Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:42:40 (914840): wrapper (7.7.26015): starting
00:42:40 (914840): wrapper: running run_atlas (--nthreads 4)
[2026-01-10 00:42:40] Arguments: --nthreads 4
[2026-01-10 00:42:40] Threads: 4
[2026-01-10 00:42:40] Checking for CVMFS
[2026-01-10 00:42:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 00:42:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 00:42:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 00:42:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 00:42:40] 2.9.2.0 172682 2779 91792 154961 2 57 22547081 36864001 0 130560 0 1883316 99.988 105825 5489 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 00:42:40] CVMFS is ok
[2026-01-10 00:42:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 00:42:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 00:42:40] Further information can be found at the LHC@home message board.
[2026-01-10 00:42:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 00:42:40] Checking for apptainer binary...
[2026-01-10 00:42:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 00:42:40] Running /usr/bin/apptainer --version
[2026-01-10 00:42:40] apptainer version 1.4.1-1.1
[2026-01-10 00:42:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 00:42:40] thA314a
[2026-01-10 00:42:40] apptainer works
[2026-01-10 00:42:40] Set ATHENA_PROC_NUMBER=4
[2026-01-10 00:42:40] Set ATHENA_CORE_NUMBER=4
[2026-01-10 00:42:40] Starting ATLAS job with PandaID=6963156472
[2026-01-10 00:42:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 02:25:02]  *** The last 200 lines of the pilot log: ***
[2026-01-10 02:25:02] 2026-01-10 01:24:31,685 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 02:25:02] 2026-01-10 01:24:31,685 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 02:25:02] 2026-01-10 01:24:31,687 | INFO     | did not find any defunct processes belonging to 925221
[2026-01-10 02:25:02] 2026-01-10 01:24:31,689 | INFO     | did not find any defunct processes belonging to 925221
[2026-01-10 02:25:02] 2026-01-10 01:24:31,689 | INFO     | ready for new job
[2026-01-10 02:25:02] 2026-01-10 01:24:31,689 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 02:25:02] 2026-01-10 01:24:31,689 | INFO     | ***************************************
[2026-01-10 02:25:02] 2026-01-10 01:24:31,689 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 02:25:02] 2026-01-10 01:24:31,689 | INFO     | ***************************************
[2026-01-10 02:25:02] 2026-01-10 01:24:31,690 | INFO     | 
[2026-01-10 02:25:02] 2026-01-10 01:24:31,690 | INFO     | architecture information:
[2026-01-10 02:25:02] 2026-01-10 01:24:31,690 | INFO     | executing command: cat /etc/os-release
[2026-01-10 02:25:02] 2026-01-10 01:24:31,704 | INFO     | cat /etc/os-release:
[2026-01-10 02:25:02] NAME="CentOS Linux"
[2026-01-10 02:25:02] VERSION="7 (Core)"
[2026-01-10 02:25:02] ID="centos"
[2026-01-10 02:25:02] ID_LIKE="rhel fedora"
[2026-01-10 02:25:02] VERSION_ID="7"
[2026-01-10 02:25:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 02:25:02] ANSI_COLOR="0;31"
[2026-01-10 02:25:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 02:25:02] HOME_URL="https://www.centos.org/"
[2026-01-10 02:25:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 02:25:02] 
[2026-01-10 02:25:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 02:25:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 02:25:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 02:25:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 02:25:02] 
[2026-01-10 02:25:02] 2026-01-10 01:24:31,704 | INFO     | ***************************************
[2026-01-10 02:25:02] 2026-01-10 01:24:32,207 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-10 02:25:02] 2026-01-10 01:24:32,225 | INFO     | sufficient remaining disk space (236649971712 B)
[2026-01-10 02:25:02] 2026-01-10 01:24:32,225 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 02:25:02] 2026-01-10 01:24:32,226 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 02:25:02] 2026-01-10 01:24:32,226 | INFO     | update_server=False
[2026-01-10 02:25:02] 2026-01-10 01:24:32,226 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 02:25:02] 2026-01-10 01:24:32,226 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 02:25:02] 2026-01-10 01:24:32,226 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 02:25:02] 2026-01-10 01:24:32,226 | INFO     | aborting loop
[2026-01-10 02:25:02] 2026-01-10 01:24:32,522 | INFO     | all job control threads have been joined
[2026-01-10 02:25:02] 2026-01-10 01:24:32,636 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 02:25:02] 2026-01-10 01:24:32,779 | INFO     | all data control threads have been joined
[2026-01-10 02:25:02] 2026-01-10 01:24:33,001 | INFO     | all payload control threads have been joined
[2026-01-10 02:25:02] 2026-01-10 01:24:33,231 | INFO     | [job] retrieve thread has finished
[2026-01-10 02:25:02] 2026-01-10 01:24:33,232 | INFO     | [job] queue monitor thread has finished
[2026-01-10 02:25:02] 2026-01-10 01:24:33,232 | INFO     | [job] job monitor thread has finished
[2026-01-10 02:25:02] 2026-01-10 01:24:33,244 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 02:25:02] 2026-01-10 01:24:33,272 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 02:25:02] 2026-01-10 01:24:33,528 | INFO     | [job] control thread has finished
[2026-01-10 02:25:02] 2026-01-10 01:24:33,563 | INFO     | [data] copytool_in thread has finished
[2026-01-10 02:25:02] 2026-01-10 01:24:33,649 | INFO     | [payload] failed_post thread has finished
[2026-01-10 02:25:02] 2026-01-10 01:24:33,785 | INFO     | [data] control thread has finished
[2026-01-10 02:25:02] 2026-01-10 01:24:34,007 | INFO     | [payload] control thread has finished
[2026-01-10 02:25:02] 2026-01-10 01:24:34,154 | INFO     | [payload] validate_post thread has finished
[2026-01-10 02:25:02] 2026-01-10 01:24:34,542 | INFO     | [job] validate thread has finished
[2026-01-10 02:25:02] 2026-01-10 01:24:34,642 | INFO     | [data] copytool_out thread has finished
[2026-01-10 02:25:02] 2026-01-10 01:24:34,648 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 02:25:02] 2026-01-10 01:24:34,657 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 02:25:02] 2026-01-10 01:24:37,279 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 02:25:02] 2026-01-10 01:24:42,394 | INFO     | job.realtimelogging is not enabled
[2026-01-10 02:25:02] 2026-01-10 01:24:43,400 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 02:25:02] 2026-01-10 01:24:55,888 | INFO     | [monitor] cgroup control has ended
[2026-01-10 02:25:02] 2026-01-10 01:24:56,895 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140718318065472)>', '<ExcThread(monitor, started 140717523449600)>']
[2026-01-10 02:25:02] 2026-01-10 01:25:01,920 | INFO     | all workflow threads have been joined
[2026-01-10 02:25:02] 2026-01-10 01:25:01,921 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 02:25:02] 2026-01-10 01:25:01,921 | INFO     | traces error code: 0
[2026-01-10 02:25:02] 2026-01-10 01:25:01,921 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 02:25:02] 2026-01-10 01:25:02,710 | INFO     | PID=918636 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 02:25:02] 2026-01-10 01:25:02,711 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 02:25:02] 2026-01-10 01:25:02,711 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 02:25:02] 2026-01-10 01:25:02,711 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 02:25:02] 2026-01-10 01:25:02,711 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 02:25:02] 2026-01-10 01:25:02,711 | INFO     | [monitor] control thread has ended
[2026-01-10 02:25:02] 2026-01-10 01:25:02,777 [wrapper] ==== pilot stdout END ====
[2026-01-10 02:25:02] 2026-01-10 01:25:02,781 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 02:25:02] 2026-01-10 01:25:02,785 [wrapper] pilotpid: 918636
[2026-01-10 02:25:02] 2026-01-10 01:25:02,788 [wrapper] Pilot exit status: 0
[2026-01-10 02:25:02] 2026-01-10 01:25:02,800 [wrapper] pandaids: 6963156472
[2026-01-10 02:25:02] 2026-01-10 01:25:02,822 [wrapper] cleanup supervisor_pilot  938119 918637
[2026-01-10 02:25:02] 2026-01-10 01:25:02,826 [wrapper] Test setup, not cleaning
[2026-01-10 02:25:02] 2026-01-10 01:25:02,830 [wrapper] apfmon messages muted
[2026-01-10 02:25:02] 2026-01-10 01:25:02,833 [wrapper] ==== wrapper stdout END ====
[2026-01-10 02:25:02] 2026-01-10 01:25:02,837 [wrapper] ==== wrapper stderr END ====
[2026-01-10 02:25:02]  *** Error codes and diagnostics ***
[2026-01-10 02:25:02]     "exeErrorCode": 0,
[2026-01-10 02:25:02]     "exeErrorDiag": "",
[2026-01-10 02:25:02]     "pilotErrorCode": 0,
[2026-01-10 02:25:02]     "pilotErrorDiag": "",
[2026-01-10 02:25:02]  *** Listing of results directory ***
[2026-01-10 02:25:02] total 440864
[2026-01-10 02:25:02] -rw-r--r-- 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-10 02:25:02] -rwx------ 1 boinc boinc     36322 Jan  8 20:10 runpilot2-wrapper.sh
[2026-01-10 02:25:02] -rw-r--r-- 1 boinc boinc      5112 Jan  8 20:11 queuedata.json
[2026-01-10 02:25:02] -rw-r--r-- 1 boinc boinc       100 Jan 10 00:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 02:25:02] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 00:42 run_atlas
[2026-01-10 02:25:02] -rw-r--r-- 1 boinc boinc       105 Jan 10 00:42 job.xml
[2026-01-10 02:25:02] -rw-r--r-- 2 boinc boinc 225222444 Jan 10 00:42 EVNT.47898824._000905.pool.root.1
[2026-01-10 02:25:02] -rw-r--r-- 2 boinc boinc    592398 Jan 10 00:42 input.tar.gz
[2026-01-10 02:25:02] drwxrwx--x 2 boinc boinc      4096 Jan 10 00:42 shared
[2026-01-10 02:25:02] -rw-r--r-- 2 boinc boinc     15847 Jan 10 00:42 start_atlas.sh
[2026-01-10 02:25:02] -rw-r--r-- 1 boinc boinc         0 Jan 10 00:42 boinc_setup_complete
[2026-01-10 02:25:02] -rw-r--r-- 1 boinc boinc      6371 Jan 10 00:42 init_data.xml
[2026-01-10 02:25:02] -rw-r--r-- 1 boinc boinc         0 Jan 10 00:42 boinc_lockfile
[2026-01-10 02:25:02] -rw-r--r-- 1 boinc boinc      2518 Jan 10 00:42 pandaJob.out
[2026-01-10 02:25:02] -rw------- 1 boinc boinc    989374 Jan 10 00:42 agis_schedconf.cvmfs.json
[2026-01-10 02:25:02] -rw------- 1 boinc boinc   1516240 Jan 10 00:42 agis_ddmendpoints.agis.ALL.json
[2026-01-10 02:25:02] drwx------ 5 boinc boinc      4096 Jan 10 00:42 pilot3
[2026-01-10 02:25:02] -rw------- 1 boinc boinc 219963286 Jan 10 02:24 HITS.47898826._031642.pool.root.1
[2026-01-10 02:25:02] -rw-r--r-- 1 boinc boinc       530 Jan 10 02:24 boinc_task_state.xml
[2026-01-10 02:25:02] -rw------- 1 boinc boinc        95 Jan 10 02:24 pilot_heartbeat.json
[2026-01-10 02:25:02] -rw------- 1 boinc boinc      1017 Jan 10 02:24 memory_monitor_summary.json
[2026-01-10 02:25:02] -rw------- 1 boinc boinc    295723 Jan 10 02:24 log.47898826._031642.job.log.tgz.1
[2026-01-10 02:25:02] -rw------- 1 boinc boinc      7764 Jan 10 02:24 heartbeat.json
[2026-01-10 02:25:02] -rw-r--r-- 1 boinc boinc      8192 Jan 10 02:24 boinc_mmap_file
[2026-01-10 02:25:02] -rw-r--r-- 1 boinc boinc        27 Jan 10 02:24 wrapper_checkpoint.txt
[2026-01-10 02:25:02] -rw------- 1 boinc boinc       746 Jan 10 02:25 pilotlog.txt
[2026-01-10 02:25:02] -rw------- 1 boinc boinc    884991 Jan 10 02:25 log.47898826._031642.job.log.1
[2026-01-10 02:25:02] -rw------- 1 boinc boinc       357 Jan 10 02:25 output.list
[2026-01-10 02:25:02] -rw-r--r-- 1 boinc boinc       620 Jan 10 02:25 runtime_log
[2026-01-10 02:25:02] -rw------- 1 boinc boinc   1198080 Jan 10 02:25 result.tar.gz
[2026-01-10 02:25:02] -rw-r--r-- 1 boinc boinc      8902 Jan 10 02:25 runtime_log.err
[2026-01-10 02:25:02] -rw------- 1 boinc boinc       660 Jan 10 02:25 rXBODmvZAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJNlKDmtXwHen.diag
[2026-01-10 02:25:02] -rw-r--r-- 1 boinc boinc     10058 Jan 10 02:25 stderr.txt
[2026-01-10 02:25:02] HITS file was successfully produced:
[2026-01-10 02:25:02] -rw------- 1 boinc boinc 219963286 Jan 10 02:24 shared/HITS.pool.root.1
[2026-01-10 02:25:02]  *** Contents of shared directory: ***
[2026-01-10 02:25:02] total 436528
[2026-01-10 02:25:02] -rw-r--r-- 2 boinc boinc 225222444 Jan 10 00:42 ATLAS.root_0
[2026-01-10 02:25:02] -rw-r--r-- 2 boinc boinc    592398 Jan 10 00:42 input.tar.gz
[2026-01-10 02:25:02] -rw-r--r-- 2 boinc boinc     15847 Jan 10 00:42 start_atlas.sh
[2026-01-10 02:25:02] -rw------- 1 boinc boinc 219963286 Jan 10 02:24 HITS.pool.root.1
[2026-01-10 02:25:02] -rw------- 1 boinc boinc   1198080 Jan 10 02:25 result.tar.gz
02:25:04 (914840): run_atlas exited; CPU time 23341.018739
02:25:04 (914840): called boinc_finish(0)

</stderr_txt>
]]>

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