13:06:46,755 | INFO     | pid: 1789537
[2026-01-09 08:07:39] 2026-01-09 13:06:46,755 | INFO     | pgrp: 1789537
[2026-01-09 08:07:39] 2026-01-09 13:06:46,756 | INFO     | corecount: 9
[2026-01-09 08:07:39] 2026-01-09 13:06:46,756 | INFO     | event service: False
[2026-01-09 08:07:39] 2026-01-09 13:06:46,756 | INFO     | sizes: {0: 2283970, 1: 2283970, 11: 2283998, 13: 2284288, 22: 2284344, 11090: 2313818, 11094: 2322816, 11096: 2322872, 11104: 2323066}
[2026-01-09 08:07:39] 2026-01-09 13:06:46,756 | INFO     | --------------------------------------------------
[2026-01-09 08:07:39] 2026-01-09 13:06:46,756 | INFO     | 
[2026-01-09 08:07:39] 2026-01-09 13:06:46,756 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-09 08:07:39] 2026-01-09 13:06:46,794 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 08:07:39] 2026-01-09 13:06:46,795 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 08:07:39] 2026-01-09 13:06:46,795 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 08:07:39] 2026-01-09 13:06:46,795 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 08:07:39] 2026-01-09 13:06:46,795 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 08:07:39] 2026-01-09 13:06:46,795 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 08:07:39] 2026-01-09 13:06:46,795 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 08:07:39] 2026-01-09 13:06:46,795 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 08:07:39] 2026-01-09 13:06:46,795 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 08:07:39] 2026-01-09 13:06:46,795 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 08:07:39] 2026-01-09 13:06:46,795 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 08:07:39] 2026-01-09 13:06:46,795 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 08:07:39] 2026-01-09 13:06:46,796 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 08:07:39] 2026-01-09 13:06:46,796 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 08:07:39] 2026-01-09 13:06:46,796 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 08:07:39] 2026-01-09 13:06:46,796 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 08:07:39] 2026-01-09 13:06:46,796 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 08:07:39] 2026-01-09 13:06:46,796 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 08:07:39] 2026-01-09 13:06:46,796 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 08:07:39] 2026-01-09 13:06:46,796 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 08:07:39] 2026-01-09 13:06:46,796 | INFO     | job 6963147295 has completed (purged errors)
[2026-01-09 08:07:39] 2026-01-09 13:06:46,796 | INFO     | overall cleanup function is called
[2026-01-09 08:07:39] 2026-01-09 13:06:47,804 | INFO     | --- collectZombieJob: --- 10, [1789537]
[2026-01-09 08:07:39] 2026-01-09 13:06:47,804 | INFO     | zombie collector waiting for pid 1789537
[2026-01-09 08:07:39] 2026-01-09 13:06:47,805 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 08:07:39] 2026-01-09 13:06:47,805 | INFO     | collected zombie processes
[2026-01-09 08:07:39] 2026-01-09 13:06:47,805 | INFO     | will attempt to kill all subprocesses of pid=1789537
[2026-01-09 08:07:39] 2026-01-09 13:06:48,384 | INFO     | process IDs to be killed: [1789537] (in reverse order)
[2026-01-09 08:07:39] 2026-01-09 13:06:48,566 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 08:07:39] 2026-01-09 13:06:48,567 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 08:07:39] 2026-01-09 13:06:48,586 | INFO     | did not find any defunct processes belonging to 1789537
[2026-01-09 08:07:39] 2026-01-09 13:06:48,606 | INFO     | did not find any defunct processes belonging to 1789537
[2026-01-09 08:07:39] 2026-01-09 13:06:48,606 | INFO     | ready for new job
[2026-01-09 08:07:39] 2026-01-09 13:06:48,607 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 08:07:39] 2026-01-09 13:06:48,610 | INFO     | ***************************************
[2026-01-09 08:07:39] 2026-01-09 13:06:48,611 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 08:07:39] 2026-01-09 13:06:48,611 | INFO     | ***************************************
[2026-01-09 08:07:39] 2026-01-09 13:06:48,611 | INFO     | 
[2026-01-09 08:07:39] 2026-01-09 13:06:48,616 | INFO     | architecture information:
[2026-01-09 08:07:39] 2026-01-09 13:06:48,617 | INFO     | executing command: cat /etc/os-release
[2026-01-09 08:07:39] 2026-01-09 13:06:48,637 | INFO     | cat /etc/os-release:
[2026-01-09 08:07:39] NAME="CentOS Linux"
[2026-01-09 08:07:39] VERSION="7 (Core)"
[2026-01-09 08:07:39] ID="centos"
[2026-01-09 08:07:39] ID_LIKE="rhel fedora"
[2026-01-09 08:07:39] VERSION_ID="7"
[2026-01-09 08:07:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 08:07:39] ANSI_COLOR="0;31"
[2026-01-09 08:07:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 08:07:39] HOME_URL="https://www.centos.org/"
[2026-01-09 08:07:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 08:07:39] 
[2026-01-09 08:07:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 08:07:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 08:07:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 08:07:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 08:07:39] 
[2026-01-09 08:07:39] 2026-01-09 13:06:48,638 | INFO     | ***************************************
[2026-01-09 08:07:39] 2026-01-09 13:06:49,141 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-09 08:07:39] 2026-01-09 13:06:49,158 | INFO     | sufficient remaining disk space (73463234560 B)
[2026-01-09 08:07:39] 2026-01-09 13:06:49,159 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 08:07:39] 2026-01-09 13:06:49,159 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 08:07:39] 2026-01-09 13:06:49,159 | INFO     | update_server=False
[2026-01-09 08:07:39] 2026-01-09 13:06:49,159 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 08:07:39] 2026-01-09 13:06:49,159 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:07:39] 2026-01-09 13:06:49,159 | INFO     | aborting loop
[2026-01-09 08:07:39] 2026-01-09 13:06:49,556 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 08:07:39] 2026-01-09 13:06:49,696 | INFO     | all data control threads have been joined
[2026-01-09 08:07:39] 2026-01-09 13:06:49,839 | INFO     | all payload control threads have been joined
[2026-01-09 08:07:39] 2026-01-09 13:06:49,892 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 08:07:39] 2026-01-09 13:06:50,165 | INFO     | [job] retrieve thread has finished
[2026-01-09 08:07:39] 2026-01-09 13:06:50,166 | INFO     | [job] job monitor thread has finished
[2026-01-09 08:07:39] 2026-01-09 13:06:50,174 | INFO     | [payload] validate_post thread has finished
[2026-01-09 08:07:39] 2026-01-09 13:06:50,421 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 08:07:39] 2026-01-09 13:06:50,699 | INFO     | all job control threads have been joined
[2026-01-09 08:07:39] 2026-01-09 13:06:50,702 | INFO     | [data] control thread has finished
[2026-01-09 08:07:39] 2026-01-09 13:06:50,706 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 08:07:39] 2026-01-09 13:06:50,806 | INFO     | [data] copytool_in thread has finished
[2026-01-09 08:07:39] 2026-01-09 13:06:50,844 | INFO     | [payload] control thread has finished
[2026-01-09 08:07:39] 2026-01-09 13:06:51,032 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 08:07:39] 2026-01-09 13:06:51,342 | INFO     | [payload] failed_post thread has finished
[2026-01-09 08:07:39] 2026-01-09 13:06:51,546 | INFO     | [job] validate thread has finished
[2026-01-09 08:07:39] 2026-01-09 13:06:51,704 | INFO     | [job] control thread has finished
[2026-01-09 08:07:39] 2026-01-09 13:06:51,756 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 08:07:39] 2026-01-09 13:06:51,899 | INFO     | [data] copytool_out thread has finished
[2026-01-09 08:07:39] 2026-01-09 13:06:52,762 | INFO     | [job] queue monitor thread has finished
[2026-01-09 08:07:39] 2026-01-09 13:06:53,565 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 08:07:39] 2026-01-09 13:06:59,380 | INFO     | job.realtimelogging is not enabled
[2026-01-09 08:07:39] 2026-01-09 13:07:00,390 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 08:07:39] 2026-01-09 13:07:19,325 | INFO     | PID=1782035 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 08:07:39] 2026-01-09 13:07:19,326 | INFO     | .. there are 27 such processes running
[2026-01-09 08:07:39] 2026-01-09 13:07:19,326 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 08:07:39] 2026-01-09 13:07:19,326 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 08:07:39] 2026-01-09 13:07:19,326 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 08:07:39] 2026-01-09 13:07:31,988 | INFO     | [monitor] cgroup control has ended
[2026-01-09 08:07:39] 2026-01-09 13:07:33,939 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140091296896832)>', '<ExcThread(monitor, started 140090810554112)>']
[2026-01-09 08:07:39] 2026-01-09 13:07:34,411 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 08:07:39] 2026-01-09 13:07:34,411 | INFO     | [monitor] control thread has ended
[2026-01-09 08:07:39] 2026-01-09 13:07:38,965 | INFO     | all workflow threads have been joined
[2026-01-09 08:07:39] 2026-01-09 13:07:38,965 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 08:07:39] 2026-01-09 13:07:38,966 | INFO     | traces error code: 0
[2026-01-09 08:07:39] 2026-01-09 13:07:38,966 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 08:07:39] 2026-01-09 13:07:39,169 [wrapper] ==== pilot stdout END ====
[2026-01-09 08:07:39] 2026-01-09 13:07:39,193 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 08:07:39] 2026-01-09 13:07:39,209 [wrapper] pilotpid: 1782035
[2026-01-09 08:07:39] 2026-01-09 13:07:39,223 [wrapper] Pilot exit status: 0
[2026-01-09 08:07:39] 2026-01-09 13:07:39,308 [wrapper] pandaids: 6963147295
[2026-01-09 08:07:39] 2026-01-09 13:07:39,560 [wrapper] cleanup supervisor_pilot 2915183 1782036
[2026-01-09 08:07:39] 2026-01-09 13:07:39,571 [wrapper] Test setup, not cleaning
[2026-01-09 08:07:39] 2026-01-09 13:07:39,575 [wrapper] apfmon messages muted
[2026-01-09 08:07:39] 2026-01-09 13:07:39,577 [wrapper] ==== wrapper stdout END ====
[2026-01-09 08:07:39] 2026-01-09 13:07:39,579 [wrapper] ==== wrapper stderr END ====
[2026-01-09 08:07:39]  *** Error codes and diagnostics ***
[2026-01-09 08:07:39]     "exeErrorCode": 0,
[2026-01-09 08:07:39]     "exeErrorDiag": "",
[2026-01-09 08:07:39]     "pilotErrorCode": 0,
[2026-01-09 08:07:39]     "pilotErrorDiag": "",
[2026-01-09 08:07:39]  *** Listing of results directory ***
[2026-01-09 08:07:39] total 447200
[2026-01-09 08:07:39] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 10:02 pilot3.tar.gz
[2026-01-09 08:07:39] -rwx------. 1 boincer umatlas     36322 Jan  8 10:06 runpilot2-wrapper.sh
[2026-01-09 08:07:39] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 10:07 queuedata.json
[2026-01-09 08:07:39] -rw-r--r--. 1 boincer umatlas       100 Jan  9 05:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 08:07:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 05:00 run_atlas
[2026-01-09 08:07:39] -rw-r--r--. 1 boincer umatlas       105 Jan  9 05:00 job.xml
[2026-01-09 08:07:39] -rw-r--r--. 2 boincer umatlas 228168202 Jan  9 05:00 EVNT.47898824._001088.pool.root.1
[2026-01-09 08:07:39] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 05:00 shared
[2026-01-09 08:07:39] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 05:00 input.tar.gz
[2026-01-09 08:07:39] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 05:00 start_atlas.sh
[2026-01-09 08:07:39] -rw-r--r--. 1 boincer umatlas         0 Jan  9 05:00 boinc_lockfile
[2026-01-09 08:07:39] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 05:00 pandaJob.out
[2026-01-09 08:07:39] -rw-------. 1 boincer umatlas        57 Jan  9 05:00 setup.sh.local
[2026-01-09 08:07:39] -rw-------. 1 boincer umatlas    989751 Jan  9 05:01 agis_schedconf.cvmfs.json
[2026-01-09 08:07:39] drwx------. 5 boincer umatlas      4096 Jan  9 05:01 pilot3
[2026-01-09 08:07:39] -rw-r--r--. 1 boincer umatlas      6944 Jan  9 08:02 init_data.xml
[2026-01-09 08:07:39] -rw-r--r--. 1 boincer umatlas       530 Jan  9 08:06 boinc_task_state.xml
[2026-01-09 08:07:39] -rw-------. 1 boincer umatlas 222070545 Jan  9 08:06 HITS.47898826._027490.pool.root.1
[2026-01-09 08:07:39] -rw-------. 1 boincer umatlas      1034 Jan  9 08:06 memory_monitor_summary.json
[2026-01-09 08:07:39] -rw-------. 1 boincer umatlas   1516240 Jan  9 08:06 agis_ddmendpoints.agis.ALL.json
[2026-01-09 08:07:39] -rw-------. 1 boincer umatlas    432334 Jan  9 08:06 log.47898826._027490.job.log.tgz.1
[2026-01-09 08:07:39] -rw-------. 1 boincer umatlas      7774 Jan  9 08:06 heartbeat.json
[2026-01-09 08:07:39] -rw-------. 1 boincer umatlas        95 Jan  9 08:07 pilot_heartbeat.json
[2026-01-09 08:07:39] -rw-r--r--. 1 boincer umatlas        28 Jan  9 08:07 wrapper_checkpoint.txt
[2026-01-09 08:07:39] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 08:07 boinc_mmap_file
[2026-01-09 08:07:39] -rw-------. 1 boincer umatlas      4896 Jan  9 08:07 pilotlog.txt
[2026-01-09 08:07:39] -rw-------. 1 boincer umatlas   1455003 Jan  9 08:07 log.47898826._027490.job.log.1
[2026-01-09 08:07:39] -rw-------. 1 boincer umatlas       357 Jan  9 08:07 output.list
[2026-01-09 08:07:39] -rw-r--r--. 1 boincer umatlas       620 Jan  9 08:07 runtime_log
[2026-01-09 08:07:39] -rw-------. 1 boincer umatlas   1904640 Jan  9 08:07 result.tar.gz
[2026-01-09 08:07:39] -rw-------. 1 boincer umatlas       656 Jan  9 08:07 vKuLDmDm6x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxokKDmJUmnRm.diag
[2026-01-09 08:07:39] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 08:07 runtime_log.err
[2026-01-09 08:07:39] -rw-r--r--. 1 boincer umatlas     21087 Jan  9 08:07 stderr.txt
[2026-01-09 08:07:39] HITS file was successfully produced:
[2026-01-09 08:07:39] -rw-------. 1 boincer umatlas 222070545 Jan  9 08:06 shared/HITS.pool.root.1
[2026-01-09 08:07:39]  *** Contents of shared directory: ***
[2026-01-09 08:07:39] total 442156
[2026-01-09 08:07:39] -rw-r--r--. 2 boincer umatlas 228168202 Jan  9 05:00 ATLAS.root_0
[2026-01-09 08:07:39] -rw-r--r--. 2 boincer umatlas    592397 Jan  9 05:00 input.tar.gz
[2026-01-09 08:07:39] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 05:00 start_atlas.sh
[2026-01-09 08:07:39] -rw-------. 1 boincer umatlas 222070545 Jan  9 08:06 HITS.pool.root.1
[2026-01-09 08:07:39] -rw-------. 1 boincer umatlas   1904640 Jan  9 08:07 result.tar.gz
08:07:41 (1776860): run_atlas exited; CPU time 44741.493278
08:07:41 (1776860): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN