Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
08:22:55 (1639374): wrapper (7.7.26015): starting
08:22:55 (1639374): wrapper: running run_atlas (--nthreads 5)
[2026-01-09 08:22:55] Arguments: --nthreads 5
[2026-01-09 08:22:55] Threads: 5
[2026-01-09 08:22:55] Checking for CVMFS
[2026-01-09 08:22:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 08:22:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 08:22:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 08:22:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 08:22:55] 2.11.0.0 2613451 2187 115036 154945 2 188 3434342 4096001 5334 130560 0 8939424 99.998 82510 4016 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-09 08:22:55] CVMFS is ok
[2026-01-09 08:22:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 08:22:55] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-09 08:22:55] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-09 08:22:55] Further information can be found at the LHC@home message board.
[2026-01-09 08:22:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 08:22:55] Checking for apptainer binary...
[2026-01-09 08:22:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 08:22:55] Running /usr/bin/apptainer --version
[2026-01-09 08:22:55] apptainer version 1.4.5
[2026-01-09 08:22:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 08:22:55] x32-linux4
[2026-01-09 08:22:55] apptainer works
[2026-01-09 08:22:55] Set ATHENA_PROC_NUMBER=5
[2026-01-09 08:22:55] Set ATHENA_CORE_NUMBER=5
[2026-01-09 08:22:55] Starting ATLAS job with PandaID=6963146894
[2026-01-09 08:22:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 11:13:26]  *** The last 200 lines of the pilot log: ***
[2026-01-09 11:13:26] 2026-01-09 16:12:20,566 | INFO     | time since job start (10157s) is within the limit (349056.0s)
[2026-01-09 11:13:26] 2026-01-09 16:12:21,781 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 11:13:26] 2026-01-09 16:12:21,783 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3981.92359375
[2026-01-09 11:13:26] 2026-01-09 16:12:21,786 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6963146894/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 11:13:26] 2026-01-09 16:12:21,786 | INFO     | extracted standard info from prmon json
[2026-01-09 11:13:26] 2026-01-09 16:12:21,786 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 11:13:26] 2026-01-09 16:12:21,786 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 11:13:26] 2026-01-09 16:12:21,786 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 11:13:26] 2026-01-09 16:12:21,786 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 11:13:26] 2026-01-09 16:12:21,788 | INFO     | fitting pss+swap vs Time
[2026-01-09 11:13:26] 2026-01-09 16:12:21,788 | INFO     | sum of square deviations: 1444149868.0
[2026-01-09 11:13:26] 2026-01-09 16:12:21,788 | INFO     | sum of deviations: -900788464.0
[2026-01-09 11:13:26] 2026-01-09 16:12:21,788 | INFO     | mean x: 1767970067.0
[2026-01-09 11:13:26] 2026-01-09 16:12:21,788 | INFO     | mean y: 2347887.0898203594
[2026-01-09 11:13:26] 2026-01-09 16:12:21,788 | INFO     | intersect: 1105119196.5914094
[2026-01-09 11:13:26] 2026-01-09 16:12:21,788 | INFO     | chi2: 1.9007100774218473
[2026-01-09 11:13:26] 2026-01-09 16:12:21,788 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 11:13:26] 2026-01-09 16:12:21,789 | INFO     | sum of deviations: 9688470119.0
[2026-01-09 11:13:26] 2026-01-09 16:12:21,789 | INFO     | mean x: 1767969914.5
[2026-01-09 11:13:26] 2026-01-09 16:12:21,789 | INFO     | mean y: 2360405.2716049384
[2026-01-09 11:13:26] 2026-01-09 16:12:21,789 | INFO     | intersect: -12991049982.912247
[2026-01-09 11:13:26] 2026-01-09 16:12:21,789 | INFO     | chi2: 1.0961588512653822
[2026-01-09 11:13:26] 2026-01-09 16:12:21,789 | INFO     | current chi2=1.0961588512653822 (change=42.32898197960685 %)
[2026-01-09 11:13:26] 2026-01-09 16:12:21,789 | INFO     | sum of square deviations: 1199940638.0
[2026-01-09 11:13:26] 2026-01-09 16:12:21,789 | INFO     | sum of deviations: 9500679544.999989
[2026-01-09 11:13:26] 2026-01-09 16:12:21,789 | INFO     | mean x: 1767969762.0
[2026-01-09 11:13:26] 2026-01-09 16:12:21,789 | INFO     | mean y: 2360162.974522293
[2026-01-09 11:13:26] 2026-01-09 16:12:21,789 | INFO     | intersect: -13995760762.414038
[2026-01-09 11:13:26] 2026-01-09 16:12:21,789 | INFO     | chi2: 1.0970074440015392
[2026-01-09 11:13:26] 2026-01-09 16:12:21,790 | INFO     | current chi2=1.0970074440015392 (change=-0.07741512420188082 %)
[2026-01-09 11:13:26] 2026-01-09 16:12:21,790 | INFO     | right removable region: 156
[2026-01-09 11:13:26] 2026-01-09 16:12:21,790 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 11:13:26] 2026-01-09 16:12:21,790 | INFO     | sum of deviations: -17112076911.0
[2026-01-09 11:13:26] 2026-01-09 16:12:21,790 | INFO     | mean x: 1767970219.5
[2026-01-09 11:13:26] 2026-01-09 16:12:21,790 | INFO     | mean y: 2367161.3209876544
[2026-01-09 11:13:26] 2026-01-09 16:12:21,790 | INFO     | intersect: 22951736207.76098
[2026-01-09 11:13:26] 2026-01-09 16:12:21,790 | INFO     | chi2: 0.8313768004234674
[2026-01-09 11:13:26] 2026-01-09 16:12:21,790 | INFO     | current chi2=0.8313768004234674 (change=56.259673145356295 %)
[2026-01-09 11:13:26] 2026-01-09 16:12:21,790 | INFO     | sum of square deviations: 1199940638.0
[2026-01-09 11:13:26] 2026-01-09 16:12:21,791 | INFO     | sum of deviations: -16822522599.0
[2026-01-09 11:13:26] 2026-01-09 16:12:21,791 | INFO     | mean x: 1767970372.0
[2026-01-09 11:13:26] 2026-01-09 16:12:21,791 | INFO     | mean y: 2366781.4840764333
[2026-01-09 11:13:26] 2026-01-09 16:12:21,791 | INFO     | intersect: 24788360851.07774
[2026-01-09 11:13:26] 2026-01-09 16:12:21,791 | INFO     | chi2: 0.8310436853998887
[2026-01-09 11:13:26] 2026-01-09 16:12:21,791 | INFO     | current chi2=0.8310436853998887 (change=0.04006787577053089 %)
[2026-01-09 11:13:26] 2026-01-09 16:12:21,791 | INFO     | left removable region: 20
[2026-01-09 11:13:26] 2026-01-09 16:12:21,791 | INFO     | sum of square deviations: 779958810.0
[2026-01-09 11:13:26] 2026-01-09 16:12:21,791 | INFO     | sum of deviations: -5018936802.5
[2026-01-09 11:13:26] 2026-01-09 16:12:21,791 | INFO     | mean x: 1767970341.5
[2026-01-09 11:13:26] 2026-01-09 16:12:21,791 | INFO     | mean y: 2379554.786764706
[2026-01-09 11:13:26] 2026-01-09 16:12:21,791 | INFO     | intersect: 11379046243.996727
[2026-01-09 11:13:26] 2026-01-09 16:12:21,791 | INFO     | chi2: 0.005139201698991771
[2026-01-09 11:13:26] 2026-01-09 16:12:21,791 | INFO     | current memory leak: -6.43 B/s (using 136 data points, chi2=0.01)
[2026-01-09 11:13:26] 2026-01-09 16:12:21,792 | INFO     | could have reported an average CPU frequency of 3875 MHz (9 samples)
[2026-01-09 11:13:26] 2026-01-09 16:12:21,792 | INFO     | ..............................
[2026-01-09 11:13:26] 2026-01-09 16:12:21,792 | INFO     | . Timing measurements:
[2026-01-09 11:13:26] 2026-01-09 16:12:21,792 | INFO     | . get job = 0 s
[2026-01-09 11:13:26] 2026-01-09 16:12:21,792 | INFO     | . initial setup = 2 s
[2026-01-09 11:13:26] 2026-01-09 16:12:21,792 | INFO     | . payload setup = 3 s
[2026-01-09 11:13:26] 2026-01-09 16:12:21,792 | INFO     | . stage-in = 0 s
[2026-01-09 11:13:26] 2026-01-09 16:12:21,792 | INFO     | . payload execution = 10134 s
[2026-01-09 11:13:26] 2026-01-09 16:12:21,792 | INFO     | . stage-out = 0 s
[2026-01-09 11:13:26] 2026-01-09 16:12:21,792 | INFO     | . log creation = 0 s
[2026-01-09 11:13:26] 2026-01-09 16:12:21,792 | INFO     | ..............................
[2026-01-09 11:13:26] 2026-01-09 16:12:21,849 | INFO     | 
[2026-01-09 11:13:26] 2026-01-09 16:12:21,849 | INFO     | job summary report
[2026-01-09 11:13:26] 2026-01-09 16:12:21,849 | INFO     | --------------------------------------------------
[2026-01-09 11:13:26] 2026-01-09 16:12:21,849 | INFO     | PanDA job id: 6963146894
[2026-01-09 11:13:26] 2026-01-09 16:12:21,849 | INFO     | task id: 47898826
[2026-01-09 11:13:26] 2026-01-09 16:12:21,849 | INFO     | errors: (none)
[2026-01-09 11:13:26] 2026-01-09 16:12:21,849 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 11:13:26] 2026-01-09 16:12:21,849 | INFO     | pilot state: finished 
[2026-01-09 11:13:26] 2026-01-09 16:12:21,849 | INFO     | transexitcode: 0
[2026-01-09 11:13:26] 2026-01-09 16:12:21,849 | INFO     | exeerrorcode: 0
[2026-01-09 11:13:26] 2026-01-09 16:12:21,849 | INFO     | exeerrordiag: 
[2026-01-09 11:13:26] 2026-01-09 16:12:21,849 | INFO     | exitcode: 0
[2026-01-09 11:13:26] 2026-01-09 16:12:21,850 | INFO     | exitmsg: OK
[2026-01-09 11:13:26] 2026-01-09 16:12:21,850 | INFO     | cpuconsumptiontime: 40244 s
[2026-01-09 11:13:26] 2026-01-09 16:12:21,850 | INFO     | nevents: 400
[2026-01-09 11:13:26] 2026-01-09 16:12:21,850 | INFO     | neventsw: 0
[2026-01-09 11:13:26] 2026-01-09 16:12:21,850 | INFO     | pid: 1661053
[2026-01-09 11:13:26] 2026-01-09 16:12:21,850 | INFO     | pgrp: 1661053
[2026-01-09 11:13:26] 2026-01-09 16:12:21,850 | INFO     | corecount: 5
[2026-01-09 11:13:26] 2026-01-09 16:12:21,850 | INFO     | event service: False
[2026-01-09 11:13:26] 2026-01-09 16:12:21,850 | INFO     | sizes: {0: 2284005, 1: 2284005, 3: 2284295, 11: 2284323, 10141: 2313048, 10142: 2322244, 10144: 2322446}
[2026-01-09 11:13:26] 2026-01-09 16:12:21,850 | INFO     | --------------------------------------------------
[2026-01-09 11:13:26] 2026-01-09 16:12:21,850 | INFO     | 
[2026-01-09 11:13:26] 2026-01-09 16:12:21,850 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-01-09 11:13:26] 2026-01-09 16:12:21,863 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 11:13:26] 2026-01-09 16:12:21,863 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 11:13:26] 2026-01-09 16:12:21,863 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 11:13:26] 2026-01-09 16:12:21,863 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 11:13:26] 2026-01-09 16:12:21,863 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 11:13:26] 2026-01-09 16:12:21,863 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 11:13:26] 2026-01-09 16:12:21,863 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 11:13:26] 2026-01-09 16:12:21,863 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 11:13:26] 2026-01-09 16:12:21,863 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 11:13:26] 2026-01-09 16:12:21,863 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 11:13:26] 2026-01-09 16:12:21,863 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 11:13:26] 2026-01-09 16:12:21,863 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 11:13:26] 2026-01-09 16:12:21,863 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 11:13:26] 2026-01-09 16:12:21,863 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 11:13:26] 2026-01-09 16:12:21,863 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 11:13:26] 2026-01-09 16:12:21,863 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 11:13:26] 2026-01-09 16:12:21,863 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 11:13:26] 2026-01-09 16:12:21,863 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 11:13:26] 2026-01-09 16:12:21,863 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 11:13:26] 2026-01-09 16:12:21,863 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 11:13:26] 2026-01-09 16:12:21,863 | INFO     | job 6963146894 has completed (purged errors)
[2026-01-09 11:13:26] 2026-01-09 16:12:21,864 | INFO     | overall cleanup function is called
[2026-01-09 11:13:26] 2026-01-09 16:12:22,870 | INFO     | --- collectZombieJob: --- 10, [1661053]
[2026-01-09 11:13:26] 2026-01-09 16:12:22,870 | INFO     | zombie collector waiting for pid 1661053
[2026-01-09 11:13:26] 2026-01-09 16:12:22,870 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 11:13:26] 2026-01-09 16:12:22,870 | INFO     | collected zombie processes
[2026-01-09 11:13:26] 2026-01-09 16:12:22,870 | INFO     | will attempt to kill all subprocesses of pid=1661053
[2026-01-09 11:13:26] 2026-01-09 16:12:22,966 | INFO     | process IDs to be killed: [1661053] (in reverse order)
[2026-01-09 11:13:26] 2026-01-09 16:12:23,008 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 11:13:26] 2026-01-09 16:12:23,008 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 11:13:26] 2026-01-09 16:12:23,011 | INFO     | did not find any defunct processes belonging to 1661053
[2026-01-09 11:13:26] 2026-01-09 16:12:23,015 | INFO     | did not find any defunct processes belonging to 1661053
[2026-01-09 11:13:26] 2026-01-09 16:12:23,015 | INFO     | ready for new job
[2026-01-09 11:13:26] 2026-01-09 16:12:23,015 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 11:13:26] 2026-01-09 16:12:23,017 | INFO     | ***************************************
[2026-01-09 11:13:26] 2026-01-09 16:12:23,017 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 11:13:26] 2026-01-09 16:12:23,017 | INFO     | ***************************************
[2026-01-09 11:13:26] 2026-01-09 16:12:23,017 | INFO     | 
[2026-01-09 11:13:26] 2026-01-09 16:12:23,018 | INFO     | architecture information:
[2026-01-09 11:13:26] 2026-01-09 16:12:23,018 | INFO     | executing command: cat /etc/os-release
[2026-01-09 11:13:26] 2026-01-09 16:12:23,027 | INFO     | cat /etc/os-release:
[2026-01-09 11:13:26] NAME="CentOS Linux"
[2026-01-09 11:13:26] VERSION="7 (Core)"
[2026-01-09 11:13:26] ID="centos"
[2026-01-09 11:13:26] ID_LIKE="rhel fedora"
[2026-01-09 11:13:26] VERSION_ID="7"
[2026-01-09 11:13:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 11:13:26] ANSI_COLOR="0;31"
[2026-01-09 11:13:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 11:13:26] HOME_URL="https://www.centos.org/"
[2026-01-09 11:13:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 11:13:26] 
[2026-01-09 11:13:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 11:13:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 11:13:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 11:13:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 11:13:26] 
[2026-01-09 11:13:26] 2026-01-09 16:12:23,027 | INFO     | ***************************************
[2026-01-09 11:13:26] 2026-01-09 16:12:23,529 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-01-09 11:13:26] 2026-01-09 16:12:23,539 | INFO     | sufficient remaining disk space (145455316992 B)
[2026-01-09 11:13:26] 2026-01-09 16:12:23,539 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 11:13:26] 2026-01-09 16:12:23,539 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 11:13:26] 2026-01-09 16:12:23,539 | INFO     | update_server=False
[2026-01-09 11:13:26] 2026-01-09 16:12:23,539 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 11:13:26] 2026-01-09 16:12:23,539 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:13:26] 2026-01-09 16:12:23,539 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 11:13:26] 2026-01-09 16:12:23,539 | INFO     | aborting loop
[2026-01-09 11:13:26] 2026-01-09 16:12:24,045 | INFO     | all data control threads have been joined
[2026-01-09 11:13:26] 2026-01-09 16:12:24,432 | INFO     | all payload control threads have been joined
[2026-01-09 11:13:26] 2026-01-09 16:12:24,541 | INFO     | [job] queue monitor thread has finished
[2026-01-09 11:13:26] 2026-01-09 16:12:24,544 | INFO     | [job] retrieve thread has finished
[2026-01-09 11:13:26] 2026-01-09 16:12:24,544 | INFO     | [job] job monitor thread has finished
[2026-01-09 11:13:26] 2026-01-09 16:12:24,568 | INFO     | [data] copytool_in thread has finished
[2026-01-09 11:13:26] 2026-01-09 16:12:24,810 | INFO     | all job control threads have been joined
[2026-01-09 11:13:26] 2026-01-09 16:12:24,926 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 11:13:26] 2026-01-09 16:12:25,051 | INFO     | [data] control thread has finished
[2026-01-09 11:13:26] 2026-01-09 16:12:25,437 | INFO     | [payload] control thread has finished
[2026-01-09 11:13:26] 2026-01-09 16:12:25,463 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 11:13:26] 2026-01-09 16:12:25,630 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 11:13:26] 2026-01-09 16:12:25,673 | INFO     | [payload] failed_post thread has finished
[2026-01-09 11:13:26] 2026-01-09 16:12:25,754 | INFO     | [job] validate thread has finished
[2026-01-09 11:13:26] 2026-01-09 16:12:25,815 | INFO     | [job] control thread has finished
[2026-01-09 11:13:26] 2026-01-09 16:12:25,947 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 11:13:26] 2026-01-09 16:12:25,963 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 11:13:26] 2026-01-09 16:12:26,102 | INFO     | [payload] validate_post thread has finished
[2026-01-09 11:13:26] 2026-01-09 16:12:26,931 | INFO     | [data] copytool_out thread has finished
[2026-01-09 11:13:26] 2026-01-09 16:12:29,468 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 11:13:26] 2026-01-09 16:12:34,250 | INFO     | job.realtimelogging is not enabled
[2026-01-09 11:13:26] 2026-01-09 16:12:35,254 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 11:13:26] 2026-01-09 16:12:53,748 | INFO     | PID=1643222 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 11:13:26] 2026-01-09 16:12:53,748 | INFO     | .. there are 8 such processes running
[2026-01-09 11:13:26] 2026-01-09 16:12:53,748 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 11:13:26] 2026-01-09 16:12:53,748 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 11:13:26] 2026-01-09 16:12:53,748 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 11:13:26] 2026-01-09 16:13:19,690 | INFO     | [monitor] cgroup control has ended
[2026-01-09 11:13:26] 2026-01-09 16:13:21,560 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125007748532032)>', '<ExcThread(monitor, started 125007405496064)>']
[2026-01-09 11:13:26] 2026-01-09 16:13:21,880 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 11:13:26] 2026-01-09 16:13:21,880 | INFO     | [monitor] control thread has ended
[2026-01-09 11:13:26] 2026-01-09 16:13:26,584 | INFO     | all workflow threads have been joined
[2026-01-09 11:13:26] 2026-01-09 16:13:26,584 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 11:13:26] 2026-01-09 16:13:26,585 | INFO     | traces error code: 0
[2026-01-09 11:13:26] 2026-01-09 16:13:26,585 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 11:13:26] 2026-01-09 16:13:26,657 [wrapper] ==== pilot stdout END ====
[2026-01-09 11:13:26] 2026-01-09 16:13:26,659 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 11:13:26] 2026-01-09 16:13:26,661 [wrapper] pilotpid: 1643222
[2026-01-09 11:13:26] 2026-01-09 16:13:26,662 [wrapper] Pilot exit status: 0
[2026-01-09 11:13:26] 2026-01-09 16:13:26,669 [wrapper] pandaids: 6963146894
[2026-01-09 11:13:26] 2026-01-09 16:13:26,702 [wrapper] cleanup supervisor_pilot 1833474 1643223
[2026-01-09 11:13:26] 2026-01-09 16:13:26,704 [wrapper] Test setup, not cleaning
[2026-01-09 11:13:26] 2026-01-09 16:13:26,706 [wrapper] apfmon messages muted
[2026-01-09 11:13:26] 2026-01-09 16:13:26,708 [wrapper] ==== wrapper stdout END ====
[2026-01-09 11:13:26] 2026-01-09 16:13:26,709 [wrapper] ==== wrapper stderr END ====
[2026-01-09 11:13:26]  *** Error codes and diagnostics ***
[2026-01-09 11:13:26]     "exeErrorCode": 0,
[2026-01-09 11:13:26]     "exeErrorDiag": "",
[2026-01-09 11:13:26]     "pilotErrorCode": 0,
[2026-01-09 11:13:26]     "pilotErrorDiag": "",
[2026-01-09 11:13:26]  *** Listing of results directory ***
[2026-01-09 11:13:26] total 446752
[2026-01-09 11:13:26] -rw-r--r-- 1 boinc boinc    579449 Jan  8 10:02 pilot3.tar.gz
[2026-01-09 11:13:26] -rwx------ 1 boinc boinc     36322 Jan  8 10:03 runpilot2-wrapper.sh
[2026-01-09 11:13:26] -rw-r--r-- 1 boinc boinc      5112 Jan  8 10:04 queuedata.json
[2026-01-09 11:13:26] -rw-r--r-- 1 boinc boinc       100 Jan  9 08:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 11:13:26] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 08:22 run_atlas
[2026-01-09 11:13:26] -rw-r--r-- 1 boinc boinc       105 Jan  9 08:22 job.xml
[2026-01-09 11:13:26] -rw-r--r-- 2 boinc boinc 224884186 Jan  9 08:22 EVNT.47898824._001072.pool.root.1
[2026-01-09 11:13:26] -rw-r--r-- 2 boinc boinc     15847 Jan  9 08:22 start_atlas.sh
[2026-01-09 11:13:26] drwxrwx--x 2 boinc boinc      4096 Jan  9 08:22 shared
[2026-01-09 11:13:26] -rw-r--r-- 2 boinc boinc    592400 Jan  9 08:22 input.tar.gz
[2026-01-09 11:13:26] -rw-r--r-- 1 boinc boinc      9742 Jan  9 08:22 init_data.xml
[2026-01-09 11:13:26] -rw-r--r-- 1 boinc boinc         0 Jan  9 08:22 boinc_setup_complete
[2026-01-09 11:13:26] -rw-r--r-- 1 boinc boinc         0 Jan  9 08:22 boinc_lockfile
[2026-01-09 11:13:26] -rw-r--r-- 1 boinc boinc      2519 Jan  9 08:22 pandaJob.out
[2026-01-09 11:13:26] -rw------- 1 boinc boinc    989377 Jan  9 08:23 agis_schedconf.cvmfs.json
[2026-01-09 11:13:26] -rw------- 1 boinc boinc   1516240 Jan  9 08:23 agis_ddmendpoints.agis.ALL.json
[2026-01-09 11:13:26] drwx------ 5 boinc boinc      4096 Jan  9 08:23 pilot3
[2026-01-09 11:13:26] -rw------- 1 boinc boinc 225003075 Jan  9 11:11 HITS.47898826._027197.pool.root.1
[2026-01-09 11:13:26] -rw------- 1 boinc boinc      1025 Jan  9 11:12 memory_monitor_summary.json
[2026-01-09 11:13:26] -rw------- 1 boinc boinc    375297 Jan  9 11:12 log.47898826._027197.job.log.tgz.1
[2026-01-09 11:13:26] -rw------- 1 boinc boinc      7756 Jan  9 11:12 heartbeat.json
[2026-01-09 11:13:26] -rw-r--r-- 1 boinc boinc       530 Jan  9 11:12 boinc_task_state.xml
[2026-01-09 11:13:26] -rw------- 1 boinc boinc        95 Jan  9 11:12 pilot_heartbeat.json
[2026-01-09 11:13:26] -rw-r--r-- 1 boinc boinc      8192 Jan  9 11:13 boinc_mmap_file
[2026-01-09 11:13:26] -rw-r--r-- 1 boinc boinc        28 Jan  9 11:13 wrapper_checkpoint.txt
[2026-01-09 11:13:26] -rw------- 1 boinc boinc      4903 Jan  9 11:13 pilotlog.txt
[2026-01-09 11:13:26] -rw------- 1 boinc boinc   1458059 Jan  9 11:13 log.47898826._027197.job.log.1
[2026-01-09 11:13:26] -rw------- 1 boinc boinc       357 Jan  9 11:13 output.list
[2026-01-09 11:13:26] -rw-r--r-- 1 boinc boinc       620 Jan  9 11:13 runtime_log
[2026-01-09 11:13:26] -rw------- 1 boinc boinc   1853440 Jan  9 11:13 result.tar.gz
[2026-01-09 11:13:26] -rw-r--r-- 1 boinc boinc      8893 Jan  9 11:13 runtime_log.err
[2026-01-09 11:13:26] -rw------- 1 boinc boinc       645 Jan  9 11:13 2mUNDmRj6x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrVfKDmtZO2tm.diag
[2026-01-09 11:13:26] -rw-r--r-- 1 boinc boinc     21124 Jan  9 11:13 stderr.txt
[2026-01-09 11:13:26] HITS file was successfully produced:
[2026-01-09 11:13:26] -rw------- 1 boinc boinc 225003075 Jan  9 11:11 shared/HITS.pool.root.1
[2026-01-09 11:13:26]  *** Contents of shared directory: ***
[2026-01-09 11:13:26] total 441764
[2026-01-09 11:13:26] -rw-r--r-- 2 boinc boinc 224884186 Jan  9 08:22 ATLAS.root_0
[2026-01-09 11:13:26] -rw-r--r-- 2 boinc boinc     15847 Jan  9 08:22 start_atlas.sh
[2026-01-09 11:13:26] -rw-r--r-- 2 boinc boinc    592400 Jan  9 08:22 input.tar.gz
[2026-01-09 11:13:26] -rw------- 1 boinc boinc 225003075 Jan  9 11:11 HITS.pool.root.1
[2026-01-09 11:13:26] -rw------- 1 boinc boinc   1853440 Jan  9 11:13 result.tar.gz
11:13:28 (1639374): run_atlas exited; CPU time 40388.089320
11:13:28 (1639374): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN