Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:23:58 (7114): wrapper (7.7.26015): starting
13:23:58 (7114): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 13:23:58] Arguments: --nthreads 8
[2026-01-09 13:23:58] Threads: 8
[2026-01-09 13:23:58] Checking for CVMFS
[2026-01-09 13:23:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 13:23:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 13:23:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 13:23:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 13:23:58] 2.11.2.0 22482 35393 95644 154942 2 57 20610689 25165824 0 130560 0 15599379 99.833 9764510 3880 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 13:23:58] CVMFS is ok
[2026-01-09 13:23:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 13:23:58] Checking for apptainer binary...
[2026-01-09 13:23:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 13:23:58] Running /usr/bin/apptainer --version
[2026-01-09 13:23:58] apptainer version 1.3.2-1.el7
[2026-01-09 13:23:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 13:23:59] cg-vwn445.simple-grid.lan
[2026-01-09 13:23:59] apptainer works
[2026-01-09 13:23:59] Set ATHENA_PROC_NUMBER=8
[2026-01-09 13:23:59] Set ATHENA_CORE_NUMBER=8
[2026-01-09 13:23:59] Starting ATLAS job with PandaID=6963146745
[2026-01-09 13:23:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:09:36]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:09:36] 2026-01-09 15:08:54,188 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 16:09:36] 2026-01-09 15:08:54,189 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 16:09:36] 2026-01-09 15:08:54,191 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6963146745/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:09:36] 2026-01-09 15:08:54,192 | INFO     | extracted standard info from prmon json
[2026-01-09 16:09:36] 2026-01-09 15:08:54,192 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 16:09:36] 2026-01-09 15:08:54,192 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 16:09:36] 2026-01-09 15:08:54,193 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 16:09:36] 2026-01-09 15:08:54,193 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 16:09:36] 2026-01-09 15:08:54,197 | INFO     | fitting pss+swap vs Time
[2026-01-09 16:09:36] 2026-01-09 15:08:54,197 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 16:09:36] 2026-01-09 15:08:54,198 | INFO     | sum of deviations: 5140843594.500002
[2026-01-09 16:09:36] 2026-01-09 15:08:54,198 | INFO     | mean x: 1767966394.5
[2026-01-09 16:09:36] 2026-01-09 15:08:54,198 | INFO     | mean y: 2475809.672839506
[2026-01-09 16:09:36] 2026-01-09 15:08:54,199 | INFO     | intersect: -6892003582.059399
[2026-01-09 16:09:36] 2026-01-09 15:08:54,199 | INFO     | chi2: 2.3133631798454353
[2026-01-09 16:09:36] 2026-01-09 15:08:54,199 | INFO     | sum of square deviations: 1199940638.0
[2026-01-09 16:09:36] 2026-01-09 15:08:54,200 | INFO     | sum of deviations: 15589425045.0
[2026-01-09 16:09:36] 2026-01-09 15:08:54,201 | INFO     | mean x: 1767966242.0
[2026-01-09 16:09:36] 2026-01-09 15:08:54,201 | INFO     | mean y: 2488930.878980892
[2026-01-09 16:09:36] 2026-01-09 15:08:54,201 | INFO     | intersect: -22966628322.860806
[2026-01-09 16:09:36] 2026-01-09 15:08:54,201 | INFO     | chi2: 1.5486139789335311
[2026-01-09 16:09:36] 2026-01-09 15:08:54,201 | INFO     | current chi2=1.5486139789335311 (change=33.05789629464925 %)
[2026-01-09 16:09:36] 2026-01-09 15:08:54,202 | INFO     | sum of square deviations: 1088905998.0
[2026-01-09 16:09:36] 2026-01-09 15:08:54,203 | INFO     | sum of deviations: 15113136801.000002
[2026-01-09 16:09:36] 2026-01-09 15:08:54,203 | INFO     | mean x: 1767966089.5
[2026-01-09 16:09:36] 2026-01-09 15:08:54,203 | INFO     | mean y: 2488275.8947368423
[2026-01-09 16:09:36] 2026-01-09 15:08:54,203 | INFO     | intersect: -24535454778.15988
[2026-01-09 16:09:36] 2026-01-09 15:08:54,203 | INFO     | chi2: 1.5503859426006041
[2026-01-09 16:09:36] 2026-01-09 15:08:54,203 | INFO     | current chi2=1.5503859426006041 (change=-0.114422554050124 %)
[2026-01-09 16:09:36] 2026-01-09 15:08:54,204 | INFO     | right removable region: 151
[2026-01-09 16:09:36] 2026-01-09 15:08:54,204 | INFO     | sum of square deviations: 1199940638.0
[2026-01-09 16:09:36] 2026-01-09 15:08:54,205 | INFO     | sum of deviations: -18625320686.0
[2026-01-09 16:09:36] 2026-01-09 15:08:54,205 | INFO     | mean x: 1767966547.0
[2026-01-09 16:09:36] 2026-01-09 15:08:54,205 | INFO     | mean y: 2505979.617834395
[2026-01-09 16:09:36] 2026-01-09 15:08:54,205 | INFO     | intersect: 27444650080.07882
[2026-01-09 16:09:36] 2026-01-09 15:08:54,206 | INFO     | chi2: 0.8799646640042472
[2026-01-09 16:09:36] 2026-01-09 15:08:54,206 | INFO     | current chi2=0.8799646640042472 (change=61.961672439904525 %)
[2026-01-09 16:09:36] 2026-01-09 15:08:54,206 | INFO     | sum of square deviations: 1088905998.0
[2026-01-09 16:09:36] 2026-01-09 15:08:54,207 | INFO     | sum of deviations: -16579493535.999998
[2026-01-09 16:09:36] 2026-01-09 15:08:54,207 | INFO     | mean x: 1767966699.5
[2026-01-09 16:09:36] 2026-01-09 15:08:54,208 | INFO     | mean y: 2503093.289473684
[2026-01-09 16:09:36] 2026-01-09 15:08:54,208 | INFO     | intersect: 26921256888.438927
[2026-01-09 16:09:36] 2026-01-09 15:08:54,208 | INFO     | chi2: 0.8638186721198704
[2026-01-09 16:09:36] 2026-01-09 15:08:54,208 | INFO     | current chi2=0.8638186721198704 (change=1.8348454824202907 %)
[2026-01-09 16:09:36] 2026-01-09 15:08:54,208 | INFO     | left removable region: 20
[2026-01-09 16:09:36] 2026-01-09 15:08:54,209 | INFO     | sum of square deviations: 697054930.0
[2026-01-09 16:09:36] 2026-01-09 15:08:54,210 | INFO     | sum of deviations: 2046190954.0
[2026-01-09 16:09:36] 2026-01-09 15:08:54,210 | INFO     | mean x: 1767966669.0
[2026-01-09 16:09:36] 2026-01-09 15:08:54,210 | INFO     | mean y: 2504561.5038167937
[2026-01-09 16:09:36] 2026-01-09 15:08:54,210 | INFO     | intersect: -5187326611.602314
[2026-01-09 16:09:36] 2026-01-09 15:08:54,210 | INFO     | chi2: 0.0007532591419979149
[2026-01-09 16:09:36] 2026-01-09 15:08:54,210 | INFO     | current memory leak: 2.94 B/s (using 131 data points, chi2=0.00)
[2026-01-09 16:09:36] 2026-01-09 15:08:54,211 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 16:09:36] 2026-01-09 15:08:54,211 | INFO     | ..............................
[2026-01-09 16:09:36] 2026-01-09 15:08:54,211 | INFO     | . Timing measurements:
[2026-01-09 16:09:36] 2026-01-09 15:08:54,211 | INFO     | . get job = 0 s
[2026-01-09 16:09:36] 2026-01-09 15:08:54,212 | INFO     | . initial setup = 2 s
[2026-01-09 16:09:36] 2026-01-09 15:08:54,212 | INFO     | . payload setup = 6 s
[2026-01-09 16:09:36] 2026-01-09 15:08:54,212 | INFO     | . stage-in = 0 s
[2026-01-09 16:09:36] 2026-01-09 15:08:54,212 | INFO     | . payload execution = 9843 s
[2026-01-09 16:09:36] 2026-01-09 15:08:54,212 | INFO     | . stage-out = 1 s
[2026-01-09 16:09:36] 2026-01-09 15:08:54,212 | INFO     | . log creation = 0 s
[2026-01-09 16:09:36] 2026-01-09 15:08:54,212 | INFO     | ..............................
[2026-01-09 16:09:36] 2026-01-09 15:08:54,326 | INFO     | 
[2026-01-09 16:09:36] 2026-01-09 15:08:54,326 | INFO     | job summary report
[2026-01-09 16:09:36] 2026-01-09 15:08:54,326 | INFO     | --------------------------------------------------
[2026-01-09 16:09:36] 2026-01-09 15:08:54,326 | INFO     | PanDA job id: 6963146745
[2026-01-09 16:09:36] 2026-01-09 15:08:54,326 | INFO     | task id: 47898826
[2026-01-09 16:09:36] 2026-01-09 15:08:54,326 | INFO     | errors: (none)
[2026-01-09 16:09:36] 2026-01-09 15:08:54,327 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 16:09:36] 2026-01-09 15:08:54,327 | INFO     | pilot state: finished 
[2026-01-09 16:09:36] 2026-01-09 15:08:54,327 | INFO     | transexitcode: 0
[2026-01-09 16:09:36] 2026-01-09 15:08:54,327 | INFO     | exeerrorcode: 0
[2026-01-09 16:09:36] 2026-01-09 15:08:54,327 | INFO     | exeerrordiag: 
[2026-01-09 16:09:36] 2026-01-09 15:08:54,327 | INFO     | exitcode: 0
[2026-01-09 16:09:36] 2026-01-09 15:08:54,327 | INFO     | exitmsg: OK
[2026-01-09 16:09:36] 2026-01-09 15:08:54,327 | INFO     | cpuconsumptiontime: 73365 s
[2026-01-09 16:09:36] 2026-01-09 15:08:54,327 | INFO     | nevents: 400
[2026-01-09 16:09:36] 2026-01-09 15:08:54,327 | INFO     | neventsw: 0
[2026-01-09 16:09:36] 2026-01-09 15:08:54,328 | INFO     | pid: 17272
[2026-01-09 16:09:36] 2026-01-09 15:08:54,328 | INFO     | pgrp: 17272
[2026-01-09 16:09:36] 2026-01-09 15:08:54,328 | INFO     | corecount: 8
[2026-01-09 16:09:36] 2026-01-09 15:08:54,328 | INFO     | event service: False
[2026-01-09 16:09:36] 2026-01-09 15:08:54,328 | INFO     | sizes: {0: 2283800, 1: 2283999, 6: 2284261, 12: 2284289, 9853: 2312605, 9855: 2321605, 9856: 2321789, 9863: 2322047}
[2026-01-09 16:09:36] 2026-01-09 15:08:54,328 | INFO     | --------------------------------------------------
[2026-01-09 16:09:36] 2026-01-09 15:08:54,328 | INFO     | 
[2026-01-09 16:09:36] 2026-01-09 15:08:54,328 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-01-09 16:09:36] 2026-01-09 15:08:54,350 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 16:09:36] 2026-01-09 15:08:54,350 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 16:09:36] 2026-01-09 15:08:54,350 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 16:09:36] 2026-01-09 15:08:54,350 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 16:09:36] 2026-01-09 15:08:54,350 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 16:09:36] 2026-01-09 15:08:54,351 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 16:09:36] 2026-01-09 15:08:54,351 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 16:09:36] 2026-01-09 15:08:54,351 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 16:09:36] 2026-01-09 15:08:54,351 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 16:09:36] 2026-01-09 15:08:54,351 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 16:09:36] 2026-01-09 15:08:54,351 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 16:09:36] 2026-01-09 15:08:54,351 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 16:09:36] 2026-01-09 15:08:54,351 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 16:09:36] 2026-01-09 15:08:54,352 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 16:09:36] 2026-01-09 15:08:54,352 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 16:09:36] 2026-01-09 15:08:54,352 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 16:09:36] 2026-01-09 15:08:54,352 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 16:09:36] 2026-01-09 15:08:54,352 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 16:09:36] 2026-01-09 15:08:54,352 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 16:09:36] 2026-01-09 15:08:54,352 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 16:09:36] 2026-01-09 15:08:54,352 | INFO     | job 6963146745 has completed (purged errors)
[2026-01-09 16:09:36] 2026-01-09 15:08:54,353 | INFO     | overall cleanup function is called
[2026-01-09 16:09:36] 2026-01-09 15:08:55,361 | INFO     | --- collectZombieJob: --- 10, [17272]
[2026-01-09 16:09:36] 2026-01-09 15:08:55,361 | INFO     | zombie collector waiting for pid 17272
[2026-01-09 16:09:36] 2026-01-09 15:08:55,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 16:09:36] 2026-01-09 15:08:55,362 | INFO     | collected zombie processes
[2026-01-09 16:09:36] 2026-01-09 15:08:55,362 | INFO     | will attempt to kill all subprocesses of pid=17272
[2026-01-09 16:09:36] 2026-01-09 15:08:55,424 | INFO     | process IDs to be killed: [17272] (in reverse order)
[2026-01-09 16:09:36] 2026-01-09 15:08:55,469 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 16:09:36] 2026-01-09 15:08:55,469 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 16:09:36] 2026-01-09 15:08:55,471 | INFO     | did not find any defunct processes belonging to 17272
[2026-01-09 16:09:36] 2026-01-09 15:08:55,473 | INFO     | did not find any defunct processes belonging to 17272
[2026-01-09 16:09:36] 2026-01-09 15:08:55,473 | INFO     | ready for new job
[2026-01-09 16:09:36] 2026-01-09 15:08:55,473 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 16:09:36] 2026-01-09 15:08:55,475 | INFO     | ***************************************
[2026-01-09 16:09:36] 2026-01-09 15:08:55,475 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 16:09:36] 2026-01-09 15:08:55,475 | INFO     | ***************************************
[2026-01-09 16:09:36] 2026-01-09 15:08:55,476 | INFO     | 
[2026-01-09 16:09:36] 2026-01-09 15:08:55,476 | INFO     | pilot is running in a VM
[2026-01-09 16:09:36] 2026-01-09 15:08:55,476 | INFO     | architecture information:
[2026-01-09 16:09:36] 2026-01-09 15:08:55,477 | INFO     | executing command: cat /etc/os-release
[2026-01-09 16:09:36] 2026-01-09 15:08:55,497 | INFO     | cat /etc/os-release:
[2026-01-09 16:09:36] NAME="CentOS Linux"
[2026-01-09 16:09:36] VERSION="7 (Core)"
[2026-01-09 16:09:36] ID="centos"
[2026-01-09 16:09:36] ID_LIKE="rhel fedora"
[2026-01-09 16:09:36] VERSION_ID="7"
[2026-01-09 16:09:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:09:36] ANSI_COLOR="0;31"
[2026-01-09 16:09:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:09:36] HOME_URL="https://www.centos.org/"
[2026-01-09 16:09:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:09:36] 
[2026-01-09 16:09:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:09:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:09:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:09:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:09:36] 
[2026-01-09 16:09:36] 2026-01-09 15:08:55,498 | INFO     | ***************************************
[2026-01-09 16:09:36] 2026-01-09 15:08:56,001 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-01-09 16:09:36] 2026-01-09 15:08:56,020 | INFO     | sufficient remaining disk space (498123931648 B)
[2026-01-09 16:09:36] 2026-01-09 15:08:56,021 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:09:36] 2026-01-09 15:08:56,021 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:09:36] 2026-01-09 15:08:56,021 | INFO     | update_server=False
[2026-01-09 16:09:36] 2026-01-09 15:08:56,021 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:09:36] 2026-01-09 15:08:56,022 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:09:36] 2026-01-09 15:08:56,141 | INFO     | all payload control threads have been joined
[2026-01-09 16:09:36] 2026-01-09 15:08:56,618 | INFO     | all data control threads have been joined
[2026-01-09 16:09:36] 2026-01-09 15:08:56,888 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:09:36] 2026-01-09 15:08:56,889 | INFO     | aborting loop
[2026-01-09 16:09:36] 2026-01-09 15:08:56,973 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:09:36] 2026-01-09 15:08:57,027 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:09:36] 2026-01-09 15:08:57,028 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:09:36] 2026-01-09 15:08:57,037 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:09:36] 2026-01-09 15:08:57,059 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:09:36] 2026-01-09 15:08:57,146 | INFO     | [payload] control thread has finished
[2026-01-09 16:09:36] 2026-01-09 15:08:57,624 | INFO     | [data] control thread has finished
[2026-01-09 16:09:36] 2026-01-09 15:08:57,660 | INFO     | all job control threads have been joined
[2026-01-09 16:09:36] 2026-01-09 15:08:57,724 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:09:36] 2026-01-09 15:08:57,894 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:09:36] 2026-01-09 15:08:58,027 | INFO     | [job] validate thread has finished
[2026-01-09 16:09:36] 2026-01-09 15:08:58,363 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:09:36] 2026-01-09 15:08:58,376 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:09:36] 2026-01-09 15:08:58,422 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:09:36] 2026-01-09 15:08:58,490 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:09:36] 2026-01-09 15:08:58,666 | INFO     | [job] control thread has finished
[2026-01-09 16:09:36] 2026-01-09 15:08:58,975 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:09:36] 2026-01-09 15:09:02,369 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:09:36] 2026-01-09 15:09:06,427 | INFO     | job.realtimelogging is not enabled
[2026-01-09 16:09:36] 2026-01-09 15:09:07,432 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:09:36] 2026-01-09 15:09:22,243 [wrapper] supervise_pilot (15 min periods counter: 12)
[2026-01-09 16:09:36] 2026-01-09 15:09:27,062 | INFO     | PID=10840 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 16:09:36] 2026-01-09 15:09:27,063 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:09:36] 2026-01-09 15:09:27,063 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:09:36] 2026-01-09 15:09:27,063 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:09:36] 2026-01-09 15:09:30,237 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:09:36] 2026-01-09 15:09:30,676 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139728393525056)>', '<ExcThread(monitor, started 139727919355648)>']
[2026-01-09 16:09:36] 2026-01-09 15:09:31,084 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:09:36] 2026-01-09 15:09:31,085 | INFO     | [monitor] control thread has ended
[2026-01-09 16:09:36] 2026-01-09 15:09:35,701 | INFO     | all workflow threads have been joined
[2026-01-09 16:09:36] 2026-01-09 15:09:35,702 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:09:36] 2026-01-09 15:09:35,702 | INFO     | traces error code: 0
[2026-01-09 16:09:36] 2026-01-09 15:09:35,702 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:09:36] 2026-01-09 15:09:35,827 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:09:36] 2026-01-09 15:09:35,831 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:09:36] 2026-01-09 15:09:35,835 [wrapper] pilotpid: 10840
[2026-01-09 16:09:36] 2026-01-09 15:09:35,839 [wrapper] Pilot exit status: 0
[2026-01-09 16:09:36] 2026-01-09 15:09:35,856 [wrapper] pandaids: 6963146745
[2026-01-09 16:09:36] 2026-01-09 15:09:35,894 [wrapper] cleanup supervisor_pilot  5964 10841
[2026-01-09 16:09:36] 2026-01-09 15:09:35,898 [wrapper] Test setup, not cleaning
[2026-01-09 16:09:36] 2026-01-09 15:09:35,901 [wrapper] apfmon messages muted
[2026-01-09 16:09:36] 2026-01-09 15:09:35,905 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:09:36] 2026-01-09 15:09:35,908 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:09:36]  *** Error codes and diagnostics ***
[2026-01-09 16:09:36]     "exeErrorCode": 0,
[2026-01-09 16:09:36]     "exeErrorDiag": "",
[2026-01-09 16:09:36]     "pilotErrorCode": 0,
[2026-01-09 16:09:36]     "pilotErrorDiag": "",
[2026-01-09 16:09:36]  *** Listing of results directory ***
[2026-01-09 16:09:36] total 439000
[2026-01-09 16:09:36] -rw-r--r--. 1 boinc boinc    579449 Jan  8 16:02 pilot3.tar.gz
[2026-01-09 16:09:36] -rwx------. 1 boinc boinc     36322 Jan  8 16:06 runpilot2-wrapper.sh
[2026-01-09 16:09:36] -rw-r--r--. 1 boinc boinc      5112 Jan  8 16:07 queuedata.json
[2026-01-09 16:09:36] -rw-r--r--. 1 boinc boinc       100 Jan  9 13:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:09:36] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 13:23 run_atlas
[2026-01-09 16:09:36] -rw-r--r--. 1 boinc boinc       105 Jan  9 13:23 job.xml
[2026-01-09 16:09:36] -rw-r--r--. 1 boinc boinc      6391 Jan  9 13:23 init_data.xml
[2026-01-09 16:09:36] -rw-r--r--. 2 boinc boinc 226667000 Jan  9 13:23 EVNT.47898824._001067.pool.root.1
[2026-01-09 16:09:36] -rw-r--r--. 2 boinc boinc     15847 Jan  9 13:23 start_atlas.sh
[2026-01-09 16:09:36] drwxrwx--x. 2 boinc boinc        68 Jan  9 13:23 shared
[2026-01-09 16:09:36] -rw-r--r--. 2 boinc boinc    592401 Jan  9 13:23 input.tar.gz
[2026-01-09 16:09:36] -rw-r--r--. 1 boinc boinc         0 Jan  9 13:23 boinc_lockfile
[2026-01-09 16:09:36] -rw-r--r--. 1 boinc boinc      2519 Jan  9 13:23 pandaJob.out
[2026-01-09 16:09:36] -rw-------. 1 boinc boinc    989377 Jan  9 13:24 agis_schedconf.cvmfs.json
[2026-01-09 16:09:36] -rw-------. 1 boinc boinc   1516240 Jan  9 13:24 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:09:36] drwx------. 5 boinc boinc      4096 Jan  9 13:24 pilot3
[2026-01-09 16:09:36] -rw-------. 1 boinc boinc 215491777 Jan  9 16:08 HITS.47898826._027072.pool.root.1
[2026-01-09 16:09:36] -rw-r--r--. 1 boinc boinc       530 Jan  9 16:08 boinc_task_state.xml
[2026-01-09 16:09:36] -rw-------. 1 boinc boinc      1013 Jan  9 16:08 memory_monitor_summary.json
[2026-01-09 16:09:36] -rw-------. 1 boinc boinc    408455 Jan  9 16:08 log.47898826._027072.job.log.tgz.1
[2026-01-09 16:09:36] -rw-------. 1 boinc boinc      7769 Jan  9 16:08 heartbeat.json
[2026-01-09 16:09:36] -rw-r--r--. 1 boinc boinc      8192 Jan  9 16:09 boinc_mmap_file
[2026-01-09 16:09:36] -rw-r--r--. 1 boinc boinc        28 Jan  9 16:09 wrapper_checkpoint.txt
[2026-01-09 16:09:36] -rw-------. 1 boinc boinc        95 Jan  9 16:09 pilot_heartbeat.json
[2026-01-09 16:09:36] -rw-------. 1 boinc boinc      4882 Jan  9 16:09 pilotlog.txt
[2026-01-09 16:09:36] -rw-------. 1 boinc boinc   1330819 Jan  9 16:09 log.47898826._027072.job.log.1
[2026-01-09 16:09:36] -rw-------. 1 boinc boinc       357 Jan  9 16:09 output.list
[2026-01-09 16:09:36] -rw-r--r--. 1 boinc boinc       620 Jan  9 16:09 runtime_log
[2026-01-09 16:09:36] -rw-------. 1 boinc boinc   1761280 Jan  9 16:09 result.tar.gz
[2026-01-09 16:09:36] -rw-------. 1 boinc boinc       653 Jan  9 16:09 KRbNDmYl6x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmIafKDmDbH9Mm.diag
[2026-01-09 16:09:36] -rw-r--r--. 1 boinc boinc      8832 Jan  9 16:09 runtime_log.err
[2026-01-09 16:09:36] -rw-r--r--. 1 boinc boinc     20697 Jan  9 16:09 stderr.txt
[2026-01-09 16:09:36] HITS file was successfully produced:
[2026-01-09 16:09:36] -rw-------. 1 boinc boinc 215491777 Jan  9 16:08 shared/HITS.pool.root.1
[2026-01-09 16:09:36]  *** Contents of shared directory: ***
[2026-01-09 16:09:36] total 434116
[2026-01-09 16:09:36] -rw-r--r--. 2 boinc boinc 226667000 Jan  9 13:23 ATLAS.root_0
[2026-01-09 16:09:36] -rw-r--r--. 2 boinc boinc     15847 Jan  9 13:23 start_atlas.sh
[2026-01-09 16:09:36] -rw-r--r--. 2 boinc boinc    592401 Jan  9 13:23 input.tar.gz
[2026-01-09 16:09:36] -rw-------. 1 boinc boinc 215491777 Jan  9 16:08 HITS.pool.root.1
[2026-01-09 16:09:36] -rw-------. 1 boinc boinc   1761280 Jan  9 16:09 result.tar.gz
16:09:37 (7114): run_atlas exited; CPU time 73432.702983
16:09:37 (7114): called boinc_finish(0)

</stderr_txt>
]]>

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