Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:22:14 (3826010): wrapper (7.7.26015): starting
04:22:14 (3826010): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 04:22:14] Arguments: --nthreads 8
[2026-01-09 04:22:14] Threads: 8
[2026-01-09 04:22:14] Checking for CVMFS
[2026-01-09 04:22:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 04:22:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 04:22:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 04:22:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 04:22:18] 2.13.3.0 12275 93222 368932 154938 1 372 29505139 40960001 12402 16776704 25 434369977 99.627 430289122 37151 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 04:22:18] CVMFS is ok
[2026-01-09 04:22:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 04:22:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 04:22:18] Further information can be found at the LHC@home message board.
[2026-01-09 04:22:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 04:22:18] Checking for apptainer binary...
[2026-01-09 04:22:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 04:22:18] Running /usr/bin/apptainer --version
[2026-01-09 04:22:18] apptainer version 1.4.5-2.el9
[2026-01-09 04:22:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 04:22:19] c7-11-11.aglt2.org
[2026-01-09 04:22:19] apptainer works
[2026-01-09 04:22:19] Set ATHENA_PROC_NUMBER=8
[2026-01-09 04:22:19] Set ATHENA_CORE_NUMBER=8
[2026-01-09 04:22:19] Starting ATLAS job with PandaID=6963144968
[2026-01-09 04:22:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 09:28:58]  *** The last 200 lines of the pilot log: ***
[2026-01-09 09:28:58] 2026-01-09 14:27:51,840 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 09:28:58] 2026-01-09 14:27:51,849 | INFO     | time since job start (18271s) is within the limit (349056.0s)
[2026-01-09 09:28:58] 2026-01-09 14:27:53,856 | INFO     | time since job start (18273s) is within the limit (349056.0s)
[2026-01-09 09:28:58] 2026-01-09 14:27:54,345 | INFO     | monitor loop #1181: job 0:6963144968 is in state 'finished'
[2026-01-09 09:28:58] 2026-01-09 14:27:54,345 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 09:28:58] 2026-01-09 14:27:55,863 | INFO     | time since job start (18275s) is within the limit (349056.0s)
[2026-01-09 09:28:58] 2026-01-09 14:27:56,850 | INFO     | monitor loop #1182: job 0:6963144968 is in state 'finished'
[2026-01-09 09:28:58] 2026-01-09 14:27:56,850 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 09:28:58] 2026-01-09 14:27:57,157 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 09:28:58] 2026-01-09 14:27:57,160 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3291.1032499999997
[2026-01-09 09:28:58] 2026-01-09 14:27:57,169 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963144968/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 09:28:58] 2026-01-09 14:27:57,170 | INFO     | extracted standard info from prmon json
[2026-01-09 09:28:58] 2026-01-09 14:27:57,170 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 09:28:58] 2026-01-09 14:27:57,170 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 09:28:58] 2026-01-09 14:27:57,170 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 09:28:58] 2026-01-09 14:27:57,170 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 09:28:58] 2026-01-09 14:27:57,174 | INFO     | fitting pss+swap vs Time
[2026-01-09 09:28:58] 2026-01-09 14:27:57,175 | INFO     | sum of square deviations: 8205226414.513417
[2026-01-09 09:28:58] 2026-01-09 14:27:57,177 | INFO     | sum of deviations: -75487194869.16447
[2026-01-09 09:28:58] 2026-01-09 14:27:57,177 | INFO     | mean x: 1767959744.795302
[2026-01-09 09:28:58] 2026-01-09 14:27:57,177 | INFO     | mean y: 2570077.8825503355
[2026-01-09 09:28:58] 2026-01-09 14:27:57,177 | INFO     | intersect: 16267608363.741423
[2026-01-09 09:28:58] 2026-01-09 14:27:57,177 | INFO     | chi2: 1.9291881177523265
[2026-01-09 09:28:58] 2026-01-09 14:27:57,177 | INFO     | sum of square deviations: 7799096801.569928
[2026-01-09 09:28:58] 2026-01-09 14:27:57,180 | INFO     | sum of deviations: -74174278288.4028
[2026-01-09 09:28:58] 2026-01-09 14:27:57,180 | INFO     | mean x: 1767959592.3003414
[2026-01-09 09:28:58] 2026-01-09 14:27:57,180 | INFO     | mean y: 2570572.0273037544
[2026-01-09 09:28:58] 2026-01-09 14:27:57,180 | INFO     | intersect: 16816969743.933887
[2026-01-09 09:28:58] 2026-01-09 14:27:57,180 | INFO     | chi2: 1.9245038331079412
[2026-01-09 09:28:58] 2026-01-09 14:27:57,180 | INFO     | current chi2=1.9245038331079412 (change=0.24281119095025885 %)
[2026-01-09 09:28:58] 2026-01-09 14:27:57,180 | INFO     | right removable region: 292
[2026-01-09 09:28:58] 2026-01-09 14:27:57,180 | INFO     | sum of square deviations: 7799043121.569928
[2026-01-09 09:28:58] 2026-01-09 14:27:57,182 | INFO     | sum of deviations: -118066417116.2559
[2026-01-09 09:28:58] 2026-01-09 14:27:57,182 | INFO     | mean x: 1767959897.3003414
[2026-01-09 09:28:58] 2026-01-09 14:27:57,183 | INFO     | mean y: 2585923.5597269624
[2026-01-09 09:28:58] 2026-01-09 14:27:57,183 | INFO     | intersect: 26766983481.78952
[2026-01-09 09:28:58] 2026-01-09 14:27:57,183 | INFO     | chi2: 0.512410027679721
[2026-01-09 09:28:58] 2026-01-09 14:27:57,183 | INFO     | current chi2=0.512410027679721 (change=73.4390844021617 %)
[2026-01-09 09:28:58] 2026-01-09 14:27:57,183 | INFO     | sum of square deviations: 7406487991.111074
[2026-01-09 09:28:58] 2026-01-09 14:27:57,185 | INFO     | sum of deviations: -109282632339.58328
[2026-01-09 09:28:58] 2026-01-09 14:27:57,185 | INFO     | mean x: 1767960049.8055556
[2026-01-09 09:28:58] 2026-01-09 14:27:57,185 | INFO     | mean y: 2582496.9895833335
[2026-01-09 09:28:58] 2026-01-09 14:27:57,185 | INFO     | intersect: 26088809646.19315
[2026-01-09 09:28:58] 2026-01-09 14:27:57,185 | INFO     | chi2: 0.5013598787851207
[2026-01-09 09:28:58] 2026-01-09 14:27:57,185 | INFO     | current chi2=0.5013598787851207 (change=2.1565052004616803 %)
[2026-01-09 09:28:58] 2026-01-09 14:27:57,185 | INFO     | left removable region: 20
[2026-01-09 09:28:58] 2026-01-09 14:27:57,186 | INFO     | sum of square deviations: 6239281780.808829
[2026-01-09 09:28:58] 2026-01-09 14:27:57,187 | INFO     | sum of deviations: -81402860542.09554
[2026-01-09 09:28:58] 2026-01-09 14:27:57,188 | INFO     | mean x: 1767960171.8161764
[2026-01-09 09:28:58] 2026-01-09 14:27:57,188 | INFO     | mean y: 2572451.658088235
[2026-01-09 09:28:58] 2026-01-09 14:27:57,188 | INFO     | intersect: 23068851611.063965
[2026-01-09 09:28:58] 2026-01-09 14:27:57,188 | INFO     | chi2: 0.451156378273956
[2026-01-09 09:28:58] 2026-01-09 14:27:57,188 | INFO     | current memory leak: -13.05 B/s (using 272 data points, chi2=0.45)
[2026-01-09 09:28:58] 2026-01-09 14:27:57,189 | INFO     | could have reported an average CPU frequency of 3291 MHz (13 samples)
[2026-01-09 09:28:58] 2026-01-09 14:27:57,189 | INFO     | ..............................
[2026-01-09 09:28:58] 2026-01-09 14:27:57,189 | INFO     | . Timing measurements:
[2026-01-09 09:28:58] 2026-01-09 14:27:57,189 | INFO     | . get job = 0 s
[2026-01-09 09:28:58] 2026-01-09 14:27:57,189 | INFO     | . initial setup = 3 s
[2026-01-09 09:28:58] 2026-01-09 14:27:57,189 | INFO     | . payload setup = 18 s
[2026-01-09 09:28:58] 2026-01-09 14:27:57,189 | INFO     | . stage-in = 0 s
[2026-01-09 09:28:58] 2026-01-09 14:27:57,189 | INFO     | . payload execution = 18190 s
[2026-01-09 09:28:58] 2026-01-09 14:27:57,189 | INFO     | . stage-out = 2 s
[2026-01-09 09:28:58] 2026-01-09 14:27:57,189 | INFO     | . log creation = 0 s
[2026-01-09 09:28:58] 2026-01-09 14:27:57,189 | INFO     | ..............................
[2026-01-09 09:28:58] 2026-01-09 14:27:57,261 | INFO     | 
[2026-01-09 09:28:58] 2026-01-09 14:27:57,261 | INFO     | job summary report
[2026-01-09 09:28:58] 2026-01-09 14:27:57,261 | INFO     | --------------------------------------------------
[2026-01-09 09:28:58] 2026-01-09 14:27:57,261 | INFO     | PanDA job id: 6963144968
[2026-01-09 09:28:58] 2026-01-09 14:27:57,261 | INFO     | task id: 47898826
[2026-01-09 09:28:58] 2026-01-09 14:27:57,261 | INFO     | errors: (none)
[2026-01-09 09:28:58] 2026-01-09 14:27:57,261 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 09:28:58] 2026-01-09 14:27:57,261 | INFO     | pilot state: finished 
[2026-01-09 09:28:58] 2026-01-09 14:27:57,261 | INFO     | transexitcode: 0
[2026-01-09 09:28:58] 2026-01-09 14:27:57,261 | INFO     | exeerrorcode: 0
[2026-01-09 09:28:58] 2026-01-09 14:27:57,261 | INFO     | exeerrordiag: 
[2026-01-09 09:28:58] 2026-01-09 14:27:57,261 | INFO     | exitcode: 0
[2026-01-09 09:28:58] 2026-01-09 14:27:57,262 | INFO     | exitmsg: OK
[2026-01-09 09:28:58] 2026-01-09 14:27:57,262 | INFO     | cpuconsumptiontime: 46603 s
[2026-01-09 09:28:58] 2026-01-09 14:27:57,262 | INFO     | nevents: 400
[2026-01-09 09:28:58] 2026-01-09 14:27:57,262 | INFO     | neventsw: 0
[2026-01-09 09:28:58] 2026-01-09 14:27:57,262 | INFO     | pid: 3840365
[2026-01-09 09:28:58] 2026-01-09 14:27:57,262 | INFO     | pgrp: 3840365
[2026-01-09 09:28:58] 2026-01-09 14:27:57,262 | INFO     | corecount: 8
[2026-01-09 09:28:58] 2026-01-09 14:27:57,262 | INFO     | event service: False
[2026-01-09 09:28:58] 2026-01-09 14:27:57,262 | INFO     | sizes: {0: 2283141, 1: 2283997, 12: 2283997, 22: 2284025, 23: 2284315, 33: 2284343, 18213: 2317072, 18216: 2326070, 18218: 2326126, 18225: 2326320}
[2026-01-09 09:28:58] 2026-01-09 14:27:57,262 | INFO     | --------------------------------------------------
[2026-01-09 09:28:58] 2026-01-09 14:27:57,262 | INFO     | 
[2026-01-09 09:28:58] 2026-01-09 14:27:57,262 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 09:28:58] 2026-01-09 14:27:57,286 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 09:28:58] 2026-01-09 14:27:57,287 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 09:28:58] 2026-01-09 14:27:57,287 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 09:28:58] 2026-01-09 14:27:57,287 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 09:28:58] 2026-01-09 14:27:57,287 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 09:28:58] 2026-01-09 14:27:57,287 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 09:28:58] 2026-01-09 14:27:57,287 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 09:28:58] 2026-01-09 14:27:57,287 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 09:28:58] 2026-01-09 14:27:57,287 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 09:28:58] 2026-01-09 14:27:57,287 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 09:28:58] 2026-01-09 14:27:57,287 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 09:28:58] 2026-01-09 14:27:57,288 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 09:28:58] 2026-01-09 14:27:57,288 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 09:28:58] 2026-01-09 14:27:57,288 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 09:28:58] 2026-01-09 14:27:57,288 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 09:28:58] 2026-01-09 14:27:57,288 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 09:28:58] 2026-01-09 14:27:57,288 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 09:28:58] 2026-01-09 14:27:57,288 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 09:28:58] 2026-01-09 14:27:57,288 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 09:28:58] 2026-01-09 14:27:57,288 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 09:28:58] 2026-01-09 14:27:57,288 | INFO     | job 6963144968 has completed (purged errors)
[2026-01-09 09:28:58] 2026-01-09 14:27:57,288 | INFO     | overall cleanup function is called
[2026-01-09 09:28:58] 2026-01-09 14:27:58,298 | INFO     | --- collectZombieJob: --- 10, [3840365]
[2026-01-09 09:28:58] 2026-01-09 14:27:58,298 | INFO     | zombie collector waiting for pid 3840365
[2026-01-09 09:28:58] 2026-01-09 14:27:58,298 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 09:28:58] 2026-01-09 14:27:58,298 | INFO     | collected zombie processes
[2026-01-09 09:28:58] 2026-01-09 14:27:58,298 | INFO     | will attempt to kill all subprocesses of pid=3840365
[2026-01-09 09:28:58] 2026-01-09 14:27:58,832 | INFO     | process IDs to be killed: [3840365] (in reverse order)
[2026-01-09 09:28:58] 2026-01-09 14:27:59,000 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 09:28:58] 2026-01-09 14:27:59,001 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 09:28:58] 2026-01-09 14:27:59,023 | INFO     | did not find any defunct processes belonging to 3840365
[2026-01-09 09:28:58] 2026-01-09 14:27:59,042 | INFO     | did not find any defunct processes belonging to 3840365
[2026-01-09 09:28:58] 2026-01-09 14:27:59,042 | INFO     | ready for new job
[2026-01-09 09:28:58] 2026-01-09 14:27:59,042 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 09:28:58] 2026-01-09 14:27:59,046 | INFO     | ***************************************
[2026-01-09 09:28:58] 2026-01-09 14:27:59,046 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 09:28:58] 2026-01-09 14:27:59,046 | INFO     | ***************************************
[2026-01-09 09:28:58] 2026-01-09 14:27:59,046 | INFO     | 
[2026-01-09 09:28:58] 2026-01-09 14:27:59,065 | INFO     | architecture information:
[2026-01-09 09:28:58] 2026-01-09 14:27:59,066 | INFO     | executing command: cat /etc/os-release
[2026-01-09 09:28:58] 2026-01-09 14:27:59,090 | INFO     | cat /etc/os-release:
[2026-01-09 09:28:58] NAME="CentOS Linux"
[2026-01-09 09:28:58] VERSION="7 (Core)"
[2026-01-09 09:28:58] ID="centos"
[2026-01-09 09:28:58] ID_LIKE="rhel fedora"
[2026-01-09 09:28:58] VERSION_ID="7"
[2026-01-09 09:28:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 09:28:58] ANSI_COLOR="0;31"
[2026-01-09 09:28:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 09:28:58] HOME_URL="https://www.centos.org/"
[2026-01-09 09:28:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 09:28:58] 
[2026-01-09 09:28:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 09:28:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 09:28:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 09:28:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 09:28:58] 
[2026-01-09 09:28:58] 2026-01-09 14:27:59,090 | INFO     | ***************************************
[2026-01-09 09:28:58] 2026-01-09 14:27:59,610 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 09:28:58] 2026-01-09 14:27:59,656 | INFO     | sufficient remaining disk space (85008056320 B)
[2026-01-09 09:28:58] 2026-01-09 14:27:59,656 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 09:28:58] 2026-01-09 14:27:59,656 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 09:28:58] 2026-01-09 14:27:59,656 | INFO     | update_server=False
[2026-01-09 09:28:58] 2026-01-09 14:27:59,656 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 09:28:58] 2026-01-09 14:27:59,657 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 09:28:58] 2026-01-09 14:27:59,776 | INFO     | all job control threads have been joined
[2026-01-09 09:28:58] 2026-01-09 14:27:59,811 | INFO     | all payload control threads have been joined
[2026-01-09 09:28:58] 2026-01-09 14:28:00,361 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:28:58] 2026-01-09 14:28:00,361 | INFO     | aborting loop
[2026-01-09 09:28:58] 2026-01-09 14:28:00,609 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 09:28:58] 2026-01-09 14:28:00,662 | INFO     | [job] retrieve thread has finished
[2026-01-09 09:28:58] 2026-01-09 14:28:00,666 | INFO     | [payload] validate_post thread has finished
[2026-01-09 09:28:58] 2026-01-09 14:28:00,720 | INFO     | all data control threads have been joined
[2026-01-09 09:28:58] 2026-01-09 14:28:00,783 | INFO     | [job] control thread has finished
[2026-01-09 09:28:58] 2026-01-09 14:28:00,817 | INFO     | [payload] control thread has finished
[2026-01-09 09:28:58] 2026-01-09 14:28:00,930 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 09:28:58] 2026-01-09 14:28:01,367 | INFO     | [job] job monitor thread has finished
[2026-01-09 09:28:58] 2026-01-09 14:28:01,372 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 09:28:58] 2026-01-09 14:28:01,373 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 09:28:58] 2026-01-09 14:28:01,455 | INFO     | [job] validate thread has finished
[2026-01-09 09:28:58] 2026-01-09 14:28:01,664 | INFO     | [data] copytool_out thread has finished
[2026-01-09 09:28:58] 2026-01-09 14:28:01,727 | INFO     | [data] control thread has finished
[2026-01-09 09:28:58] 2026-01-09 14:28:01,728 | INFO     | [payload] failed_post thread has finished
[2026-01-09 09:28:58] 2026-01-09 14:28:01,821 | INFO     | [data] copytool_in thread has finished
[2026-01-09 09:28:58] 2026-01-09 14:28:02,276 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:28:58] 2026-01-09 14:28:03,282 | INFO     | [job] queue monitor thread has finished
[2026-01-09 09:28:58] 2026-01-09 14:28:04,622 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 09:28:58] 2026-01-09 14:28:09,802 | INFO     | job.realtimelogging is not enabled
[2026-01-09 09:28:58] 2026-01-09 14:28:10,808 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 09:28:58] 2026-01-09 14:28:29,493 | INFO     | PID=3831159 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 09:28:58] 2026-01-09 14:28:29,493 | INFO     | .. there are 15 such processes running
[2026-01-09 09:28:58] 2026-01-09 14:28:29,506 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 09:28:58] 2026-01-09 14:28:29,506 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 09:28:58] 2026-01-09 14:28:29,506 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 09:28:58] 2026-01-09 14:28:51,611 | INFO     | [monitor] cgroup control has ended
[2026-01-09 09:28:58] 2026-01-09 14:28:52,549 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139928210642752)>', '<ExcThread(monitor, started 139927241074432)>']
[2026-01-09 09:28:58] 2026-01-09 14:28:52,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 09:28:58] 2026-01-09 14:28:52,650 | INFO     | [monitor] control thread has ended
[2026-01-09 09:28:58] 2026-01-09 14:28:57,575 | INFO     | all workflow threads have been joined
[2026-01-09 09:28:58] 2026-01-09 14:28:57,576 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 09:28:58] 2026-01-09 14:28:57,576 | INFO     | traces error code: 0
[2026-01-09 09:28:58] 2026-01-09 14:28:57,577 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 09:28:58] 2026-01-09 14:28:57,825 [wrapper] ==== pilot stdout END ====
[2026-01-09 09:28:58] 2026-01-09 14:28:57,829 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 09:28:58] 2026-01-09 14:28:57,833 [wrapper] pilotpid: 3831159
[2026-01-09 09:28:58] 2026-01-09 14:28:57,846 [wrapper] Pilot exit status: 0
[2026-01-09 09:28:58] 2026-01-09 14:28:57,864 [wrapper] pandaids: 6963144968
[2026-01-09 09:28:58] 2026-01-09 14:28:57,975 [wrapper] cleanup supervisor_pilot  697076 3831160
[2026-01-09 09:28:58] 2026-01-09 14:28:57,979 [wrapper] Test setup, not cleaning
[2026-01-09 09:28:58] 2026-01-09 14:28:57,981 [wrapper] apfmon messages muted
[2026-01-09 09:28:58] 2026-01-09 14:28:57,985 [wrapper] ==== wrapper stdout END ====
[2026-01-09 09:28:58] 2026-01-09 14:28:57,986 [wrapper] ==== wrapper stderr END ====
[2026-01-09 09:28:58]  *** Error codes and diagnostics ***
[2026-01-09 09:28:58]     "exeErrorCode": 0,
[2026-01-09 09:28:58]     "exeErrorDiag": "",
[2026-01-09 09:28:58]     "pilotErrorCode": 0,
[2026-01-09 09:28:58]     "pilotErrorDiag": "",
[2026-01-09 09:28:58]  *** Listing of results directory ***
[2026-01-09 09:28:58] total 446280
[2026-01-09 09:28:58] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 10:02 pilot3.tar.gz
[2026-01-09 09:28:58] -rwx------. 1 boincer umatlas     36322 Jan  8 10:05 runpilot2-wrapper.sh
[2026-01-09 09:28:58] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 10:06 queuedata.json
[2026-01-09 09:28:58] -rw-r--r--. 1 boincer umatlas       100 Jan  9 04:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 09:28:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 04:22 run_atlas
[2026-01-09 09:28:58] -rw-r--r--. 1 boincer umatlas       105 Jan  9 04:22 job.xml
[2026-01-09 09:28:58] -rw-r--r--. 2 boincer umatlas 225947814 Jan  9 04:22 EVNT.47898824._001040.pool.root.1
[2026-01-09 09:28:58] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 04:22 start_atlas.sh
[2026-01-09 09:28:58] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 04:22 shared
[2026-01-09 09:28:58] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 04:22 input.tar.gz
[2026-01-09 09:28:58] -rw-r--r--. 1 boincer umatlas         0 Jan  9 04:22 boinc_lockfile
[2026-01-09 09:28:58] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 04:22 pandaJob.out
[2026-01-09 09:28:58] -rw-------. 1 boincer umatlas        57 Jan  9 04:22 setup.sh.local
[2026-01-09 09:28:58] -rw-------. 1 boincer umatlas    989751 Jan  9 04:23 agis_schedconf.cvmfs.json
[2026-01-09 09:28:58] drwx------. 5 boincer umatlas      4096 Jan  9 04:23 pilot3
[2026-01-09 09:28:58] -rw-------. 1 boincer umatlas 221344348 Jan  9 09:27 HITS.47898826._025948.pool.root.1
[2026-01-09 09:28:58] -rw-r--r--. 1 boincer umatlas       530 Jan  9 09:27 boinc_task_state.xml
[2026-01-09 09:28:58] -rw-r--r--. 1 boincer umatlas      6903 Jan  9 09:27 init_data.xml
[2026-01-09 09:28:58] -rw-------. 1 boincer umatlas      1034 Jan  9 09:27 memory_monitor_summary.json
[2026-01-09 09:28:58] -rw-------. 1 boincer umatlas   1516240 Jan  9 09:27 agis_ddmendpoints.agis.ALL.json
[2026-01-09 09:28:58] -rw-------. 1 boincer umatlas    502448 Jan  9 09:27 log.47898826._025948.job.log.tgz.1
[2026-01-09 09:28:58] -rw-------. 1 boincer umatlas      7781 Jan  9 09:27 heartbeat.json
[2026-01-09 09:28:58] -rw-------. 1 boincer umatlas        95 Jan  9 09:28 pilot_heartbeat.json
[2026-01-09 09:28:58] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 09:28 boinc_mmap_file
[2026-01-09 09:28:58] -rw-------. 1 boincer umatlas      4896 Jan  9 09:28 pilotlog.txt
[2026-01-09 09:28:58] -rw-r--r--. 1 boincer umatlas        28 Jan  9 09:28 wrapper_checkpoint.txt
[2026-01-09 09:28:58] -rw-------. 1 boincer umatlas   2395349 Jan  9 09:28 log.47898826._025948.job.log.1
[2026-01-09 09:28:58] -rw-------. 1 boincer umatlas       357 Jan  9 09:28 output.list
[2026-01-09 09:28:58] -rw-r--r--. 1 boincer umatlas       620 Jan  9 09:28 runtime_log
[2026-01-09 09:28:58] -rw-------. 1 boincer umatlas   2918400 Jan  9 09:28 result.tar.gz
[2026-01-09 09:28:58] -rw-------. 1 boincer umatlas       656 Jan  9 09:28 VaLNDm0k6x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSjkKDmfJVQGn.diag
[2026-01-09 09:28:58] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 09:28 runtime_log.err
[2026-01-09 09:28:58] -rw-r--r--. 1 boincer umatlas      2145 Jan  9 09:28 stderr.txt
[2026-01-09 09:28:58] HITS file was successfully produced:
[2026-01-09 09:28:58] -rw-------. 1 boincer umatlas 221344348 Jan  9 09:27 shared/HITS.pool.root.1
[2026-01-09 09:28:58]  *** Contents of shared directory: ***
[2026-01-09 09:28:58] total 440272
[2026-01-09 09:28:58] -rw-r--r--. 2 boincer umatlas 225947814 Jan  9 04:22 ATLAS.root_0
[2026-01-09 09:28:58] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 04:22 start_atlas.sh
[2026-01-09 09:28:58] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 04:22 input.tar.gz
[2026-01-09 09:28:58] -rw-------. 1 boincer umatlas 221344348 Jan  9 09:27 HITS.pool.root.1
[2026-01-09 09:28:58] -rw-------. 1 boincer umatlas   2918400 Jan  9 09:28 result.tar.gz
09:29:20 (3826010): run_atlas exited; CPU time 46926.083097
09:29:20 (3826010): called boinc_finish(0)

</stderr_txt>
]]>

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