Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:12:57 (1925764): wrapper (7.7.26015): starting
07:12:57 (1925764): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 07:12:57] Arguments: --nthreads 8
[2026-01-09 07:12:57] Threads: 8
[2026-01-09 07:12:57] Checking for CVMFS
[2026-01-09 07:12:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 07:12:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 07:12:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 07:12:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 07:12:59] 2.13.3.0 9601 32664 243084 154942 1 96 25513772 32935937 13020 16776704 0 25805110 99.750 35455182 44010 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 07:12:59] CVMFS is ok
[2026-01-09 07:12:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 07:12:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 07:12:59] Further information can be found at the LHC@home message board.
[2026-01-09 07:12:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 07:12:59] Checking for apptainer binary...
[2026-01-09 07:12:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 07:12:59] Running /usr/bin/apptainer --version
[2026-01-09 07:12:59] apptainer version 1.4.5-2.el9
[2026-01-09 07:12:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 07:13:00] c6-5-7-2.aglt2.org
[2026-01-09 07:13:00] apptainer works
[2026-01-09 07:13:00] Set ATHENA_PROC_NUMBER=8
[2026-01-09 07:13:00] Set ATHENA_CORE_NUMBER=8
[2026-01-09 07:13:00] Starting ATLAS job with PandaID=6963146700
[2026-01-09 07:13:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:50:42]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:50:42] 2026-01-09 17:49:57,594 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:50:42] 2026-01-09 17:49:58,090 | INFO     | time since job start (20158s) is within the limit (349056.0s)
[2026-01-09 12:50:42] 2026-01-09 17:49:59,035 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 12:50:42] 2026-01-09 17:49:59,133 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3017.4779821428565
[2026-01-09 12:50:42] 2026-01-09 17:49:59,154 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963146700/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:50:42] 2026-01-09 17:49:59,155 | INFO     | extracted standard info from prmon json
[2026-01-09 12:50:42] 2026-01-09 17:49:59,155 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:50:42] 2026-01-09 17:49:59,155 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:50:42] 2026-01-09 17:49:59,156 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 12:50:42] 2026-01-09 17:49:59,156 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 12:50:42] 2026-01-09 17:49:59,165 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:50:42] 2026-01-09 17:49:59,166 | INFO     | sum of square deviations: 10942354680.87793
[2026-01-09 12:50:42] 2026-01-09 17:49:59,172 | INFO     | sum of deviations: -5194719825.878056
[2026-01-09 12:50:42] 2026-01-09 17:49:59,172 | INFO     | mean x: 1767970932.097561
[2026-01-09 12:50:42] 2026-01-09 17:49:59,172 | INFO     | mean y: 2517501.1524390243
[2026-01-09 12:50:42] 2026-01-09 17:49:59,173 | INFO     | intersect: 841835355.5254836
[2026-01-09 12:50:42] 2026-01-09 17:49:59,173 | INFO     | chi2: 2.4884433695896835
[2026-01-09 12:50:42] 2026-01-09 17:49:59,173 | INFO     | sum of square deviations: 10449525431.869936
[2026-01-09 12:50:42] 2026-01-09 17:49:59,180 | INFO     | sum of deviations: 15976052128.684229
[2026-01-09 12:50:42] 2026-01-09 17:49:59,180 | INFO     | mean x: 1767970779.5944273
[2026-01-09 12:50:42] 2026-01-09 17:49:59,180 | INFO     | mean y: 2523972.1578947366
[2026-01-09 12:50:42] 2026-01-09 17:49:59,180 | INFO     | intersect: -2700488094.84433
[2026-01-09 12:50:42] 2026-01-09 17:49:59,181 | INFO     | chi2: 1.7768787457725863
[2026-01-09 12:50:42] 2026-01-09 17:49:59,181 | INFO     | current chi2=1.7768787457725863 (change=28.594768621735856 %)
[2026-01-09 12:50:42] 2026-01-09 17:49:59,181 | INFO     | sum of square deviations: 9971739179.169813
[2026-01-09 12:50:42] 2026-01-09 17:49:59,187 | INFO     | sum of deviations: 15702103179.679266
[2026-01-09 12:50:42] 2026-01-09 17:49:59,188 | INFO     | mean x: 1767970627.0943396
[2026-01-09 12:50:42] 2026-01-09 17:49:59,188 | INFO     | mean y: 2523884.710691824
[2026-01-09 12:50:42] 2026-01-09 17:49:59,188 | INFO     | intersect: -2781429516.6445947
[2026-01-09 12:50:42] 2026-01-09 17:49:59,188 | INFO     | chi2: 1.7772169441970944
[2026-01-09 12:50:42] 2026-01-09 17:49:59,188 | INFO     | current chi2=1.7772169441970944 (change=-0.019033286616361576 %)
[2026-01-09 12:50:42] 2026-01-09 17:49:59,188 | INFO     | right removable region: 317
[2026-01-09 12:50:42] 2026-01-09 17:49:59,189 | INFO     | sum of square deviations: 10449485659.06497
[2026-01-09 12:50:42] 2026-01-09 17:49:59,191 | INFO     | sum of deviations: -59972051634.12999
[2026-01-09 12:50:42] 2026-01-09 17:49:59,191 | INFO     | mean x: 1767971084.606811
[2026-01-09 12:50:42] 2026-01-09 17:49:59,195 | INFO     | mean y: 2534337.786377709
[2026-01-09 12:50:42] 2026-01-09 17:49:59,196 | INFO     | intersect: 10149335494.617289
[2026-01-09 12:50:42] 2026-01-09 17:49:59,196 | INFO     | chi2: 0.8846395823169443
[2026-01-09 12:50:42] 2026-01-09 17:49:59,196 | INFO     | current chi2=0.8846395823169443 (change=64.4500818010252 %)
[2026-01-09 12:50:42] 2026-01-09 17:49:59,197 | INFO     | sum of square deviations: 9971659877.924559
[2026-01-09 12:50:42] 2026-01-09 17:49:59,199 | INFO     | sum of deviations: -46950083771.90564
[2026-01-09 12:50:42] 2026-01-09 17:49:59,199 | INFO     | mean x: 1767971237.1132076
[2026-01-09 12:50:42] 2026-01-09 17:49:59,199 | INFO     | mean y: 2530165.6918238993
[2026-01-09 12:50:42] 2026-01-09 17:49:59,199 | INFO     | intersect: 8326760906.107049
[2026-01-09 12:50:42] 2026-01-09 17:49:59,203 | INFO     | chi2: 0.8348154009533146
[2026-01-09 12:50:42] 2026-01-09 17:49:59,204 | INFO     | current chi2=0.8348154009533146 (change=5.63214470158977 %)
[2026-01-09 12:50:42] 2026-01-09 17:49:59,204 | INFO     | left removable region: 20
[2026-01-09 12:50:42] 2026-01-09 17:49:59,204 | INFO     | sum of square deviations: 8123667647.259276
[2026-01-09 12:50:42] 2026-01-09 17:49:59,206 | INFO     | sum of deviations: -4807690006.88889
[2026-01-09 12:50:42] 2026-01-09 17:49:59,206 | INFO     | mean x: 1767971206.6296296
[2026-01-09 12:50:42] 2026-01-09 17:49:59,206 | INFO     | mean y: 2529864.373737374
[2026-01-09 12:50:42] 2026-01-09 17:49:59,206 | INFO     | intersect: 1048837747.9130405
[2026-01-09 12:50:42] 2026-01-09 17:49:59,207 | INFO     | chi2: 0.03368991671876421
[2026-01-09 12:50:42] 2026-01-09 17:49:59,207 | INFO     | current memory leak: -0.59 B/s (using 297 data points, chi2=0.03)
[2026-01-09 12:50:42] 2026-01-09 17:49:59,214 | INFO     | could have reported an average CPU frequency of 2980 MHz (14 samples)
[2026-01-09 12:50:42] 2026-01-09 17:49:59,214 | INFO     | ..............................
[2026-01-09 12:50:42] 2026-01-09 17:49:59,214 | INFO     | . Timing measurements:
[2026-01-09 12:50:42] 2026-01-09 17:49:59,214 | INFO     | . get job = 0 s
[2026-01-09 12:50:42] 2026-01-09 17:49:59,214 | INFO     | . initial setup = 5 s
[2026-01-09 12:50:42] 2026-01-09 17:49:59,214 | INFO     | . payload setup = 36 s
[2026-01-09 12:50:42] 2026-01-09 17:49:59,214 | INFO     | . stage-in = 0 s
[2026-01-09 12:50:42] 2026-01-09 17:49:59,214 | INFO     | . payload execution = 20019 s
[2026-01-09 12:50:42] 2026-01-09 17:49:59,215 | INFO     | . stage-out = 5 s
[2026-01-09 12:50:42] 2026-01-09 17:49:59,215 | INFO     | . log creation = 0 s
[2026-01-09 12:50:42] 2026-01-09 17:49:59,215 | INFO     | ..............................
[2026-01-09 12:50:42] 2026-01-09 17:49:59,372 | INFO     | 
[2026-01-09 12:50:42] 2026-01-09 17:49:59,372 | INFO     | job summary report
[2026-01-09 12:50:42] 2026-01-09 17:49:59,372 | INFO     | --------------------------------------------------
[2026-01-09 12:50:42] 2026-01-09 17:49:59,372 | INFO     | PanDA job id: 6963146700
[2026-01-09 12:50:42] 2026-01-09 17:49:59,372 | INFO     | task id: 47898826
[2026-01-09 12:50:42] 2026-01-09 17:49:59,372 | INFO     | errors: (none)
[2026-01-09 12:50:42] 2026-01-09 17:49:59,372 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:50:42] 2026-01-09 17:49:59,372 | INFO     | pilot state: finished 
[2026-01-09 12:50:42] 2026-01-09 17:49:59,372 | INFO     | transexitcode: 0
[2026-01-09 12:50:42] 2026-01-09 17:49:59,372 | INFO     | exeerrorcode: 0
[2026-01-09 12:50:42] 2026-01-09 17:49:59,372 | INFO     | exeerrordiag: 
[2026-01-09 12:50:42] 2026-01-09 17:49:59,372 | INFO     | exitcode: 0
[2026-01-09 12:50:42] 2026-01-09 17:49:59,373 | INFO     | exitmsg: OK
[2026-01-09 12:50:42] 2026-01-09 17:49:59,373 | INFO     | cpuconsumptiontime: 54621 s
[2026-01-09 12:50:42] 2026-01-09 17:49:59,373 | INFO     | nevents: 400
[2026-01-09 12:50:42] 2026-01-09 17:49:59,373 | INFO     | neventsw: 0
[2026-01-09 12:50:42] 2026-01-09 17:49:59,373 | INFO     | pid: 1942650
[2026-01-09 12:50:42] 2026-01-09 17:49:59,373 | INFO     | pgrp: 1942650
[2026-01-09 12:50:42] 2026-01-09 17:49:59,373 | INFO     | corecount: 8
[2026-01-09 12:50:42] 2026-01-09 17:49:59,373 | INFO     | event service: False
[2026-01-09 12:50:42] 2026-01-09 17:49:59,373 | INFO     | sizes: {0: 2283799, 1: 2283998, 12: 2283998, 23: 2284026, 28: 2284316, 34: 2284344, 20059: 2317969, 20060: 2317968, 20067: 2327022, 20068: 2327078, 20100: 2327272}
[2026-01-09 12:50:42] 2026-01-09 17:49:59,373 | INFO     | --------------------------------------------------
[2026-01-09 12:50:42] 2026-01-09 17:49:59,373 | INFO     | 
[2026-01-09 12:50:42] 2026-01-09 17:49:59,373 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 12:50:42] 2026-01-09 17:49:59,433 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:50:42] 2026-01-09 17:49:59,433 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:50:42] 2026-01-09 17:49:59,433 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:50:42] 2026-01-09 17:49:59,433 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:50:42] 2026-01-09 17:49:59,433 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:50:42] 2026-01-09 17:49:59,433 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:50:42] 2026-01-09 17:49:59,433 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:50:42] 2026-01-09 17:49:59,434 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:50:42] 2026-01-09 17:49:59,434 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:50:42] 2026-01-09 17:49:59,434 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:50:42] 2026-01-09 17:49:59,434 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:50:42] 2026-01-09 17:49:59,434 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:50:42] 2026-01-09 17:49:59,434 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:50:42] 2026-01-09 17:49:59,434 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:50:42] 2026-01-09 17:49:59,434 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:50:42] 2026-01-09 17:49:59,434 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:50:42] 2026-01-09 17:49:59,434 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:50:42] 2026-01-09 17:49:59,434 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:50:42] 2026-01-09 17:49:59,434 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:50:42] 2026-01-09 17:49:59,434 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:50:42] 2026-01-09 17:49:59,435 | INFO     | job 6963146700 has completed (purged errors)
[2026-01-09 12:50:42] 2026-01-09 17:49:59,435 | INFO     | overall cleanup function is called
[2026-01-09 12:50:42] 2026-01-09 17:50:00,449 | INFO     | --- collectZombieJob: --- 10, [1942650]
[2026-01-09 12:50:42] 2026-01-09 17:50:00,450 | INFO     | zombie collector waiting for pid 1942650
[2026-01-09 12:50:42] 2026-01-09 17:50:00,450 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:50:42] 2026-01-09 17:50:00,450 | INFO     | collected zombie processes
[2026-01-09 12:50:42] 2026-01-09 17:50:00,450 | INFO     | will attempt to kill all subprocesses of pid=1942650
[2026-01-09 12:50:42] 2026-01-09 17:50:01,201 | INFO     | process IDs to be killed: [1942650] (in reverse order)
[2026-01-09 12:50:42] 2026-01-09 17:50:01,396 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:50:42] 2026-01-09 17:50:01,397 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:50:42] 2026-01-09 17:50:01,419 | INFO     | did not find any defunct processes belonging to 1942650
[2026-01-09 12:50:42] 2026-01-09 17:50:01,452 | INFO     | did not find any defunct processes belonging to 1942650
[2026-01-09 12:50:42] 2026-01-09 17:50:01,452 | INFO     | ready for new job
[2026-01-09 12:50:42] 2026-01-09 17:50:01,453 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:50:42] 2026-01-09 17:50:01,455 | INFO     | ***************************************
[2026-01-09 12:50:42] 2026-01-09 17:50:01,455 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:50:42] 2026-01-09 17:50:01,455 | INFO     | ***************************************
[2026-01-09 12:50:42] 2026-01-09 17:50:01,463 | INFO     | 
[2026-01-09 12:50:42] 2026-01-09 17:50:01,467 | INFO     | architecture information:
[2026-01-09 12:50:42] 2026-01-09 17:50:01,476 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:50:42] 2026-01-09 17:50:01,520 | INFO     | cat /etc/os-release:
[2026-01-09 12:50:42] NAME="CentOS Linux"
[2026-01-09 12:50:42] VERSION="7 (Core)"
[2026-01-09 12:50:42] ID="centos"
[2026-01-09 12:50:42] ID_LIKE="rhel fedora"
[2026-01-09 12:50:42] VERSION_ID="7"
[2026-01-09 12:50:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:50:42] ANSI_COLOR="0;31"
[2026-01-09 12:50:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:50:42] HOME_URL="https://www.centos.org/"
[2026-01-09 12:50:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:50:42] 
[2026-01-09 12:50:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:50:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:50:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:50:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:50:42] 
[2026-01-09 12:50:42] 2026-01-09 17:50:01,520 | INFO     | ***************************************
[2026-01-09 12:50:42] 2026-01-09 17:50:02,026 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 12:50:42] 2026-01-09 17:50:02,072 | INFO     | sufficient remaining disk space (75085381632 B)
[2026-01-09 12:50:42] 2026-01-09 17:50:02,072 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:50:42] 2026-01-09 17:50:02,073 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:50:42] 2026-01-09 17:50:02,073 | INFO     | update_server=False
[2026-01-09 12:50:42] 2026-01-09 17:50:02,073 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:50:42] 2026-01-09 17:50:02,073 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:50:42] 2026-01-09 17:50:02,073 | INFO     | aborting loop
[2026-01-09 12:50:42] 2026-01-09 17:50:02,104 | INFO     | all job control threads have been joined
[2026-01-09 12:50:42] 2026-01-09 17:50:02,690 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:50:42] 2026-01-09 17:50:02,692 | INFO     | all data control threads have been joined
[2026-01-09 12:50:42] 2026-01-09 17:50:03,079 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:50:42] 2026-01-09 17:50:03,079 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:50:42] 2026-01-09 17:50:03,110 | INFO     | [job] control thread has finished
[2026-01-09 12:50:42] 2026-01-09 17:50:03,159 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:50:42] 2026-01-09 17:50:03,208 | INFO     | all payload control threads have been joined
[2026-01-09 12:50:42] 2026-01-09 17:50:03,288 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:50:42] 2026-01-09 17:50:03,530 | INFO     | [job] validate thread has finished
[2026-01-09 12:50:42] 2026-01-09 17:50:03,592 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:50:42] 2026-01-09 17:50:03,698 | INFO     | [data] control thread has finished
[2026-01-09 12:50:42] 2026-01-09 17:50:04,027 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:50:42] 2026-01-09 17:50:04,148 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:50:42] 2026-01-09 17:50:04,214 | INFO     | [payload] control thread has finished
[2026-01-09 12:50:42] 2026-01-09 17:50:04,336 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:50:42] 2026-01-09 17:50:04,387 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:50:42] 2026-01-09 17:50:04,549 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:50:42] 2026-01-09 17:50:04,697 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:50:42] 2026-01-09 17:50:05,050 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:50:42] 2026-01-09 17:50:05,393 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:50:42] 2026-01-09 17:50:09,073 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:50:42] 2026-01-09 17:50:33,446 | INFO     | PID=1931761 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 12:50:42] 2026-01-09 17:50:33,447 | INFO     | .. there are 10 such processes running
[2026-01-09 12:50:42] 2026-01-09 17:50:33,447 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:50:42] 2026-01-09 17:50:33,448 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:50:42] 2026-01-09 17:50:33,448 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:50:42] 2026-01-09 17:50:35,678 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:50:42] 2026-01-09 17:50:35,961 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140438382450496)>', '<ExcThread(monitor, started 140437838882560)>']
[2026-01-09 12:50:42] 2026-01-09 17:50:36,476 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:50:42] 2026-01-09 17:50:36,477 | INFO     | [monitor] control thread has ended
[2026-01-09 12:50:42] 2026-01-09 17:50:40,987 | INFO     | all workflow threads have been joined
[2026-01-09 12:50:42] 2026-01-09 17:50:41,025 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:50:42] 2026-01-09 17:50:41,026 | INFO     | traces error code: 0
[2026-01-09 12:50:42] 2026-01-09 17:50:41,026 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:50:42] 2026-01-09 17:50:41,526 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:50:42] 2026-01-09 17:50:41,542 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:50:42] 2026-01-09 17:50:41,558 [wrapper] pilotpid: 1931761
[2026-01-09 12:50:42] 2026-01-09 17:50:41,588 [wrapper] Pilot exit status: 0
[2026-01-09 12:50:42] 2026-01-09 17:50:41,686 [wrapper] pandaids: 6963146700
[2026-01-09 12:50:42] 2026-01-09 17:50:41,965 [wrapper] cleanup supervisor_pilot 2648519 1931762
[2026-01-09 12:50:42] 2026-01-09 17:50:41,979 [wrapper] Test setup, not cleaning
[2026-01-09 12:50:42] 2026-01-09 17:50:41,991 [wrapper] apfmon messages muted
[2026-01-09 12:50:42] 2026-01-09 17:50:42,013 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:50:42] 2026-01-09 17:50:42,036 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:50:42]  *** Error codes and diagnostics ***
[2026-01-09 12:50:42]     "exeErrorCode": 0,
[2026-01-09 12:50:42]     "exeErrorDiag": "",
[2026-01-09 12:50:42]     "pilotErrorCode": 0,
[2026-01-09 12:50:42]     "pilotErrorDiag": "",
[2026-01-09 12:50:42]  *** Listing of results directory ***
[2026-01-09 12:50:42] total 443784
[2026-01-09 12:50:42] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 10:02 pilot3.tar.gz
[2026-01-09 12:50:42] -rwx------. 1 boincer umatlas     36322 Jan  8 10:03 runpilot2-wrapper.sh
[2026-01-09 12:50:42] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 10:04 queuedata.json
[2026-01-09 12:50:42] -rw-r--r--. 1 boincer umatlas       100 Jan  9 07:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:50:42] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 07:12 run_atlas
[2026-01-09 12:50:42] -rw-r--r--. 1 boincer umatlas       105 Jan  9 07:12 job.xml
[2026-01-09 12:50:42] -rw-r--r--. 2 boincer umatlas 225148483 Jan  9 07:12 EVNT.47898824._001066.pool.root.1
[2026-01-09 12:50:42] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 07:12 start_atlas.sh
[2026-01-09 12:50:42] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 07:12 shared
[2026-01-09 12:50:42] -rw-r--r--. 2 boincer umatlas    592394 Jan  9 07:12 input.tar.gz
[2026-01-09 12:50:42] -rw-r--r--. 1 boincer umatlas         0 Jan  9 07:12 boinc_lockfile
[2026-01-09 12:50:42] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 07:13 pandaJob.out
[2026-01-09 12:50:42] -rw-------. 1 boincer umatlas        57 Jan  9 07:13 setup.sh.local
[2026-01-09 12:50:42] -rw-------. 1 boincer umatlas    989377 Jan  9 07:13 agis_schedconf.cvmfs.json
[2026-01-09 12:50:42] drwx------. 5 boincer umatlas      4096 Jan  9 07:14 pilot3
[2026-01-09 12:50:42] -rw-------. 1 boincer umatlas 219023286 Jan  9 12:48 HITS.47898826._027027.pool.root.1
[2026-01-09 12:50:42] -rw-r--r--. 1 boincer umatlas       531 Jan  9 12:48 boinc_task_state.xml
[2026-01-09 12:50:42] -rw-r--r--. 1 boincer umatlas      6839 Jan  9 12:48 init_data.xml
[2026-01-09 12:50:42] -rw-------. 1 boincer umatlas      1040 Jan  9 12:49 memory_monitor_summary.json
[2026-01-09 12:50:42] -rw-------. 1 boincer umatlas   1516240 Jan  9 12:49 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:50:42] -rw-------. 1 boincer umatlas    524442 Jan  9 12:49 log.47898826._027027.job.log.tgz.1
[2026-01-09 12:50:42] -rw-------. 1 boincer umatlas      7822 Jan  9 12:49 heartbeat.json
[2026-01-09 12:50:42] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 12:50 boinc_mmap_file
[2026-01-09 12:50:42] -rw-r--r--. 1 boincer umatlas        28 Jan  9 12:50 wrapper_checkpoint.txt
[2026-01-09 12:50:42] -rw-------. 1 boincer umatlas        95 Jan  9 12:50 pilot_heartbeat.json
[2026-01-09 12:50:42] -rw-------. 1 boincer umatlas      4824 Jan  9 12:50 pilotlog.txt
[2026-01-09 12:50:42] -rw-------. 1 boincer umatlas   2649669 Jan  9 12:50 log.47898826._027027.job.log.1
[2026-01-09 12:50:42] -rw-------. 1 boincer umatlas       357 Jan  9 12:50 output.list
[2026-01-09 12:50:42] -rw-r--r--. 1 boincer umatlas       620 Jan  9 12:50 runtime_log
[2026-01-09 12:50:42] -rw-------. 1 boincer umatlas   3194880 Jan  9 12:50 result.tar.gz
[2026-01-09 12:50:42] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 12:50 runtime_log.err
[2026-01-09 12:50:42] -rw-------. 1 boincer umatlas       656 Jan  9 12:50 kdkLDmGj6x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmThkKDm1AoYam.diag
[2026-01-09 12:50:42] -rw-r--r--. 1 boincer umatlas     21245 Jan  9 12:50 stderr.txt
[2026-01-09 12:50:42] HITS file was successfully produced:
[2026-01-09 12:50:42] -rw-------. 1 boincer umatlas 219023286 Jan  9 12:48 shared/HITS.pool.root.1
[2026-01-09 12:50:42]  *** Contents of shared directory: ***
[2026-01-09 12:50:42] total 437484
[2026-01-09 12:50:42] -rw-r--r--. 2 boincer umatlas 225148483 Jan  9 07:12 ATLAS.root_0
[2026-01-09 12:50:42] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 07:12 start_atlas.sh
[2026-01-09 12:50:42] -rw-r--r--. 2 boincer umatlas    592394 Jan  9 07:12 input.tar.gz
[2026-01-09 12:50:42] -rw-------. 1 boincer umatlas 219023286 Jan  9 12:48 HITS.pool.root.1
[2026-01-09 12:50:42] -rw-------. 1 boincer umatlas   3194880 Jan  9 12:50 result.tar.gz
12:50:43 (1925764): run_atlas exited; CPU time 55130.616720
12:50:43 (1925764): called boinc_finish(0)

</stderr_txt>
]]>

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