Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:36:19 (410192): wrapper (7.7.26015): starting
12:36:19 (410192): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 12:36:19] Arguments: --nthreads 4
[2026-01-09 12:36:19] Threads: 4
[2026-01-09 12:36:19] Checking for CVMFS
[2026-01-09 12:36:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 12:36:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 12:36:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 12:36:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 12:36:19] 2.9.2.0 3067 1322 85328 154942 0 57 21011089 36864000 0 130560 0 1045653 99.992 46706 3033 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 12:36:19] CVMFS is ok
[2026-01-09 12:36:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 12:36:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 12:36:19] Further information can be found at the LHC@home message board.
[2026-01-09 12:36:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 12:36:19] Checking for apptainer binary...
[2026-01-09 12:36:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 12:36:19] Running /usr/bin/apptainer --version
[2026-01-09 12:36:19] apptainer version 1.4.1-1.1
[2026-01-09 12:36:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 12:36:19] thA383a
[2026-01-09 12:36:19] apptainer works
[2026-01-09 12:36:19] Set ATHENA_PROC_NUMBER=4
[2026-01-09 12:36:19] Set ATHENA_CORE_NUMBER=4
[2026-01-09 12:36:19] Starting ATLAS job with PandaID=6963156382
[2026-01-09 12:36:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:21:40]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:21:40] 2026-01-09 13:20:40,162 | INFO     | update_server=False
[2026-01-09 14:21:40] 2026-01-09 13:20:40,162 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:21:40] 2026-01-09 13:20:40,163 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:21:40] 2026-01-09 13:20:40,190 | INFO     | all data control threads have been joined
[2026-01-09 14:21:40] 2026-01-09 13:20:40,306 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:21:40] 2026-01-09 13:20:40,307 | INFO     | aborting loop
[2026-01-09 14:21:40] 2026-01-09 13:20:40,539 | INFO     | all job control threads have been joined
[2026-01-09 14:21:40] 2026-01-09 13:20:41,035 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:21:40] 2026-01-09 13:20:41,163 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:21:40] 2026-01-09 13:20:41,168 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:21:40] 2026-01-09 13:20:41,196 | INFO     | [data] control thread has finished
[2026-01-09 14:21:40] 2026-01-09 13:20:41,286 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:21:40] 2026-01-09 13:20:41,312 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:21:40] 2026-01-09 13:20:41,343 | INFO     | [job] validate thread has finished
[2026-01-09 14:21:40] 2026-01-09 13:20:41,545 | INFO     | [job] control thread has finished
[2026-01-09 14:21:40] 2026-01-09 13:20:41,615 | INFO     | all payload control threads have been joined
[2026-01-09 14:21:40] 2026-01-09 13:20:41,651 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:21:40] 2026-01-09 13:20:41,837 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:21:40] 2026-01-09 13:20:41,961 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:21:40] 2026-01-09 13:20:42,040 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:21:40] 2026-01-09 13:20:42,468 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:21:40] 2026-01-09 13:20:42,569 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:21:40] 2026-01-09 13:20:42,599 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:21:40] 2026-01-09 13:20:42,619 | INFO     | [payload] control thread has finished
[2026-01-09 14:21:40] 2026-01-09 13:20:43,041 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:21:40] 2026-01-09 13:20:45,292 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:21:40] 2026-01-09 13:21:10,064 | INFO     | PID=414000 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 14:21:40] 2026-01-09 13:21:10,065 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:21:40] 2026-01-09 13:21:10,065 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:21:40] 2026-01-09 13:21:10,065 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:21:40] 2026-01-09 13:21:25,866 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-01-09 14:21:40] 2026-01-09 13:21:35,328 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:21:40] 2026-01-09 13:21:35,570 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140554705073984)>', '<ExcThread(monitor, started 140553408739072)>']
[2026-01-09 14:21:40] 2026-01-09 13:21:36,203 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:21:40] 2026-01-09 13:21:36,203 | INFO     | [monitor] control thread has ended
[2026-01-09 14:21:40] 2026-01-09 13:21:40,571 | INFO     | all workflow threads have been joined
[2026-01-09 14:21:40] 2026-01-09 13:21:40,571 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:21:40] 2026-01-09 13:21:40,571 | INFO     | traces error code: 0
[2026-01-09 14:21:40] 2026-01-09 13:21:40,572 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:21:40] 2026-01-09 13:21:40,651 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:21:40] 2026-01-09 13:21:40,655 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:21:40] 2026-01-09 13:21:40,659 [wrapper] pilotpid: 414000
[2026-01-09 14:21:40] 2026-01-09 13:21:40,663 [wrapper] Pilot exit status: 0
[2026-01-09 14:21:40] 2026-01-09 13:21:40,676 [wrapper] pandaids: 6963156382
[2026-01-09 14:21:40] 2026-01-09 13:21:40,699 [wrapper] cleanup supervisor_pilot  438950 414001
[2026-01-09 14:21:40] 2026-01-09 13:21:40,702 [wrapper] Test setup, not cleaning
[2026-01-09 14:21:40] 2026-01-09 13:21:40,706 [wrapper] apfmon messages muted
[2026-01-09 14:21:40] 2026-01-09 13:21:40,710 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:21:40] 2026-01-09 13:21:40,714 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:21:40]  *** Error codes and diagnostics ***
[2026-01-09 14:21:40]     "exeErrorCode": 0,
[2026-01-09 14:21:40]     "exeErrorDiag": "",
[2026-01-09 14:21:40]     "pilotErrorCode": 0,
[2026-01-09 14:21:40]     "pilotErrorDiag": "",
[2026-01-09 14:21:40]  *** Listing of results directory ***
[2026-01-09 14:21:40] total 440044
[2026-01-09 14:21:40] -rw-r--r-- 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 14:21:40] -rwx------ 1 boinc boinc     36322 Jan  8 20:10 runpilot2-wrapper.sh
[2026-01-09 14:21:40] -rw-r--r-- 1 boinc boinc      5112 Jan  8 20:11 queuedata.json
[2026-01-09 14:21:40] -rw-r--r-- 1 boinc boinc       100 Jan  9 12:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:21:40] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 12:36 run_atlas
[2026-01-09 14:21:40] -rw-r--r-- 1 boinc boinc       105 Jan  9 12:36 job.xml
[2026-01-09 14:21:40] -rw-r--r-- 2 boinc boinc 225353432 Jan  9 12:36 EVNT.47898824._000902.pool.root.1
[2026-01-09 14:21:40] -rw-r--r-- 2 boinc boinc    592399 Jan  9 12:36 input.tar.gz
[2026-01-09 14:21:40] -rw-r--r-- 2 boinc boinc     15847 Jan  9 12:36 start_atlas.sh
[2026-01-09 14:21:40] drwxrwx--x 2 boinc boinc      4096 Jan  9 12:36 shared
[2026-01-09 14:21:40] -rw-r--r-- 1 boinc boinc         0 Jan  9 12:36 boinc_setup_complete
[2026-01-09 14:21:40] -rw-r--r-- 1 boinc boinc      6377 Jan  9 12:36 init_data.xml
[2026-01-09 14:21:40] -rw-r--r-- 1 boinc boinc         0 Jan  9 12:36 boinc_lockfile
[2026-01-09 14:21:40] -rw-r--r-- 1 boinc boinc      2518 Jan  9 12:36 pandaJob.out
[2026-01-09 14:21:40] -rw------- 1 boinc boinc    989377 Jan  9 12:36 agis_schedconf.cvmfs.json
[2026-01-09 14:21:40] -rw------- 1 boinc boinc   1516240 Jan  9 12:36 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:21:40] drwx------ 5 boinc boinc      4096 Jan  9 12:36 pilot3
[2026-01-09 14:21:40] -rw------- 1 boinc boinc 218992659 Jan  9 14:20 HITS.47898826._031552.pool.root.1
[2026-01-09 14:21:40] -rw-r--r-- 1 boinc boinc       530 Jan  9 14:20 boinc_task_state.xml
[2026-01-09 14:21:40] -rw------- 1 boinc boinc      1021 Jan  9 14:20 memory_monitor_summary.json
[2026-01-09 14:21:40] -rw------- 1 boinc boinc    277461 Jan  9 14:20 log.47898826._031552.job.log.tgz.1
[2026-01-09 14:21:40] -rw------- 1 boinc boinc      7770 Jan  9 14:20 heartbeat.json
[2026-01-09 14:21:40] -rw------- 1 boinc boinc        95 Jan  9 14:21 pilot_heartbeat.json
[2026-01-09 14:21:40] -rw-r--r-- 1 boinc boinc        27 Jan  9 14:21 wrapper_checkpoint.txt
[2026-01-09 14:21:40] -rw-r--r-- 1 boinc boinc      8192 Jan  9 14:21 boinc_mmap_file
[2026-01-09 14:21:40] -rw------- 1 boinc boinc      4751 Jan  9 14:21 pilotlog.txt
[2026-01-09 14:21:40] -rw------- 1 boinc boinc    904352 Jan  9 14:21 log.47898826._031552.job.log.1
[2026-01-09 14:21:40] -rw------- 1 boinc boinc       357 Jan  9 14:21 output.list
[2026-01-09 14:21:40] -rw-r--r-- 1 boinc boinc       620 Jan  9 14:21 runtime_log
[2026-01-09 14:21:40] -rw------- 1 boinc boinc   1198080 Jan  9 14:21 result.tar.gz
[2026-01-09 14:21:40] -rw-r--r-- 1 boinc boinc      8902 Jan  9 14:21 runtime_log.err
[2026-01-09 14:21:40] -rw------- 1 boinc boinc       660 Jan  9 14:21 n1bNDmmZAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmC9fKDmrTnSVm.diag
[2026-01-09 14:21:40] -rw-r--r-- 1 boinc boinc      7508 Jan  9 14:21 stderr.txt
[2026-01-09 14:21:40] HITS file was successfully produced:
[2026-01-09 14:21:40] -rw------- 1 boinc boinc 218992659 Jan  9 14:20 shared/HITS.pool.root.1
[2026-01-09 14:21:40]  *** Contents of shared directory: ***
[2026-01-09 14:21:40] total 435712
[2026-01-09 14:21:40] -rw-r--r-- 2 boinc boinc 225353432 Jan  9 12:36 ATLAS.root_0
[2026-01-09 14:21:40] -rw-r--r-- 2 boinc boinc    592399 Jan  9 12:36 input.tar.gz
[2026-01-09 14:21:40] -rw-r--r-- 2 boinc boinc     15847 Jan  9 12:36 start_atlas.sh
[2026-01-09 14:21:40] -rw------- 1 boinc boinc 218992659 Jan  9 14:20 HITS.pool.root.1
[2026-01-09 14:21:40] -rw------- 1 boinc boinc   1198080 Jan  9 14:21 result.tar.gz
14:21:42 (410192): run_atlas exited; CPU time 23777.123369
14:21:42 (410192): called boinc_finish(0)

</stderr_txt>
]]>

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