Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:52:54 (33446): wrapper (7.7.26015): starting
14:52:54 (33446): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 14:52:54] Arguments: --nthreads 12
[2026-01-09 14:52:54] Threads: 12
[2026-01-09 14:52:54] Checking for CVMFS
[2026-01-09 14:52:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:52:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:52:54] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:52:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:52:54] 2.13.3.0 2429250 21314 294296 154945 2 188 30357666 46080000 6410 130560 0 107640285 99.877 38731006 23215 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-09 14:52:54] CVMFS is ok
[2026-01-09 14:52:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 14:52:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 14:52:54] Further information can be found at the LHC@home message board.
[2026-01-09 14:52:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:52:54] Checking for apptainer binary...
[2026-01-09 14:52:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:52:54] Running /usr/bin/apptainer --version
[2026-01-09 14:52:54] apptainer version 1.4.5-2.el9
[2026-01-09 14:52:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:52:55] mff2103.farm.particle.cz
[2026-01-09 14:52:55] apptainer works
[2026-01-09 14:52:55] Set ATHENA_PROC_NUMBER=12
[2026-01-09 14:52:55] Set ATHENA_CORE_NUMBER=12
[2026-01-09 14:52:55] Starting ATLAS job with PandaID=6963145589
[2026-01-09 14:52:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:11:18]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:11:18]  status=None
[2026-01-09 16:11:18]  status_code=0
[2026-01-09 16:11:18]  storage_token=
[2026-01-09 16:11:18]  surl=/scratch/.boinc/slots/5/PanDA_Pilot-6963145589/log.47898826._026272.job.log.tgz.1
[2026-01-09 16:11:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6a/ea/log.47898826._026272.job.log.tgz.1
[2026-01-09 16:11:18]  workdir=None
[2026-01-09 16:11:18] ]
[2026-01-09 16:11:18] 2026-01-09 15:10:26,551 | INFO     | transferring file log.47898826._026272.job.log.tgz.1 from /scratch/.boinc/slots/5/PanDA_Pilot-6963145589/log.47898826._026272.job.log.tgz.1 to /scratch/.boinc/slot
[2026-01-09 16:11:18] 2026-01-09 15:10:26,551 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/5/PanDA_Pilot-6963145589/log.47898826._026272.job.log.tgz.1 /scratch/.boinc/slots/5/log.47898826._026272.j
[2026-01-09 16:11:18] 2026-01-09 15:10:26,577 | INFO     | adding to output.list: log.47898826._026272.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6a/ea/log.47898826._026272.job.log.tg
[2026-01-09 16:11:18] 2026-01-09 15:10:26,577 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 16:11:18] 2026-01-09 15:10:26,578 | INFO     | summary of transferred files:
[2026-01-09 16:11:18] 2026-01-09 15:10:26,578 | INFO     |  -- lfn=log.47898826._026272.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 16:11:18] 2026-01-09 15:10:26,578 | INFO     | stage-out finished correctly
[2026-01-09 16:11:18] 2026-01-09 15:10:26,942 | INFO     | time since job start (4640s) is within the limit (349056.0s)
[2026-01-09 16:11:18] 2026-01-09 15:10:26,962 | INFO     | monitor loop #332: job 0:6963145589 is in state 'finished'
[2026-01-09 16:11:18] 2026-01-09 15:10:26,963 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:11:18] 2026-01-09 15:10:28,948 | INFO     | time since job start (4642s) is within the limit (349056.0s)
[2026-01-09 16:11:18] 2026-01-09 15:10:29,466 | INFO     | monitor loop #333: job 0:6963145589 is in state 'finished'
[2026-01-09 16:11:18] 2026-01-09 15:10:29,466 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:11:18] 2026-01-09 15:10:29,688 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 16:11:18] 2026-01-09 15:10:29,776 | INFO     | job 6963145589 has state=finished
[2026-01-09 16:11:18] 2026-01-09 15:10:29,776 | INFO     | preparing for final server update for job 6963145589 in state='finished'
[2026-01-09 16:11:18] 2026-01-09 15:10:29,777 | INFO     | this job has now completed (state=finished)
[2026-01-09 16:11:18] 2026-01-09 15:10:29,777 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 16:11:18] 2026-01-09 15:10:29,777 | INFO     | log transfer has been attempted: DONE
[2026-01-09 16:11:18] 2026-01-09 15:10:29,777 | INFO     | job 6963145589 has finished - writing final server update
[2026-01-09 16:11:18] 2026-01-09 15:10:29,777 | INFO     | total number of processed events: 400 (read)
[2026-01-09 16:11:18] 2026-01-09 15:10:29,778 | INFO     | executing command: lscpu
[2026-01-09 16:11:18] 2026-01-09 15:10:29,845 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 16:11:18] 2026-01-09 15:10:30,956 | INFO     | time since job start (4644s) is within the limit (349056.0s)
[2026-01-09 16:11:18] 2026-01-09 15:10:31,970 | INFO     | monitor loop #334: job 0:6963145589 is in state 'finished'
[2026-01-09 16:11:18] 2026-01-09 15:10:31,970 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:11:18] 2026-01-09 15:10:32,962 | INFO     | time since job start (4646s) is within the limit (349056.0s)
[2026-01-09 16:11:18] 2026-01-09 15:10:34,474 | INFO     | monitor loop #335: job 0:6963145589 is in state 'finished'
[2026-01-09 16:11:18] 2026-01-09 15:10:34,475 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 16:11:18] 2026-01-09 15:10:34,962 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 16:11:18] 2026-01-09 15:10:34,967 | INFO     | time since job start (4648s) is within the limit (349056.0s)
[2026-01-09 16:11:18] 2026-01-09 15:10:34,974 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2751.584927083333
[2026-01-09 16:11:18] 2026-01-09 15:10:34,988 | INFO     | using path: /scratch/.boinc/slots/5/PanDA_Pilot-6963145589/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:11:18] 2026-01-09 15:10:34,988 | INFO     | extracted standard info from prmon json
[2026-01-09 16:11:18] 2026-01-09 15:10:34,989 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 16:11:18] 2026-01-09 15:10:34,989 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 16:11:18] 2026-01-09 15:10:34,989 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 16:11:18] 2026-01-09 15:10:34,989 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 16:11:18] 2026-01-09 15:10:34,990 | INFO     | fitting pss+swap vs Time
[2026-01-09 16:11:18] 2026-01-09 15:10:34,991 | INFO     | sum of square deviations: 101843770.0
[2026-01-09 16:11:18] 2026-01-09 15:10:34,991 | INFO     | sum of deviations: -67383100.99999972
[2026-01-09 16:11:18] 2026-01-09 15:10:34,991 | INFO     | mean x: 1767969195.0
[2026-01-09 16:11:18] 2026-01-09 15:10:34,991 | INFO     | mean y: 2699021.4057971016
[2026-01-09 16:11:18] 2026-01-09 15:10:34,991 | INFO     | intersect: 1172444081.231972
[2026-01-09 16:11:18] 2026-01-09 15:10:34,991 | INFO     | chi2: 0.011899603899596276
[2026-01-09 16:11:18] 2026-01-09 15:10:34,991 | INFO     | current memory leak: -0.66 B/s (using 69 data points, chi2=0.01)
[2026-01-09 16:11:18] 2026-01-09 15:10:34,992 | INFO     | could have reported an average CPU frequency of 2747 MHz (6 samples)
[2026-01-09 16:11:18] 2026-01-09 15:10:34,992 | INFO     | ..............................
[2026-01-09 16:11:18] 2026-01-09 15:10:34,992 | INFO     | . Timing measurements:
[2026-01-09 16:11:18] 2026-01-09 15:10:34,992 | INFO     | . get job = 0 s
[2026-01-09 16:11:18] 2026-01-09 15:10:34,992 | INFO     | . initial setup = 1 s
[2026-01-09 16:11:18] 2026-01-09 15:10:34,992 | INFO     | . payload setup = 7 s
[2026-01-09 16:11:18] 2026-01-09 15:10:34,992 | INFO     | . stage-in = 0 s
[2026-01-09 16:11:18] 2026-01-09 15:10:34,992 | INFO     | . payload execution = 4610 s
[2026-01-09 16:11:18] 2026-01-09 15:10:34,992 | INFO     | . stage-out = 0 s
[2026-01-09 16:11:18] 2026-01-09 15:10:34,992 | INFO     | . log creation = 0 s
[2026-01-09 16:11:18] 2026-01-09 15:10:34,992 | INFO     | ..............................
[2026-01-09 16:11:18] 2026-01-09 15:10:35,059 | INFO     | 
[2026-01-09 16:11:18] 2026-01-09 15:10:35,059 | INFO     | job summary report
[2026-01-09 16:11:18] 2026-01-09 15:10:35,059 | INFO     | --------------------------------------------------
[2026-01-09 16:11:18] 2026-01-09 15:10:35,059 | INFO     | PanDA job id: 6963145589
[2026-01-09 16:11:18] 2026-01-09 15:10:35,060 | INFO     | task id: 47898826
[2026-01-09 16:11:18] 2026-01-09 15:10:35,060 | INFO     | errors: (none)
[2026-01-09 16:11:18] 2026-01-09 15:10:35,060 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 16:11:18] 2026-01-09 15:10:35,060 | INFO     | pilot state: finished 
[2026-01-09 16:11:18] 2026-01-09 15:10:35,060 | INFO     | transexitcode: 0
[2026-01-09 16:11:18] 2026-01-09 15:10:35,060 | INFO     | exeerrorcode: 0
[2026-01-09 16:11:18] 2026-01-09 15:10:35,060 | INFO     | exeerrordiag: 
[2026-01-09 16:11:18] 2026-01-09 15:10:35,060 | INFO     | exitcode: 0
[2026-01-09 16:11:18] 2026-01-09 15:10:35,060 | INFO     | exitmsg: OK
[2026-01-09 16:11:18] 2026-01-09 15:10:35,060 | INFO     | cpuconsumptiontime: 49879 s
[2026-01-09 16:11:18] 2026-01-09 15:10:35,060 | INFO     | nevents: 400
[2026-01-09 16:11:18] 2026-01-09 15:10:35,060 | INFO     | neventsw: 0
[2026-01-09 16:11:18] 2026-01-09 15:10:35,061 | INFO     | pid: 44639
[2026-01-09 16:11:18] 2026-01-09 15:10:35,061 | INFO     | pgrp: 44639
[2026-01-09 16:11:18] 2026-01-09 15:10:35,061 | INFO     | corecount: 12
[2026-01-09 16:11:18] 2026-01-09 15:10:35,061 | INFO     | event service: False
[2026-01-09 16:11:18] 2026-01-09 15:10:35,061 | INFO     | sizes: {0: 2283799, 1: 2283998, 7: 2284260, 12: 2284288, 4621: 2310536, 4624: 2319536, 4627: 2319720, 4632: 2319914}
[2026-01-09 16:11:18] 2026-01-09 15:10:35,061 | INFO     | --------------------------------------------------
[2026-01-09 16:11:18] 2026-01-09 15:10:35,061 | INFO     | 
[2026-01-09 16:11:18] 2026-01-09 15:10:35,061 | INFO     | executing command: ls -lF /scratch/.boinc/slots/5
[2026-01-09 16:11:18] 2026-01-09 15:10:35,083 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 16:11:18] 2026-01-09 15:10:35,084 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 16:11:18] 2026-01-09 15:10:35,084 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 16:11:18] 2026-01-09 15:10:35,084 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 16:11:18] 2026-01-09 15:10:35,084 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 16:11:18] 2026-01-09 15:10:35,084 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 16:11:18] 2026-01-09 15:10:35,084 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 16:11:18] 2026-01-09 15:10:35,084 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 16:11:18] 2026-01-09 15:10:35,085 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 16:11:18] 2026-01-09 15:10:35,085 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 16:11:18] 2026-01-09 15:10:35,085 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 16:11:18] 2026-01-09 15:10:35,085 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 16:11:18] 2026-01-09 15:10:35,085 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 16:11:18] 2026-01-09 15:10:35,085 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 16:11:18] 2026-01-09 15:10:35,085 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 16:11:18] 2026-01-09 15:10:35,085 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 16:11:18] 2026-01-09 15:10:35,085 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 16:11:18] 2026-01-09 15:10:35,085 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 16:11:18] 2026-01-09 15:10:35,085 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 16:11:18] 2026-01-09 15:10:35,085 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 16:11:18] 2026-01-09 15:10:35,086 | INFO     | job 6963145589 has completed (purged errors)
[2026-01-09 16:11:18] 2026-01-09 15:10:35,086 | INFO     | overall cleanup function is called
[2026-01-09 16:11:18] 2026-01-09 15:10:36,095 | INFO     | --- collectZombieJob: --- 10, [44639]
[2026-01-09 16:11:18] 2026-01-09 15:10:36,096 | INFO     | zombie collector waiting for pid 44639
[2026-01-09 16:11:18] 2026-01-09 15:10:36,096 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 16:11:18] 2026-01-09 15:10:36,096 | INFO     | collected zombie processes
[2026-01-09 16:11:18] 2026-01-09 15:10:36,096 | INFO     | will attempt to kill all subprocesses of pid=44639
[2026-01-09 16:11:18] 2026-01-09 15:10:36,611 | INFO     | PID=37547 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 16:11:18] 2026-01-09 15:10:36,611 | INFO     | .. there are 8 such processes running
[2026-01-09 16:11:18] 2026-01-09 15:10:36,658 | INFO     | process IDs to be killed: [44639] (in reverse order)
[2026-01-09 16:11:18] 2026-01-09 15:10:36,771 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 16:11:18] 2026-01-09 15:10:36,771 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 16:11:18] 2026-01-09 15:10:36,784 | INFO     | did not find any defunct processes belonging to 44639
[2026-01-09 16:11:18] 2026-01-09 15:10:36,794 | INFO     | did not find any defunct processes belonging to 44639
[2026-01-09 16:11:18] 2026-01-09 15:10:36,795 | INFO     | ready for new job
[2026-01-09 16:11:18] 2026-01-09 15:10:36,795 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 16:11:18] 2026-01-09 15:10:36,797 | INFO     | ***************************************
[2026-01-09 16:11:18] 2026-01-09 15:10:36,797 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 16:11:18] 2026-01-09 15:10:36,797 | INFO     | ***************************************
[2026-01-09 16:11:18] 2026-01-09 15:10:36,797 | INFO     | 
[2026-01-09 16:11:18] 2026-01-09 15:10:36,803 | INFO     | architecture information:
[2026-01-09 16:11:18] 2026-01-09 15:10:36,803 | INFO     | executing command: cat /etc/os-release
[2026-01-09 16:11:18] 2026-01-09 15:10:36,824 | INFO     | cat /etc/os-release:
[2026-01-09 16:11:18] NAME="CentOS Linux"
[2026-01-09 16:11:18] VERSION="7 (Core)"
[2026-01-09 16:11:18] ID="centos"
[2026-01-09 16:11:18] ID_LIKE="rhel fedora"
[2026-01-09 16:11:18] VERSION_ID="7"
[2026-01-09 16:11:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:11:18] ANSI_COLOR="0;31"
[2026-01-09 16:11:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:11:18] HOME_URL="https://www.centos.org/"
[2026-01-09 16:11:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:11:18] 
[2026-01-09 16:11:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:11:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:11:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:11:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:11:18] 
[2026-01-09 16:11:18] 2026-01-09 15:10:36,824 | INFO     | ***************************************
[2026-01-09 16:11:18] 2026-01-09 15:10:37,327 | INFO     | executing command: df -mP /scratch/.boinc/slots/5
[2026-01-09 16:11:18] 2026-01-09 15:10:37,347 | INFO     | sufficient remaining disk space (1680142761984 B)
[2026-01-09 16:11:18] 2026-01-09 15:10:37,348 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:11:18] 2026-01-09 15:10:37,348 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:11:18] 2026-01-09 15:10:37,348 | INFO     | update_server=False
[2026-01-09 16:11:18] 2026-01-09 15:10:37,348 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:11:18] 2026-01-09 15:10:37,349 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:11:18] 2026-01-09 15:10:37,349 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 16:11:18] 2026-01-09 15:10:37,350 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:11:18] 2026-01-09 15:10:37,350 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:11:18] 2026-01-09 15:10:37,350 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:11:18] 2026-01-09 15:10:37,413 | INFO     | all data control threads have been joined
[2026-01-09 16:11:18] 2026-01-09 15:10:37,613 | INFO     | all job control threads have been joined
[2026-01-09 16:11:18] 2026-01-09 15:10:37,982 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:11:18] 2026-01-09 15:10:37,983 | INFO     | aborting loop
[2026-01-09 16:11:18] 2026-01-09 15:10:38,003 | INFO     | all payload control threads have been joined
[2026-01-09 16:11:18] 2026-01-09 15:10:38,354 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:11:18] 2026-01-09 15:10:38,401 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:11:18] 2026-01-09 15:10:38,416 | INFO     | [data] control thread has finished
[2026-01-09 16:11:18] 2026-01-09 15:10:38,423 | INFO     | [job] validate thread has finished
[2026-01-09 16:11:18] 2026-01-09 15:10:38,618 | INFO     | [job] control thread has finished
[2026-01-09 16:11:18] 2026-01-09 15:10:38,637 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:11:18] 2026-01-09 15:10:38,894 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:11:18] 2026-01-09 15:10:38,984 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:11:18] 2026-01-09 15:10:38,988 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:11:18] 2026-01-09 15:10:39,009 | INFO     | [payload] control thread has finished
[2026-01-09 16:11:18] 2026-01-09 15:10:39,180 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:11:18] 2026-01-09 15:10:39,187 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:11:18] 2026-01-09 15:10:39,355 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:11:18] 2026-01-09 15:10:39,787 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:11:18] 2026-01-09 15:10:40,068 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:11:18] 2026-01-09 15:10:40,284 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:11:18] 2026-01-09 15:10:41,075 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:11:18] 2026-01-09 15:10:44,289 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:11:18] 2026-01-09 15:11:13,096 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:11:18] 2026-01-09 15:11:13,266 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140706466400064)>', '<ExcThread(monitor, started 140706114942720)>']
[2026-01-09 16:11:18] 2026-01-09 15:11:13,525 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:11:18] 2026-01-09 15:11:13,526 | INFO     | [monitor] control thread has ended
[2026-01-09 16:11:18] 2026-01-09 15:11:18,291 | INFO     | all workflow threads have been joined
[2026-01-09 16:11:18] 2026-01-09 15:11:18,292 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:11:18] 2026-01-09 15:11:18,292 | INFO     | traces error code: 0
[2026-01-09 16:11:18] 2026-01-09 15:11:18,292 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:11:18] 2026-01-09 15:11:18,427 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:11:18] 2026-01-09 15:11:18,430 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:11:18] 2026-01-09 15:11:18,433 [wrapper] pilotpid: 37547
[2026-01-09 16:11:18] 2026-01-09 15:11:18,435 [wrapper] Pilot exit status: 0
[2026-01-09 16:11:18] 2026-01-09 15:11:18,447 [wrapper] pandaids: 6963145589
[2026-01-09 16:11:18] 2026-01-09 15:11:18,509 [wrapper] cleanup supervisor_pilot  241201 37548
[2026-01-09 16:11:18] 2026-01-09 15:11:18,513 [wrapper] Test setup, not cleaning
[2026-01-09 16:11:18] 2026-01-09 15:11:18,516 [wrapper] apfmon messages muted
[2026-01-09 16:11:18] 2026-01-09 15:11:18,520 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:11:18] 2026-01-09 15:11:18,523 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:11:18]  *** Error codes and diagnostics ***
[2026-01-09 16:11:18]     "exeErrorCode": 0,
[2026-01-09 16:11:18]     "exeErrorDiag": "",
[2026-01-09 16:11:18]     "pilotErrorCode": 0,
[2026-01-09 16:11:18]     "pilotErrorDiag": "",
[2026-01-09 16:11:18]  *** Listing of results directory ***
[2026-01-09 16:11:18] total 440940
[2026-01-09 16:11:18] -rw-r--r-- 1 boinc boinc      5112 Jan  8 16:02 queuedata.json
[2026-01-09 16:11:18] -rw-r--r-- 1 boinc boinc    579449 Jan  8 16:02 pilot3.tar.gz
[2026-01-09 16:11:18] -rwx------ 1 boinc boinc     36322 Jan  8 16:02 runpilot2-wrapper.sh
[2026-01-09 16:11:18] -rw-r--r-- 1 boinc boinc       100 Jan  9 14:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:11:18] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 14:52 run_atlas
[2026-01-09 16:11:18] -rw-r--r-- 1 boinc boinc       105 Jan  9 14:52 job.xml
[2026-01-09 16:11:18] -rw-r--r-- 1 boinc boinc      6674 Jan  9 14:52 init_data.xml
[2026-01-09 16:11:18] -rw-r--r-- 2 boinc boinc 225100515 Jan  9 14:52 EVNT.47898824._001018.pool.root.1
[2026-01-09 16:11:18] -rw-r--r-- 2 boinc boinc     15847 Jan  9 14:52 start_atlas.sh
[2026-01-09 16:11:18] drwxrwx--x 2 boinc boinc      4096 Jan  9 14:52 shared
[2026-01-09 16:11:18] -rw-r--r-- 2 boinc boinc    592399 Jan  9 14:52 input.tar.gz
[2026-01-09 16:11:18] -rw-r--r-- 1 boinc boinc         0 Jan  9 14:52 boinc_lockfile
[2026-01-09 16:11:18] -rw-r--r-- 1 boinc boinc      2519 Jan  9 14:52 pandaJob.out
[2026-01-09 16:11:18] -rw------- 1 boinc boinc    989377 Jan  9 14:53 agis_schedconf.cvmfs.json
[2026-01-09 16:11:18] -rw------- 1 boinc boinc   1516240 Jan  9 14:53 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:11:18] drwx------ 5 boinc boinc      4096 Jan  9 14:53 pilot3
[2026-01-09 16:11:18] -rw------- 1 boinc boinc 220412070 Jan  9 16:09 HITS.47898826._026272.pool.root.1
[2026-01-09 16:11:18] -rw-r--r-- 1 boinc boinc       529 Jan  9 16:09 boinc_task_state.xml
[2026-01-09 16:11:18] -rw------- 1 boinc boinc      1021 Jan  9 16:10 memory_monitor_summary.json
[2026-01-09 16:11:18] -rw------- 1 boinc boinc    375192 Jan  9 16:10 log.47898826._026272.job.log.tgz.1
[2026-01-09 16:11:18] -rw------- 1 boinc boinc        95 Jan  9 16:10 pilot_heartbeat.json
[2026-01-09 16:11:18] -rw------- 1 boinc boinc      7775 Jan  9 16:10 heartbeat.json
[2026-01-09 16:11:18] -rw-r--r-- 1 boinc boinc        27 Jan  9 16:11 wrapper_checkpoint.txt
[2026-01-09 16:11:18] -rw------- 1 boinc boinc      4555 Jan  9 16:11 pilotlog.txt
[2026-01-09 16:11:18] -rw------- 1 boinc boinc    672457 Jan  9 16:11 log.47898826._026272.job.log.1
[2026-01-09 16:11:18] -rw------- 1 boinc boinc       357 Jan  9 16:11 output.list
[2026-01-09 16:11:18] -rw-r--r-- 1 boinc boinc       620 Jan  9 16:11 runtime_log
[2026-01-09 16:11:18] -rw------- 1 boinc boinc   1064960 Jan  9 16:11 result.tar.gz
[2026-01-09 16:11:18] -rw-r--r-- 1 boinc boinc      8880 Jan  9 16:11 runtime_log.err
[2026-01-09 16:11:18] -rw------- 1 boinc boinc       663 Jan  9 16:11 5n9LDm5h6x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAdkKDmwnVnnm.diag
[2026-01-09 16:11:18] -rw-r--r-- 1 boinc boinc     22126 Jan  9 16:11 stderr.txt
[2026-01-09 16:11:18] -rw-r--r-- 1 boinc boinc      8192 Jan  9 16:11 boinc_mmap_file
[2026-01-09 16:11:18] HITS file was successfully produced:
[2026-01-09 16:11:18] -rw------- 1 boinc boinc 220412070 Jan  9 16:09 shared/HITS.pool.root.1
[2026-01-09 16:11:18]  *** Contents of shared directory: ***
[2026-01-09 16:11:18] total 436720
[2026-01-09 16:11:18] -rw-r--r-- 2 boinc boinc 225100515 Jan  9 14:52 ATLAS.root_0
[2026-01-09 16:11:18] -rw-r--r-- 2 boinc boinc     15847 Jan  9 14:52 start_atlas.sh
[2026-01-09 16:11:18] -rw-r--r-- 2 boinc boinc    592399 Jan  9 14:52 input.tar.gz
[2026-01-09 16:11:18] -rw------- 1 boinc boinc 220412070 Jan  9 16:09 HITS.pool.root.1
[2026-01-09 16:11:18] -rw------- 1 boinc boinc   1064960 Jan  9 16:11 result.tar.gz
16:11:20 (33446): run_atlas exited; CPU time 49977.798164
16:11:20 (33446): called boinc_finish(0)

</stderr_txt>
]]>

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