Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:23:00 (2478178): wrapper (7.7.26015): starting
21:23:00 (2478178): wrapper: running run_atlas (--nthreads 6)
[2026-01-09 21:23:00] Arguments: --nthreads 6
[2026-01-09 21:23:00] Threads: 6
[2026-01-09 21:23:00] Checking for CVMFS
[2026-01-09 21:23:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 21:23:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 21:23:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 21:23:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 21:23:01] 2.13.3.0 2126625 425 55852 154942 2 188 46896477 52428800 1790 130560 0 1114007 99.997 13883 13 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-09 21:23:01] CVMFS is ok
[2026-01-09 21:23:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 21:23:01] Checking for apptainer binary...
[2026-01-09 21:23:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 21:23:01] Running /usr/bin/apptainer --version
[2026-01-09 21:23:01] apptainer version 1.4.4-1.el9
[2026-01-09 21:23:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 21:23:01] testio008
[2026-01-09 21:23:01] apptainer works
[2026-01-09 21:23:01] Set ATHENA_PROC_NUMBER=6
[2026-01-09 21:23:01] Set ATHENA_CORE_NUMBER=6
[2026-01-09 21:23:01] Starting ATLAS job with PandaID=6963156567
[2026-01-09 21:23:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 23:03:23]  *** The last 200 lines of the pilot log: ***
[2026-01-09 23:03:23] 2026-01-09 14:02:04,846 | INFO     | this job has now completed (state=finished)
[2026-01-09 23:03:23] 2026-01-09 14:02:04,846 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 23:03:23] 2026-01-09 14:02:04,846 | INFO     | log transfer has been attempted: DONE
[2026-01-09 23:03:23] 2026-01-09 14:02:04,846 | INFO     | job 6963156567 has finished - writing final server update
[2026-01-09 23:03:23] 2026-01-09 14:02:04,846 | INFO     | total number of processed events: 400 (read)
[2026-01-09 23:03:23] 2026-01-09 14:02:04,846 | INFO     | executing command: lscpu
[2026-01-09 23:03:23] 2026-01-09 14:02:04,857 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 23:03:23] 2026-01-09 14:02:05,182 | INFO     | time since job start (5937s) is within the limit (349056.0s)
[2026-01-09 23:03:23] 2026-01-09 14:02:06,643 | INFO     | monitor loop #441: job 0:6963156567 is in state 'finished'
[2026-01-09 23:03:23] 2026-01-09 14:02:06,643 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:03:23] 2026-01-09 14:02:07,187 | INFO     | time since job start (5939s) is within the limit (349056.0s)
[2026-01-09 23:03:23] 2026-01-09 14:02:09,146 | INFO     | monitor loop #442: job 0:6963156567 is in state 'finished'
[2026-01-09 23:03:23] 2026-01-09 14:02:09,146 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:03:23] 2026-01-09 14:02:09,192 | INFO     | time since job start (5941s) is within the limit (349056.0s)
[2026-01-09 23:03:23] 2026-01-09 14:02:11,198 | INFO     | time since job start (5943s) is within the limit (349056.0s)
[2026-01-09 23:03:23] 2026-01-09 14:02:11,649 | INFO     | monitor loop #443: job 0:6963156567 is in state 'finished'
[2026-01-09 23:03:23] 2026-01-09 14:02:11,650 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:03:23] 2026-01-09 14:02:12,268 | INFO     | PID=2481977 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 23:03:23] 2026-01-09 14:02:12,268 | INFO     | .. there are 3 such processes running
[2026-01-09 23:03:23] 2026-01-09 14:02:13,268 | INFO     | time since job start (5945s) is within the limit (349056.0s)
[2026-01-09 23:03:23] 2026-01-09 14:02:14,152 | INFO     | monitor loop #444: job 0:6963156567 is in state 'finished'
[2026-01-09 23:03:23] 2026-01-09 14:02:14,153 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:03:23] 2026-01-09 14:02:15,273 | INFO     | time since job start (5947s) is within the limit (349056.0s)
[2026-01-09 23:03:23] 2026-01-09 14:02:16,656 | INFO     | monitor loop #445: job 0:6963156567 is in state 'finished'
[2026-01-09 23:03:23] 2026-01-09 14:02:16,656 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:03:23] 2026-01-09 14:02:17,278 | INFO     | time since job start (5949s) is within the limit (349056.0s)
[2026-01-09 23:03:23] 2026-01-09 14:02:19,157 | INFO     | monitor loop #446: job 0:6963156567 is in state 'finished'
[2026-01-09 23:03:23] 2026-01-09 14:02:19,157 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:03:23] 2026-01-09 14:02:19,284 | INFO     | time since job start (5951s) is within the limit (349056.0s)
[2026-01-09 23:03:23] 2026-01-09 14:02:19,284 | INFO     | 5954s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-09 23:03:23] 2026-01-09 14:02:21,285 | INFO     | time since job start (5953s) is within the limit (349056.0s)
[2026-01-09 23:03:23] 2026-01-09 14:02:21,660 | INFO     | monitor loop #447: job 0:6963156567 is in state 'finished'
[2026-01-09 23:03:23] 2026-01-09 14:02:21,660 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:03:23] 2026-01-09 14:02:23,286 | INFO     | time since job start (5955s) is within the limit (349056.0s)
[2026-01-09 23:03:23] 2026-01-09 14:02:24,161 | INFO     | monitor loop #448: job 0:6963156567 is in state 'finished'
[2026-01-09 23:03:23] 2026-01-09 14:02:24,162 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:03:23] 2026-01-09 14:02:25,292 | INFO     | time since job start (5957s) is within the limit (349056.0s)
[2026-01-09 23:03:23] 2026-01-09 14:02:26,458 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 23:03:23] 2026-01-09 14:02:26,460 | INFO     | found 12 cores (12 cores per socket, 1 socket) , CPU MHz: 4278.859599999999
[2026-01-09 23:03:23] 2026-01-09 14:02:26,461 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6963156567/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 23:03:23] 2026-01-09 14:02:26,462 | INFO     | extracted standard info from prmon json
[2026-01-09 23:03:23] 2026-01-09 14:02:26,462 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 23:03:23] 2026-01-09 14:02:26,462 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 23:03:23] 2026-01-09 14:02:26,462 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 23:03:23] 2026-01-09 14:02:26,462 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 23:03:23] 2026-01-09 14:02:26,463 | INFO     | fitting pss+swap vs Time
[2026-01-09 23:03:23] 2026-01-09 14:02:26,463 | INFO     | sum of square deviations: 226022842.5
[2026-01-09 23:03:23] 2026-01-09 14:02:26,463 | INFO     | sum of deviations: -190418606.50000042
[2026-01-09 23:03:23] 2026-01-09 14:02:26,463 | INFO     | mean x: 1767964425.5
[2026-01-09 23:03:23] 2026-01-09 14:02:26,463 | INFO     | mean y: 2449784.855555556
[2026-01-09 23:03:23] 2026-01-09 14:02:26,463 | INFO     | intersect: 1491915710.1647809
[2026-01-09 23:03:23] 2026-01-09 14:02:26,463 | INFO     | chi2: 0.01657608795080703
[2026-01-09 23:03:23] 2026-01-09 14:02:26,464 | INFO     | current memory leak: -0.84 B/s (using 90 data points, chi2=0.02)
[2026-01-09 23:03:23] 2026-01-09 14:02:26,464 | INFO     | could have reported an average CPU frequency of 3941 MHz (7 samples)
[2026-01-09 23:03:23] 2026-01-09 14:02:26,464 | INFO     | ..............................
[2026-01-09 23:03:23] 2026-01-09 14:02:26,464 | INFO     | . Timing measurements:
[2026-01-09 23:03:23] 2026-01-09 14:02:26,464 | INFO     | . get job = 0 s
[2026-01-09 23:03:23] 2026-01-09 14:02:26,464 | INFO     | . initial setup = 3 s
[2026-01-09 23:03:23] 2026-01-09 14:02:26,464 | INFO     | . payload setup = 2 s
[2026-01-09 23:03:23] 2026-01-09 14:02:26,464 | INFO     | . stage-in = 0 s
[2026-01-09 23:03:23] 2026-01-09 14:02:26,464 | INFO     | . payload execution = 5911 s
[2026-01-09 23:03:23] 2026-01-09 14:02:26,464 | INFO     | . stage-out = 0 s
[2026-01-09 23:03:23] 2026-01-09 14:02:26,464 | INFO     | . log creation = 0 s
[2026-01-09 23:03:23] 2026-01-09 14:02:26,464 | INFO     | ..............................
[2026-01-09 23:03:23] 2026-01-09 14:02:26,500 | INFO     | 
[2026-01-09 23:03:23] 2026-01-09 14:02:26,500 | INFO     | job summary report
[2026-01-09 23:03:23] 2026-01-09 14:02:26,500 | INFO     | --------------------------------------------------
[2026-01-09 23:03:23] 2026-01-09 14:02:26,500 | INFO     | PanDA job id: 6963156567
[2026-01-09 23:03:23] 2026-01-09 14:02:26,500 | INFO     | task id: 47898826
[2026-01-09 23:03:23] 2026-01-09 14:02:26,500 | INFO     | errors: (none)
[2026-01-09 23:03:23] 2026-01-09 14:02:26,500 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 23:03:23] 2026-01-09 14:02:26,500 | INFO     | pilot state: finished 
[2026-01-09 23:03:23] 2026-01-09 14:02:26,501 | INFO     | transexitcode: 0
[2026-01-09 23:03:23] 2026-01-09 14:02:26,501 | INFO     | exeerrorcode: 0
[2026-01-09 23:03:23] 2026-01-09 14:02:26,501 | INFO     | exeerrordiag: 
[2026-01-09 23:03:23] 2026-01-09 14:02:26,501 | INFO     | exitcode: 0
[2026-01-09 23:03:23] 2026-01-09 14:02:26,501 | INFO     | exitmsg: OK
[2026-01-09 23:03:23] 2026-01-09 14:02:26,501 | INFO     | cpuconsumptiontime: 32765 s
[2026-01-09 23:03:23] 2026-01-09 14:02:26,501 | INFO     | nevents: 400
[2026-01-09 23:03:23] 2026-01-09 14:02:26,501 | INFO     | neventsw: 0
[2026-01-09 23:03:23] 2026-01-09 14:02:26,501 | INFO     | pid: 2488713
[2026-01-09 23:03:23] 2026-01-09 14:02:26,501 | INFO     | pgrp: 2488713
[2026-01-09 23:03:23] 2026-01-09 14:02:26,501 | INFO     | corecount: 6
[2026-01-09 23:03:23] 2026-01-09 14:02:26,501 | INFO     | event service: False
[2026-01-09 23:03:23] 2026-01-09 14:02:26,501 | INFO     | sizes: {0: 2283970, 2: 2284232, 11: 2284260, 5917: 2311039, 5918: 2320037, 5921: 2320093, 5945: 2320415}
[2026-01-09 23:03:23] 2026-01-09 14:02:26,501 | INFO     | --------------------------------------------------
[2026-01-09 23:03:23] 2026-01-09 14:02:26,501 | INFO     | 
[2026-01-09 23:03:23] 2026-01-09 14:02:26,501 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-09 23:03:23] 2026-01-09 14:02:26,509 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 23:03:23] 2026-01-09 14:02:26,509 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 23:03:23] 2026-01-09 14:02:26,509 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 23:03:23] 2026-01-09 14:02:26,509 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 23:03:23] 2026-01-09 14:02:26,509 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 23:03:23] 2026-01-09 14:02:26,509 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 23:03:23] 2026-01-09 14:02:26,509 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 23:03:23] 2026-01-09 14:02:26,509 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 23:03:23] 2026-01-09 14:02:26,509 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 23:03:23] 2026-01-09 14:02:26,509 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 23:03:23] 2026-01-09 14:02:26,509 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 23:03:23] 2026-01-09 14:02:26,509 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 23:03:23] 2026-01-09 14:02:26,509 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 23:03:23] 2026-01-09 14:02:26,509 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 23:03:23] 2026-01-09 14:02:26,510 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 23:03:23] 2026-01-09 14:02:26,510 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 23:03:23] 2026-01-09 14:02:26,510 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 23:03:23] 2026-01-09 14:02:26,510 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 23:03:23] 2026-01-09 14:02:26,510 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 23:03:23] 2026-01-09 14:02:26,510 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 23:03:23] 2026-01-09 14:02:26,510 | INFO     | job 6963156567 has completed (purged errors)
[2026-01-09 23:03:23] 2026-01-09 14:02:26,510 | INFO     | overall cleanup function is called
[2026-01-09 23:03:23] 2026-01-09 14:02:27,514 | INFO     | --- collectZombieJob: --- 10, [2488713]
[2026-01-09 23:03:23] 2026-01-09 14:02:27,515 | INFO     | zombie collector waiting for pid 2488713
[2026-01-09 23:03:23] 2026-01-09 14:02:27,515 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 23:03:23] 2026-01-09 14:02:27,515 | INFO     | collected zombie processes
[2026-01-09 23:03:23] 2026-01-09 14:02:27,515 | INFO     | will attempt to kill all subprocesses of pid=2488713
[2026-01-09 23:03:23] 2026-01-09 14:02:27,568 | INFO     | process IDs to be killed: [2488713] (in reverse order)
[2026-01-09 23:03:23] 2026-01-09 14:02:27,593 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 23:03:23] 2026-01-09 14:02:27,593 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 23:03:23] 2026-01-09 14:02:27,595 | INFO     | did not find any defunct processes belonging to 2488713
[2026-01-09 23:03:23] 2026-01-09 14:02:27,597 | INFO     | did not find any defunct processes belonging to 2488713
[2026-01-09 23:03:23] 2026-01-09 14:02:27,597 | INFO     | ready for new job
[2026-01-09 23:03:23] 2026-01-09 14:02:27,597 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 23:03:23] 2026-01-09 14:02:27,598 | INFO     | ***************************************
[2026-01-09 23:03:23] 2026-01-09 14:02:27,598 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 23:03:23] 2026-01-09 14:02:27,598 | INFO     | ***************************************
[2026-01-09 23:03:23] 2026-01-09 14:02:27,598 | INFO     | 
[2026-01-09 23:03:23] 2026-01-09 14:02:27,599 | INFO     | architecture information:
[2026-01-09 23:03:23] 2026-01-09 14:02:27,599 | INFO     | executing command: cat /etc/os-release
[2026-01-09 23:03:23] 2026-01-09 14:02:27,604 | INFO     | cat /etc/os-release:
[2026-01-09 23:03:23] NAME="CentOS Linux"
[2026-01-09 23:03:23] VERSION="7 (Core)"
[2026-01-09 23:03:23] ID="centos"
[2026-01-09 23:03:23] ID_LIKE="rhel fedora"
[2026-01-09 23:03:23] VERSION_ID="7"
[2026-01-09 23:03:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 23:03:23] ANSI_COLOR="0;31"
[2026-01-09 23:03:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 23:03:23] HOME_URL="https://www.centos.org/"
[2026-01-09 23:03:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 23:03:23] 
[2026-01-09 23:03:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 23:03:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 23:03:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 23:03:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 23:03:23] 
[2026-01-09 23:03:23] 2026-01-09 14:02:27,605 | INFO     | ***************************************
[2026-01-09 23:03:23] 2026-01-09 14:02:28,106 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-09 23:03:23] 2026-01-09 14:02:28,114 | INFO     | sufficient remaining disk space (278733520896 B)
[2026-01-09 23:03:23] 2026-01-09 14:02:28,114 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 23:03:23] 2026-01-09 14:02:28,114 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 23:03:23] 2026-01-09 14:02:28,114 | INFO     | update_server=False
[2026-01-09 23:03:23] 2026-01-09 14:02:28,114 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 23:03:23] 2026-01-09 14:02:28,115 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:03:23] 2026-01-09 14:02:28,115 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:03:23] 2026-01-09 14:02:28,115 | INFO     | aborting loop
[2026-01-09 23:03:23] 2026-01-09 14:02:28,750 | INFO     | all job control threads have been joined
[2026-01-09 23:03:23] 2026-01-09 14:02:29,119 | INFO     | [job] job monitor thread has finished
[2026-01-09 23:03:23] 2026-01-09 14:02:29,120 | INFO     | [job] retrieve thread has finished
[2026-01-09 23:03:23] 2026-01-09 14:02:29,120 | INFO     | [job] queue monitor thread has finished
[2026-01-09 23:03:23] 2026-01-09 14:02:29,123 | INFO     | all data control threads have been joined
[2026-01-09 23:03:23] 2026-01-09 14:02:29,218 | INFO     | all payload control threads have been joined
[2026-01-09 23:03:23] 2026-01-09 14:02:29,240 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 23:03:23] 2026-01-09 14:02:29,519 | INFO     | [job] validate thread has finished
[2026-01-09 23:03:23] 2026-01-09 14:02:29,536 | INFO     | [payload] validate_post thread has finished
[2026-01-09 23:03:23] 2026-01-09 14:02:29,715 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 23:03:23] 2026-01-09 14:02:29,756 | INFO     | [job] control thread has finished
[2026-01-09 23:03:23] 2026-01-09 14:02:29,758 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 23:03:23] 2026-01-09 14:02:30,128 | INFO     | [data] control thread has finished
[2026-01-09 23:03:23] 2026-01-09 14:02:30,223 | INFO     | [payload] control thread has finished
[2026-01-09 23:03:23] 2026-01-09 14:02:30,430 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 23:03:23] 2026-01-09 14:02:30,560 | INFO     | [data] copytool_in thread has finished
[2026-01-09 23:03:23] 2026-01-09 14:02:30,595 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 23:03:23] 2026-01-09 14:02:30,716 | INFO     | [payload] failed_post thread has finished
[2026-01-09 23:03:23] 2026-01-09 14:02:31,246 | INFO     | [data] copytool_out thread has finished
[2026-01-09 23:03:23] 2026-01-09 14:02:34,436 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 23:03:23] 2026-01-09 14:02:38,574 | INFO     | job.realtimelogging is not enabled
[2026-01-09 23:03:23] 2026-01-09 14:02:39,579 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 23:03:23] 2026-01-09 14:02:58,423 | INFO     | PID=2481977 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 23:03:23] 2026-01-09 14:02:58,424 | INFO     | .. there are 3 such processes running
[2026-01-09 23:03:23] 2026-01-09 14:02:58,424 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 23:03:23] 2026-01-09 14:02:58,424 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 23:03:23] 2026-01-09 14:02:58,424 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 23:03:23] 2026-01-09 14:03:17,842 | INFO     | [monitor] cgroup control has ended
[2026-01-09 23:03:23] 2026-01-09 14:03:18,847 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139796849092416)>', '<ExcThread(monitor, started 139796567525120)>']
[2026-01-09 23:03:23] 2026-01-09 14:03:19,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 23:03:23] 2026-01-09 14:03:19,516 | INFO     | [monitor] control thread has ended
[2026-01-09 23:03:23] 2026-01-09 14:03:23,872 | INFO     | all workflow threads have been joined
[2026-01-09 23:03:23] 2026-01-09 14:03:23,872 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 23:03:23] 2026-01-09 14:03:23,872 | INFO     | traces error code: 0
[2026-01-09 23:03:23] 2026-01-09 14:03:23,872 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 23:03:23] 2026-01-09 14:03:23,922 [wrapper] ==== pilot stdout END ====
[2026-01-09 23:03:23] 2026-01-09 14:03:23,923 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 23:03:23] 2026-01-09 14:03:23,924 [wrapper] pilotpid: 2481977
[2026-01-09 23:03:23] 2026-01-09 14:03:23,924 [wrapper] Pilot exit status: 0
[2026-01-09 23:03:23] 2026-01-09 14:03:23,928 [wrapper] pandaids: 6963156567
[2026-01-09 23:03:23] 2026-01-09 14:03:23,939 [wrapper] cleanup supervisor_pilot 2529940 2481978
[2026-01-09 23:03:23] 2026-01-09 14:03:23,940 [wrapper] Test setup, not cleaning
[2026-01-09 23:03:23] 2026-01-09 14:03:23,941 [wrapper] apfmon messages muted
[2026-01-09 23:03:23] 2026-01-09 14:03:23,942 [wrapper] ==== wrapper stdout END ====
[2026-01-09 23:03:23] 2026-01-09 14:03:23,943 [wrapper] ==== wrapper stderr END ====
[2026-01-09 23:03:23]  *** Error codes and diagnostics ***
[2026-01-09 23:03:23]     "exeErrorCode": 0,
[2026-01-09 23:03:23]     "exeErrorDiag": "",
[2026-01-09 23:03:23]     "pilotErrorCode": 0,
[2026-01-09 23:03:23]     "pilotErrorDiag": "",
[2026-01-09 23:03:23]  *** Listing of results directory ***
[2026-01-09 23:03:23] total 440436
[2026-01-09 23:03:23] -rw-r--r--. 1 boinc boinc    579449 Jan  9 04:06 pilot3.tar.gz
[2026-01-09 23:03:23] -rwx------. 1 boinc boinc     36322 Jan  9 04:10 runpilot2-wrapper.sh
[2026-01-09 23:03:23] -rw-r--r--. 1 boinc boinc      5112 Jan  9 04:11 queuedata.json
[2026-01-09 23:03:23] -rw-r--r--. 1 boinc boinc       100 Jan  9 21:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 23:03:23] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 21:23 run_atlas
[2026-01-09 23:03:23] -rw-r--r--. 1 boinc boinc       105 Jan  9 21:23 job.xml
[2026-01-09 23:03:23] -rw-r--r--. 1 boinc boinc      9525 Jan  9 21:23 init_data.xml
[2026-01-09 23:03:23] -rw-r--r--. 2 boinc boinc 224747307 Jan  9 21:23 EVNT.47898824._001205.pool.root.1
[2026-01-09 23:03:23] -rw-r--r--. 2 boinc boinc     15847 Jan  9 21:23 start_atlas.sh
[2026-01-09 23:03:23] drwxrwx--x. 2 boinc boinc        68 Jan  9 21:23 shared
[2026-01-09 23:03:23] -rw-r--r--. 2 boinc boinc    592400 Jan  9 21:23 input.tar.gz
[2026-01-09 23:03:23] -rw-r--r--. 1 boinc boinc         0 Jan  9 21:23 boinc_lockfile
[2026-01-09 23:03:23] -rw-r--r--. 1 boinc boinc      2519 Jan  9 21:23 pandaJob.out
[2026-01-09 23:03:23] -rw-------. 1 boinc boinc    989377 Jan  9 21:23 agis_schedconf.cvmfs.json
[2026-01-09 23:03:23] -rw-------. 1 boinc boinc   1516240 Jan  9 21:23 agis_ddmendpoints.agis.ALL.json
[2026-01-09 23:03:23] drwx------. 5 boinc boinc      4096 Jan  9 21:23 pilot3
[2026-01-09 23:03:23] -rw-r--r--. 1 boinc boinc       529 Jan  9 23:01 boinc_task_state.xml
[2026-01-09 23:03:23] -rw-------. 1 boinc boinc 219994160 Jan  9 23:01 HITS.47898826._031737.pool.root.1
[2026-01-09 23:03:23] -rw-------. 1 boinc boinc      1016 Jan  9 23:01 memory_monitor_summary.json
[2026-01-09 23:03:23] -rw-------. 1 boinc boinc    314242 Jan  9 23:01 log.47898826._031737.job.log.tgz.1
[2026-01-09 23:03:23] -rw-------. 1 boinc boinc        95 Jan  9 23:02 pilot_heartbeat.json
[2026-01-09 23:03:23] -rw-------. 1 boinc boinc      7754 Jan  9 23:02 heartbeat.json
[2026-01-09 23:03:23] -rw-r--r--. 1 boinc boinc        27 Jan  9 23:03 wrapper_checkpoint.txt
[2026-01-09 23:03:23] -rw-r--r--. 1 boinc boinc      8192 Jan  9 23:03 boinc_mmap_file
[2026-01-09 23:03:23] -rw-------. 1 boinc boinc      4896 Jan  9 23:03 pilotlog.txt
[2026-01-09 23:03:23] -rw-------. 1 boinc boinc    869808 Jan  9 23:03 log.47898826._031737.job.log.1
[2026-01-09 23:03:23] -rw-------. 1 boinc boinc       357 Jan  9 23:03 output.list
[2026-01-09 23:03:23] -rw-r--r--. 1 boinc boinc       620 Jan  9 23:03 runtime_log
[2026-01-09 23:03:23] -rw-------. 1 boinc boinc   1198080 Jan  9 23:03 result.tar.gz
[2026-01-09 23:03:23] -rw-r--r--. 1 boinc boinc      8775 Jan  9 23:03 runtime_log.err
[2026-01-09 23:03:23] -rw-------. 1 boinc boinc       642 Jan  9 23:03 AOfMDmyZAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSAgKDmiDu8Om.diag
[2026-01-09 23:03:23] -rw-r--r--. 1 boinc boinc     22005 Jan  9 23:03 stderr.txt
[2026-01-09 23:03:23] HITS file was successfully produced:
[2026-01-09 23:03:23] -rw-------. 1 boinc boinc 219994160 Jan  9 23:01 shared/HITS.pool.root.1
[2026-01-09 23:03:23]  *** Contents of shared directory: ***
[2026-01-09 23:03:23] total 436088
[2026-01-09 23:03:23] -rw-r--r--. 2 boinc boinc 224747307 Jan  9 21:23 ATLAS.root_0
[2026-01-09 23:03:23] -rw-r--r--. 2 boinc boinc     15847 Jan  9 21:23 start_atlas.sh
[2026-01-09 23:03:23] -rw-r--r--. 2 boinc boinc    592400 Jan  9 21:23 input.tar.gz
[2026-01-09 23:03:23] -rw-------. 1 boinc boinc 219994160 Jan  9 23:01 HITS.pool.root.1
[2026-01-09 23:03:23] -rw-------. 1 boinc boinc   1198080 Jan  9 23:03 result.tar.gz
23:03:25 (2478178): run_atlas exited; CPU time 32811.048696
23:03:25 (2478178): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN