Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:57:55 (925243): wrapper (7.7.26015): starting
19:57:55 (925243): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 19:57:55] Arguments: --nthreads 4
[2026-01-09 19:57:55] Threads: 4
[2026-01-09 19:57:55] Checking for CVMFS
[2026-01-09 19:57:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:57:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:57:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:57:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:57:55] 2.9.2.0 157024 2651 90116 154953 2 57 21891186 36864001 0 130560 0 1978986 99.990 100462 5813 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 19:57:55] CVMFS is ok
[2026-01-09 19:57:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 19:57:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 19:57:55] Further information can be found at the LHC@home message board.
[2026-01-09 19:57:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:57:55] Checking for apptainer binary...
[2026-01-09 19:57:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:57:55] Running /usr/bin/apptainer --version
[2026-01-09 19:57:56] apptainer version 1.4.1-1.1
[2026-01-09 19:57:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:57:56] atlasA139
[2026-01-09 19:57:56] apptainer works
[2026-01-09 19:57:56] Set ATHENA_PROC_NUMBER=4
[2026-01-09 19:57:56] Set ATHENA_CORE_NUMBER=4
[2026-01-09 19:57:56] Starting ATLAS job with PandaID=6963156044
[2026-01-09 19:57:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:34:17]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:34:17]  is_tar=False
[2026-01-09 21:34:17]  lfn=log.47898826._031265.job.log.tgz.1
[2026-01-09 21:34:17]  mtime=0
[2026-01-09 21:34:17]  protocol_id=None
[2026-01-09 21:34:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 21:34:17]  replicas=None
[2026-01-09 21:34:17]  scope=mc23_13p6TeV
[2026-01-09 21:34:17]  status=None
[2026-01-09 21:34:17]  status_code=0
[2026-01-09 21:34:17]  storage_token=
[2026-01-09 21:34:17]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6963156044/log.47898826._031265.job.log.tgz.1
[2026-01-09 21:34:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/19/84/log.47898826._031265.job.log.tgz.1
[2026-01-09 21:34:17]  workdir=None
[2026-01-09 21:34:17] ]
[2026-01-09 21:34:17] 2026-01-09 20:33:31,474 | INFO     | transferring file log.47898826._031265.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6963156044/log.47898826._031265.job.log.tgz.1 to /local/data/boinc/
[2026-01-09 21:34:17] 2026-01-09 20:33:31,474 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6963156044/log.47898826._031265.job.log.tgz.1 /local/data/boinc/slots/0/log.47898826._0312
[2026-01-09 21:34:17] 2026-01-09 20:33:31,492 | INFO     | adding to output.list: log.47898826._031265.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/19/84/log.47898826._031265.job.log.tg
[2026-01-09 21:34:17] 2026-01-09 20:33:31,493 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 21:34:17] 2026-01-09 20:33:31,493 | INFO     | summary of transferred files:
[2026-01-09 21:34:17] 2026-01-09 20:33:31,493 | INFO     |  -- lfn=log.47898826._031265.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 21:34:17] 2026-01-09 20:33:31,493 | INFO     | stage-out finished correctly
[2026-01-09 21:34:17] 2026-01-09 20:33:31,586 | INFO     | PID=929038 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 21:34:17] 2026-01-09 20:33:32,587 | INFO     | time since job start (5729s) is within the limit (349056.0s)
[2026-01-09 21:34:17] 2026-01-09 20:33:33,617 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 21:34:17] 2026-01-09 20:33:33,740 | INFO     | job 6963156044 has state=finished
[2026-01-09 21:34:17] 2026-01-09 20:33:33,740 | INFO     | preparing for final server update for job 6963156044 in state='finished'
[2026-01-09 21:34:17] 2026-01-09 20:33:33,741 | INFO     | this job has now completed (state=finished)
[2026-01-09 21:34:17] 2026-01-09 20:33:33,741 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 21:34:17] 2026-01-09 20:33:33,741 | INFO     | log transfer has been attempted: DONE
[2026-01-09 21:34:17] 2026-01-09 20:33:33,741 | INFO     | job 6963156044 has finished - writing final server update
[2026-01-09 21:34:17] 2026-01-09 20:33:33,741 | INFO     | total number of processed events: 400 (read)
[2026-01-09 21:34:17] 2026-01-09 20:33:33,742 | INFO     | executing command: lscpu
[2026-01-09 21:34:17] 2026-01-09 20:33:33,763 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 21:34:17] 2026-01-09 20:33:34,594 | INFO     | time since job start (5731s) is within the limit (349056.0s)
[2026-01-09 21:34:17] 2026-01-09 20:33:35,076 | WARNING  | process 935627 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 21:34:17] 2026-01-09 20:33:35,076 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6963156044/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:34:17] 2026-01-09 20:33:35,135 | INFO     | number of running child processes to parent process 935627: 1
[2026-01-09 21:34:17] 2026-01-09 20:33:35,135 | INFO     | maximum number of monitored processes: 6
[2026-01-09 21:34:17] 2026-01-09 20:33:36,599 | INFO     | time since job start (5733s) is within the limit (349056.0s)
[2026-01-09 21:34:17] 2026-01-09 20:33:37,024 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 21:34:17] 2026-01-09 20:33:37,025 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3446.6446874999997
[2026-01-09 21:34:17] 2026-01-09 20:33:37,026 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6963156044/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:34:17] 2026-01-09 20:33:37,027 | INFO     | extracted standard info from prmon json
[2026-01-09 21:34:17] 2026-01-09 20:33:37,027 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:34:17] 2026-01-09 20:33:37,027 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:34:17] 2026-01-09 20:33:37,027 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:34:17] 2026-01-09 20:33:37,027 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:34:17] 2026-01-09 20:33:37,028 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:34:17] 2026-01-09 20:33:37,028 | INFO     | sum of square deviations: 204163828.0
[2026-01-09 21:34:17] 2026-01-09 20:33:37,028 | INFO     | sum of deviations: 622851175.0
[2026-01-09 21:34:17] 2026-01-09 20:33:37,028 | INFO     | mean x: 1767988034.0
[2026-01-09 21:34:17] 2026-01-09 20:33:37,028 | INFO     | mean y: 2409705.804597701
[2026-01-09 21:34:17] 2026-01-09 20:33:37,028 | INFO     | intersect: -5391265731.956296
[2026-01-09 21:34:17] 2026-01-09 20:33:37,028 | INFO     | chi2: 0.01644112756181871
[2026-01-09 21:34:17] 2026-01-09 20:33:37,028 | INFO     | current memory leak: 3.05 B/s (using 87 data points, chi2=0.02)
[2026-01-09 21:34:17] 2026-01-09 20:33:37,028 | INFO     | could have reported an average CPU frequency of 3691 MHz (7 samples)
[2026-01-09 21:34:17] 2026-01-09 20:33:37,028 | INFO     | ..............................
[2026-01-09 21:34:17] 2026-01-09 20:33:37,028 | INFO     | . Timing measurements:
[2026-01-09 21:34:17] 2026-01-09 20:33:37,028 | INFO     | . get job = 0 s
[2026-01-09 21:34:17] 2026-01-09 20:33:37,028 | INFO     | . initial setup = 1 s
[2026-01-09 21:34:17] 2026-01-09 20:33:37,028 | INFO     | . payload setup = 4 s
[2026-01-09 21:34:17] 2026-01-09 20:33:37,028 | INFO     | . stage-in = 0 s
[2026-01-09 21:34:17] 2026-01-09 20:33:37,029 | INFO     | . payload execution = 5705 s
[2026-01-09 21:34:17] 2026-01-09 20:33:37,029 | INFO     | . stage-out = 0 s
[2026-01-09 21:34:17] 2026-01-09 20:33:37,029 | INFO     | . log creation = 0 s
[2026-01-09 21:34:17] 2026-01-09 20:33:37,029 | INFO     | ..............................
[2026-01-09 21:34:17] 2026-01-09 20:33:37,067 | INFO     | 
[2026-01-09 21:34:17] 2026-01-09 20:33:37,067 | INFO     | job summary report
[2026-01-09 21:34:17] 2026-01-09 20:33:37,067 | INFO     | --------------------------------------------------
[2026-01-09 21:34:17] 2026-01-09 20:33:37,067 | INFO     | PanDA job id: 6963156044
[2026-01-09 21:34:17] 2026-01-09 20:33:37,067 | INFO     | task id: 47898826
[2026-01-09 21:34:17] 2026-01-09 20:33:37,067 | INFO     | errors: (none)
[2026-01-09 21:34:17] 2026-01-09 20:33:37,068 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:34:17] 2026-01-09 20:33:37,068 | INFO     | pilot state: finished 
[2026-01-09 21:34:17] 2026-01-09 20:33:37,068 | INFO     | transexitcode: 0
[2026-01-09 21:34:17] 2026-01-09 20:33:37,068 | INFO     | exeerrorcode: 0
[2026-01-09 21:34:17] 2026-01-09 20:33:37,068 | INFO     | exeerrordiag: 
[2026-01-09 21:34:17] 2026-01-09 20:33:37,068 | INFO     | exitcode: 0
[2026-01-09 21:34:17] 2026-01-09 20:33:37,068 | INFO     | exitmsg: OK
[2026-01-09 21:34:17] 2026-01-09 20:33:37,068 | INFO     | cpuconsumptiontime: 21913 s
[2026-01-09 21:34:17] 2026-01-09 20:33:37,068 | INFO     | nevents: 400
[2026-01-09 21:34:17] 2026-01-09 20:33:37,068 | INFO     | neventsw: 0
[2026-01-09 21:34:17] 2026-01-09 20:33:37,068 | INFO     | pid: 935627
[2026-01-09 21:34:17] 2026-01-09 20:33:37,068 | INFO     | pgrp: 935627
[2026-01-09 21:34:17] 2026-01-09 20:33:37,068 | INFO     | corecount: 4
[2026-01-09 21:34:17] 2026-01-09 20:33:37,068 | INFO     | event service: False
[2026-01-09 21:34:17] 2026-01-09 20:33:37,068 | INFO     | sizes: {0: 2283141, 1: 2284000, 4: 2284262, 11: 2284290, 5712: 2311094, 5713: 2320098, 5715: 2320282, 5719: 2320476}
[2026-01-09 21:34:17] 2026-01-09 20:33:37,068 | INFO     | --------------------------------------------------
[2026-01-09 21:34:17] 2026-01-09 20:33:37,068 | INFO     | 
[2026-01-09 21:34:17] 2026-01-09 20:33:37,068 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-09 21:34:17] 2026-01-09 20:33:37,086 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:34:17] 2026-01-09 20:33:37,086 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:34:17] 2026-01-09 20:33:37,087 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:34:17] 2026-01-09 20:33:37,087 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:34:17] 2026-01-09 20:33:37,087 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:34:17] 2026-01-09 20:33:37,087 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:34:17] 2026-01-09 20:33:37,087 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:34:17] 2026-01-09 20:33:37,087 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:34:17] 2026-01-09 20:33:37,087 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:34:17] 2026-01-09 20:33:37,087 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:34:17] 2026-01-09 20:33:37,087 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:34:17] 2026-01-09 20:33:37,087 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:34:17] 2026-01-09 20:33:37,087 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:34:17] 2026-01-09 20:33:37,087 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:34:17] 2026-01-09 20:33:37,087 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:34:17] 2026-01-09 20:33:37,087 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:34:17] 2026-01-09 20:33:37,087 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:34:17] 2026-01-09 20:33:37,087 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:34:17] 2026-01-09 20:33:37,087 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:34:17] 2026-01-09 20:33:37,087 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:34:17] 2026-01-09 20:33:37,087 | INFO     | job 6963156044 has completed (purged errors)
[2026-01-09 21:34:17] 2026-01-09 20:33:37,087 | INFO     | overall cleanup function is called
[2026-01-09 21:34:17] 2026-01-09 20:33:38,094 | INFO     | --- collectZombieJob: --- 10, [935627]
[2026-01-09 21:34:17] 2026-01-09 20:33:38,094 | INFO     | zombie collector waiting for pid 935627
[2026-01-09 21:34:17] 2026-01-09 20:33:38,094 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:34:17] 2026-01-09 20:33:38,094 | INFO     | collected zombie processes
[2026-01-09 21:34:17] 2026-01-09 20:33:38,094 | INFO     | will attempt to kill all subprocesses of pid=935627
[2026-01-09 21:34:17] 2026-01-09 20:33:38,139 | INFO     | process IDs to be killed: [935627] (in reverse order)
[2026-01-09 21:34:17] 2026-01-09 20:33:38,171 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:34:17] 2026-01-09 20:33:38,171 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:34:17] 2026-01-09 20:33:38,173 | INFO     | did not find any defunct processes belonging to 935627
[2026-01-09 21:34:17] 2026-01-09 20:33:38,174 | INFO     | did not find any defunct processes belonging to 935627
[2026-01-09 21:34:17] 2026-01-09 20:33:38,175 | INFO     | ready for new job
[2026-01-09 21:34:17] 2026-01-09 20:33:38,175 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:34:17] 2026-01-09 20:33:38,175 | INFO     | ***************************************
[2026-01-09 21:34:17] 2026-01-09 20:33:38,175 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:34:17] 2026-01-09 20:33:38,175 | INFO     | ***************************************
[2026-01-09 21:34:17] 2026-01-09 20:33:38,175 | INFO     | 
[2026-01-09 21:34:17] 2026-01-09 20:33:38,176 | INFO     | architecture information:
[2026-01-09 21:34:17] 2026-01-09 20:33:38,176 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:34:17] 2026-01-09 20:33:38,189 | INFO     | cat /etc/os-release:
[2026-01-09 21:34:17] NAME="CentOS Linux"
[2026-01-09 21:34:17] VERSION="7 (Core)"
[2026-01-09 21:34:17] ID="centos"
[2026-01-09 21:34:17] ID_LIKE="rhel fedora"
[2026-01-09 21:34:17] VERSION_ID="7"
[2026-01-09 21:34:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:34:17] ANSI_COLOR="0;31"
[2026-01-09 21:34:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:34:17] HOME_URL="https://www.centos.org/"
[2026-01-09 21:34:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:34:17] 
[2026-01-09 21:34:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:34:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:34:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:34:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:34:17] 
[2026-01-09 21:34:17] 2026-01-09 20:33:38,190 | INFO     | ***************************************
[2026-01-09 21:34:17] 2026-01-09 20:33:38,693 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-09 21:34:17] 2026-01-09 20:33:38,710 | INFO     | sufficient remaining disk space (337363599360 B)
[2026-01-09 21:34:17] 2026-01-09 20:33:38,711 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:34:17] 2026-01-09 20:33:38,711 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:34:17] 2026-01-09 20:33:38,711 | INFO     | update_server=False
[2026-01-09 21:34:17] 2026-01-09 20:33:38,711 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:34:17] 2026-01-09 20:33:38,711 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:34:17] 2026-01-09 20:33:38,711 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:34:17] 2026-01-09 20:33:38,711 | INFO     | aborting loop
[2026-01-09 21:34:17] 2026-01-09 20:33:39,392 | INFO     | all data control threads have been joined
[2026-01-09 21:34:17] 2026-01-09 20:33:39,404 | INFO     | all job control threads have been joined
[2026-01-09 21:34:17] 2026-01-09 20:33:39,549 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:34:17] 2026-01-09 20:33:39,652 | INFO     | all payload control threads have been joined
[2026-01-09 21:34:17] 2026-01-09 20:33:39,664 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:34:17] 2026-01-09 20:33:39,716 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:34:17] 2026-01-09 20:33:39,716 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:34:17] 2026-01-09 20:33:39,717 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:34:17] 2026-01-09 20:33:40,398 | INFO     | [data] control thread has finished
[2026-01-09 21:34:17] 2026-01-09 20:33:40,409 | INFO     | [job] control thread has finished
[2026-01-09 21:34:17] 2026-01-09 20:33:40,467 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:34:17] 2026-01-09 20:33:40,522 | INFO     | [job] validate thread has finished
[2026-01-09 21:34:17] 2026-01-09 20:33:40,567 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:34:17] 2026-01-09 20:33:40,654 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:34:17] 2026-01-09 20:33:40,658 | INFO     | [payload] control thread has finished
[2026-01-09 21:34:17] 2026-01-09 20:33:40,693 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:34:17] 2026-01-09 20:33:40,962 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:34:17] 2026-01-09 20:33:41,098 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:34:17] 2026-01-09 20:33:41,202 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:34:17] 2026-01-09 20:33:41,555 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:34:17] 2026-01-09 20:33:43,668 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:34:17] 2026-01-09 20:34:09,745 | INFO     | PID=929038 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 21:34:17] 2026-01-09 20:34:09,745 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:34:17] 2026-01-09 20:34:09,745 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:34:17] 2026-01-09 20:34:09,745 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:34:17] 2026-01-09 20:34:10,768 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:34:17] 2026-01-09 20:34:12,461 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139867378612032)>', '<ExcThread(monitor, started 139866574661376)>']
[2026-01-09 21:34:17] 2026-01-09 20:34:12,762 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:34:17] 2026-01-09 20:34:12,762 | INFO     | [monitor] control thread has ended
[2026-01-09 21:34:17] 2026-01-09 20:34:17,484 | INFO     | all workflow threads have been joined
[2026-01-09 21:34:17] 2026-01-09 20:34:17,484 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:34:17] 2026-01-09 20:34:17,485 | INFO     | traces error code: 0
[2026-01-09 21:34:17] 2026-01-09 20:34:17,485 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:34:17] 2026-01-09 20:34:17,555 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:34:17] 2026-01-09 20:34:17,559 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:34:17] 2026-01-09 20:34:17,563 [wrapper] pilotpid: 929038
[2026-01-09 21:34:17] 2026-01-09 20:34:17,567 [wrapper] Pilot exit status: 0
[2026-01-09 21:34:17] 2026-01-09 20:34:17,578 [wrapper] pandaids: 6963156044
[2026-01-09 21:34:17] 2026-01-09 20:34:17,600 [wrapper] cleanup supervisor_pilot  947796 929039
[2026-01-09 21:34:17] 2026-01-09 20:34:17,604 [wrapper] Test setup, not cleaning
[2026-01-09 21:34:17] 2026-01-09 20:34:17,608 [wrapper] apfmon messages muted
[2026-01-09 21:34:17] 2026-01-09 20:34:17,612 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:34:17] 2026-01-09 20:34:17,615 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:34:17]  *** Error codes and diagnostics ***
[2026-01-09 21:34:17]     "exeErrorCode": 0,
[2026-01-09 21:34:17]     "exeErrorDiag": "",
[2026-01-09 21:34:17]     "pilotErrorCode": 0,
[2026-01-09 21:34:17]     "pilotErrorDiag": "",
[2026-01-09 21:34:17]  *** Listing of results directory ***
[2026-01-09 21:34:17] total 440372
[2026-01-09 21:34:17] -rw-r--r-- 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 21:34:17] -rwx------ 1 boinc boinc     36322 Jan  8 20:10 runpilot2-wrapper.sh
[2026-01-09 21:34:17] -rw-r--r-- 1 boinc boinc      5112 Jan  8 20:11 queuedata.json
[2026-01-09 21:34:17] -rw-r--r-- 1 boinc boinc       100 Jan  9 19:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:34:17] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 19:57 run_atlas
[2026-01-09 21:34:17] -rw-r--r-- 1 boinc boinc       105 Jan  9 19:57 job.xml
[2026-01-09 21:34:17] -rw-r--r-- 2 boinc boinc 222966428 Jan  9 19:57 EVNT.47898824._000890.pool.root.1
[2026-01-09 21:34:17] -rw-r--r-- 2 boinc boinc    592395 Jan  9 19:57 input.tar.gz
[2026-01-09 21:34:17] -rw-r--r-- 2 boinc boinc     15847 Jan  9 19:57 start_atlas.sh
[2026-01-09 21:34:17] drwxrwx--x 2 boinc boinc      4096 Jan  9 19:57 shared
[2026-01-09 21:34:17] -rw-r--r-- 1 boinc boinc         0 Jan  9 19:57 boinc_setup_complete
[2026-01-09 21:34:17] -rw-r--r-- 1 boinc boinc      6372 Jan  9 19:57 init_data.xml
[2026-01-09 21:34:17] -rw-r--r-- 1 boinc boinc         0 Jan  9 19:57 boinc_lockfile
[2026-01-09 21:34:17] -rw-r--r-- 1 boinc boinc      2519 Jan  9 19:57 pandaJob.out
[2026-01-09 21:34:17] -rw------- 1 boinc boinc    989372 Jan  9 19:58 agis_schedconf.cvmfs.json
[2026-01-09 21:34:17] -rw------- 1 boinc boinc   1516240 Jan  9 19:58 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:34:17] drwx------ 5 boinc boinc      4096 Jan  9 19:58 pilot3
[2026-01-09 21:34:17] -rw------- 1 boinc boinc 221822030 Jan  9 21:33 HITS.47898826._031265.pool.root.1
[2026-01-09 21:34:17] -rw-r--r-- 1 boinc boinc       530 Jan  9 21:33 boinc_task_state.xml
[2026-01-09 21:34:17] -rw------- 1 boinc boinc      1019 Jan  9 21:33 memory_monitor_summary.json
[2026-01-09 21:34:17] -rw------- 1 boinc boinc    287792 Jan  9 21:33 log.47898826._031265.job.log.tgz.1
[2026-01-09 21:34:17] -rw------- 1 boinc boinc        95 Jan  9 21:33 pilot_heartbeat.json
[2026-01-09 21:34:17] -rw------- 1 boinc boinc      7759 Jan  9 21:33 heartbeat.json
[2026-01-09 21:34:17] -rw-r--r-- 1 boinc boinc      8192 Jan  9 21:33 boinc_mmap_file
[2026-01-09 21:34:17] -rw-r--r-- 1 boinc boinc        27 Jan  9 21:33 wrapper_checkpoint.txt
[2026-01-09 21:34:17] -rw------- 1 boinc boinc      4751 Jan  9 21:34 pilotlog.txt
[2026-01-09 21:34:17] -rw------- 1 boinc boinc    833223 Jan  9 21:34 log.47898826._031265.job.log.1
[2026-01-09 21:34:17] -rw------- 1 boinc boinc       357 Jan  9 21:34 output.list
[2026-01-09 21:34:17] -rw-r--r-- 1 boinc boinc       620 Jan  9 21:34 runtime_log
[2026-01-09 21:34:17] -rw------- 1 boinc boinc   1136640 Jan  9 21:34 result.tar.gz
[2026-01-09 21:34:17] -rw-r--r-- 1 boinc boinc      8912 Jan  9 21:34 runtime_log.err
[2026-01-09 21:34:17] -rw------- 1 boinc boinc       662 Jan  9 21:34 hygKDmbZAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm27fKDm3W1T5m.diag
[2026-01-09 21:34:17] -rw-r--r-- 1 boinc boinc     21719 Jan  9 21:34 stderr.txt
[2026-01-09 21:34:17] HITS file was successfully produced:
[2026-01-09 21:34:17] -rw------- 1 boinc boinc 221822030 Jan  9 21:33 shared/HITS.pool.root.1
[2026-01-09 21:34:17]  *** Contents of shared directory: ***
[2026-01-09 21:34:17] total 436080
[2026-01-09 21:34:17] -rw-r--r-- 2 boinc boinc 222966428 Jan  9 19:57 ATLAS.root_0
[2026-01-09 21:34:17] -rw-r--r-- 2 boinc boinc    592395 Jan  9 19:57 input.tar.gz
[2026-01-09 21:34:17] -rw-r--r-- 2 boinc boinc     15847 Jan  9 19:57 start_atlas.sh
[2026-01-09 21:34:17] -rw------- 1 boinc boinc 221822030 Jan  9 21:33 HITS.pool.root.1
[2026-01-09 21:34:17] -rw------- 1 boinc boinc   1136640 Jan  9 21:34 result.tar.gz
21:34:18 (925243): run_atlas exited; CPU time 21932.357260
21:34:18 (925243): called boinc_finish(0)

</stderr_txt>
]]>

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