Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:01:10 (81383): wrapper (7.7.26015): starting
15:01:10 (81383): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 15:01:10] Arguments: --nthreads 12
[2026-01-09 15:01:10] Threads: 12
[2026-01-09 15:01:10] Checking for CVMFS
[2026-01-09 15:01:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 15:01:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 15:01:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 15:01:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 15:01:10] 2.13.3.0 2429250 21322 294328 154945 2 188 30357904 46080000 6445 130560 0 107762916 99.877 38731007 23215 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-09 15:01:10] CVMFS is ok
[2026-01-09 15:01:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 15:01:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 15:01:10] Further information can be found at the LHC@home message board.
[2026-01-09 15:01:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 15:01:10] Checking for apptainer binary...
[2026-01-09 15:01:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 15:01:10] Running /usr/bin/apptainer --version
[2026-01-09 15:01:10] apptainer version 1.4.5-2.el9
[2026-01-09 15:01:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 15:01:10] mff2103.farm.particle.cz
[2026-01-09 15:01:10] apptainer works
[2026-01-09 15:01:11] Set ATHENA_PROC_NUMBER=12
[2026-01-09 15:01:11] Set ATHENA_CORE_NUMBER=12
[2026-01-09 15:01:11] Starting ATLAS job with PandaID=6962931356
[2026-01-09 15:01:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:10:39]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:10:39]  scope=mc16_13TeV
[2026-01-09 16:10:39]  status=None
[2026-01-09 16:10:39]  status_code=0
[2026-01-09 16:10:39]  storage_token=
[2026-01-09 16:10:39]  surl=/scratch/.boinc/slots/1/PanDA_Pilot-6962931356/log.47961985._000488.job.log.tgz.1
[2026-01-09 16:10:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/93/af/log.47961985._000488.job.log.tgz.1
[2026-01-09 16:10:39]  workdir=None
[2026-01-09 16:10:39] ]
[2026-01-09 16:10:39] 2026-01-09 15:09:58,172 | INFO     | transferring file log.47961985._000488.job.log.tgz.1 from /scratch/.boinc/slots/1/PanDA_Pilot-6962931356/log.47961985._000488.job.log.tgz.1 to /scratch/.boinc/slot
[2026-01-09 16:10:39] 2026-01-09 15:09:58,172 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/1/PanDA_Pilot-6962931356/log.47961985._000488.job.log.tgz.1 /scratch/.boinc/slots/1/log.47961985._000488.j
[2026-01-09 16:10:39] 2026-01-09 15:09:58,199 | INFO     | adding to output.list: log.47961985._000488.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/93/af/log.47961985._000488.job.log.tgz.
[2026-01-09 16:10:39] 2026-01-09 15:09:58,200 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 16:10:39] 2026-01-09 15:09:58,200 | INFO     | summary of transferred files:
[2026-01-09 16:10:39] 2026-01-09 15:09:58,200 | INFO     |  -- lfn=log.47961985._000488.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 16:10:39] 2026-01-09 15:09:58,200 | INFO     | stage-out finished correctly
[2026-01-09 16:10:39] 2026-01-09 15:09:59,595 | INFO     | time since job start (4116s) is within the limit (174528.0s)
[2026-01-09 16:10:39] 2026-01-09 15:09:59,912 | WARNING  | process 93400 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 16:10:39] 2026-01-09 15:09:59,912 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6962931356/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:10:39] 2026-01-09 15:09:59,913 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6962931356/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:10:39] 2026-01-09 15:09:59,914 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-09 16:10:39] 2026-01-09 15:09:59,914 | WARNING  | maxPSS not found in memory monitor output
[2026-01-09 16:10:39] 2026-01-09 15:10:00,063 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 16:10:39] 2026-01-09 15:10:00,351 | INFO     | number of running child processes to parent process 93400: 1
[2026-01-09 16:10:39] 2026-01-09 15:10:00,351 | INFO     | maximum number of monitored processes: 20
[2026-01-09 16:10:39] 2026-01-09 15:10:01,601 | INFO     | time since job start (4118s) is within the limit (174528.0s)
[2026-01-09 16:10:39] 2026-01-09 15:10:02,259 | INFO     | job 6962931356 has state=finished
[2026-01-09 16:10:39] 2026-01-09 15:10:02,259 | INFO     | preparing for final server update for job 6962931356 in state='finished'
[2026-01-09 16:10:39] 2026-01-09 15:10:02,259 | INFO     | this job has now completed (state=finished)
[2026-01-09 16:10:39] 2026-01-09 15:10:02,260 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 16:10:39] 2026-01-09 15:10:02,260 | INFO     | log transfer has been attempted: DONE
[2026-01-09 16:10:39] 2026-01-09 15:10:02,260 | INFO     | job 6962931356 has finished - writing final server update
[2026-01-09 16:10:39] 2026-01-09 15:10:02,260 | INFO     | total number of processed events: 150 (read)
[2026-01-09 16:10:39] 2026-01-09 15:10:02,261 | INFO     | executing command: lscpu
[2026-01-09 16:10:39] 2026-01-09 15:10:02,339 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 16:10:39] 2026-01-09 15:10:02,854 | INFO     | monitor loop #294: job 0:6962931356 is in state 'finished'
[2026-01-09 16:10:39] 2026-01-09 15:10:02,854 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:10:39] 2026-01-09 15:10:03,606 | INFO     | time since job start (4120s) is within the limit (174528.0s)
[2026-01-09 16:10:39] 2026-01-09 15:10:05,356 | INFO     | monitor loop #295: job 0:6962931356 is in state 'finished'
[2026-01-09 16:10:39] 2026-01-09 15:10:05,357 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:10:39] 2026-01-09 15:10:05,610 | INFO     | time since job start (4122s) is within the limit (174528.0s)
[2026-01-09 16:10:39] 2026-01-09 15:10:07,249 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 16:10:39] 2026-01-09 15:10:07,264 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2757.846041666666
[2026-01-09 16:10:39] 2026-01-09 15:10:07,281 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6962931356/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:10:39] 2026-01-09 15:10:07,282 | INFO     | extracted standard info from prmon json
[2026-01-09 16:10:39] 2026-01-09 15:10:07,282 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 16:10:39] 2026-01-09 15:10:07,282 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 16:10:39] 2026-01-09 15:10:07,284 | INFO     | fitting pss+swap vs Time
[2026-01-09 16:10:39] 2026-01-09 15:10:07,284 | INFO     | sum of square deviations: 66945734.7333333
[2026-01-09 16:10:39] 2026-01-09 15:10:07,285 | INFO     | sum of deviations: -3316006090.500002
[2026-01-09 16:10:39] 2026-01-09 15:10:07,285 | INFO     | mean x: 1767969419.4333334
[2026-01-09 16:10:39] 2026-01-09 15:10:07,285 | INFO     | mean y: 3196076.75
[2026-01-09 16:10:39] 2026-01-09 15:10:07,285 | INFO     | intersect: 87575576692.35342
[2026-01-09 16:10:39] 2026-01-09 15:10:07,285 | INFO     | chi2: 0.5282102546103913
[2026-01-09 16:10:39] 2026-01-09 15:10:07,285 | INFO     | current memory leak: -49.53 B/s (using 60 data points, chi2=0.53)
[2026-01-09 16:10:39] 2026-01-09 15:10:07,285 | INFO     | could have reported an average CPU frequency of 2757 MHz (6 samples)
[2026-01-09 16:10:39] 2026-01-09 15:10:07,286 | INFO     | ..............................
[2026-01-09 16:10:39] 2026-01-09 15:10:07,286 | INFO     | . Timing measurements:
[2026-01-09 16:10:39] 2026-01-09 15:10:07,286 | INFO     | . get job = 0 s
[2026-01-09 16:10:39] 2026-01-09 15:10:07,286 | INFO     | . initial setup = 1 s
[2026-01-09 16:10:39] 2026-01-09 15:10:07,286 | INFO     | . payload setup = 7 s
[2026-01-09 16:10:39] 2026-01-09 15:10:07,286 | INFO     | . stage-in = 0 s
[2026-01-09 16:10:39] 2026-01-09 15:10:07,286 | INFO     | . payload execution = 4088 s
[2026-01-09 16:10:39] 2026-01-09 15:10:07,286 | INFO     | . stage-out = 0 s
[2026-01-09 16:10:39] 2026-01-09 15:10:07,286 | INFO     | . log creation = 0 s
[2026-01-09 16:10:39] 2026-01-09 15:10:07,286 | INFO     | ..............................
[2026-01-09 16:10:39] 2026-01-09 15:10:07,376 | INFO     | 
[2026-01-09 16:10:39] 2026-01-09 15:10:07,376 | INFO     | job summary report
[2026-01-09 16:10:39] 2026-01-09 15:10:07,376 | INFO     | --------------------------------------------------
[2026-01-09 16:10:39] 2026-01-09 15:10:07,376 | INFO     | PanDA job id: 6962931356
[2026-01-09 16:10:39] 2026-01-09 15:10:07,376 | INFO     | task id: 47961985
[2026-01-09 16:10:39] 2026-01-09 15:10:07,376 | INFO     | errors: (none)
[2026-01-09 16:10:39] 2026-01-09 15:10:07,376 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 16:10:39] 2026-01-09 15:10:07,376 | INFO     | pilot state: finished 
[2026-01-09 16:10:39] 2026-01-09 15:10:07,376 | INFO     | transexitcode: 0
[2026-01-09 16:10:39] 2026-01-09 15:10:07,377 | INFO     | exeerrorcode: 0
[2026-01-09 16:10:39] 2026-01-09 15:10:07,377 | INFO     | exeerrordiag: 
[2026-01-09 16:10:39] 2026-01-09 15:10:07,377 | INFO     | exitcode: 0
[2026-01-09 16:10:39] 2026-01-09 15:10:07,377 | INFO     | exitmsg: OK
[2026-01-09 16:10:39] 2026-01-09 15:10:07,377 | INFO     | cpuconsumptiontime: 42563 s
[2026-01-09 16:10:39] 2026-01-09 15:10:07,377 | INFO     | nevents: 150
[2026-01-09 16:10:39] 2026-01-09 15:10:07,377 | INFO     | neventsw: 0
[2026-01-09 16:10:39] 2026-01-09 15:10:07,377 | INFO     | pid: 93400
[2026-01-09 16:10:39] 2026-01-09 15:10:07,377 | INFO     | pgrp: 93400
[2026-01-09 16:10:39] 2026-01-09 15:10:07,377 | INFO     | corecount: 12
[2026-01-09 16:10:39] 2026-01-09 15:10:07,377 | INFO     | event service: False
[2026-01-09 16:10:39] 2026-01-09 15:10:07,377 | INFO     | sizes: {0: 2284378, 1: 2284577, 7: 2284839, 12: 2284867, 4097: 2311520, 4098: 2320516, 4100: 2320700, 4107: 2320946}
[2026-01-09 16:10:39] 2026-01-09 15:10:07,377 | INFO     | --------------------------------------------------
[2026-01-09 16:10:39] 2026-01-09 15:10:07,378 | INFO     | 
[2026-01-09 16:10:39] 2026-01-09 15:10:07,378 | INFO     | executing command: ls -lF /scratch/.boinc/slots/1
[2026-01-09 16:10:39] 2026-01-09 15:10:07,402 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 16:10:39] 2026-01-09 15:10:07,403 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 16:10:39] 2026-01-09 15:10:07,403 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 16:10:39] 2026-01-09 15:10:07,403 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 16:10:39] 2026-01-09 15:10:07,403 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 16:10:39] 2026-01-09 15:10:07,403 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 16:10:39] 2026-01-09 15:10:07,403 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 16:10:39] 2026-01-09 15:10:07,403 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 16:10:39] 2026-01-09 15:10:07,403 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 16:10:39] 2026-01-09 15:10:07,403 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 16:10:39] 2026-01-09 15:10:07,404 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 16:10:39] 2026-01-09 15:10:07,404 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 16:10:39] 2026-01-09 15:10:07,404 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 16:10:39] 2026-01-09 15:10:07,404 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 16:10:39] 2026-01-09 15:10:07,404 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 16:10:39] 2026-01-09 15:10:07,404 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 16:10:39] 2026-01-09 15:10:07,404 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 16:10:39] 2026-01-09 15:10:07,404 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 16:10:39] 2026-01-09 15:10:07,404 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 16:10:39] 2026-01-09 15:10:07,404 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 16:10:39] 2026-01-09 15:10:07,404 | INFO     | job 6962931356 has completed (purged errors)
[2026-01-09 16:10:39] 2026-01-09 15:10:07,405 | INFO     | overall cleanup function is called
[2026-01-09 16:10:39] 2026-01-09 15:10:08,426 | INFO     | --- collectZombieJob: --- 10, [93400]
[2026-01-09 16:10:39] 2026-01-09 15:10:08,427 | INFO     | zombie collector waiting for pid 93400
[2026-01-09 16:10:39] 2026-01-09 15:10:08,427 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 16:10:39] 2026-01-09 15:10:08,427 | INFO     | collected zombie processes
[2026-01-09 16:10:39] 2026-01-09 15:10:08,427 | INFO     | will attempt to kill all subprocesses of pid=93400
[2026-01-09 16:10:39] 2026-01-09 15:10:08,767 | INFO     | process IDs to be killed: [93400] (in reverse order)
[2026-01-09 16:10:39] 2026-01-09 15:10:08,881 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 16:10:39] 2026-01-09 15:10:08,881 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 16:10:39] 2026-01-09 15:10:08,893 | INFO     | did not find any defunct processes belonging to 93400
[2026-01-09 16:10:39] 2026-01-09 15:10:08,903 | INFO     | did not find any defunct processes belonging to 93400
[2026-01-09 16:10:39] 2026-01-09 15:10:08,903 | INFO     | ready for new job
[2026-01-09 16:10:39] 2026-01-09 15:10:08,903 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 16:10:39] 2026-01-09 15:10:08,905 | INFO     | ***************************************
[2026-01-09 16:10:39] 2026-01-09 15:10:08,905 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 16:10:39] 2026-01-09 15:10:08,905 | INFO     | ***************************************
[2026-01-09 16:10:39] 2026-01-09 15:10:08,905 | INFO     | 
[2026-01-09 16:10:39] 2026-01-09 15:10:08,911 | INFO     | architecture information:
[2026-01-09 16:10:39] 2026-01-09 15:10:08,911 | INFO     | executing command: cat /etc/os-release
[2026-01-09 16:10:39] 2026-01-09 15:10:08,934 | INFO     | cat /etc/os-release:
[2026-01-09 16:10:39] NAME="CentOS Linux"
[2026-01-09 16:10:39] VERSION="7 (Core)"
[2026-01-09 16:10:39] ID="centos"
[2026-01-09 16:10:39] ID_LIKE="rhel fedora"
[2026-01-09 16:10:39] VERSION_ID="7"
[2026-01-09 16:10:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:10:39] ANSI_COLOR="0;31"
[2026-01-09 16:10:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:10:39] HOME_URL="https://www.centos.org/"
[2026-01-09 16:10:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:10:39] 
[2026-01-09 16:10:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:10:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:10:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:10:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:10:39] 
[2026-01-09 16:10:39] 2026-01-09 15:10:08,935 | INFO     | ***************************************
[2026-01-09 16:10:39] 2026-01-09 15:10:09,438 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2026-01-09 16:10:39] 2026-01-09 15:10:09,458 | INFO     | sufficient remaining disk space (1680418537472 B)
[2026-01-09 16:10:39] 2026-01-09 15:10:09,459 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:10:39] 2026-01-09 15:10:09,459 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:10:39] 2026-01-09 15:10:09,459 | INFO     | update_server=False
[2026-01-09 16:10:39] 2026-01-09 15:10:09,459 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:10:39] 2026-01-09 15:10:09,459 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:10:39] 2026-01-09 15:10:09,460 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:10:39] 2026-01-09 15:10:09,460 | INFO     | aborting loop
[2026-01-09 16:10:39] 2026-01-09 15:10:09,821 | INFO     | all data control threads have been joined
[2026-01-09 16:10:39] 2026-01-09 15:10:10,463 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:10:39] 2026-01-09 15:10:10,465 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:10:39] 2026-01-09 15:10:10,527 | INFO     | all job control threads have been joined
[2026-01-09 16:10:39] 2026-01-09 15:10:10,660 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:10:39] 2026-01-09 15:10:10,684 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:10:39] 2026-01-09 15:10:10,734 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:10:39] 2026-01-09 15:10:10,735 | INFO     | all payload control threads have been joined
[2026-01-09 16:10:39] 2026-01-09 15:10:10,827 | INFO     | [data] control thread has finished
[2026-01-09 16:10:39] 2026-01-09 15:10:11,254 | INFO     | [job] validate thread has finished
[2026-01-09 16:10:39] 2026-01-09 15:10:11,297 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:10:39] 2026-01-09 15:10:11,425 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:10:39] 2026-01-09 15:10:11,464 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:10:39] 2026-01-09 15:10:11,532 | INFO     | [job] control thread has finished
[2026-01-09 16:10:39] 2026-01-09 15:10:11,552 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:10:39] 2026-01-09 15:10:11,555 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:10:39] 2026-01-09 15:10:11,663 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:10:39] 2026-01-09 15:10:11,741 | INFO     | [payload] control thread has finished
[2026-01-09 16:10:39] 2026-01-09 15:10:12,386 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:10:39] 2026-01-09 15:10:13,391 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:10:39] 2026-01-09 15:10:14,666 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:10:39] 2026-01-09 15:10:29,420 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:10:39] 2026-01-09 15:10:30,289 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139706996836160)>', '<ExcThread(monitor, started 139706723440384)>']
[2026-01-09 16:10:39] 2026-01-09 15:10:35,314 | INFO     | all workflow threads have been joined
[2026-01-09 16:10:39] 2026-01-09 15:10:35,315 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:10:39] 2026-01-09 15:10:35,315 | INFO     | traces error code: 0
[2026-01-09 16:10:39] 2026-01-09 15:10:35,315 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:10:39] 2026-01-09 15:10:39,096 | INFO     | PID=86329 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 16:10:39] 2026-01-09 15:10:39,097 | INFO     | .. there are 8 such processes running
[2026-01-09 16:10:39] 2026-01-09 15:10:39,098 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:10:39] 2026-01-09 15:10:39,098 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:10:39] 2026-01-09 15:10:39,098 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:10:39] 2026-01-09 15:10:39,098 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:10:39] 2026-01-09 15:10:39,098 | INFO     | [monitor] control thread has ended
[2026-01-09 16:10:39] 2026-01-09 15:10:39,204 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:10:39] 2026-01-09 15:10:39,208 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:10:39] 2026-01-09 15:10:39,210 [wrapper] pilotpid: 86329
[2026-01-09 16:10:39] 2026-01-09 15:10:39,213 [wrapper] Pilot exit status: 0
[2026-01-09 16:10:39] 2026-01-09 15:10:39,224 [wrapper] pandaids: 6962931356
[2026-01-09 16:10:39] 2026-01-09 15:10:39,308 [wrapper] cleanup supervisor_pilot  235955 86330
[2026-01-09 16:10:39] 2026-01-09 15:10:39,311 [wrapper] Test setup, not cleaning
[2026-01-09 16:10:39] 2026-01-09 15:10:39,314 [wrapper] apfmon messages muted
[2026-01-09 16:10:39] 2026-01-09 15:10:39,318 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:10:39] 2026-01-09 15:10:39,321 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:10:39]  *** Error codes and diagnostics ***
[2026-01-09 16:10:39]     "exeErrorCode": 0,
[2026-01-09 16:10:39]     "exeErrorDiag": "",
[2026-01-09 16:10:39]     "pilotErrorCode": 0,
[2026-01-09 16:10:39]     "pilotErrorDiag": "",
[2026-01-09 16:10:39]  *** Listing of results directory ***
[2026-01-09 16:10:39] total 565040
[2026-01-09 16:10:39] -rwx------ 1 boinc boinc     36322 Jan  8 09:17 runpilot2-wrapper.sh
[2026-01-09 16:10:39] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:23 queuedata.json
[2026-01-09 16:10:39] -rw-r--r-- 1 boinc boinc    579449 Jan  8 09:23 pilot3.tar.gz
[2026-01-09 16:10:39] -rw-r--r-- 1 boinc boinc       100 Jan  9 15:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:10:39] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 15:01 run_atlas
[2026-01-09 16:10:39] -rw-r--r-- 1 boinc boinc       105 Jan  9 15:01 job.xml
[2026-01-09 16:10:39] -rw-r--r-- 2 boinc boinc 414901083 Jan  9 15:01 EVNT.47961981._000022.pool.root.1
[2026-01-09 16:10:39] -rw-r--r-- 1 boinc boinc      6674 Jan  9 15:01 init_data.xml
[2026-01-09 16:10:39] -rw-r--r-- 2 boinc boinc     15847 Jan  9 15:01 start_atlas.sh
[2026-01-09 16:10:39] drwxrwx--x 2 boinc boinc      4096 Jan  9 15:01 shared
[2026-01-09 16:10:39] -rw-r--r-- 2 boinc boinc    592606 Jan  9 15:01 input.tar.gz
[2026-01-09 16:10:39] -rw-r--r-- 1 boinc boinc         0 Jan  9 15:01 boinc_lockfile
[2026-01-09 16:10:39] -rw-r--r-- 1 boinc boinc      2875 Jan  9 15:01 pandaJob.out
[2026-01-09 16:10:39] -rw------- 1 boinc boinc    989377 Jan  9 15:01 agis_schedconf.cvmfs.json
[2026-01-09 16:10:39] -rw------- 1 boinc boinc   1516240 Jan  9 15:01 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:10:39] drwx------ 5 boinc boinc      4096 Jan  9 15:01 pilot3
[2026-01-09 16:10:39] -rw-r--r-- 1 boinc boinc       529 Jan  9 16:02 boinc_task_state.xml
[2026-01-09 16:10:39] -rw------- 1 boinc boinc 155189268 Jan  9 16:09 HITS.47961985._000488.pool.root.1
[2026-01-09 16:10:39] -rw------- 1 boinc boinc      1027 Jan  9 16:09 memory_monitor_summary.json
[2026-01-09 16:10:39] -rw------- 1 boinc boinc   1682309 Jan  9 16:09 log.47961985._000488.job.log.tgz.1
[2026-01-09 16:10:39] -rw------- 1 boinc boinc      8555 Jan  9 16:10 heartbeat.json
[2026-01-09 16:10:39] -rw------- 1 boinc boinc        95 Jan  9 16:10 pilot_heartbeat.json
[2026-01-09 16:10:39] -rw------- 1 boinc boinc       820 Jan  9 16:10 pilotlog.txt
[2026-01-09 16:10:39] -rw-r--r-- 1 boinc boinc      8192 Jan  9 16:10 boinc_mmap_file
[2026-01-09 16:10:39] -rw------- 1 boinc boinc    615920 Jan  9 16:10 log.47961985._000488.job.log.1
[2026-01-09 16:10:39] -rw------- 1 boinc boinc       353 Jan  9 16:10 output.list
[2026-01-09 16:10:39] -rw-r--r-- 1 boinc boinc       620 Jan  9 16:10 runtime_log
[2026-01-09 16:10:39] -rw------- 1 boinc boinc   2314240 Jan  9 16:10 result.tar.gz
[2026-01-09 16:10:39] -rw-r--r-- 1 boinc boinc      8880 Jan  9 16:10 runtime_log.err
[2026-01-09 16:10:39] -rw------- 1 boinc boinc       665 Jan  9 16:10 N8MNDmbO0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSqeKDm60XLlm.diag
[2026-01-09 16:10:39] -rw-r--r-- 1 boinc boinc        27 Jan  9 16:10 wrapper_checkpoint.txt
[2026-01-09 16:10:39] -rw-r--r-- 1 boinc boinc     22116 Jan  9 16:10 stderr.txt
[2026-01-09 16:10:39] HITS file was successfully produced:
[2026-01-09 16:10:39] -rw------- 1 boinc boinc 155189268 Jan  9 16:09 shared/HITS.pool.root.1
[2026-01-09 16:10:39]  *** Contents of shared directory: ***
[2026-01-09 16:10:39] total 559600
[2026-01-09 16:10:39] -rw-r--r-- 2 boinc boinc 414901083 Jan  9 15:01 ATLAS.root_0
[2026-01-09 16:10:39] -rw-r--r-- 2 boinc boinc     15847 Jan  9 15:01 start_atlas.sh
[2026-01-09 16:10:39] -rw-r--r-- 2 boinc boinc    592606 Jan  9 15:01 input.tar.gz
[2026-01-09 16:10:39] -rw------- 1 boinc boinc 155189268 Jan  9 16:09 HITS.pool.root.1
[2026-01-09 16:10:39] -rw------- 1 boinc boinc   2314240 Jan  9 16:10 result.tar.gz
16:10:41 (81383): run_atlas exited; CPU time 42512.346251
16:10:41 (81383): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN