Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:56:19 (2632712): wrapper (7.7.26015): starting
09:56:19 (2632712): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 09:56:19] Arguments: --nthreads 12
[2026-01-09 09:56:19] Threads: 12
[2026-01-09 09:56:19] Checking for CVMFS
[2026-01-09 09:56:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:56:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:56:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:56:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:56:20] 2.13.3.0 2571963 191 52428 154937 1 57 3891824 4097024 0 130560 0 110360 99.982 8237 19335 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-01-09 09:56:20] CVMFS is ok
[2026-01-09 09:56:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 09:56:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 09:56:20] Further information can be found at the LHC@home message board.
[2026-01-09 09:56:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:56:20] Checking for apptainer binary...
[2026-01-09 09:56:20] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2026-01-09 09:56:20] apptainer is not installed, using version from CVMFS
[2026-01-09 09:56:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:56:22] pckelar5.cern.ch
[2026-01-09 09:56:22] apptainer works
[2026-01-09 09:56:22] Set ATHENA_PROC_NUMBER=12
[2026-01-09 09:56:22] Set ATHENA_CORE_NUMBER=12
[2026-01-09 09:56:22] Starting ATLAS job with PandaID=6963145579
[2026-01-09 09:56:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:55:10]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:55:10] 2026-01-09 11:54:27,757 | INFO     | monitor loop #783: job 0:6963145579 is in state 'finished'
[2026-01-09 12:55:10] 2026-01-09 11:54:27,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:55:10] 2026-01-09 11:54:28,509 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 12:55:10] 2026-01-09 11:54:28,515 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2824.795833333333
[2026-01-09 12:55:10] 2026-01-09 11:54:28,520 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6963145579/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:55:10] 2026-01-09 11:54:28,521 | INFO     | extracted standard info from prmon json
[2026-01-09 12:55:10] 2026-01-09 11:54:28,521 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:55:10] 2026-01-09 11:54:28,521 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:55:10] 2026-01-09 11:54:28,522 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 12:55:10] 2026-01-09 11:54:28,522 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 12:55:10] 2026-01-09 11:54:28,527 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:55:10] 2026-01-09 11:54:28,528 | INFO     | sum of square deviations: 1633472487.5
[2026-01-09 12:55:10] 2026-01-09 11:54:28,529 | INFO     | sum of deviations: 8845307805.999998
[2026-01-09 12:55:10] 2026-01-09 11:54:28,530 | INFO     | mean x: 1767954347.5
[2026-01-09 12:55:10] 2026-01-09 11:54:28,530 | INFO     | mean y: 2671712.4942528736
[2026-01-09 12:55:10] 2026-01-09 11:54:28,530 | INFO     | intersect: -9570859834.723425
[2026-01-09 12:55:10] 2026-01-09 11:54:28,530 | INFO     | chi2: 2.5874727962238913
[2026-01-09 12:55:10] 2026-01-09 11:54:28,531 | INFO     | sum of square deviations: 1496660620.0
[2026-01-09 12:55:10] 2026-01-09 11:54:28,532 | INFO     | sum of deviations: 21191766976.00001
[2026-01-09 12:55:10] 2026-01-09 11:54:28,532 | INFO     | mean x: 1767954195.0
[2026-01-09 12:55:10] 2026-01-09 11:54:28,533 | INFO     | mean y: 2685146.8698224854
[2026-01-09 12:55:10] 2026-01-09 11:54:28,533 | INFO     | intersect: -25030427119.2107
[2026-01-09 12:55:10] 2026-01-09 11:54:28,533 | INFO     | chi2: 1.79317235121505
[2026-01-09 12:55:10] 2026-01-09 11:54:28,533 | INFO     | current chi2=1.79317235121505 (change=30.69792448322658 %)
[2026-01-09 12:55:10] 2026-01-09 11:54:28,534 | INFO     | sum of square deviations: 1367709365.0
[2026-01-09 12:55:10] 2026-01-09 11:54:28,535 | INFO     | sum of deviations: 20676100334.499996
[2026-01-09 12:55:10] 2026-01-09 11:54:28,535 | INFO     | mean x: 1767954042.5
[2026-01-09 12:55:10] 2026-01-09 11:54:28,535 | INFO     | mean y: 2684536.8597560977
[2026-01-09 12:55:10] 2026-01-09 11:54:28,536 | INFO     | intersect: -26724042723.295307
[2026-01-09 12:55:10] 2026-01-09 11:54:28,536 | INFO     | chi2: 1.7951796006868408
[2026-01-09 12:55:10] 2026-01-09 11:54:28,536 | INFO     | current chi2=1.7951796006868408 (change=-0.11193845758500373 %)
[2026-01-09 12:55:10] 2026-01-09 11:54:28,536 | INFO     | right removable region: 163
[2026-01-09 12:55:10] 2026-01-09 11:54:28,537 | INFO     | sum of square deviations: 1496660620.0
[2026-01-09 12:55:10] 2026-01-09 11:54:28,538 | INFO     | sum of deviations: -23279057778.0
[2026-01-09 12:55:10] 2026-01-09 11:54:28,538 | INFO     | mean x: 1767954500.0
[2026-01-09 12:55:10] 2026-01-09 11:54:28,539 | INFO     | mean y: 2707117.75739645
[2026-01-09 12:55:10] 2026-01-09 11:54:28,539 | INFO     | intersect: 27501469632.38486
[2026-01-09 12:55:10] 2026-01-09 11:54:28,539 | INFO     | chi2: 0.9504520931241246
[2026-01-09 12:55:10] 2026-01-09 11:54:28,539 | INFO     | current chi2=0.9504520931241246 (change=63.26716576455619 %)
[2026-01-09 12:55:10] 2026-01-09 11:54:28,540 | INFO     | sum of square deviations: 1367709365.0
[2026-01-09 12:55:10] 2026-01-09 11:54:28,541 | INFO     | sum of deviations: -21849781540.0
[2026-01-09 12:55:10] 2026-01-09 11:54:28,541 | INFO     | mean x: 1767954652.5
[2026-01-09 12:55:10] 2026-01-09 11:54:28,541 | INFO     | mean y: 2705332.926829268
[2026-01-09 12:55:10] 2026-01-09 11:54:28,542 | INFO     | intersect: 28246588074.602444
[2026-01-09 12:55:10] 2026-01-09 11:54:28,542 | INFO     | chi2: 0.921875602503697
[2026-01-09 12:55:10] 2026-01-09 11:54:28,542 | INFO     | current chi2=0.921875602503697 (change=3.006620830987596 %)
[2026-01-09 12:55:10] 2026-01-09 11:54:28,542 | INFO     | left removable region: 20
[2026-01-09 12:55:10] 2026-01-09 11:54:28,543 | INFO     | sum of square deviations: 906703512.0
[2026-01-09 12:55:10] 2026-01-09 11:54:28,544 | INFO     | sum of deviations: 72697603.99999988
[2026-01-09 12:55:10] 2026-01-09 11:54:28,544 | INFO     | mean x: 1767954622.0
[2026-01-09 12:55:10] 2026-01-09 11:54:28,544 | INFO     | mean y: 2708262.3776223776
[2026-01-09 12:55:10] 2026-01-09 11:54:28,544 | INFO     | intersect: -139042666.45315233
[2026-01-09 12:55:10] 2026-01-09 11:54:28,545 | INFO     | chi2: 0.002278619827320899
[2026-01-09 12:55:10] 2026-01-09 11:54:28,545 | INFO     | current memory leak: 0.08 B/s (using 143 data points, chi2=0.00)
[2026-01-09 12:55:10] 2026-01-09 11:54:28,545 | INFO     | could have reported an average CPU frequency of 2812 MHz (9 samples)
[2026-01-09 12:55:10] 2026-01-09 11:54:28,546 | INFO     | ..............................
[2026-01-09 12:55:10] 2026-01-09 11:54:28,546 | INFO     | . Timing measurements:
[2026-01-09 12:55:10] 2026-01-09 11:54:28,546 | INFO     | . get job = 0 s
[2026-01-09 12:55:10] 2026-01-09 11:54:28,546 | INFO     | . initial setup = 3 s
[2026-01-09 12:55:10] 2026-01-09 11:54:28,546 | INFO     | . payload setup = 22 s
[2026-01-09 12:55:10] 2026-01-09 11:54:28,546 | INFO     | . stage-in = 0 s
[2026-01-09 12:55:10] 2026-01-09 11:54:28,547 | INFO     | . payload execution = 10591 s
[2026-01-09 12:55:10] 2026-01-09 11:54:28,547 | INFO     | . stage-out = 1 s
[2026-01-09 12:55:10] 2026-01-09 11:54:28,547 | INFO     | . log creation = 0 s
[2026-01-09 12:55:10] 2026-01-09 11:54:28,547 | INFO     | ..............................
[2026-01-09 12:55:10] 2026-01-09 11:54:28,879 | INFO     | time since job start (10662s) is within the limit (349056.0s)
[2026-01-09 12:55:10] 2026-01-09 11:54:29,001 | INFO     | 
[2026-01-09 12:55:10] 2026-01-09 11:54:29,001 | INFO     | job summary report
[2026-01-09 12:55:10] 2026-01-09 11:54:29,001 | INFO     | --------------------------------------------------
[2026-01-09 12:55:10] 2026-01-09 11:54:29,001 | INFO     | PanDA job id: 6963145579
[2026-01-09 12:55:10] 2026-01-09 11:54:29,001 | INFO     | task id: 47898826
[2026-01-09 12:55:10] 2026-01-09 11:54:29,002 | INFO     | errors: (none)
[2026-01-09 12:55:10] 2026-01-09 11:54:29,002 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:55:10] 2026-01-09 11:54:29,002 | INFO     | pilot state: finished 
[2026-01-09 12:55:10] 2026-01-09 11:54:29,002 | INFO     | transexitcode: 0
[2026-01-09 12:55:10] 2026-01-09 11:54:29,002 | INFO     | exeerrorcode: 0
[2026-01-09 12:55:10] 2026-01-09 11:54:29,002 | INFO     | exeerrordiag: 
[2026-01-09 12:55:10] 2026-01-09 11:54:29,003 | INFO     | exitcode: 0
[2026-01-09 12:55:10] 2026-01-09 11:54:29,003 | INFO     | exitmsg: OK
[2026-01-09 12:55:10] 2026-01-09 11:54:29,003 | INFO     | cpuconsumptiontime: 118707 s
[2026-01-09 12:55:10] 2026-01-09 11:54:29,003 | INFO     | nevents: 400
[2026-01-09 12:55:10] 2026-01-09 11:54:29,003 | INFO     | neventsw: 0
[2026-01-09 12:55:10] 2026-01-09 11:54:29,003 | INFO     | pid: 2644414
[2026-01-09 12:55:10] 2026-01-09 11:54:29,004 | INFO     | pgrp: 2644414
[2026-01-09 12:55:10] 2026-01-09 11:54:29,004 | INFO     | corecount: 12
[2026-01-09 12:55:10] 2026-01-09 11:54:29,004 | INFO     | event service: False
[2026-01-09 12:55:10] 2026-01-09 11:54:29,004 | INFO     | sizes: {0: 2283141, 1: 2283998, 2: 2283998, 12: 2284026, 13: 2284316, 23: 2284372, 10618: 2313186, 10619: 2322186, 10620: 2322242, 10629: 2322500}
[2026-01-09 12:55:10] 2026-01-09 11:54:29,004 | INFO     | --------------------------------------------------
[2026-01-09 12:55:10] 2026-01-09 11:54:29,004 | INFO     | 
[2026-01-09 12:55:10] 2026-01-09 11:54:29,005 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-01-09 12:55:10] 2026-01-09 11:54:29,025 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:55:10] 2026-01-09 11:54:29,025 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:55:10] 2026-01-09 11:54:29,026 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:55:10] 2026-01-09 11:54:29,026 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:55:10] 2026-01-09 11:54:29,026 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:55:10] 2026-01-09 11:54:29,026 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:55:10] 2026-01-09 11:54:29,026 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:55:10] 2026-01-09 11:54:29,026 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:55:10] 2026-01-09 11:54:29,027 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:55:10] 2026-01-09 11:54:29,027 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:55:10] 2026-01-09 11:54:29,027 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:55:10] 2026-01-09 11:54:29,027 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:55:10] 2026-01-09 11:54:29,027 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:55:10] 2026-01-09 11:54:29,028 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:55:10] 2026-01-09 11:54:29,028 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:55:10] 2026-01-09 11:54:29,028 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:55:10] 2026-01-09 11:54:29,028 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:55:10] 2026-01-09 11:54:29,028 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:55:10] 2026-01-09 11:54:29,028 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:55:10] 2026-01-09 11:54:29,029 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:55:10] 2026-01-09 11:54:29,029 | INFO     | job 6963145579 has completed (purged errors)
[2026-01-09 12:55:10] 2026-01-09 11:54:29,029 | INFO     | overall cleanup function is called
[2026-01-09 12:55:10] 2026-01-09 11:54:30,037 | INFO     | --- collectZombieJob: --- 10, [2644414]
[2026-01-09 12:55:10] 2026-01-09 11:54:30,038 | INFO     | zombie collector waiting for pid 2644414
[2026-01-09 12:55:10] 2026-01-09 11:54:30,038 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:55:10] 2026-01-09 11:54:30,038 | INFO     | collected zombie processes
[2026-01-09 12:55:10] 2026-01-09 11:54:30,038 | INFO     | will attempt to kill all subprocesses of pid=2644414
[2026-01-09 12:55:10] 2026-01-09 11:54:30,231 | INFO     | process IDs to be killed: [2644414] (in reverse order)
[2026-01-09 12:55:10] 2026-01-09 11:54:30,292 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:55:10] 2026-01-09 11:54:30,292 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:55:10] 2026-01-09 11:54:30,298 | INFO     | did not find any defunct processes belonging to 2644414
[2026-01-09 12:55:10] 2026-01-09 11:54:30,304 | INFO     | did not find any defunct processes belonging to 2644414
[2026-01-09 12:55:10] 2026-01-09 11:54:30,305 | INFO     | ready for new job
[2026-01-09 12:55:10] 2026-01-09 11:54:30,305 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:55:10] 2026-01-09 11:54:30,307 | INFO     | ***************************************
[2026-01-09 12:55:10] 2026-01-09 11:54:30,307 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:55:10] 2026-01-09 11:54:30,307 | INFO     | ***************************************
[2026-01-09 12:55:10] 2026-01-09 11:54:30,307 | INFO     | 
[2026-01-09 12:55:10] 2026-01-09 11:54:30,309 | INFO     | architecture information:
[2026-01-09 12:55:10] 2026-01-09 11:54:30,309 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:55:10] 2026-01-09 11:54:30,323 | INFO     | cat /etc/os-release:
[2026-01-09 12:55:10] NAME="CentOS Linux"
[2026-01-09 12:55:10] VERSION="7 (Core)"
[2026-01-09 12:55:10] ID="centos"
[2026-01-09 12:55:10] ID_LIKE="rhel fedora"
[2026-01-09 12:55:10] VERSION_ID="7"
[2026-01-09 12:55:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:55:10] ANSI_COLOR="0;31"
[2026-01-09 12:55:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:55:10] HOME_URL="https://www.centos.org/"
[2026-01-09 12:55:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:55:10] 
[2026-01-09 12:55:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:55:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:55:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:55:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:55:10] 
[2026-01-09 12:55:10] 2026-01-09 11:54:30,324 | INFO     | ***************************************
[2026-01-09 12:55:10] 2026-01-09 11:54:30,827 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-01-09 12:55:10] 2026-01-09 11:54:30,844 | INFO     | sufficient remaining disk space (1811290259456 B)
[2026-01-09 12:55:10] 2026-01-09 11:54:30,845 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:55:10] 2026-01-09 11:54:30,845 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:55:10] 2026-01-09 11:54:30,845 | INFO     | update_server=False
[2026-01-09 12:55:10] 2026-01-09 11:54:30,845 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:55:10] 2026-01-09 11:54:30,846 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 12:55:10] 2026-01-09 11:54:30,846 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:55:10] 2026-01-09 11:54:30,846 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:55:10] 2026-01-09 11:54:30,847 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:55:10] 2026-01-09 11:54:31,265 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:55:10] 2026-01-09 11:54:31,265 | INFO     | aborting loop
[2026-01-09 12:55:10] 2026-01-09 11:54:31,459 | INFO     | all data control threads have been joined
[2026-01-09 12:55:10] 2026-01-09 11:54:31,609 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:55:10] 2026-01-09 11:54:31,851 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:55:10] 2026-01-09 11:54:31,872 | INFO     | [job] validate thread has finished
[2026-01-09 12:55:10] 2026-01-09 11:54:31,937 | INFO     | all payload control threads have been joined
[2026-01-09 12:55:10] 2026-01-09 11:54:32,053 | INFO     | all job control threads have been joined
[2026-01-09 12:55:10] 2026-01-09 11:54:32,081 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:55:10] 2026-01-09 11:54:32,251 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:55:10] 2026-01-09 11:54:32,268 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:55:10] 2026-01-09 11:54:32,464 | INFO     | [data] control thread has finished
[2026-01-09 12:55:10] 2026-01-09 11:54:32,531 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:55:10] 2026-01-09 11:54:32,750 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:55:10] 2026-01-09 11:54:32,784 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:55:10] 2026-01-09 11:54:32,943 | INFO     | [payload] control thread has finished
[2026-01-09 12:55:10] 2026-01-09 11:54:33,059 | INFO     | [job] control thread has finished
[2026-01-09 12:55:10] 2026-01-09 11:54:33,146 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:55:10] 2026-01-09 11:54:33,165 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:55:10] 2026-01-09 11:54:33,614 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:55:10] 2026-01-09 11:54:33,711 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:55:10] 2026-01-09 11:54:34,291 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:55:10] 2026-01-09 11:54:34,716 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:55:10] 2026-01-09 11:54:38,297 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:55:10] 2026-01-09 11:55:03,562 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:55:10] 2026-01-09 11:55:04,371 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140173158688576)>', '<ExcThread(monitor, started 140172473648896)>']
[2026-01-09 12:55:10] 2026-01-09 11:55:05,013 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:55:10] 2026-01-09 11:55:05,013 | INFO     | [monitor] control thread has ended
[2026-01-09 12:55:10] 2026-01-09 11:55:09,397 | INFO     | all workflow threads have been joined
[2026-01-09 12:55:10] 2026-01-09 11:55:09,397 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:55:10] 2026-01-09 11:55:09,398 | INFO     | traces error code: 0
[2026-01-09 12:55:10] 2026-01-09 11:55:09,398 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:55:10] 2026-01-09 11:55:09,720 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:55:10] 2026-01-09 11:55:09,723 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:55:10] 2026-01-09 11:55:09,725 [wrapper] pilotpid: 2636624
[2026-01-09 12:55:10] 2026-01-09 11:55:09,728 [wrapper] Pilot exit status: 0
[2026-01-09 12:55:10] 2026-01-09 11:55:09,782 [wrapper] pandaids: 6963145579
[2026-01-09 12:55:10] 2026-01-09 11:55:09,822 [wrapper] cleanup supervisor_pilot 2709491 2636625
[2026-01-09 12:55:10] 2026-01-09 11:55:09,824 [wrapper] Test setup, not cleaning
[2026-01-09 12:55:10] 2026-01-09 11:55:09,827 [wrapper] apfmon messages muted
[2026-01-09 12:55:10] 2026-01-09 11:55:09,830 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:55:10] 2026-01-09 11:55:09,832 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:55:10]  *** Error codes and diagnostics ***
[2026-01-09 12:55:10]     "exeErrorCode": 0,
[2026-01-09 12:55:10]     "exeErrorDiag": "",
[2026-01-09 12:55:10]     "pilotErrorCode": 0,
[2026-01-09 12:55:10]     "pilotErrorDiag": "",
[2026-01-09 12:55:10]  *** Listing of results directory ***
[2026-01-09 12:55:10] total 439868
[2026-01-09 12:55:10] -rw-r--r-- 1 boinc boinc    579449 Jan  8 16:02 pilot3.tar.gz
[2026-01-09 12:55:10] -rwx------ 1 boinc boinc     36322 Jan  8 16:05 runpilot2-wrapper.sh
[2026-01-09 12:55:10] -rw-r--r-- 1 boinc boinc      5112 Jan  8 16:07 queuedata.json
[2026-01-09 12:55:10] -rw-r--r-- 1 boinc boinc       100 Jan  9 09:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:55:10] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 09:56 run_atlas
[2026-01-09 12:55:10] -rw-r--r-- 1 boinc boinc       105 Jan  9 09:56 job.xml
[2026-01-09 12:55:10] -rw-r--r-- 2 boinc boinc 223016391 Jan  9 09:56 EVNT.47898824._000353.pool.root.1
[2026-01-09 12:55:10] -rw-r--r-- 1 boinc boinc      6295 Jan  9 09:56 init_data.xml
[2026-01-09 12:55:10] -rw-r--r-- 2 boinc boinc    592399 Jan  9 09:56 input.tar.gz
[2026-01-09 12:55:10] -rw-r--r-- 2 boinc boinc     15847 Jan  9 09:56 start_atlas.sh
[2026-01-09 12:55:10] drwxrwx--x 2 boinc boinc        68 Jan  9 09:56 shared
[2026-01-09 12:55:10] -rw-r--r-- 1 boinc boinc         0 Jan  9 09:56 boinc_lockfile
[2026-01-09 12:55:10] -rw-r--r-- 1 boinc boinc      2519 Jan  9 09:56 pandaJob.out
[2026-01-09 12:55:10] -rw------- 1 boinc boinc    989759 Jan  9 09:56 agis_schedconf.cvmfs.json
[2026-01-09 12:55:10] -rw------- 1 boinc boinc   1516240 Jan  9 09:56 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:55:10] drwx------ 5 boinc boinc      4096 Jan  9 09:56 pilot3
[2026-01-09 12:55:10] -rw------- 1 boinc boinc 219574189 Jan  9 12:53 HITS.47898826._026262.pool.root.1
[2026-01-09 12:55:10] -rw-r--r-- 1 boinc boinc       532 Jan  9 12:53 boinc_task_state.xml
[2026-01-09 12:55:10] -rw------- 1 boinc boinc      1034 Jan  9 12:54 memory_monitor_summary.json
[2026-01-09 12:55:10] -rw------- 1 boinc boinc    480688 Jan  9 12:54 log.47898826._026262.job.log.tgz.1
[2026-01-09 12:55:10] -rw------- 1 boinc boinc        95 Jan  9 12:54 pilot_heartbeat.json
[2026-01-09 12:55:10] -rw------- 1 boinc boinc      7826 Jan  9 12:54 heartbeat.json
[2026-01-09 12:55:10] -rw-r--r-- 1 boinc boinc      8192 Jan  9 12:54 boinc_mmap_file
[2026-01-09 12:55:10] -rw-r--r-- 1 boinc boinc        29 Jan  9 12:54 wrapper_checkpoint.txt
[2026-01-09 12:55:10] -rw------- 1 boinc boinc      4555 Jan  9 12:55 pilotlog.txt
[2026-01-09 12:55:10] -rw------- 1 boinc boinc   1488428 Jan  9 12:55 log.47898826._026262.job.log.1
[2026-01-09 12:55:10] -rw------- 1 boinc boinc       357 Jan  9 12:55 output.list
[2026-01-09 12:55:10] -rw-r--r-- 1 boinc boinc       620 Jan  9 12:55 runtime_log
[2026-01-09 12:55:10] -rw------- 1 boinc boinc   1986560 Jan  9 12:55 result.tar.gz
[2026-01-09 12:55:10] -rw-r--r-- 1 boinc boinc      8858 Jan  9 12:55 runtime_log.err
[2026-01-09 12:55:10] -rw------- 1 boinc boinc       667 Jan  9 12:55 HsCLDmCl6x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGkkKDmGLM76n.diag
[2026-01-09 12:55:10] -rw-r--r-- 1 boinc boinc     21187 Jan  9 12:55 stderr.txt
[2026-01-09 12:55:10] HITS file was successfully produced:
[2026-01-09 12:55:10] -rw------- 1 boinc boinc 219574189 Jan  9 12:53 shared/HITS.pool.root.1
[2026-01-09 12:55:10]  *** Contents of shared directory: ***
[2026-01-09 12:55:10] total 434756
[2026-01-09 12:55:10] -rw-r--r-- 2 boinc boinc 223016391 Jan  9 09:56 ATLAS.root_0
[2026-01-09 12:55:10] -rw-r--r-- 2 boinc boinc    592399 Jan  9 09:56 input.tar.gz
[2026-01-09 12:55:10] -rw-r--r-- 2 boinc boinc     15847 Jan  9 09:56 start_atlas.sh
[2026-01-09 12:55:10] -rw------- 1 boinc boinc 219574189 Jan  9 12:53 HITS.pool.root.1
[2026-01-09 12:55:10] -rw------- 1 boinc boinc   1986560 Jan  9 12:55 result.tar.gz
12:55:11 (2632712): run_atlas exited; CPU time 118816.419713
12:55:11 (2632712): called boinc_finish(0)

</stderr_txt>
]]>

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