Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:26:18 (12437): wrapper (7.7.26015): starting
12:26:18 (12437): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 12:26:18] Arguments: --nthreads 8
[2026-01-09 12:26:18] Threads: 8
[2026-01-09 12:26:18] Checking for CVMFS
[2026-01-09 12:26:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 12:26:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 12:26:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 12:26:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 12:26:19] 2.11.2.0 29086 35352 95172 154942 0 57 16784483 25165824 0 130560 0 14521547 99.799 10261767 2860 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 12:26:19] CVMFS is ok
[2026-01-09 12:26:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 12:26:19] Checking for apptainer binary...
[2026-01-09 12:26:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 12:26:19] Running /usr/bin/apptainer --version
[2026-01-09 12:26:19] apptainer version 1.3.2-1.el7
[2026-01-09 12:26:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 12:26:20] cg-vwn413.simple-grid.lan
[2026-01-09 12:26:20] apptainer works
[2026-01-09 12:26:20] Set ATHENA_PROC_NUMBER=8
[2026-01-09 12:26:20] Set ATHENA_CORE_NUMBER=8
[2026-01-09 12:26:20] Starting ATLAS job with PandaID=6963156501
[2026-01-09 12:26:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 15:12:59]  *** The last 200 lines of the pilot log: ***
[2026-01-09 15:12:59] 2026-01-09 14:12:10,618 | INFO     | time since job start (9934s) is within the limit (349056.0s)
[2026-01-09 15:12:59] 2026-01-09 14:12:11,100 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 15:12:59] 2026-01-09 14:12:11,101 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 15:12:59] 2026-01-09 14:12:11,103 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6963156501/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 15:12:59] 2026-01-09 14:12:11,104 | INFO     | extracted standard info from prmon json
[2026-01-09 15:12:59] 2026-01-09 14:12:11,104 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 15:12:59] 2026-01-09 14:12:11,104 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 15:12:59] 2026-01-09 14:12:11,104 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 15:12:59] 2026-01-09 14:12:11,104 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 15:12:59] 2026-01-09 14:12:11,108 | INFO     | fitting pss+swap vs Time
[2026-01-09 15:12:59] 2026-01-09 14:12:11,109 | INFO     | sum of square deviations: 1342841922.0
[2026-01-09 15:12:59] 2026-01-09 14:12:11,110 | INFO     | sum of deviations: -31500898980.0
[2026-01-09 15:12:59] 2026-01-09 14:12:11,110 | INFO     | mean x: 1767962972.0
[2026-01-09 15:12:59] 2026-01-09 14:12:11,110 | INFO     | mean y: 2572272.2760736197
[2026-01-09 15:12:59] 2026-01-09 14:12:11,110 | INFO     | intersect: 41476123305.30122
[2026-01-09 15:12:59] 2026-01-09 14:12:11,111 | INFO     | chi2: 2.519795867520492
[2026-01-09 15:12:59] 2026-01-09 14:12:11,111 | INFO     | sum of square deviations: 1223016419.5
[2026-01-09 15:12:59] 2026-01-09 14:12:11,112 | INFO     | sum of deviations: -18668189534.0
[2026-01-09 15:12:59] 2026-01-09 14:12:11,112 | INFO     | mean x: 1767962819.5
[2026-01-09 15:12:59] 2026-01-09 14:12:11,112 | INFO     | mean y: 2588266.088607595
[2026-01-09 15:12:59] 2026-01-09 14:12:11,113 | INFO     | intersect: 26988869461.711617
[2026-01-09 15:12:59] 2026-01-09 14:12:11,113 | INFO     | chi2: 1.7611719114841935
[2026-01-09 15:12:59] 2026-01-09 14:12:11,113 | INFO     | current chi2=1.7611719114841935 (change=30.106564020314604 %)
[2026-01-09 15:12:59] 2026-01-09 14:12:11,113 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 15:12:59] 2026-01-09 14:12:11,114 | INFO     | sum of deviations: -16756595872.999998
[2026-01-09 15:12:59] 2026-01-09 14:12:11,115 | INFO     | mean x: 1767962667.0
[2026-01-09 15:12:59] 2026-01-09 14:12:11,115 | INFO     | mean y: 2590858.7843137253
[2026-01-09 15:12:59] 2026-01-09 14:12:11,115 | INFO     | intersect: 26678837378.95008
[2026-01-09 15:12:59] 2026-01-09 14:12:11,115 | INFO     | chi2: 1.7617619404259732
[2026-01-09 15:12:59] 2026-01-09 14:12:11,115 | INFO     | current chi2=1.7617619404259732 (change=-0.03350206404793808 %)
[2026-01-09 15:12:59] 2026-01-09 14:12:11,116 | INFO     | right removable region: 152
[2026-01-09 15:12:59] 2026-01-09 14:12:11,116 | INFO     | sum of square deviations: 1223016419.5
[2026-01-09 15:12:59] 2026-01-09 14:12:11,117 | INFO     | sum of deviations: -57949054927.000015
[2026-01-09 15:12:59] 2026-01-09 14:12:11,117 | INFO     | mean x: 1767963124.5
[2026-01-09 15:12:59] 2026-01-09 14:12:11,117 | INFO     | mean y: 2605484.1265822784
[2026-01-09 15:12:59] 2026-01-09 14:12:11,118 | INFO     | intersect: 83772365707.33435
[2026-01-09 15:12:59] 2026-01-09 14:12:11,118 | INFO     | chi2: 0.9453154505423351
[2026-01-09 15:12:59] 2026-01-09 14:12:11,118 | INFO     | current chi2=0.9453154505423351 (change=62.48444317544911 %)
[2026-01-09 15:12:59] 2026-01-09 14:12:11,118 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 15:12:59] 2026-01-09 14:12:11,120 | INFO     | sum of deviations: -56918102954.99995
[2026-01-09 15:12:59] 2026-01-09 14:12:11,120 | INFO     | mean x: 1767963277.0
[2026-01-09 15:12:59] 2026-01-09 14:12:11,120 | INFO     | mean y: 2604032.091503268
[2026-01-09 15:12:59] 2026-01-09 14:12:11,120 | INFO     | intersect: 90615392051.54709
[2026-01-09 15:12:59] 2026-01-09 14:12:11,120 | INFO     | chi2: 0.9210896526287194
[2026-01-09 15:12:59] 2026-01-09 14:12:11,120 | INFO     | current chi2=0.9210896526287194 (change=2.5627210366356694 %)
[2026-01-09 15:12:59] 2026-01-09 14:12:11,121 | INFO     | left removable region: 20
[2026-01-09 15:12:59] 2026-01-09 14:12:11,121 | INFO     | sum of square deviations: 713140813.0
[2026-01-09 15:12:59] 2026-01-09 14:12:11,122 | INFO     | sum of deviations: -35452615467.50001
[2026-01-09 15:12:59] 2026-01-09 14:12:11,122 | INFO     | mean x: 1767963246.5
[2026-01-09 15:12:59] 2026-01-09 14:12:11,122 | INFO     | mean y: 2617137.265151515
[2026-01-09 15:12:59] 2026-01-09 14:12:11,122 | INFO     | intersect: 87893984446.84785
[2026-01-09 15:12:59] 2026-01-09 14:12:11,123 | INFO     | chi2: 0.11669540047158194
[2026-01-09 15:12:59] 2026-01-09 14:12:11,123 | INFO     | current memory leak: -49.71 B/s (using 132 data points, chi2=0.12)
[2026-01-09 15:12:59] 2026-01-09 14:12:11,124 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 15:12:59] 2026-01-09 14:12:11,124 | INFO     | ..............................
[2026-01-09 15:12:59] 2026-01-09 14:12:11,124 | INFO     | . Timing measurements:
[2026-01-09 15:12:59] 2026-01-09 14:12:11,124 | INFO     | . get job = 0 s
[2026-01-09 15:12:59] 2026-01-09 14:12:11,124 | INFO     | . initial setup = 1 s
[2026-01-09 15:12:59] 2026-01-09 14:12:11,124 | INFO     | . payload setup = 8 s
[2026-01-09 15:12:59] 2026-01-09 14:12:11,124 | INFO     | . stage-in = 0 s
[2026-01-09 15:12:59] 2026-01-09 14:12:11,124 | INFO     | . payload execution = 9895 s
[2026-01-09 15:12:59] 2026-01-09 14:12:11,125 | INFO     | . stage-out = 1 s
[2026-01-09 15:12:59] 2026-01-09 14:12:11,125 | INFO     | . log creation = 0 s
[2026-01-09 15:12:59] 2026-01-09 14:12:11,125 | INFO     | ..............................
[2026-01-09 15:12:59] 2026-01-09 14:12:11,241 | INFO     | 
[2026-01-09 15:12:59] 2026-01-09 14:12:11,241 | INFO     | job summary report
[2026-01-09 15:12:59] 2026-01-09 14:12:11,242 | INFO     | --------------------------------------------------
[2026-01-09 15:12:59] 2026-01-09 14:12:11,242 | INFO     | PanDA job id: 6963156501
[2026-01-09 15:12:59] 2026-01-09 14:12:11,242 | INFO     | task id: 47898826
[2026-01-09 15:12:59] 2026-01-09 14:12:11,242 | INFO     | errors: (none)
[2026-01-09 15:12:59] 2026-01-09 14:12:11,242 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 15:12:59] 2026-01-09 14:12:11,242 | INFO     | pilot state: finished 
[2026-01-09 15:12:59] 2026-01-09 14:12:11,242 | INFO     | transexitcode: 0
[2026-01-09 15:12:59] 2026-01-09 14:12:11,242 | INFO     | exeerrorcode: 0
[2026-01-09 15:12:59] 2026-01-09 14:12:11,243 | INFO     | exeerrordiag: 
[2026-01-09 15:12:59] 2026-01-09 14:12:11,243 | INFO     | exitcode: 0
[2026-01-09 15:12:59] 2026-01-09 14:12:11,243 | INFO     | exitmsg: OK
[2026-01-09 15:12:59] 2026-01-09 14:12:11,243 | INFO     | cpuconsumptiontime: 75102 s
[2026-01-09 15:12:59] 2026-01-09 14:12:11,243 | INFO     | nevents: 400
[2026-01-09 15:12:59] 2026-01-09 14:12:11,243 | INFO     | neventsw: 0
[2026-01-09 15:12:59] 2026-01-09 14:12:11,243 | INFO     | pid: 22609
[2026-01-09 15:12:59] 2026-01-09 14:12:11,243 | INFO     | pgrp: 22609
[2026-01-09 15:12:59] 2026-01-09 14:12:11,243 | INFO     | corecount: 8
[2026-01-09 15:12:59] 2026-01-09 14:12:11,243 | INFO     | event service: False
[2026-01-09 15:12:59] 2026-01-09 14:12:11,244 | INFO     | sizes: {0: 2283798, 1: 2283997, 7: 2284259, 12: 2284287, 9908: 2312630, 9909: 2321630, 9911: 2321814, 9917: 2322072}
[2026-01-09 15:12:59] 2026-01-09 14:12:11,244 | INFO     | --------------------------------------------------
[2026-01-09 15:12:59] 2026-01-09 14:12:11,244 | INFO     | 
[2026-01-09 15:12:59] 2026-01-09 14:12:11,244 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-01-09 15:12:59] 2026-01-09 14:12:11,284 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 15:12:59] 2026-01-09 14:12:11,284 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 15:12:59] 2026-01-09 14:12:11,284 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 15:12:59] 2026-01-09 14:12:11,284 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 15:12:59] 2026-01-09 14:12:11,284 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 15:12:59] 2026-01-09 14:12:11,284 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 15:12:59] 2026-01-09 14:12:11,285 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 15:12:59] 2026-01-09 14:12:11,285 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 15:12:59] 2026-01-09 14:12:11,285 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 15:12:59] 2026-01-09 14:12:11,285 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 15:12:59] 2026-01-09 14:12:11,285 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 15:12:59] 2026-01-09 14:12:11,285 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 15:12:59] 2026-01-09 14:12:11,285 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 15:12:59] 2026-01-09 14:12:11,285 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 15:12:59] 2026-01-09 14:12:11,286 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 15:12:59] 2026-01-09 14:12:11,286 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 15:12:59] 2026-01-09 14:12:11,286 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 15:12:59] 2026-01-09 14:12:11,286 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 15:12:59] 2026-01-09 14:12:11,286 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 15:12:59] 2026-01-09 14:12:11,286 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 15:12:59] 2026-01-09 14:12:11,286 | INFO     | job 6963156501 has completed (purged errors)
[2026-01-09 15:12:59] 2026-01-09 14:12:11,287 | INFO     | overall cleanup function is called
[2026-01-09 15:12:59] 2026-01-09 14:12:12,295 | INFO     | --- collectZombieJob: --- 10, [22609]
[2026-01-09 15:12:59] 2026-01-09 14:12:12,295 | INFO     | zombie collector waiting for pid 22609
[2026-01-09 15:12:59] 2026-01-09 14:12:12,296 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 15:12:59] 2026-01-09 14:12:12,296 | INFO     | collected zombie processes
[2026-01-09 15:12:59] 2026-01-09 14:12:12,296 | INFO     | will attempt to kill all subprocesses of pid=22609
[2026-01-09 15:12:59] 2026-01-09 14:12:12,368 | INFO     | process IDs to be killed: [22609] (in reverse order)
[2026-01-09 15:12:59] 2026-01-09 14:12:12,497 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 15:12:59] 2026-01-09 14:12:12,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 15:12:59] 2026-01-09 14:12:12,499 | INFO     | did not find any defunct processes belonging to 22609
[2026-01-09 15:12:59] 2026-01-09 14:12:12,501 | INFO     | did not find any defunct processes belonging to 22609
[2026-01-09 15:12:59] 2026-01-09 14:12:12,501 | INFO     | ready for new job
[2026-01-09 15:12:59] 2026-01-09 14:12:12,502 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 15:12:59] 2026-01-09 14:12:12,503 | INFO     | ***************************************
[2026-01-09 15:12:59] 2026-01-09 14:12:12,504 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 15:12:59] 2026-01-09 14:12:12,504 | INFO     | ***************************************
[2026-01-09 15:12:59] 2026-01-09 14:12:12,504 | INFO     | 
[2026-01-09 15:12:59] 2026-01-09 14:12:12,504 | INFO     | pilot is running in a VM
[2026-01-09 15:12:59] 2026-01-09 14:12:12,505 | INFO     | architecture information:
[2026-01-09 15:12:59] 2026-01-09 14:12:12,505 | INFO     | executing command: cat /etc/os-release
[2026-01-09 15:12:59] 2026-01-09 14:12:12,525 | INFO     | cat /etc/os-release:
[2026-01-09 15:12:59] NAME="CentOS Linux"
[2026-01-09 15:12:59] VERSION="7 (Core)"
[2026-01-09 15:12:59] ID="centos"
[2026-01-09 15:12:59] ID_LIKE="rhel fedora"
[2026-01-09 15:12:59] VERSION_ID="7"
[2026-01-09 15:12:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 15:12:59] ANSI_COLOR="0;31"
[2026-01-09 15:12:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 15:12:59] HOME_URL="https://www.centos.org/"
[2026-01-09 15:12:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 15:12:59] 
[2026-01-09 15:12:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 15:12:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 15:12:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 15:12:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 15:12:59] 
[2026-01-09 15:12:59] 2026-01-09 14:12:12,526 | INFO     | ***************************************
[2026-01-09 15:12:59] 2026-01-09 14:12:13,027 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-01-09 15:12:59] 2026-01-09 14:12:13,053 | INFO     | sufficient remaining disk space (498109251584 B)
[2026-01-09 15:12:59] 2026-01-09 14:12:13,053 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 15:12:59] 2026-01-09 14:12:13,054 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 15:12:59] 2026-01-09 14:12:13,054 | INFO     | update_server=False
[2026-01-09 15:12:59] 2026-01-09 14:12:13,054 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 15:12:59] 2026-01-09 14:12:13,054 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:12:59] 2026-01-09 14:12:13,252 | INFO     | all payload control threads have been joined
[2026-01-09 15:12:59] 2026-01-09 14:12:13,420 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 15:12:59] 2026-01-09 14:12:13,421 | INFO     | aborting loop
[2026-01-09 15:12:59] 2026-01-09 14:12:13,517 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 15:12:59] 2026-01-09 14:12:13,746 | INFO     | all job control threads have been joined
[2026-01-09 15:12:59] 2026-01-09 14:12:13,776 | INFO     | all data control threads have been joined
[2026-01-09 15:12:59] 2026-01-09 14:12:14,059 | INFO     | [job] retrieve thread has finished
[2026-01-09 15:12:59] 2026-01-09 14:12:14,060 | INFO     | [job] queue monitor thread has finished
[2026-01-09 15:12:59] 2026-01-09 14:12:14,258 | INFO     | [payload] control thread has finished
[2026-01-09 15:12:59] 2026-01-09 14:12:14,274 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 15:12:59] 2026-01-09 14:12:14,344 | INFO     | [data] copytool_in thread has finished
[2026-01-09 15:12:59] 2026-01-09 14:12:14,407 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 15:12:59] 2026-01-09 14:12:14,426 | INFO     | [job] job monitor thread has finished
[2026-01-09 15:12:59] 2026-01-09 14:12:14,676 | INFO     | [payload] failed_post thread has finished
[2026-01-09 15:12:59] 2026-01-09 14:12:14,752 | INFO     | [job] control thread has finished
[2026-01-09 15:12:59] 2026-01-09 14:12:14,782 | INFO     | [data] control thread has finished
[2026-01-09 15:12:59] 2026-01-09 14:12:14,936 | INFO     | [job] validate thread has finished
[2026-01-09 15:12:59] 2026-01-09 14:12:15,042 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 15:12:59] 2026-01-09 14:12:15,334 | INFO     | [payload] validate_post thread has finished
[2026-01-09 15:12:59] 2026-01-09 14:12:15,474 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 15:12:59] 2026-01-09 14:12:15,523 | INFO     | [data] copytool_out thread has finished
[2026-01-09 15:12:59] 2026-01-09 14:12:19,480 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 15:12:59] 2026-01-09 14:12:23,308 | INFO     | job.realtimelogging is not enabled
[2026-01-09 15:12:59] 2026-01-09 14:12:24,314 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 15:12:59] 2026-01-09 14:12:43,714 | INFO     | PID=16182 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 15:12:59] 2026-01-09 14:12:43,715 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 15:12:59] 2026-01-09 14:12:43,715 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 15:12:59] 2026-01-09 14:12:43,715 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 15:12:59] 2026-01-09 14:12:52,812 | INFO     | [monitor] cgroup control has ended
[2026-01-09 15:12:59] 2026-01-09 14:12:53,818 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140602360919872)>', '<ExcThread(monitor, started 140601752266496)>']
[2026-01-09 15:12:59] 2026-01-09 14:12:54,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 15:12:59] 2026-01-09 14:12:54,775 | INFO     | [monitor] control thread has ended
[2026-01-09 15:12:59] 2026-01-09 14:12:58,844 | INFO     | all workflow threads have been joined
[2026-01-09 15:12:59] 2026-01-09 14:12:58,844 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 15:12:59] 2026-01-09 14:12:58,845 | INFO     | traces error code: 0
[2026-01-09 15:12:59] 2026-01-09 14:12:58,845 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 15:12:59] 2026-01-09 14:12:58,985 [wrapper] ==== pilot stdout END ====
[2026-01-09 15:12:59] 2026-01-09 14:12:58,990 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 15:12:59] 2026-01-09 14:12:58,994 [wrapper] pilotpid: 16182
[2026-01-09 15:12:59] 2026-01-09 14:12:58,997 [wrapper] Pilot exit status: 0
[2026-01-09 15:12:59] 2026-01-09 14:12:59,017 [wrapper] pandaids: 6963156501
[2026-01-09 15:12:59] 2026-01-09 14:12:59,050 [wrapper] cleanup supervisor_pilot  9470 16183
[2026-01-09 15:12:59] 2026-01-09 14:12:59,055 [wrapper] Test setup, not cleaning
[2026-01-09 15:12:59] 2026-01-09 14:12:59,060 [wrapper] apfmon messages muted
[2026-01-09 15:12:59] 2026-01-09 14:12:59,064 [wrapper] ==== wrapper stdout END ====
[2026-01-09 15:12:59] 2026-01-09 14:12:59,067 [wrapper] ==== wrapper stderr END ====
[2026-01-09 15:12:59]  *** Error codes and diagnostics ***
[2026-01-09 15:12:59]     "exeErrorCode": 0,
[2026-01-09 15:12:59]     "exeErrorDiag": "",
[2026-01-09 15:12:59]     "pilotErrorCode": 0,
[2026-01-09 15:12:59]     "pilotErrorDiag": "",
[2026-01-09 15:12:59]  *** Listing of results directory ***
[2026-01-09 15:12:59] total 448644
[2026-01-09 15:12:59] -rw-r--r--. 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 15:12:59] -rwx------. 1 boinc boinc     36322 Jan  8 20:10 runpilot2-wrapper.sh
[2026-01-09 15:12:59] -rw-r--r--. 1 boinc boinc      5112 Jan  8 20:11 queuedata.json
[2026-01-09 15:12:59] -rw-r--r--. 1 boinc boinc       100 Jan  9 12:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 15:12:59] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 12:26 run_atlas
[2026-01-09 15:12:59] -rw-r--r--. 1 boinc boinc       105 Jan  9 12:26 job.xml
[2026-01-09 15:12:59] -rw-r--r--. 2 boinc boinc 227583420 Jan  9 12:26 EVNT.47898824._000906.pool.root.1
[2026-01-09 15:12:59] -rw-r--r--. 1 boinc boinc      6391 Jan  9 12:26 init_data.xml
[2026-01-09 15:12:59] -rw-r--r--. 2 boinc boinc     15847 Jan  9 12:26 start_atlas.sh
[2026-01-09 15:12:59] drwxrwx--x. 2 boinc boinc        68 Jan  9 12:26 shared
[2026-01-09 15:12:59] -rw-r--r--. 2 boinc boinc    592392 Jan  9 12:26 input.tar.gz
[2026-01-09 15:12:59] -rw-r--r--. 1 boinc boinc         0 Jan  9 12:26 boinc_lockfile
[2026-01-09 15:12:59] -rw-r--r--. 1 boinc boinc      2518 Jan  9 12:26 pandaJob.out
[2026-01-09 15:12:59] -rw-------. 1 boinc boinc    989377 Jan  9 12:26 agis_schedconf.cvmfs.json
[2026-01-09 15:12:59] -rw-------. 1 boinc boinc   1516240 Jan  9 12:26 agis_ddmendpoints.agis.ALL.json
[2026-01-09 15:12:59] drwx------. 5 boinc boinc      4096 Jan  9 12:26 pilot3
[2026-01-09 15:12:59] -rw-------. 1 boinc boinc 224440947 Jan  9 15:11 HITS.47898826._031671.pool.root.1
[2026-01-09 15:12:59] -rw-r--r--. 1 boinc boinc       530 Jan  9 15:11 boinc_task_state.xml
[2026-01-09 15:12:59] -rw-------. 1 boinc boinc      1011 Jan  9 15:11 memory_monitor_summary.json
[2026-01-09 15:12:59] -rw-------. 1 boinc boinc    408315 Jan  9 15:12 log.47898826._031671.job.log.tgz.1
[2026-01-09 15:12:59] -rw-------. 1 boinc boinc      7771 Jan  9 15:12 heartbeat.json
[2026-01-09 15:12:59] -rw-r--r--. 1 boinc boinc      8192 Jan  9 15:12 boinc_mmap_file
[2026-01-09 15:12:59] -rw-r--r--. 1 boinc boinc        28 Jan  9 15:12 wrapper_checkpoint.txt
[2026-01-09 15:12:59] -rw-------. 1 boinc boinc        95 Jan  9 15:12 pilot_heartbeat.json
[2026-01-09 15:12:59] -rw-------. 1 boinc boinc      4882 Jan  9 15:12 pilotlog.txt
[2026-01-09 15:12:59] -rw-------. 1 boinc boinc   1337573 Jan  9 15:12 log.47898826._031671.job.log.1
[2026-01-09 15:12:59] -rw-------. 1 boinc boinc       357 Jan  9 15:12 output.list
[2026-01-09 15:12:59] -rw-r--r--. 1 boinc boinc       620 Jan  9 15:12 runtime_log
[2026-01-09 15:12:59] -rw-------. 1 boinc boinc   1761280 Jan  9 15:12 result.tar.gz
[2026-01-09 15:12:59] -rw-------. 1 boinc boinc       653 Jan  9 15:12 TfVKDmwZAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlNlKDmTTKKPm.diag
[2026-01-09 15:12:59] -rw-r--r--. 1 boinc boinc      8832 Jan  9 15:12 runtime_log.err
[2026-01-09 15:12:59] -rw-r--r--. 1 boinc boinc     20725 Jan  9 15:12 stderr.txt
[2026-01-09 15:12:59] HITS file was successfully produced:
[2026-01-09 15:12:59] -rw-------. 1 boinc boinc 224440947 Jan  9 15:11 shared/HITS.pool.root.1
[2026-01-09 15:12:59]  *** Contents of shared directory: ***
[2026-01-09 15:12:59] total 443752
[2026-01-09 15:12:59] -rw-r--r--. 2 boinc boinc 227583420 Jan  9 12:26 ATLAS.root_0
[2026-01-09 15:12:59] -rw-r--r--. 2 boinc boinc     15847 Jan  9 12:26 start_atlas.sh
[2026-01-09 15:12:59] -rw-r--r--. 2 boinc boinc    592392 Jan  9 12:26 input.tar.gz
[2026-01-09 15:12:59] -rw-------. 1 boinc boinc 224440947 Jan  9 15:11 HITS.pool.root.1
[2026-01-09 15:12:59] -rw-------. 1 boinc boinc   1761280 Jan  9 15:12 result.tar.gz
15:13:01 (12437): run_atlas exited; CPU time 75166.772804
15:13:01 (12437): called boinc_finish(0)

</stderr_txt>
]]>

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