Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:07:44 (1236456): wrapper (7.7.26015): starting
14:07:44 (1236456): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 14:07:44] Arguments: --nthreads 12
[2026-01-09 14:07:44] Threads: 12
[2026-01-09 14:07:44] Checking for CVMFS
[2026-01-09 14:07:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:07:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:07:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:07:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:07:45] 2.12.7.0 3936030 2682 78764 154944 1 57 2670053 4097025 923 130560 0 3579053 99.971 268181 21599 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-01-09 14:07:45] CVMFS is ok
[2026-01-09 14:07:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:07:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:07:45] Further information can be found at the LHC@home message board.
[2026-01-09 14:07:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:07:45] Checking for apptainer binary...
[2026-01-09 14:07:45] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2026-01-09 14:07:45] apptainer is not installed, using version from CVMFS
[2026-01-09 14:07:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:07:45] pckelar4.cern.ch
[2026-01-09 14:07:45] apptainer works
[2026-01-09 14:07:45] Set ATHENA_PROC_NUMBER=12
[2026-01-09 14:07:45] Set ATHENA_CORE_NUMBER=12
[2026-01-09 14:07:45] Starting ATLAS job with PandaID=6963156375
[2026-01-09 14:07:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:44:35]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:44:35] 2026-01-09 15:44:02,098 | INFO     | time since job start (9367s) is within the limit (349056.0s)
[2026-01-09 16:44:35] 2026-01-09 15:44:03,026 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 16:44:35] 2026-01-09 15:44:03,032 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2833.4624999999996
[2026-01-09 16:44:35] 2026-01-09 15:44:03,037 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6963156375/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:44:35] 2026-01-09 15:44:03,038 | INFO     | extracted standard info from prmon json
[2026-01-09 16:44:35] 2026-01-09 15:44:03,038 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 16:44:35] 2026-01-09 15:44:03,038 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 16:44:35] 2026-01-09 15:44:03,038 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 16:44:35] 2026-01-09 15:44:03,039 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 16:44:35] 2026-01-09 15:44:03,044 | INFO     | fitting pss+swap vs Time
[2026-01-09 16:44:35] 2026-01-09 15:44:03,044 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 16:44:35] 2026-01-09 15:44:03,045 | INFO     | sum of deviations: 24477288708.0
[2026-01-09 16:44:35] 2026-01-09 15:44:03,045 | INFO     | mean x: 1767968741.0
[2026-01-09 16:44:35] 2026-01-09 15:44:03,045 | INFO     | mean y: 2704980.4640522874
[2026-01-09 16:44:35] 2026-01-09 15:44:03,045 | INFO     | intersect: -38964901326.98796
[2026-01-09 16:44:35] 2026-01-09 15:44:03,045 | INFO     | chi2: 1.3787693798188283
[2026-01-09 16:44:35] 2026-01-09 15:44:03,046 | INFO     | sum of square deviations: 1005179777.0
[2026-01-09 16:44:35] 2026-01-09 15:44:03,046 | INFO     | sum of deviations: 23830363882.999996
[2026-01-09 16:44:35] 2026-01-09 15:44:03,047 | INFO     | mean x: 1767968588.5
[2026-01-09 16:44:35] 2026-01-09 15:44:03,047 | INFO     | mean y: 2704043.743243243
[2026-01-09 16:44:35] 2026-01-09 15:44:03,047 | INFO     | intersect: -41911524397.47308
[2026-01-09 16:44:35] 2026-01-09 15:44:03,047 | INFO     | chi2: 1.3791968595574797
[2026-01-09 16:44:35] 2026-01-09 15:44:03,047 | INFO     | current chi2=1.3791968595574797 (change=-0.031004440982551954 %)
[2026-01-09 16:44:35] 2026-01-09 15:44:03,047 | INFO     | right removable region: 147
[2026-01-09 16:44:35] 2026-01-09 15:44:03,047 | INFO     | sum of square deviations: 1005179777.0
[2026-01-09 16:44:35] 2026-01-09 15:44:03,048 | INFO     | sum of deviations: 4302360835.500001
[2026-01-09 16:44:35] 2026-01-09 15:44:03,048 | INFO     | mean x: 1767968893.5
[2026-01-09 16:44:35] 2026-01-09 15:44:03,048 | INFO     | mean y: 2733668.5337837837
[2026-01-09 16:44:35] 2026-01-09 15:44:03,048 | INFO     | intersect: -7564509823.449713
[2026-01-09 16:44:35] 2026-01-09 15:44:03,049 | INFO     | chi2: 0.2021313255143234
[2026-01-09 16:44:35] 2026-01-09 15:44:03,049 | INFO     | current chi2=0.2021313255143234 (change=85.33972914738767 %)
[2026-01-09 16:44:35] 2026-01-09 15:44:03,049 | INFO     | sum of square deviations: 906703512.0
[2026-01-09 16:44:35] 2026-01-09 15:44:03,049 | INFO     | sum of deviations: -6501068290.0
[2026-01-09 16:44:35] 2026-01-09 15:44:03,050 | INFO     | mean x: 1767969046.0
[2026-01-09 16:44:35] 2026-01-09 15:44:03,050 | INFO     | mean y: 2750300.846153846
[2026-01-09 16:44:35] 2026-01-09 15:44:03,050 | INFO     | intersect: 12679096372.672277
[2026-01-09 16:44:35] 2026-01-09 15:44:03,050 | INFO     | chi2: 0.007876723544860107
[2026-01-09 16:44:35] 2026-01-09 15:44:03,050 | INFO     | current chi2=0.007876723544860107 (change=96.10316534321547 %)
[2026-01-09 16:44:35] 2026-01-09 15:44:03,050 | INFO     | sum of square deviations: 814878534.5
[2026-01-09 16:44:35] 2026-01-09 15:44:03,051 | INFO     | sum of deviations: -6735984169.999998
[2026-01-09 16:44:35] 2026-01-09 15:44:03,051 | INFO     | mean x: 1767969198.5
[2026-01-09 16:44:35] 2026-01-09 15:44:03,051 | INFO     | mean y: 2750677.202898551
[2026-01-09 16:44:35] 2026-01-09 15:44:03,051 | INFO     | intersect: 14617214097.141695
[2026-01-09 16:44:35] 2026-01-09 15:44:03,051 | INFO     | chi2: 0.006377165164584923
[2026-01-09 16:44:35] 2026-01-09 15:44:03,052 | INFO     | current chi2=0.006377165164584923 (change=19.037844501394353 %)
[2026-01-09 16:44:35] 2026-01-09 15:44:03,052 | INFO     | left removable region: 30
[2026-01-09 16:44:35] 2026-01-09 15:44:03,052 | INFO     | sum of square deviations: 496597218.0
[2026-01-09 16:44:35] 2026-01-09 15:44:03,052 | INFO     | sum of deviations: -3419543856.0
[2026-01-09 16:44:35] 2026-01-09 15:44:03,052 | INFO     | mean x: 1767969473.0
[2026-01-09 16:44:35] 2026-01-09 15:44:03,053 | INFO     | mean y: 2745317.1196581195
[2026-01-09 16:44:35] 2026-01-09 15:44:03,053 | INFO     | intersect: 12176895573.822681
[2026-01-09 16:44:35] 2026-01-09 15:44:03,053 | INFO     | chi2: 0.004897931230219023
[2026-01-09 16:44:35] 2026-01-09 15:44:03,053 | INFO     | current memory leak: -6.89 B/s (using 117 data points, chi2=0.00)
[2026-01-09 16:44:35] 2026-01-09 15:44:03,053 | INFO     | could have reported an average CPU frequency of 2811 MHz (9 samples)
[2026-01-09 16:44:35] 2026-01-09 15:44:03,054 | INFO     | ..............................
[2026-01-09 16:44:35] 2026-01-09 15:44:03,054 | INFO     | . Timing measurements:
[2026-01-09 16:44:35] 2026-01-09 15:44:03,054 | INFO     | . get job = 0 s
[2026-01-09 16:44:35] 2026-01-09 15:44:03,054 | INFO     | . initial setup = 1 s
[2026-01-09 16:44:35] 2026-01-09 15:44:03,054 | INFO     | . payload setup = 8 s
[2026-01-09 16:44:35] 2026-01-09 15:44:03,054 | INFO     | . stage-in = 0 s
[2026-01-09 16:44:35] 2026-01-09 15:44:03,054 | INFO     | . payload execution = 9331 s
[2026-01-09 16:44:35] 2026-01-09 15:44:03,054 | INFO     | . stage-out = 1 s
[2026-01-09 16:44:35] 2026-01-09 15:44:03,054 | INFO     | . log creation = 0 s
[2026-01-09 16:44:35] 2026-01-09 15:44:03,054 | INFO     | ..............................
[2026-01-09 16:44:35] 2026-01-09 15:44:03,292 | INFO     | 
[2026-01-09 16:44:35] 2026-01-09 15:44:03,293 | INFO     | job summary report
[2026-01-09 16:44:35] 2026-01-09 15:44:03,293 | INFO     | --------------------------------------------------
[2026-01-09 16:44:35] 2026-01-09 15:44:03,293 | INFO     | PanDA job id: 6963156375
[2026-01-09 16:44:35] 2026-01-09 15:44:03,294 | INFO     | task id: 47898826
[2026-01-09 16:44:35] 2026-01-09 15:44:03,294 | INFO     | errors: (none)
[2026-01-09 16:44:35] 2026-01-09 15:44:03,294 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 16:44:35] 2026-01-09 15:44:03,294 | INFO     | pilot state: finished 
[2026-01-09 16:44:35] 2026-01-09 15:44:03,294 | INFO     | transexitcode: 0
[2026-01-09 16:44:35] 2026-01-09 15:44:03,294 | INFO     | exeerrorcode: 0
[2026-01-09 16:44:35] 2026-01-09 15:44:03,295 | INFO     | exeerrordiag: 
[2026-01-09 16:44:35] 2026-01-09 15:44:03,295 | INFO     | exitcode: 0
[2026-01-09 16:44:35] 2026-01-09 15:44:03,295 | INFO     | exitmsg: OK
[2026-01-09 16:44:35] 2026-01-09 15:44:03,295 | INFO     | cpuconsumptiontime: 102219 s
[2026-01-09 16:44:35] 2026-01-09 15:44:03,295 | INFO     | nevents: 400
[2026-01-09 16:44:35] 2026-01-09 15:44:03,295 | INFO     | neventsw: 0
[2026-01-09 16:44:35] 2026-01-09 15:44:03,295 | INFO     | pid: 1247842
[2026-01-09 16:44:35] 2026-01-09 15:44:03,296 | INFO     | pgrp: 1247842
[2026-01-09 16:44:35] 2026-01-09 15:44:03,296 | INFO     | corecount: 12
[2026-01-09 16:44:35] 2026-01-09 15:44:03,296 | INFO     | event service: False
[2026-01-09 16:44:35] 2026-01-09 15:44:03,296 | INFO     | sizes: {0: 2283742, 1: 2283997, 2: 2283997, 6: 2284287, 12: 2284315, 9343: 2312753, 9344: 2312880, 9347: 2322018, 9351: 2322220}
[2026-01-09 16:44:35] 2026-01-09 15:44:03,296 | INFO     | --------------------------------------------------
[2026-01-09 16:44:35] 2026-01-09 15:44:03,296 | INFO     | 
[2026-01-09 16:44:35] 2026-01-09 15:44:03,297 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-09 16:44:35] 2026-01-09 15:44:03,316 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 16:44:35] 2026-01-09 15:44:03,317 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 16:44:35] 2026-01-09 15:44:03,317 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 16:44:35] 2026-01-09 15:44:03,317 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 16:44:35] 2026-01-09 15:44:03,318 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 16:44:35] 2026-01-09 15:44:03,318 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 16:44:35] 2026-01-09 15:44:03,318 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 16:44:35] 2026-01-09 15:44:03,318 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 16:44:35] 2026-01-09 15:44:03,318 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 16:44:35] 2026-01-09 15:44:03,318 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 16:44:35] 2026-01-09 15:44:03,319 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 16:44:35] 2026-01-09 15:44:03,319 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 16:44:35] 2026-01-09 15:44:03,319 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 16:44:35] 2026-01-09 15:44:03,319 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 16:44:35] 2026-01-09 15:44:03,319 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 16:44:35] 2026-01-09 15:44:03,319 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 16:44:35] 2026-01-09 15:44:03,320 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 16:44:35] 2026-01-09 15:44:03,320 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 16:44:35] 2026-01-09 15:44:03,320 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 16:44:35] 2026-01-09 15:44:03,320 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 16:44:35] 2026-01-09 15:44:03,320 | INFO     | job 6963156375 has completed (purged errors)
[2026-01-09 16:44:35] 2026-01-09 15:44:03,321 | INFO     | overall cleanup function is called
[2026-01-09 16:44:35] 2026-01-09 15:44:04,330 | INFO     | --- collectZombieJob: --- 10, [1247842]
[2026-01-09 16:44:35] 2026-01-09 15:44:04,330 | INFO     | zombie collector waiting for pid 1247842
[2026-01-09 16:44:35] 2026-01-09 15:44:04,330 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 16:44:35] 2026-01-09 15:44:04,330 | INFO     | collected zombie processes
[2026-01-09 16:44:35] 2026-01-09 15:44:04,331 | INFO     | will attempt to kill all subprocesses of pid=1247842
[2026-01-09 16:44:35] 2026-01-09 15:44:04,462 | INFO     | process IDs to be killed: [1247842] (in reverse order)
[2026-01-09 16:44:35] 2026-01-09 15:44:04,501 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 16:44:35] 2026-01-09 15:44:04,501 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 16:44:35] 2026-01-09 15:44:04,504 | INFO     | did not find any defunct processes belonging to 1247842
[2026-01-09 16:44:35] 2026-01-09 15:44:04,507 | INFO     | did not find any defunct processes belonging to 1247842
[2026-01-09 16:44:35] 2026-01-09 15:44:04,507 | INFO     | ready for new job
[2026-01-09 16:44:35] 2026-01-09 15:44:04,507 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 16:44:35] 2026-01-09 15:44:04,509 | INFO     | ***************************************
[2026-01-09 16:44:35] 2026-01-09 15:44:04,509 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 16:44:35] 2026-01-09 15:44:04,509 | INFO     | ***************************************
[2026-01-09 16:44:35] 2026-01-09 15:44:04,509 | INFO     | 
[2026-01-09 16:44:35] 2026-01-09 15:44:04,510 | INFO     | architecture information:
[2026-01-09 16:44:35] 2026-01-09 15:44:04,510 | INFO     | executing command: cat /etc/os-release
[2026-01-09 16:44:35] 2026-01-09 15:44:04,523 | INFO     | cat /etc/os-release:
[2026-01-09 16:44:35] NAME="CentOS Linux"
[2026-01-09 16:44:35] VERSION="7 (Core)"
[2026-01-09 16:44:35] ID="centos"
[2026-01-09 16:44:35] ID_LIKE="rhel fedora"
[2026-01-09 16:44:35] VERSION_ID="7"
[2026-01-09 16:44:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:44:35] ANSI_COLOR="0;31"
[2026-01-09 16:44:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:44:35] HOME_URL="https://www.centos.org/"
[2026-01-09 16:44:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:44:35] 
[2026-01-09 16:44:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:44:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:44:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:44:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:44:35] 
[2026-01-09 16:44:35] 2026-01-09 15:44:04,524 | INFO     | ***************************************
[2026-01-09 16:44:35] 2026-01-09 15:44:05,027 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-09 16:44:35] 2026-01-09 15:44:05,045 | INFO     | sufficient remaining disk space (779522932736 B)
[2026-01-09 16:44:35] 2026-01-09 15:44:05,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:44:35] 2026-01-09 15:44:05,046 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:44:35] 2026-01-09 15:44:05,046 | INFO     | update_server=False
[2026-01-09 16:44:35] 2026-01-09 15:44:05,046 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:44:35] 2026-01-09 15:44:05,046 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:44:35] 2026-01-09 15:44:05,047 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:44:35] 2026-01-09 15:44:05,225 | INFO     | all job control threads have been joined
[2026-01-09 16:44:35] 2026-01-09 15:44:05,436 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:44:35] 2026-01-09 15:44:05,502 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:44:35] 2026-01-09 15:44:05,502 | INFO     | aborting loop
[2026-01-09 16:44:35] 2026-01-09 15:44:05,608 | INFO     | all data control threads have been joined
[2026-01-09 16:44:35] 2026-01-09 15:44:05,753 | INFO     | all payload control threads have been joined
[2026-01-09 16:44:35] 2026-01-09 15:44:06,052 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:44:35] 2026-01-09 15:44:06,052 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:44:35] 2026-01-09 15:44:06,231 | INFO     | [job] control thread has finished
[2026-01-09 16:44:35] 2026-01-09 15:44:06,365 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:44:35] 2026-01-09 15:44:06,507 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:44:35] 2026-01-09 15:44:06,580 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:44:35] 2026-01-09 15:44:06,614 | INFO     | [data] control thread has finished
[2026-01-09 16:44:35] 2026-01-09 15:44:06,759 | INFO     | [payload] control thread has finished
[2026-01-09 16:44:35] 2026-01-09 15:44:06,856 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:44:35] 2026-01-09 15:44:06,995 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:44:35] 2026-01-09 15:44:07,052 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:44:35] 2026-01-09 15:44:07,102 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:44:35] 2026-01-09 15:44:07,217 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:44:35] 2026-01-09 15:44:07,288 | INFO     | [job] validate thread has finished
[2026-01-09 16:44:35] 2026-01-09 15:44:07,629 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:44:35] 2026-01-09 15:44:09,442 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:44:35] 2026-01-09 15:44:10,009 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:44:35] 2026-01-09 15:44:12,062 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140528267241280)>', '<ExcThread(monitor, started 140527857014528)>']
[2026-01-09 16:44:35] 2026-01-09 15:44:17,088 | INFO     | all workflow threads have been joined
[2026-01-09 16:44:35] 2026-01-09 15:44:17,088 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:44:35] 2026-01-09 15:44:17,088 | INFO     | traces error code: 0
[2026-01-09 16:44:35] 2026-01-09 15:44:17,089 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:44:35] 2026-01-09 15:44:35,404 | INFO     | PID=1240341 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 16:44:35] 2026-01-09 15:44:35,404 | INFO     | .. there are 2 such processes running
[2026-01-09 16:44:35] 2026-01-09 15:44:35,405 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:44:35] 2026-01-09 15:44:35,405 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:44:35] 2026-01-09 15:44:35,405 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:44:35] 2026-01-09 15:44:35,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:44:35] 2026-01-09 15:44:35,406 | CRITICAL | thread 'MainThread' is not alive
[2026-01-09 16:44:35] 2026-01-09 15:44:35,406 | INFO     | [monitor] control thread has ended
[2026-01-09 16:44:35] 2026-01-09 15:44:35,518 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:44:35] 2026-01-09 15:44:35,521 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:44:35] 2026-01-09 15:44:35,523 [wrapper] pilotpid: 1240341
[2026-01-09 16:44:35] 2026-01-09 15:44:35,526 [wrapper] Pilot exit status: 0
[2026-01-09 16:44:35] 2026-01-09 15:44:35,536 [wrapper] pandaids: 6963156375
[2026-01-09 16:44:35] 2026-01-09 15:44:35,572 [wrapper] cleanup supervisor_pilot 1317940 1240342
[2026-01-09 16:44:35] 2026-01-09 15:44:35,575 [wrapper] Test setup, not cleaning
[2026-01-09 16:44:35] 2026-01-09 15:44:35,577 [wrapper] apfmon messages muted
[2026-01-09 16:44:35] 2026-01-09 15:44:35,580 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:44:35] 2026-01-09 15:44:35,582 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:44:35]  *** Error codes and diagnostics ***
[2026-01-09 16:44:35]     "exeErrorCode": 0,
[2026-01-09 16:44:35]     "exeErrorDiag": "",
[2026-01-09 16:44:35]     "pilotErrorCode": 0,
[2026-01-09 16:44:35]     "pilotErrorDiag": "",
[2026-01-09 16:44:35]  *** Listing of results directory ***
[2026-01-09 16:44:35] total 447132
[2026-01-09 16:44:35] -rw-r--r--. 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 16:44:35] -rwx------. 1 boinc boinc     36322 Jan  8 20:10 runpilot2-wrapper.sh
[2026-01-09 16:44:35] -rw-r--r--. 1 boinc boinc      5112 Jan  8 20:11 queuedata.json
[2026-01-09 16:44:35] -rw-r--r--. 1 boinc boinc       100 Jan  9 14:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:44:35] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 14:07 run_atlas
[2026-01-09 16:44:35] -rw-r--r--. 1 boinc boinc       105 Jan  9 14:07 job.xml
[2026-01-09 16:44:35] -rw-r--r--. 1 boinc boinc      6290 Jan  9 14:07 init_data.xml
[2026-01-09 16:44:35] -rw-r--r--. 2 boinc boinc 227049478 Jan  9 14:07 EVNT.47898824._000901.pool.root.1
[2026-01-09 16:44:35] -rw-r--r--. 2 boinc boinc    592392 Jan  9 14:07 input.tar.gz
[2026-01-09 16:44:35] -rw-r--r--. 2 boinc boinc     15847 Jan  9 14:07 start_atlas.sh
[2026-01-09 16:44:35] drwxrwx--x. 2 boinc boinc      4096 Jan  9 14:07 shared
[2026-01-09 16:44:35] -rw-r--r--. 1 boinc boinc         0 Jan  9 14:07 boinc_lockfile
[2026-01-09 16:44:35] -rw-r--r--. 1 boinc boinc      2519 Jan  9 14:07 pandaJob.out
[2026-01-09 16:44:35] -rw-------. 1 boinc boinc    989377 Jan  9 14:07 agis_schedconf.cvmfs.json
[2026-01-09 16:44:35] -rw-------. 1 boinc boinc   1516240 Jan  9 14:07 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:44:35] drwx------. 5 boinc boinc      4096 Jan  9 14:07 pilot3
[2026-01-09 16:44:35] -rw-r--r--. 1 boinc boinc       531 Jan  9 16:43 boinc_task_state.xml
[2026-01-09 16:44:35] -rw-------. 1 boinc boinc 223266265 Jan  9 16:43 HITS.47898826._031545.pool.root.1
[2026-01-09 16:44:35] -rw-------. 1 boinc boinc      1022 Jan  9 16:43 memory_monitor_summary.json
[2026-01-09 16:44:35] -rw-------. 1 boinc boinc        95 Jan  9 16:43 pilot_heartbeat.json
[2026-01-09 16:44:35] -rw-------. 1 boinc boinc    467146 Jan  9 16:43 log.47898826._031545.job.log.tgz.1
[2026-01-09 16:44:35] -rw-------. 1 boinc boinc      7798 Jan  9 16:44 heartbeat.json
[2026-01-09 16:44:35] -rw-r--r--. 1 boinc boinc      8192 Jan  9 16:44 boinc_mmap_file
[2026-01-09 16:44:35] -rw-r--r--. 1 boinc boinc        28 Jan  9 16:44 wrapper_checkpoint.txt
[2026-01-09 16:44:35] -rw-------. 1 boinc boinc       892 Jan  9 16:44 pilotlog.txt
[2026-01-09 16:44:35] -rw-------. 1 boinc boinc   1349037 Jan  9 16:44 log.47898826._031545.job.log.1
[2026-01-09 16:44:35] -rw-------. 1 boinc boinc       357 Jan  9 16:44 output.list
[2026-01-09 16:44:35] -rw-r--r--. 1 boinc boinc       620 Jan  9 16:44 runtime_log
[2026-01-09 16:44:35] -rw-------. 1 boinc boinc   1832960 Jan  9 16:44 result.tar.gz
[2026-01-09 16:44:35] -rw-------. 1 boinc boinc       660 Jan  9 16:44 wSSNDmmZAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm68fKDmukvkPo.diag
[2026-01-09 16:44:35] -rw-r--r--. 1 boinc boinc      8841 Jan  9 16:44 runtime_log.err
[2026-01-09 16:44:35] -rw-r--r--. 1 boinc boinc     21193 Jan  9 16:44 stderr.txt
[2026-01-09 16:44:35] HITS file was successfully produced:
[2026-01-09 16:44:35] -rw-------. 1 boinc boinc 223266265 Jan  9 16:43 shared/HITS.pool.root.1
[2026-01-09 16:44:35]  *** Contents of shared directory: ***
[2026-01-09 16:44:35] total 442164
[2026-01-09 16:44:35] -rw-r--r--. 2 boinc boinc 227049478 Jan  9 14:07 ATLAS.root_0
[2026-01-09 16:44:35] -rw-r--r--. 2 boinc boinc    592392 Jan  9 14:07 input.tar.gz
[2026-01-09 16:44:35] -rw-r--r--. 2 boinc boinc     15847 Jan  9 14:07 start_atlas.sh
[2026-01-09 16:44:35] -rw-------. 1 boinc boinc 223266265 Jan  9 16:43 HITS.pool.root.1
[2026-01-09 16:44:35] -rw-------. 1 boinc boinc   1832960 Jan  9 16:44 result.tar.gz
16:44:37 (1236456): run_atlas exited; CPU time 102414.763883
16:44:37 (1236456): called boinc_finish(0)

</stderr_txt>
]]>

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