Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:38:37 (4146): wrapper (7.7.26015): starting
12:38:37 (4146): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 12:38:37] Arguments: --nthreads 8
[2026-01-09 12:38:37] Threads: 8
[2026-01-09 12:38:37] Checking for CVMFS
[2026-01-09 12:38:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 12:38:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 12:38:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 12:38:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 12:38:37] 2.11.2.0 21950 35364 95228 154942 0 56 22563087 25165825 0 130560 0 16998137 99.837 9554322 2981 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 12:38:37] CVMFS is ok
[2026-01-09 12:38:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 12:38:37] Checking for apptainer binary...
[2026-01-09 12:38:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 12:38:37] Running /usr/bin/apptainer --version
[2026-01-09 12:38:37] apptainer version 1.3.2-1.el7
[2026-01-09 12:38:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 12:38:39] cg-vwn481.simple-grid.lan
[2026-01-09 12:38:39] apptainer works
[2026-01-09 12:38:39] Set ATHENA_PROC_NUMBER=8
[2026-01-09 12:38:39] Set ATHENA_CORE_NUMBER=8
[2026-01-09 12:38:39] Starting ATLAS job with PandaID=6963075377
[2026-01-09 12:38:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 15:13:13]  *** The last 200 lines of the pilot log: ***
[2026-01-09 15:13:13] 2026-01-09 14:12:08,169 | INFO     | time since job start (9196s) is within the limit (174528.0s)
[2026-01-09 15:13:13] 2026-01-09 14:12:09,079 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 15:13:13] 2026-01-09 14:12:09,080 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-09 15:13:13] 2026-01-09 14:12:09,081 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6963075377/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 15:13:13] 2026-01-09 14:12:09,082 | INFO     | extracted standard info from prmon json
[2026-01-09 15:13:13] 2026-01-09 14:12:09,082 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 15:13:13] 2026-01-09 14:12:09,083 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 15:13:13] 2026-01-09 14:12:09,083 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 15:13:13] 2026-01-09 14:12:09,083 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 15:13:13] 2026-01-09 14:12:09,086 | INFO     | fitting pss+swap vs Time
[2026-01-09 15:13:13] 2026-01-09 14:12:09,087 | INFO     | sum of square deviations: 1067554900.0
[2026-01-09 15:13:13] 2026-01-09 14:12:09,088 | INFO     | sum of deviations: -25823933065.0
[2026-01-09 15:13:13] 2026-01-09 14:12:09,088 | INFO     | mean x: 1767963336.0
[2026-01-09 15:13:13] 2026-01-09 14:12:09,088 | INFO     | mean y: 2554264.715231788
[2026-01-09 15:13:13] 2026-01-09 14:12:09,088 | INFO     | intersect: 42769223079.81608
[2026-01-09 15:13:13] 2026-01-09 14:12:09,088 | INFO     | chi2: 2.345612408787773
[2026-01-09 15:13:13] 2026-01-09 14:12:09,089 | INFO     | sum of square deviations: 964976232.5
[2026-01-09 15:13:13] 2026-01-09 14:12:09,090 | INFO     | sum of deviations: -14290331682.500006
[2026-01-09 15:13:13] 2026-01-09 14:12:09,090 | INFO     | mean x: 1767963183.5
[2026-01-09 15:13:13] 2026-01-09 14:12:09,090 | INFO     | mean y: 2571015.9109589043
[2026-01-09 15:13:13] 2026-01-09 14:12:09,090 | INFO     | intersect: 26184335336.89243
[2026-01-09 15:13:13] 2026-01-09 14:12:09,090 | INFO     | chi2: 1.5836853729798224
[2026-01-09 15:13:13] 2026-01-09 14:12:09,091 | INFO     | current chi2=1.5836853729798224 (change=32.48307490842953 %)
[2026-01-09 15:13:13] 2026-01-09 14:12:09,091 | INFO     | sum of square deviations: 869188390.0
[2026-01-09 15:13:13] 2026-01-09 14:12:09,092 | INFO     | sum of deviations: -12886596663.0
[2026-01-09 15:13:13] 2026-01-09 14:12:09,092 | INFO     | mean x: 1767963031.0
[2026-01-09 15:13:13] 2026-01-09 14:12:09,092 | INFO     | mean y: 2573251.609929078
[2026-01-09 15:13:13] 2026-01-09 14:12:09,092 | INFO     | intersect: 26214412661.46671
[2026-01-09 15:13:13] 2026-01-09 14:12:09,092 | INFO     | chi2: 1.5836294786833307
[2026-01-09 15:13:13] 2026-01-09 14:12:09,092 | INFO     | current chi2=1.5836294786833307 (change=0.003529381368629808 %)
[2026-01-09 15:13:13] 2026-01-09 14:12:09,093 | INFO     | right removable region: 140
[2026-01-09 15:13:13] 2026-01-09 14:12:09,093 | INFO     | sum of square deviations: 964976232.5
[2026-01-09 15:13:13] 2026-01-09 14:12:09,094 | INFO     | sum of deviations: -47493656604.5
[2026-01-09 15:13:13] 2026-01-09 14:12:09,094 | INFO     | mean x: 1767963488.5
[2026-01-09 15:13:13] 2026-01-09 14:12:09,094 | INFO     | mean y: 2585959.5684931506
[2026-01-09 15:13:13] 2026-01-09 14:12:09,094 | INFO     | intersect: 87017216977.55357
[2026-01-09 15:13:13] 2026-01-09 14:12:09,094 | INFO     | chi2: 0.9376584731109192
[2026-01-09 15:13:13] 2026-01-09 14:12:09,095 | INFO     | current chi2=0.9376584731109192 (change=60.0250037219275 %)
[2026-01-09 15:13:13] 2026-01-09 14:12:09,095 | INFO     | sum of square deviations: 869188390.0
[2026-01-09 15:13:13] 2026-01-09 14:12:09,096 | INFO     | sum of deviations: -46068637953.0
[2026-01-09 15:13:13] 2026-01-09 14:12:09,096 | INFO     | mean x: 1767963641.0
[2026-01-09 15:13:13] 2026-01-09 14:12:09,096 | INFO     | mean y: 2583625.936170213
[2026-01-09 15:13:13] 2026-01-09 14:12:09,096 | INFO     | intersect: 93708019442.09644
[2026-01-09 15:13:13] 2026-01-09 14:12:09,096 | INFO     | chi2: 0.9194449518619043
[2026-01-09 15:13:13] 2026-01-09 14:12:09,097 | INFO     | current chi2=0.9194449518619043 (change=1.942447252525422 %)
[2026-01-09 15:13:13] 2026-01-09 14:12:09,097 | INFO     | left removable region: 20
[2026-01-09 15:13:13] 2026-01-09 14:12:09,097 | INFO     | sum of square deviations: 535786790.0
[2026-01-09 15:13:13] 2026-01-09 14:12:09,098 | INFO     | sum of deviations: -26390462513.000004
[2026-01-09 15:13:13] 2026-01-09 14:12:09,098 | INFO     | mean x: 1767963610.5
[2026-01-09 15:13:13] 2026-01-09 14:12:09,098 | INFO     | mean y: 2594619.2
[2026-01-09 15:13:13] 2026-01-09 14:12:09,098 | INFO     | intersect: 87084579950.05968
[2026-01-09 15:13:13] 2026-01-09 14:12:09,098 | INFO     | chi2: 0.11492673248946611
[2026-01-09 15:13:13] 2026-01-09 14:12:09,098 | INFO     | current memory leak: -49.26 B/s (using 120 data points, chi2=0.11)
[2026-01-09 15:13:13] 2026-01-09 14:12:09,099 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-01-09 15:13:13] 2026-01-09 14:12:09,099 | INFO     | ..............................
[2026-01-09 15:13:13] 2026-01-09 14:12:09,099 | INFO     | . Timing measurements:
[2026-01-09 15:13:13] 2026-01-09 14:12:09,099 | INFO     | . get job = 0 s
[2026-01-09 15:13:13] 2026-01-09 14:12:09,099 | INFO     | . initial setup = 1 s
[2026-01-09 15:13:13] 2026-01-09 14:12:09,100 | INFO     | . payload setup = 6 s
[2026-01-09 15:13:13] 2026-01-09 14:12:09,100 | INFO     | . stage-in = 0 s
[2026-01-09 15:13:13] 2026-01-09 14:12:09,100 | INFO     | . payload execution = 9160 s
[2026-01-09 15:13:13] 2026-01-09 14:12:09,100 | INFO     | . stage-out = 0 s
[2026-01-09 15:13:13] 2026-01-09 14:12:09,100 | INFO     | . log creation = 0 s
[2026-01-09 15:13:13] 2026-01-09 14:12:09,100 | INFO     | ..............................
[2026-01-09 15:13:13] 2026-01-09 14:12:09,223 | INFO     | 
[2026-01-09 15:13:13] 2026-01-09 14:12:09,224 | INFO     | job summary report
[2026-01-09 15:13:13] 2026-01-09 14:12:09,224 | INFO     | --------------------------------------------------
[2026-01-09 15:13:13] 2026-01-09 14:12:09,224 | INFO     | PanDA job id: 6963075377
[2026-01-09 15:13:13] 2026-01-09 14:12:09,224 | INFO     | task id: 47898826
[2026-01-09 15:13:13] 2026-01-09 14:12:09,224 | INFO     | errors: (none)
[2026-01-09 15:13:13] 2026-01-09 14:12:09,224 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 15:13:13] 2026-01-09 14:12:09,224 | INFO     | pilot state: finished 
[2026-01-09 15:13:13] 2026-01-09 14:12:09,224 | INFO     | transexitcode: 0
[2026-01-09 15:13:13] 2026-01-09 14:12:09,225 | INFO     | exeerrorcode: 0
[2026-01-09 15:13:13] 2026-01-09 14:12:09,225 | INFO     | exeerrordiag: 
[2026-01-09 15:13:13] 2026-01-09 14:12:09,225 | INFO     | exitcode: 0
[2026-01-09 15:13:13] 2026-01-09 14:12:09,225 | INFO     | exitmsg: OK
[2026-01-09 15:13:13] 2026-01-09 14:12:09,225 | INFO     | cpuconsumptiontime: 68765 s
[2026-01-09 15:13:13] 2026-01-09 14:12:09,225 | INFO     | nevents: 400
[2026-01-09 15:13:13] 2026-01-09 14:12:09,225 | INFO     | neventsw: 0
[2026-01-09 15:13:13] 2026-01-09 14:12:09,225 | INFO     | pid: 14338
[2026-01-09 15:13:13] 2026-01-09 14:12:09,225 | INFO     | pgrp: 14338
[2026-01-09 15:13:13] 2026-01-09 14:12:09,225 | INFO     | corecount: 8
[2026-01-09 15:13:13] 2026-01-09 14:12:09,225 | INFO     | event service: False
[2026-01-09 15:13:13] 2026-01-09 14:12:09,226 | INFO     | sizes: {0: 2283799, 1: 2283998, 5: 2284260, 11: 2284316, 9170: 2312195, 9172: 2321379, 9181: 2321517}
[2026-01-09 15:13:13] 2026-01-09 14:12:09,226 | INFO     | --------------------------------------------------
[2026-01-09 15:13:13] 2026-01-09 14:12:09,226 | INFO     | 
[2026-01-09 15:13:13] 2026-01-09 14:12:09,226 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-01-09 15:13:13] 2026-01-09 14:12:09,252 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 15:13:13] 2026-01-09 14:12:09,252 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 15:13:13] 2026-01-09 14:12:09,252 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 15:13:13] 2026-01-09 14:12:09,252 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 15:13:13] 2026-01-09 14:12:09,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 15:13:13] 2026-01-09 14:12:09,253 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 15:13:13] 2026-01-09 14:12:09,253 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 15:13:13] 2026-01-09 14:12:09,253 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 15:13:13] 2026-01-09 14:12:09,253 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 15:13:13] 2026-01-09 14:12:09,253 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 15:13:13] 2026-01-09 14:12:09,253 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 15:13:13] 2026-01-09 14:12:09,253 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 15:13:13] 2026-01-09 14:12:09,253 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 15:13:13] 2026-01-09 14:12:09,253 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 15:13:13] 2026-01-09 14:12:09,253 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 15:13:13] 2026-01-09 14:12:09,254 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 15:13:13] 2026-01-09 14:12:09,254 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 15:13:13] 2026-01-09 14:12:09,254 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 15:13:13] 2026-01-09 14:12:09,254 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 15:13:13] 2026-01-09 14:12:09,254 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 15:13:13] 2026-01-09 14:12:09,254 | INFO     | job 6963075377 has completed (purged errors)
[2026-01-09 15:13:13] 2026-01-09 14:12:09,254 | INFO     | overall cleanup function is called
[2026-01-09 15:13:13] 2026-01-09 14:12:10,262 | INFO     | --- collectZombieJob: --- 10, [14338]
[2026-01-09 15:13:13] 2026-01-09 14:12:10,262 | INFO     | zombie collector waiting for pid 14338
[2026-01-09 15:13:13] 2026-01-09 14:12:10,263 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 15:13:13] 2026-01-09 14:12:10,263 | INFO     | collected zombie processes
[2026-01-09 15:13:13] 2026-01-09 14:12:10,263 | INFO     | will attempt to kill all subprocesses of pid=14338
[2026-01-09 15:13:13] 2026-01-09 14:12:10,320 | INFO     | process IDs to be killed: [14338] (in reverse order)
[2026-01-09 15:13:13] 2026-01-09 14:12:10,367 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 15:13:13] 2026-01-09 14:12:10,368 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 15:13:13] 2026-01-09 14:12:10,369 | INFO     | did not find any defunct processes belonging to 14338
[2026-01-09 15:13:13] 2026-01-09 14:12:10,371 | INFO     | did not find any defunct processes belonging to 14338
[2026-01-09 15:13:13] 2026-01-09 14:12:10,371 | INFO     | ready for new job
[2026-01-09 15:13:13] 2026-01-09 14:12:10,371 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 15:13:13] 2026-01-09 14:12:10,373 | INFO     | ***************************************
[2026-01-09 15:13:13] 2026-01-09 14:12:10,373 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 15:13:13] 2026-01-09 14:12:10,373 | INFO     | ***************************************
[2026-01-09 15:13:13] 2026-01-09 14:12:10,373 | INFO     | 
[2026-01-09 15:13:13] 2026-01-09 14:12:10,374 | INFO     | pilot is running in a VM
[2026-01-09 15:13:13] 2026-01-09 14:12:10,374 | INFO     | architecture information:
[2026-01-09 15:13:13] 2026-01-09 14:12:10,374 | INFO     | executing command: cat /etc/os-release
[2026-01-09 15:13:13] 2026-01-09 14:12:10,392 | INFO     | cat /etc/os-release:
[2026-01-09 15:13:13] NAME="CentOS Linux"
[2026-01-09 15:13:13] VERSION="7 (Core)"
[2026-01-09 15:13:13] ID="centos"
[2026-01-09 15:13:13] ID_LIKE="rhel fedora"
[2026-01-09 15:13:13] VERSION_ID="7"
[2026-01-09 15:13:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 15:13:13] ANSI_COLOR="0;31"
[2026-01-09 15:13:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 15:13:13] HOME_URL="https://www.centos.org/"
[2026-01-09 15:13:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 15:13:13] 
[2026-01-09 15:13:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 15:13:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 15:13:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 15:13:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 15:13:13] 
[2026-01-09 15:13:13] 2026-01-09 14:12:10,392 | INFO     | ***************************************
[2026-01-09 15:13:13] 2026-01-09 14:12:10,895 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-01-09 15:13:13] 2026-01-09 14:12:10,917 | INFO     | sufficient remaining disk space (498292752384 B)
[2026-01-09 15:13:13] 2026-01-09 14:12:10,917 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 15:13:13] 2026-01-09 14:12:10,917 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 15:13:13] 2026-01-09 14:12:10,917 | INFO     | update_server=False
[2026-01-09 15:13:13] 2026-01-09 14:12:10,918 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 15:13:13] 2026-01-09 14:12:10,918 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:13:13] 2026-01-09 14:12:10,918 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 15:13:13] 2026-01-09 14:12:10,922 | INFO     | all payload control threads have been joined
[2026-01-09 15:13:13] 2026-01-09 14:12:10,975 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 15:13:13] 2026-01-09 14:12:11,346 | INFO     | all job control threads have been joined
[2026-01-09 15:13:13] 2026-01-09 14:12:11,473 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:13:13] 2026-01-09 14:12:11,473 | INFO     | aborting loop
[2026-01-09 15:13:13] 2026-01-09 14:12:11,652 | INFO     | all data control threads have been joined
[2026-01-09 15:13:13] 2026-01-09 14:12:11,919 | INFO     | [job] queue monitor thread has finished
[2026-01-09 15:13:13] 2026-01-09 14:12:11,919 | INFO     | [job] retrieve thread has finished
[2026-01-09 15:13:13] 2026-01-09 14:12:11,927 | INFO     | [payload] control thread has finished
[2026-01-09 15:13:13] 2026-01-09 14:12:12,197 | INFO     | [data] copytool_in thread has finished
[2026-01-09 15:13:13] 2026-01-09 14:12:12,287 | INFO     | [payload] validate_post thread has finished
[2026-01-09 15:13:13] 2026-01-09 14:12:12,339 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 15:13:13] 2026-01-09 14:12:12,351 | INFO     | [job] control thread has finished
[2026-01-09 15:13:13] 2026-01-09 14:12:12,479 | INFO     | [job] job monitor thread has finished
[2026-01-09 15:13:13] 2026-01-09 14:12:12,657 | INFO     | [data] control thread has finished
[2026-01-09 15:13:13] 2026-01-09 14:12:12,738 | INFO     | [job] validate thread has finished
[2026-01-09 15:13:13] 2026-01-09 14:12:12,852 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 15:13:13] 2026-01-09 14:12:12,870 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 15:13:13] 2026-01-09 14:12:12,924 | INFO     | [data] copytool_out thread has finished
[2026-01-09 15:13:13] 2026-01-09 14:12:13,161 | INFO     | [payload] failed_post thread has finished
[2026-01-09 15:13:13] 2026-01-09 14:12:14,982 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 15:13:13] 2026-01-09 14:12:21,932 | INFO     | job.realtimelogging is not enabled
[2026-01-09 15:13:13] 2026-01-09 14:12:22,938 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 15:13:13] 2026-01-09 14:12:41,258 | INFO     | PID=7910 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 15:13:13] 2026-01-09 14:12:41,259 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 15:13:13] 2026-01-09 14:12:41,259 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 15:13:13] 2026-01-09 14:12:41,259 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 15:13:13] 2026-01-09 14:13:06,919 | INFO     | [monitor] cgroup control has ended
[2026-01-09 15:13:13] 2026-01-09 14:13:08,634 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140011734730560)>', '<ExcThread(monitor, started 140011169117952)>']
[2026-01-09 15:13:13] 2026-01-09 14:13:09,315 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 15:13:13] 2026-01-09 14:13:09,315 | INFO     | [monitor] control thread has ended
[2026-01-09 15:13:13] 2026-01-09 14:13:13,659 | INFO     | all workflow threads have been joined
[2026-01-09 15:13:13] 2026-01-09 14:13:13,659 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 15:13:13] 2026-01-09 14:13:13,660 | INFO     | traces error code: 0
[2026-01-09 15:13:13] 2026-01-09 14:13:13,660 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 15:13:13] 2026-01-09 14:13:13,792 [wrapper] ==== pilot stdout END ====
[2026-01-09 15:13:13] 2026-01-09 14:13:13,795 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 15:13:13] 2026-01-09 14:13:13,799 [wrapper] pilotpid: 7910
[2026-01-09 15:13:13] 2026-01-09 14:13:13,803 [wrapper] Pilot exit status: 0
[2026-01-09 15:13:13] 2026-01-09 14:13:13,815 [wrapper] pandaids: 6963075377
[2026-01-09 15:13:13] 2026-01-09 14:13:13,847 [wrapper] cleanup supervisor_pilot 31134 7911
[2026-01-09 15:13:13] 2026-01-09 14:13:13,851 [wrapper] Test setup, not cleaning
[2026-01-09 15:13:13] 2026-01-09 14:13:13,854 [wrapper] apfmon messages muted
[2026-01-09 15:13:13] 2026-01-09 14:13:13,857 [wrapper] ==== wrapper stdout END ====
[2026-01-09 15:13:13] 2026-01-09 14:13:13,860 [wrapper] ==== wrapper stderr END ====
[2026-01-09 15:13:13]  *** Error codes and diagnostics ***
[2026-01-09 15:13:13]     "exeErrorCode": 0,
[2026-01-09 15:13:13]     "exeErrorDiag": "",
[2026-01-09 15:13:13]     "pilotErrorCode": 0,
[2026-01-09 15:13:13]     "pilotErrorDiag": "",
[2026-01-09 15:13:13]  *** Listing of results directory ***
[2026-01-09 15:13:13] total 440116
[2026-01-09 15:13:13] -rw-r--r--. 1 boinc boinc    579449 Jan  8 12:09 pilot3.tar.gz
[2026-01-09 15:13:13] -rwx------. 1 boinc boinc     36322 Jan  8 12:10 runpilot2-wrapper.sh
[2026-01-09 15:13:13] -rw-r--r--. 1 boinc boinc      5112 Jan  8 12:12 queuedata.json
[2026-01-09 15:13:13] -rw-r--r--. 1 boinc boinc       100 Jan  9 12:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 15:13:13] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 12:38 run_atlas
[2026-01-09 15:13:13] -rw-r--r--. 1 boinc boinc       105 Jan  9 12:38 job.xml
[2026-01-09 15:13:13] -rw-r--r--. 2 boinc boinc 223597005 Jan  9 12:38 EVNT.47898824._000936.pool.root.1
[2026-01-09 15:13:13] -rw-r--r--. 1 boinc boinc      6391 Jan  9 12:38 init_data.xml
[2026-01-09 15:13:13] -rw-r--r--. 2 boinc boinc     15847 Jan  9 12:38 start_atlas.sh
[2026-01-09 15:13:13] drwxrwx--x. 2 boinc boinc        68 Jan  9 12:38 shared
[2026-01-09 15:13:13] -rw-r--r--. 2 boinc boinc    592397 Jan  9 12:38 input.tar.gz
[2026-01-09 15:13:13] -rw-r--r--. 1 boinc boinc         0 Jan  9 12:38 boinc_lockfile
[2026-01-09 15:13:13] -rw-r--r--. 1 boinc boinc      2519 Jan  9 12:38 pandaJob.out
[2026-01-09 15:13:13] -rw-------. 1 boinc boinc    989377 Jan  9 12:38 agis_schedconf.cvmfs.json
[2026-01-09 15:13:13] -rw-------. 1 boinc boinc   1516240 Jan  9 12:38 agis_ddmendpoints.agis.ALL.json
[2026-01-09 15:13:13] drwx------. 5 boinc boinc      4096 Jan  9 12:38 pilot3
[2026-01-09 15:13:13] -rw-------. 1 boinc boinc 219945443 Jan  9 15:11 HITS.47898826._023487.pool.root.1
[2026-01-09 15:13:13] -rw-r--r--. 1 boinc boinc       529 Jan  9 15:11 boinc_task_state.xml
[2026-01-09 15:13:13] -rw-------. 1 boinc boinc      1030 Jan  9 15:11 memory_monitor_summary.json
[2026-01-09 15:13:13] -rw-------. 1 boinc boinc    384283 Jan  9 15:11 log.47898826._023487.job.log.tgz.1
[2026-01-09 15:13:13] -rw-------. 1 boinc boinc      7776 Jan  9 15:12 heartbeat.json
[2026-01-09 15:13:13] -rw-------. 1 boinc boinc        95 Jan  9 15:12 pilot_heartbeat.json
[2026-01-09 15:13:13] -rw-r--r--. 1 boinc boinc      8192 Jan  9 15:13 boinc_mmap_file
[2026-01-09 15:13:13] -rw-r--r--. 1 boinc boinc        27 Jan  9 15:13 wrapper_checkpoint.txt
[2026-01-09 15:13:13] -rw-------. 1 boinc boinc      4881 Jan  9 15:13 pilotlog.txt
[2026-01-09 15:13:13] -rw-------. 1 boinc boinc   1235902 Jan  9 15:13 log.47898826._023487.job.log.1
[2026-01-09 15:13:13] -rw-------. 1 boinc boinc       357 Jan  9 15:13 output.list
[2026-01-09 15:13:13] -rw-r--r--. 1 boinc boinc       620 Jan  9 15:13 runtime_log
[2026-01-09 15:13:13] -rw-------. 1 boinc boinc   1638400 Jan  9 15:13 result.tar.gz
[2026-01-09 15:13:13] -rw-r--r--. 1 boinc boinc      8832 Jan  9 15:13 runtime_log.err
[2026-01-09 15:13:13] -rw-------. 1 boinc boinc       652 Jan  9 15:13 95MODmL52x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmMkKDmxlLDin.diag
[2026-01-09 15:13:13] -rw-r--r--. 1 boinc boinc     20680 Jan  9 15:13 stderr.txt
[2026-01-09 15:13:14] HITS file was successfully produced:
[2026-01-09 15:13:14] -rw-------. 1 boinc boinc 219945443 Jan  9 15:11 shared/HITS.pool.root.1
[2026-01-09 15:13:14]  *** Contents of shared directory: ***
[2026-01-09 15:13:14] total 435348
[2026-01-09 15:13:14] -rw-r--r--. 2 boinc boinc 223597005 Jan  9 12:38 ATLAS.root_0
[2026-01-09 15:13:14] -rw-r--r--. 2 boinc boinc     15847 Jan  9 12:38 start_atlas.sh
[2026-01-09 15:13:14] -rw-r--r--. 2 boinc boinc    592397 Jan  9 12:38 input.tar.gz
[2026-01-09 15:13:14] -rw-------. 1 boinc boinc 219945443 Jan  9 15:11 HITS.pool.root.1
[2026-01-09 15:13:14] -rw-------. 1 boinc boinc   1638400 Jan  9 15:13 result.tar.gz
15:13:15 (4146): run_atlas exited; CPU time 68822.865645
15:13:15 (4146): called boinc_finish(0)

</stderr_txt>
]]>

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