Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:56:03 (15954): wrapper (7.7.26015): starting
03:56:03 (15954): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 03:56:03] Arguments: --nthreads 12
[2026-01-09 03:56:03] Threads: 12
[2026-01-09 03:56:03] Checking for CVMFS
[2026-01-09 03:56:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 03:56:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 03:56:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 03:56:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 03:56:04] 2.11.2.0 6893 180743 98284 154937 0 59 17426011 20275200 1 130560 0 69653168 99.906 10308022 35097 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 03:56:04] CVMFS is ok
[2026-01-09 03:56:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 03:56:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 03:56:04] Further information can be found at the LHC@home message board.
[2026-01-09 03:56:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 03:56:04] Checking for apptainer binary...
[2026-01-09 03:56:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 03:56:04] Running /usr/bin/apptainer --version
[2026-01-09 03:56:04] apptainer version 1.3.2-1.el7
[2026-01-09 03:56:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 03:56:05] c-205-3.aglt2.org
[2026-01-09 03:56:05] apptainer works
[2026-01-09 03:56:05] Set ATHENA_PROC_NUMBER=12
[2026-01-09 03:56:05] Set ATHENA_CORE_NUMBER=12
[2026-01-09 03:56:05] Starting ATLAS job with PandaID=6963146406
[2026-01-09 03:56:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 05:39:32]  *** The last 200 lines of the pilot log: ***
[2026-01-09 05:39:32] 2026-01-09 10:39:14,361 | INFO     | right removable region: 95
[2026-01-09 05:39:32] 2026-01-09 10:39:14,361 | INFO     | sum of square deviations: 274312120.0
[2026-01-09 05:39:32] 2026-01-09 10:39:14,361 | INFO     | sum of deviations: -6276167054.5
[2026-01-09 05:39:32] 2026-01-09 10:39:14,361 | INFO     | mean x: 1767952201.5
[2026-01-09 05:39:32] 2026-01-09 10:39:14,361 | INFO     | mean y: 2706051.0520833335
[2026-01-09 05:39:32] 2026-01-09 10:39:14,362 | INFO     | intersect: 40452844969.394615
[2026-01-09 05:39:32] 2026-01-09 10:39:14,362 | INFO     | chi2: 0.08591731877775532
[2026-01-09 05:39:32] 2026-01-09 10:39:14,362 | INFO     | current chi2=0.08591731877775532 (change=93.38468194900713 %)
[2026-01-09 05:39:32] 2026-01-09 10:39:14,362 | INFO     | sum of square deviations: 233641590.0
[2026-01-09 05:39:32] 2026-01-09 10:39:14,362 | INFO     | sum of deviations: -5212099433.0
[2026-01-09 05:39:32] 2026-01-09 10:39:14,363 | INFO     | mean x: 1767952354.0
[2026-01-09 05:39:32] 2026-01-09 10:39:14,363 | INFO     | mean y: 2701829.4285714286
[2026-01-09 05:39:32] 2026-01-09 10:39:14,363 | INFO     | intersect: 39442355796.2348
[2026-01-09 05:39:32] 2026-01-09 10:39:14,363 | INFO     | chi2: 0.06373270318134751
[2026-01-09 05:39:32] 2026-01-09 10:39:14,363 | INFO     | current chi2=0.06373270318134751 (change=25.820889096636463 %)
[2026-01-09 05:39:32] 2026-01-09 10:39:14,364 | INFO     | sum of square deviations: 197203697.5
[2026-01-09 05:39:32] 2026-01-09 10:39:14,364 | INFO     | sum of deviations: -2117341811.5
[2026-01-09 05:39:32] 2026-01-09 10:39:14,364 | INFO     | mean x: 1767952506.5
[2026-01-09 05:39:32] 2026-01-09 10:39:14,364 | INFO     | mean y: 2688849.2906976743
[2026-01-09 05:39:32] 2026-01-09 10:39:14,364 | INFO     | intersect: 18984887510.949543
[2026-01-09 05:39:32] 2026-01-09 10:39:14,364 | INFO     | chi2: 0.04204965114542477
[2026-01-09 05:39:32] 2026-01-09 10:39:14,365 | INFO     | current chi2=0.04204965114542477 (change=34.021861546065196 %)
[2026-01-09 05:39:32] 2026-01-09 10:39:14,365 | INFO     | sum of square deviations: 164765880.0
[2026-01-09 05:39:32] 2026-01-09 10:39:14,365 | INFO     | sum of deviations: 1118695958.0
[2026-01-09 05:39:32] 2026-01-09 10:39:14,365 | INFO     | mean x: 1767952659.0
[2026-01-09 05:39:32] 2026-01-09 10:39:14,365 | INFO     | mean y: 2673615.061728395
[2026-01-09 05:39:32] 2026-01-09 10:39:14,365 | INFO     | intersect: -12001034273.723574
[2026-01-09 05:39:32] 2026-01-09 10:39:14,366 | INFO     | chi2: 0.0001653994217842033
[2026-01-09 05:39:32] 2026-01-09 10:39:14,366 | INFO     | current chi2=0.0001653994217842033 (change=99.60665685141552 %)
[2026-01-09 05:39:32] 2026-01-09 10:39:14,366 | INFO     | sum of square deviations: 136095575.0
[2026-01-09 05:39:32] 2026-01-09 10:39:14,366 | INFO     | sum of deviations: 806685197.4999999
[2026-01-09 05:39:32] 2026-01-09 10:39:14,366 | INFO     | mean x: 1767952811.5
[2026-01-09 05:39:32] 2026-01-09 10:39:14,366 | INFO     | mean y: 2675268.3815789474
[2026-01-09 05:39:32] 2026-01-09 10:39:14,367 | INFO     | intersect: -10476588020.7853
[2026-01-09 05:39:32] 2026-01-09 10:39:14,367 | INFO     | chi2: 7.635354684552177e-05
[2026-01-09 05:39:32] 2026-01-09 10:39:14,367 | INFO     | current chi2=7.635354684552177e-05 (change=53.8368719661304 %)
[2026-01-09 05:39:32] 2026-01-09 10:39:14,367 | INFO     | sum of square deviations: 110960220.0
[2026-01-09 05:39:32] 2026-01-09 10:39:14,367 | INFO     | sum of deviations: 614454769.0000001
[2026-01-09 05:39:32] 2026-01-09 10:39:14,368 | INFO     | mean x: 1767952964.0
[2026-01-09 05:39:32] 2026-01-09 10:39:14,368 | INFO     | mean y: 2676428.3661971833
[2026-01-09 05:39:32] 2026-01-09 10:39:14,368 | INFO     | intersect: -9787563083.573177
[2026-01-09 05:39:32] 2026-01-09 10:39:14,368 | INFO     | chi2: 5.9054974950849925e-05
[2026-01-09 05:39:32] 2026-01-09 10:39:14,368 | INFO     | current chi2=5.9054974950849925e-05 (change=22.655885167548604 %)
[2026-01-09 05:39:32] 2026-01-09 10:39:14,368 | INFO     | left removable region: 60
[2026-01-09 05:39:32] 2026-01-09 10:39:14,368 | INFO     | sum of square deviations: 13283970.0
[2026-01-09 05:39:32] 2026-01-09 10:39:14,369 | INFO     | sum of deviations: 48660004.99999999
[2026-01-09 05:39:32] 2026-01-09 10:39:14,369 | INFO     | mean x: 1767953696.0
[2026-01-09 05:39:32] 2026-01-09 10:39:14,369 | INFO     | mean y: 2681713.0857142857
[2026-01-09 05:39:32] 2026-01-09 10:39:14,369 | INFO     | intersect: -6473442193.180896
[2026-01-09 05:39:32] 2026-01-09 10:39:14,369 | INFO     | chi2: 2.423328200296696e-05
[2026-01-09 05:39:32] 2026-01-09 10:39:14,369 | INFO     | current memory leak: 3.66 B/s (using 35 data points, chi2=0.00)
[2026-01-09 05:39:32] 2026-01-09 10:39:14,369 | INFO     | could have reported an average CPU frequency of 2202 MHz (7 samples)
[2026-01-09 05:39:32] 2026-01-09 10:39:14,370 | INFO     | ..............................
[2026-01-09 05:39:32] 2026-01-09 10:39:14,370 | INFO     | . Timing measurements:
[2026-01-09 05:39:32] 2026-01-09 10:39:14,370 | INFO     | . get job = 0 s
[2026-01-09 05:39:32] 2026-01-09 10:39:14,370 | INFO     | . initial setup = 2 s
[2026-01-09 05:39:32] 2026-01-09 10:39:14,370 | INFO     | . payload setup = 4 s
[2026-01-09 05:39:32] 2026-01-09 10:39:14,370 | INFO     | . stage-in = 0 s
[2026-01-09 05:39:32] 2026-01-09 10:39:14,370 | INFO     | . payload execution = 6147 s
[2026-01-09 05:39:32] 2026-01-09 10:39:14,370 | INFO     | . stage-out = 0 s
[2026-01-09 05:39:32] 2026-01-09 10:39:14,370 | INFO     | . log creation = 0 s
[2026-01-09 05:39:32] 2026-01-09 10:39:14,370 | INFO     | ..............................
[2026-01-09 05:39:32] 2026-01-09 10:39:14,459 | INFO     | time since job start (6178s) is within the limit (349056.0s)
[2026-01-09 05:39:32] 2026-01-09 10:39:14,682 | INFO     | 
[2026-01-09 05:39:32] 2026-01-09 10:39:14,682 | INFO     | job summary report
[2026-01-09 05:39:32] 2026-01-09 10:39:14,682 | INFO     | --------------------------------------------------
[2026-01-09 05:39:32] 2026-01-09 10:39:14,683 | INFO     | PanDA job id: 6963146406
[2026-01-09 05:39:32] 2026-01-09 10:39:14,683 | INFO     | task id: 47898826
[2026-01-09 05:39:32] 2026-01-09 10:39:14,683 | INFO     | errors: (none)
[2026-01-09 05:39:32] 2026-01-09 10:39:14,683 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 05:39:32] 2026-01-09 10:39:14,683 | INFO     | pilot state: finished 
[2026-01-09 05:39:32] 2026-01-09 10:39:14,683 | INFO     | transexitcode: 0
[2026-01-09 05:39:32] 2026-01-09 10:39:14,684 | INFO     | exeerrorcode: 0
[2026-01-09 05:39:32] 2026-01-09 10:39:14,684 | INFO     | exeerrordiag: 
[2026-01-09 05:39:32] 2026-01-09 10:39:14,684 | INFO     | exitcode: 0
[2026-01-09 05:39:32] 2026-01-09 10:39:14,684 | INFO     | exitmsg: OK
[2026-01-09 05:39:32] 2026-01-09 10:39:14,684 | INFO     | cpuconsumptiontime: 64867 s
[2026-01-09 05:39:32] 2026-01-09 10:39:14,684 | INFO     | nevents: 400
[2026-01-09 05:39:32] 2026-01-09 10:39:14,685 | INFO     | neventsw: 0
[2026-01-09 05:39:32] 2026-01-09 10:39:14,685 | INFO     | pid: 26309
[2026-01-09 05:39:32] 2026-01-09 10:39:14,685 | INFO     | pgrp: 26309
[2026-01-09 05:39:32] 2026-01-09 10:39:14,685 | INFO     | corecount: 12
[2026-01-09 05:39:32] 2026-01-09 10:39:14,685 | INFO     | event service: False
[2026-01-09 05:39:32] 2026-01-09 10:39:14,685 | INFO     | sizes: {0: 2283969, 4: 2284231, 11: 2284259, 6155: 2311181, 6157: 2320179, 6159: 2320235, 6164: 2320557}
[2026-01-09 05:39:32] 2026-01-09 10:39:14,686 | INFO     | --------------------------------------------------
[2026-01-09 05:39:32] 2026-01-09 10:39:14,686 | INFO     | 
[2026-01-09 05:39:32] 2026-01-09 10:39:14,686 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 05:39:32] 2026-01-09 10:39:14,710 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 05:39:32] 2026-01-09 10:39:14,711 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 05:39:32] 2026-01-09 10:39:14,711 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 05:39:32] 2026-01-09 10:39:14,711 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 05:39:32] 2026-01-09 10:39:14,711 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 05:39:32] 2026-01-09 10:39:14,711 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 05:39:32] 2026-01-09 10:39:14,712 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 05:39:32] 2026-01-09 10:39:14,712 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 05:39:32] 2026-01-09 10:39:14,712 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 05:39:32] 2026-01-09 10:39:14,712 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 05:39:32] 2026-01-09 10:39:14,712 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 05:39:32] 2026-01-09 10:39:14,713 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 05:39:32] 2026-01-09 10:39:14,713 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 05:39:32] 2026-01-09 10:39:14,713 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 05:39:32] 2026-01-09 10:39:14,713 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 05:39:32] 2026-01-09 10:39:14,713 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 05:39:32] 2026-01-09 10:39:14,713 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 05:39:32] 2026-01-09 10:39:14,713 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 05:39:32] 2026-01-09 10:39:14,714 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 05:39:32] 2026-01-09 10:39:14,714 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 05:39:32] 2026-01-09 10:39:14,714 | INFO     | job 6963146406 has completed (purged errors)
[2026-01-09 05:39:32] 2026-01-09 10:39:14,714 | INFO     | overall cleanup function is called
[2026-01-09 05:39:32] 2026-01-09 10:39:15,580 | INFO     | PID=19921 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 05:39:32] 2026-01-09 10:39:15,722 | INFO     | --- collectZombieJob: --- 10, [26309]
[2026-01-09 05:39:32] 2026-01-09 10:39:15,722 | INFO     | zombie collector waiting for pid 26309
[2026-01-09 05:39:32] 2026-01-09 10:39:15,723 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 05:39:32] 2026-01-09 10:39:15,723 | INFO     | collected zombie processes
[2026-01-09 05:39:32] 2026-01-09 10:39:15,723 | INFO     | will attempt to kill all subprocesses of pid=26309
[2026-01-09 05:39:32] 2026-01-09 10:39:15,815 | INFO     | process IDs to be killed: [26309] (in reverse order)
[2026-01-09 05:39:32] 2026-01-09 10:39:15,865 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 05:39:32] 2026-01-09 10:39:15,866 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 05:39:32] 2026-01-09 10:39:15,868 | INFO     | did not find any defunct processes belonging to 26309
[2026-01-09 05:39:32] 2026-01-09 10:39:15,871 | INFO     | did not find any defunct processes belonging to 26309
[2026-01-09 05:39:32] 2026-01-09 10:39:15,871 | INFO     | ready for new job
[2026-01-09 05:39:32] 2026-01-09 10:39:15,871 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 05:39:32] 2026-01-09 10:39:15,872 | INFO     | ***************************************
[2026-01-09 05:39:32] 2026-01-09 10:39:15,872 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 05:39:32] 2026-01-09 10:39:15,873 | INFO     | ***************************************
[2026-01-09 05:39:32] 2026-01-09 10:39:15,873 | INFO     | 
[2026-01-09 05:39:32] 2026-01-09 10:39:15,873 | INFO     | architecture information:
[2026-01-09 05:39:32] 2026-01-09 10:39:15,874 | INFO     | executing command: cat /etc/os-release
[2026-01-09 05:39:32] 2026-01-09 10:39:15,889 | INFO     | cat /etc/os-release:
[2026-01-09 05:39:32] NAME="CentOS Linux"
[2026-01-09 05:39:32] VERSION="7 (Core)"
[2026-01-09 05:39:32] ID="centos"
[2026-01-09 05:39:32] ID_LIKE="rhel fedora"
[2026-01-09 05:39:32] VERSION_ID="7"
[2026-01-09 05:39:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 05:39:32] ANSI_COLOR="0;31"
[2026-01-09 05:39:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 05:39:32] HOME_URL="https://www.centos.org/"
[2026-01-09 05:39:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 05:39:32] 
[2026-01-09 05:39:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 05:39:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 05:39:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 05:39:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 05:39:32] 
[2026-01-09 05:39:32] 2026-01-09 10:39:15,890 | INFO     | ***************************************
[2026-01-09 05:39:32] 2026-01-09 10:39:16,393 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 05:39:32] 2026-01-09 10:39:16,411 | INFO     | sufficient remaining disk space (29446111232 B)
[2026-01-09 05:39:32] 2026-01-09 10:39:16,411 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 05:39:32] 2026-01-09 10:39:16,412 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 05:39:32] 2026-01-09 10:39:16,412 | INFO     | update_server=False
[2026-01-09 05:39:32] 2026-01-09 10:39:16,412 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 05:39:32] 2026-01-09 10:39:16,412 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:39:32] 2026-01-09 10:39:16,412 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 05:39:32] 2026-01-09 10:39:16,413 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 05:39:32] 2026-01-09 10:39:16,413 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 05:39:32] 2026-01-09 10:39:16,413 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 05:39:32] 2026-01-09 10:39:16,414 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 05:39:32] 2026-01-09 10:39:16,414 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 05:39:32] 2026-01-09 10:39:16,530 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 05:39:32] 2026-01-09 10:39:16,530 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 05:39:32] 2026-01-09 10:39:16,531 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:39:32] 2026-01-09 10:39:16,531 | INFO     | will abort loop
[2026-01-09 05:39:32] 2026-01-09 10:39:17,276 | INFO     | all data control threads have been joined
[2026-01-09 05:39:32] 2026-01-09 10:39:17,417 | INFO     | [job] retrieve thread has finished
[2026-01-09 05:39:32] 2026-01-09 10:39:17,418 | INFO     | [job] queue monitor thread has finished
[2026-01-09 05:39:32] 2026-01-09 10:39:17,536 | INFO     | [job] job monitor thread has finished
[2026-01-09 05:39:32] 2026-01-09 10:39:17,581 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 05:39:32] 2026-01-09 10:39:17,819 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 05:39:32] 2026-01-09 10:39:17,852 | INFO     | all payload control threads have been joined
[2026-01-09 05:39:32] 2026-01-09 10:39:17,867 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 05:39:32] 2026-01-09 10:39:17,989 | INFO     | [payload] failed_post thread has finished
[2026-01-09 05:39:32] 2026-01-09 10:39:18,049 | INFO     | all job control threads have been joined
[2026-01-09 05:39:32] 2026-01-09 10:39:18,182 | INFO     | [data] copytool_in thread has finished
[2026-01-09 05:39:32] 2026-01-09 10:39:18,278 | INFO     | [data] control thread has finished
[2026-01-09 05:39:32] 2026-01-09 10:39:18,417 | INFO     | [data] copytool_out thread has finished
[2026-01-09 05:39:32] 2026-01-09 10:39:18,542 | INFO     | [job] validate thread has finished
[2026-01-09 05:39:32] 2026-01-09 10:39:18,596 | INFO     | [payload] validate_post thread has finished
[2026-01-09 05:39:32] 2026-01-09 10:39:18,819 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 05:39:32] 2026-01-09 10:39:18,857 | INFO     | [payload] control thread has finished
[2026-01-09 05:39:32] 2026-01-09 10:39:19,054 | INFO     | [job] control thread has finished
[2026-01-09 05:39:32] 2026-01-09 10:39:20,420 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 05:39:32] 2026-01-09 10:39:26,098 | INFO     | [monitor] cgroup control has ended
[2026-01-09 05:39:32] 2026-01-09 10:39:27,481 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140044115048256)>', '<ExcThread(monitor, started 140043213584128)>']
[2026-01-09 05:39:32] 2026-01-09 10:39:28,476 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 05:39:32] 2026-01-09 10:39:28,476 | INFO     | [monitor] control thread has ended
[2026-01-09 05:39:32] 2026-01-09 10:39:32,499 | INFO     | all workflow threads have been joined
[2026-01-09 05:39:32] 2026-01-09 10:39:32,499 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 05:39:32] 2026-01-09 10:39:32,499 | INFO     | traces error code: 0
[2026-01-09 05:39:32] 2026-01-09 10:39:32,500 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 05:39:32] 2026-01-09 10:39:32,579 [wrapper] ==== pilot stdout END ====
[2026-01-09 05:39:32] 2026-01-09 10:39:32,583 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 05:39:32] 2026-01-09 10:39:32,587 [wrapper] pilotpid: 19921
[2026-01-09 05:39:32] 2026-01-09 10:39:32,590 [wrapper] Pilot exit status: 0
[2026-01-09 05:39:32] 2026-01-09 10:39:32,606 [wrapper] pandaids: 6963146406
[2026-01-09 05:39:32] 2026-01-09 10:39:32,644 [wrapper] cleanup supervisor_pilot 26077 19922
[2026-01-09 05:39:32] 2026-01-09 10:39:32,648 [wrapper] Test setup, not cleaning
[2026-01-09 05:39:32] 2026-01-09 10:39:32,652 [wrapper] apfmon messages muted
[2026-01-09 05:39:32] 2026-01-09 10:39:32,656 [wrapper] ==== wrapper stdout END ====
[2026-01-09 05:39:32] 2026-01-09 10:39:32,660 [wrapper] ==== wrapper stderr END ====
[2026-01-09 05:39:32]  *** Error codes and diagnostics ***
[2026-01-09 05:39:32]     "exeErrorCode": 0,
[2026-01-09 05:39:32]     "exeErrorDiag": "",
[2026-01-09 05:39:32]     "pilotErrorCode": 0,
[2026-01-09 05:39:32]     "pilotErrorDiag": "",
[2026-01-09 05:39:32]  *** Listing of results directory ***
[2026-01-09 05:39:32] total 434076
[2026-01-09 05:39:32] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 10:02 pilot3.tar.gz
[2026-01-09 05:39:32] -rwx------ 1 boincer umatlas     36322 Jan  8 10:05 runpilot2-wrapper.sh
[2026-01-09 05:39:32] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 10:07 queuedata.json
[2026-01-09 05:39:32] -rw-r--r-- 1 boincer umatlas       100 Jan  9 03:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 05:39:32] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 03:56 run_atlas
[2026-01-09 05:39:32] -rw-r--r-- 1 boincer umatlas       105 Jan  9 03:56 job.xml
[2026-01-09 05:39:32] -rw-r--r-- 2 boincer umatlas 222964271 Jan  9 03:56 EVNT.47898824._001056.pool.root.1
[2026-01-09 05:39:32] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 03:56 start_atlas.sh
[2026-01-09 05:39:32] drwxrwx--x 2 boincer umatlas      4096 Jan  9 03:56 shared
[2026-01-09 05:39:32] -rw-r--r-- 2 boincer umatlas    592402 Jan  9 03:56 input.tar.gz
[2026-01-09 05:39:32] -rw-r--r-- 1 boincer umatlas         0 Jan  9 03:56 boinc_lockfile
[2026-01-09 05:39:32] -rw-r--r-- 1 boincer umatlas      2519 Jan  9 03:56 pandaJob.out
[2026-01-09 05:39:32] -rw------- 1 boincer umatlas        57 Jan  9 03:56 setup.sh.local
[2026-01-09 05:39:32] -rw------- 1 boincer umatlas    989759 Jan  9 03:56 agis_schedconf.cvmfs.json
[2026-01-09 05:39:32] -rw------- 1 boincer umatlas   1516240 Jan  9 03:56 agis_ddmendpoints.agis.ALL.json
[2026-01-09 05:39:32] drwx------ 5 boincer umatlas      4096 Jan  9 03:56 pilot3
[2026-01-09 05:39:32] -rw-r--r-- 1 boincer umatlas      5952 Jan  9 05:28 init_data.xml
[2026-01-09 05:39:32] -rw------- 1 boincer umatlas 215032973 Jan  9 05:38 HITS.47898826._026786.pool.root.1
[2026-01-09 05:39:32] -rw------- 1 boincer umatlas        95 Jan  9 05:38 pilot_heartbeat.json
[2026-01-09 05:39:32] -rw------- 1 boincer umatlas      1045 Jan  9 05:39 memory_monitor_summary.json
[2026-01-09 05:39:32] -rw-r--r-- 1 boincer umatlas       529 Jan  9 05:39 boinc_task_state.xml
[2026-01-09 05:39:32] -rw------- 1 boincer umatlas    411259 Jan  9 05:39 log.47898826._026786.job.log.tgz.1
[2026-01-09 05:39:32] -rw------- 1 boincer umatlas      7841 Jan  9 05:39 heartbeat.json
[2026-01-09 05:39:32] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 05:39 boinc_mmap_file
[2026-01-09 05:39:32] -rw-r--r-- 1 boincer umatlas        27 Jan  9 05:39 wrapper_checkpoint.txt
[2026-01-09 05:39:32] -rw------- 1 boincer umatlas      4738 Jan  9 05:39 pilotlog.txt
[2026-01-09 05:39:32] -rw------- 1 boincer umatlas    879825 Jan  9 05:39 log.47898826._026786.job.log.1
[2026-01-09 05:39:32] -rw------- 1 boincer umatlas       357 Jan  9 05:39 output.list
[2026-01-09 05:39:32] -rw-r--r-- 1 boincer umatlas       620 Jan  9 05:39 runtime_log
[2026-01-09 05:39:32] -rw------- 1 boincer umatlas   1310720 Jan  9 05:39 result.tar.gz
[2026-01-09 05:39:32] -rw-r--r-- 1 boincer umatlas      9339 Jan  9 05:39 runtime_log.err
[2026-01-09 05:39:32] -rw------- 1 boincer umatlas       658 Jan  9 05:39 IH0NDmNl6x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmylkKDmDY866n.diag
[2026-01-09 05:39:32] -rw-r--r-- 1 boincer umatlas     21009 Jan  9 05:39 stderr.txt
[2026-01-09 05:39:32] HITS file was successfully produced:
[2026-01-09 05:39:32] -rw------- 1 boincer umatlas 215032973 Jan  9 05:38 shared/HITS.pool.root.1
[2026-01-09 05:39:32]  *** Contents of shared directory: ***
[2026-01-09 05:39:32] total 429616
[2026-01-09 05:39:32] -rw-r--r-- 2 boincer umatlas 222964271 Jan  9 03:56 ATLAS.root_0
[2026-01-09 05:39:32] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 03:56 start_atlas.sh
[2026-01-09 05:39:32] -rw-r--r-- 2 boincer umatlas    592402 Jan  9 03:56 input.tar.gz
[2026-01-09 05:39:32] -rw------- 1 boincer umatlas 215032973 Jan  9 05:38 HITS.pool.root.1
[2026-01-09 05:39:32] -rw------- 1 boincer umatlas   1310720 Jan  9 05:39 result.tar.gz
05:39:34 (15954): run_atlas exited; CPU time 64847.539564
05:39:34 (15954): called boinc_finish(0)

</stderr_txt>
]]>

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