Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:12:12 (3745413): wrapper (7.7.26015): starting
00:12:12 (3745413): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 00:12:12] Arguments: --nthreads 12
[2026-01-09 00:12:12] Threads: 12
[2026-01-09 00:12:12] Checking for CVMFS
[2026-01-09 00:12:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:12:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:12:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:12:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:12:13] 2.11.5.0 4071029 56276 146752 154936 2 574 32029600 45568001 17962 130560 0 398141332 99.779 255426617 20119 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-09 00:12:13] CVMFS is ok
[2026-01-09 00:12:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:12:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 00:12:13] Further information can be found at the LHC@home message board.
[2026-01-09 00:12:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:12:13] Checking for apptainer binary...
[2026-01-09 00:12:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 00:12:13] Running /usr/bin/apptainer --version
[2026-01-09 00:12:13] apptainer version 1.4.1-1.el9
[2026-01-09 00:12:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:12:14] wns0029.triumf.lcg
[2026-01-09 00:12:14] apptainer works
[2026-01-09 00:12:14] Set ATHENA_PROC_NUMBER=12
[2026-01-09 00:12:14] Set ATHENA_CORE_NUMBER=12
[2026-01-09 00:12:14] Starting ATLAS job with PandaID=6963155644
[2026-01-09 00:12:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 00:17:42]  *** The last 200 lines of the pilot log: ***
[2026-01-09 00:17:42] 2026-01-09 08:16:39,971 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 00:17:42] 2026-01-09 08:16:40,030 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 00:17:42] 2026-01-09 08:16:40,030 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | WARNING  | wrong length of table data, x=[1767946432.0], y=[1484.0] (must be same and length>=4)
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | could have reported an average CPU frequency of 2752 MHz (4 samples)
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | ..............................
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | . Timing measurements:
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | . get job = 0 s
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | . initial setup = 3 s
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | . payload setup = 17 s
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | . stage-in = 0 s
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | . payload execution = 56 s
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | . stage-out = 0 s
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | . log creation = 0 s
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | ..............................
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 00:17:42] 2026-01-09 08:16:40,032 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963155644/pilotlog.txt
[2026-01-09 00:17:42] 2026-01-09 08:16:40,046 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-09 00:17:42] - Log from pilotlog.txt -
[2026-01-09 00:17:42] 2026-01-09 08:16:39,967 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963155644/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 00:17:42] 2026-01-09 08:16:39,971 | INFO     | extracted standard info from prmon json
[2026-01-09 00:17:42] 2026-01-09 08:16:39,971 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 00:17:42] 2026-01-09 08:16:39,971 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 00:17:42] 2026-01-09 08:16:40,030 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 00:17:42] 2026-01-09 08:16:40,030 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | WARNING  | wrong length of table data, x=[1767946432.0], y=[1484.0] (must be same and length>=4)
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | could have reported an average CPU frequency of 2752 MHz (4 samples)
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | ..............................
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | . Timing measurements:
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | . get job = 0 s
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | . initial setup = 3 s
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | . payload setup = 17 s
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | . stage-in = 0 s
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | . payload execution = 56 s
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | . stage-out = 0 s
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | . log creation = 0 s
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | ..............................
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 00:17:42] 2026-01-09 08:16:40,032 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963155644/pilotlog.txt
[2026-01-09 00:17:42] 2026-01-09 08:16:40,047 | WARNING  | 
[2026-01-09 00:17:42] [begin log extracts]
[2026-01-09 00:17:42] - Log from pilotlog.txt -
[2026-01-09 00:17:42] 2026-01-09 08:16:39,967 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963155644/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 00:17:42] 2026-01-09 08:16:39,971 | INFO     | extracted standard info from prmon json
[2026-01-09 00:17:42] 2026-01-09 08:16:39,971 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 00:17:42] 2026-01-09 08:16:39,971 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 00:17:42] 2026-01-09 08:16:40,030 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 00:17:42] 2026-01-09 08:16:40,030 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | WARNING  | wrong length of table data, x=[1767946432.0], y=[1484.0] (must be same and length>=4)
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | could have reported an average CPU frequency of 2752 MHz (4 samples)
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | ..............................
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | . Timing measurements:
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | . get job = 0 s
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | . initial setup = 3 s
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | . payload setup = 17 s
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | . stage-in = 0 s
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | . payload execution = 56 s
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | . stage-out = 0 s
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | . log creation = 0 s
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | ..............................
[2026-01-09 00:17:42] 2026-01-09 08:16:40,031 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-09 00:17:42] 2026-01-09 08:16:40,032 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963155644/pilotlog.txt
[2026-01-09 00:17:42] [end log extracts]
[2026-01-09 00:17:42] 2026-01-09 08:16:40,047 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-09 00:17:42] 2026-01-09 08:16:40,047 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-09 00:17:42] 2026-01-09 08:16:40,171 | INFO     | 
[2026-01-09 00:17:42] 2026-01-09 08:16:40,172 | INFO     | job summary report
[2026-01-09 00:17:42] 2026-01-09 08:16:40,172 | INFO     | --------------------------------------------------
[2026-01-09 00:17:42] 2026-01-09 08:16:40,172 | INFO     | PanDA job id: 6963155644
[2026-01-09 00:17:42] 2026-01-09 08:16:40,172 | INFO     | task id: 47898826
[2026-01-09 00:17:42] 2026-01-09 08:16:40,172 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-09 00:14:20,144 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-09 00:17:42] 2026-01-09 08:16:40,172 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 00:17:42] 2026-01-09 08:16:40,172 | INFO     | pilot state: failed 
[2026-01-09 00:17:42] 2026-01-09 08:16:40,172 | INFO     | transexitcode: 65
[2026-01-09 00:17:42] 2026-01-09 08:16:40,172 | INFO     | exeerrorcode: 65
[2026-01-09 00:17:42] 2026-01-09 08:16:40,172 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-09 00:17:42] 2026-01-09 08:16:40,172 | INFO     | exitcode: 65
[2026-01-09 00:17:42] 2026-01-09 08:16:40,172 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-09 00:17:42] 2026-01-09 08:16:40,172 | INFO     | cpuconsumptiontime: 18 s
[2026-01-09 00:17:42] 2026-01-09 08:16:40,172 | INFO     | nevents: 0
[2026-01-09 00:17:42] 2026-01-09 08:16:40,172 | INFO     | neventsw: 0
[2026-01-09 00:17:42] 2026-01-09 08:16:40,172 | INFO     | pid: 3770009
[2026-01-09 00:17:42] 2026-01-09 08:16:40,172 | INFO     | pgrp: 3770009
[2026-01-09 00:17:42] 2026-01-09 08:16:40,172 | INFO     | corecount: 12
[2026-01-09 00:17:42] 2026-01-09 08:16:40,173 | INFO     | event service: False
[2026-01-09 00:17:42] 2026-01-09 08:16:40,173 | INFO     | sizes: {0: 2283968, 11: 2284258, 21: 2284258, 78: 2307511, 80: 2311831, 209: 2311969}
[2026-01-09 00:17:42] 2026-01-09 08:16:40,173 | INFO     | --------------------------------------------------
[2026-01-09 00:17:42] 2026-01-09 08:16:40,173 | INFO     | 
[2026-01-09 00:17:42] 2026-01-09 08:16:40,173 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-09 00:17:42] 2026-01-09 08:16:40,189 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 00:17:42] 2026-01-09 08:16:40,190 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 00:17:42] 2026-01-09 08:16:40,190 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 00:17:42] 2026-01-09 08:16:40,190 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 00:17:42] 2026-01-09 08:16:40,190 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 00:17:42] 2026-01-09 08:16:40,190 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 00:17:42] 2026-01-09 08:16:40,190 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 00:17:42] 2026-01-09 08:16:40,190 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 00:17:42] 2026-01-09 08:16:40,190 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 00:17:42] 2026-01-09 08:16:40,190 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 00:17:42] 2026-01-09 08:16:40,190 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 00:17:42] 2026-01-09 08:16:40,190 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 00:17:42] 2026-01-09 08:16:40,190 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 00:17:42] 2026-01-09 08:16:40,190 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 00:17:42] 2026-01-09 08:16:40,190 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 00:17:42] 2026-01-09 08:16:40,190 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 00:17:42] 2026-01-09 08:16:40,190 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 00:17:42] 2026-01-09 08:16:40,190 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 00:17:42] 2026-01-09 08:16:40,190 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 00:17:42] 2026-01-09 08:16:40,191 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 00:17:42] 2026-01-09 08:16:40,191 | INFO     | job 6963155644 has completed (purged errors)
[2026-01-09 00:17:42] 2026-01-09 08:16:40,191 | INFO     | overall cleanup function is called
[2026-01-09 00:17:42] 2026-01-09 08:16:41,197 | INFO     | --- collectZombieJob: --- 10, [3770009]
[2026-01-09 00:17:42] 2026-01-09 08:16:41,197 | INFO     | zombie collector waiting for pid 3770009
[2026-01-09 00:17:42] 2026-01-09 08:16:41,197 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 00:17:42] 2026-01-09 08:16:41,197 | INFO     | collected zombie processes
[2026-01-09 00:17:42] 2026-01-09 08:16:41,197 | INFO     | will attempt to kill all subprocesses of pid=3770009
[2026-01-09 00:17:42] 2026-01-09 08:16:41,549 | INFO     | process IDs to be killed: [3770009] (in reverse order)
[2026-01-09 00:17:42] 2026-01-09 08:16:41,633 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 00:17:42] 2026-01-09 08:16:41,633 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 00:17:42] 2026-01-09 08:16:41,651 | INFO     | did not find any defunct processes belonging to 3770009
[2026-01-09 00:17:42] 2026-01-09 08:16:41,674 | INFO     | did not find any defunct processes belonging to 3770009
[2026-01-09 00:17:42] 2026-01-09 08:16:41,675 | INFO     | ready for new job
[2026-01-09 00:17:42] 2026-01-09 08:16:41,675 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 00:17:42] 2026-01-09 08:16:41,686 | INFO     | ***************************************
[2026-01-09 00:17:42] 2026-01-09 08:16:41,686 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 00:17:42] 2026-01-09 08:16:41,686 | INFO     | ***************************************
[2026-01-09 00:17:42] 2026-01-09 08:16:41,686 | INFO     | 
[2026-01-09 00:17:42] 2026-01-09 08:16:41,688 | INFO     | architecture information:
[2026-01-09 00:17:42] 2026-01-09 08:16:41,698 | INFO     | executing command: cat /etc/os-release
[2026-01-09 00:17:42] 2026-01-09 08:16:41,753 | INFO     | cat /etc/os-release:
[2026-01-09 00:17:42] NAME="CentOS Linux"
[2026-01-09 00:17:42] VERSION="7 (Core)"
[2026-01-09 00:17:42] ID="centos"
[2026-01-09 00:17:42] ID_LIKE="rhel fedora"
[2026-01-09 00:17:42] VERSION_ID="7"
[2026-01-09 00:17:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 00:17:42] ANSI_COLOR="0;31"
[2026-01-09 00:17:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 00:17:42] HOME_URL="https://www.centos.org/"
[2026-01-09 00:17:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 00:17:42] 
[2026-01-09 00:17:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 00:17:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 00:17:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 00:17:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 00:17:42] 
[2026-01-09 00:17:42] 2026-01-09 08:16:41,754 | INFO     | ***************************************
[2026-01-09 00:17:42] 2026-01-09 08:16:42,257 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-09 00:17:42] 2026-01-09 08:16:42,317 | INFO     | sufficient remaining disk space (1176792727552 B)
[2026-01-09 00:17:42] 2026-01-09 08:16:42,318 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 00:17:42] 2026-01-09 08:16:42,318 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 00:17:42] 2026-01-09 08:16:42,318 | INFO     | update_server=False
[2026-01-09 00:17:42] 2026-01-09 08:16:42,318 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 00:17:42] 2026-01-09 08:16:42,318 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 00:17:42] 2026-01-09 08:16:42,598 | INFO     | all data control threads have been joined
[2026-01-09 00:17:42] 2026-01-09 08:16:43,019 | INFO     | all payload control threads have been joined
[2026-01-09 00:17:42] 2026-01-09 08:16:43,299 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 00:17:42] 2026-01-09 08:16:43,299 | INFO     | aborting loop
[2026-01-09 00:17:42] 2026-01-09 08:16:43,324 | INFO     | [job] retrieve thread has finished
[2026-01-09 00:17:42] 2026-01-09 08:16:43,416 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 00:17:42] 2026-01-09 08:16:43,427 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 00:17:42] 2026-01-09 08:16:43,437 | INFO     | all job control threads have been joined
[2026-01-09 00:17:42] 2026-01-09 08:16:43,501 | INFO     | [payload] failed_post thread has finished
[2026-01-09 00:17:42] 2026-01-09 08:16:43,604 | INFO     | [data] control thread has finished
[2026-01-09 00:17:42] 2026-01-09 08:16:43,813 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 00:17:42] 2026-01-09 08:16:44,003 | INFO     | [payload] validate_post thread has finished
[2026-01-09 00:17:42] 2026-01-09 08:16:44,025 | INFO     | [payload] control thread has finished
[2026-01-09 00:17:42] 2026-01-09 08:16:44,083 | INFO     | [job] validate thread has finished
[2026-01-09 00:17:42] 2026-01-09 08:16:44,208 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 00:17:42] 2026-01-09 08:16:44,264 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 00:17:42] 2026-01-09 08:16:44,305 | INFO     | [job] job monitor thread has finished
[2026-01-09 00:17:42] 2026-01-09 08:16:44,325 | INFO     | [data] copytool_out thread has finished
[2026-01-09 00:17:42] 2026-01-09 08:16:44,415 | INFO     | [data] copytool_in thread has finished
[2026-01-09 00:17:42] 2026-01-09 08:16:44,443 | INFO     | [job] control thread has finished
[2026-01-09 00:17:42] 2026-01-09 08:16:45,185 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 00:17:42] 2026-01-09 08:16:46,194 | INFO     | [job] queue monitor thread has finished
[2026-01-09 00:17:42] 2026-01-09 08:16:47,431 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 00:17:42] 2026-01-09 08:17:13,318 | INFO     | PID=3749334 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 00:17:42] 2026-01-09 08:17:13,318 | INFO     | .. there are 42 such processes running
[2026-01-09 00:17:42] 2026-01-09 08:17:13,318 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 00:17:42] 2026-01-09 08:17:13,318 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 00:17:42] 2026-01-09 08:17:13,319 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 00:17:42] 2026-01-09 08:17:35,517 | INFO     | [monitor] cgroup control has ended
[2026-01-09 00:17:42] 2026-01-09 08:17:37,180 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139819267565376)>', '<ExcThread(monitor, started 139818264672000)>']
[2026-01-09 00:17:42] 2026-01-09 08:17:37,477 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 00:17:42] 2026-01-09 08:17:37,477 | INFO     | [monitor] control thread has ended
[2026-01-09 00:17:42] 2026-01-09 08:17:42,206 | INFO     | all workflow threads have been joined
[2026-01-09 00:17:42] 2026-01-09 08:17:42,206 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 00:17:42] 2026-01-09 08:17:42,207 | INFO     | traces error code: 0
[2026-01-09 00:17:42] 2026-01-09 08:17:42,207 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 00:17:42] 2026-01-09 08:17:42,349 [wrapper] ==== pilot stdout END ====
[2026-01-09 00:17:42] 2026-01-09 08:17:42,351 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 00:17:42] 2026-01-09 08:17:42,353 [wrapper] pilotpid: 3749334
[2026-01-09 00:17:42] 2026-01-09 08:17:42,355 [wrapper] Pilot exit status: 0
[2026-01-09 00:17:42] 2026-01-09 08:17:42,365 [wrapper] pandaids: 6963155644
[2026-01-09 00:17:42] 2026-01-09 08:17:42,424 [wrapper] cleanup supervisor_pilot 3749340 3749335
[2026-01-09 00:17:42] 2026-01-09 08:17:42,428 [wrapper] Test setup, not cleaning
[2026-01-09 00:17:42] 2026-01-09 08:17:42,431 [wrapper] apfmon messages muted
[2026-01-09 00:17:42] 2026-01-09 08:17:42,433 [wrapper] ==== wrapper stdout END ====
[2026-01-09 00:17:42] 2026-01-09 08:17:42,437 [wrapper] ==== wrapper stderr END ====
[2026-01-09 00:17:42]  *** Error codes and diagnostics ***
[2026-01-09 00:17:42]     "exeErrorCode": 65,
[2026-01-09 00:17:42]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-09 00:17:42]     "pilotErrorCode": 1305,
[2026-01-09 00:17:42]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-09 00:17:42]  *** Listing of results directory ***
[2026-01-09 00:17:42] total 221928
[2026-01-09 00:17:42] -rw-r--r--. 1 boinc boinc    579449 Jan  8 11:06 pilot3.tar.gz
[2026-01-09 00:17:42] -rwx------. 1 boinc boinc     36322 Jan  8 11:09 runpilot2-wrapper.sh
[2026-01-09 00:17:42] -rw-r--r--. 1 boinc boinc      5112 Jan  8 11:11 queuedata.json
[2026-01-09 00:17:42] -rw-r--r--. 1 boinc boinc       100 Jan  9 00:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 00:17:42] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 00:12 run_atlas
[2026-01-09 00:17:42] -rw-r--r--. 1 boinc boinc       105 Jan  9 00:12 job.xml
[2026-01-09 00:17:42] -rw-r--r--. 2 boinc boinc 223111530 Jan  9 00:12 EVNT.47898824._001195.pool.root.1
[2026-01-09 00:17:42] -rw-r--r--. 1 boinc boinc      6594 Jan  9 00:12 init_data.xml
[2026-01-09 00:17:42] -rw-r--r--. 2 boinc boinc     15847 Jan  9 00:12 start_atlas.sh
[2026-01-09 00:17:42] drwxrwx--x. 2 boinc boinc      4096 Jan  9 00:12 shared
[2026-01-09 00:17:42] -rw-r--r--. 2 boinc boinc    592396 Jan  9 00:12 input.tar.gz
[2026-01-09 00:17:42] -rw-r--r--. 1 boinc boinc         0 Jan  9 00:12 boinc_lockfile
[2026-01-09 00:17:42] -rw-r--r--. 1 boinc boinc      2520 Jan  9 00:12 pandaJob.out
[2026-01-09 00:17:42] -rw-------. 1 boinc boinc    989771 Jan  9 00:12 agis_schedconf.cvmfs.json
[2026-01-09 00:17:42] -rw-------. 1 boinc boinc   1516240 Jan  9 00:12 agis_ddmendpoints.agis.ALL.json
[2026-01-09 00:17:42] drwx------. 5 boinc boinc      4096 Jan  9 00:12 pilot3
[2026-01-09 00:17:42] -rw-r--r--. 1 boinc boinc       523 Jan  9 00:14 boinc_task_state.xml
[2026-01-09 00:17:42] -rw-------. 1 boinc boinc       963 Jan  9 00:14 memory_monitor_summary.json
[2026-01-09 00:17:42] -rw-------. 1 boinc boinc     21348 Jan  9 00:14 log.47898826._030866.job.log.tgz.1
[2026-01-09 00:17:42] -rw-------. 1 boinc boinc        95 Jan  9 00:16 pilot_heartbeat.json
[2026-01-09 00:17:42] -rw-------. 1 boinc boinc      8392 Jan  9 00:16 heartbeat.json
[2026-01-09 00:17:42] -rw-r--r--. 1 boinc boinc        22 Jan  9 00:17 wrapper_checkpoint.txt
[2026-01-09 00:17:42] -rw-r--r--. 1 boinc boinc      8192 Jan  9 00:17 boinc_mmap_file
[2026-01-09 00:17:42] -rw-------. 1 boinc boinc      4823 Jan  9 00:17 pilotlog.txt
[2026-01-09 00:17:42] -rw-------. 1 boinc boinc     91523 Jan  9 00:17 log.47898826._030866.job.log.1
[2026-01-09 00:17:42] -rw-------. 1 boinc boinc       188 Jan  9 00:17 output.list
[2026-01-09 00:17:42] -rw-r--r--. 1 boinc boinc       620 Jan  9 00:17 runtime_log
[2026-01-09 00:17:42] -rw-------. 1 boinc boinc    133120 Jan  9 00:17 result.tar.gz
[2026-01-09 00:17:42] -rw-r--r--. 1 boinc boinc      8636 Jan  9 00:17 runtime_log.err
[2026-01-09 00:17:42] -rw-------. 1 boinc boinc       645 Jan  9 00:17 Q8GMDmPZAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmc6fKDmyetN4n.diag
[2026-01-09 00:17:42] -rw-r--r--. 1 boinc boinc     21769 Jan  9 00:17 stderr.txt
[2026-01-09 00:17:42] No HITS result produced
[2026-01-09 00:17:42]  *** Contents of shared directory: ***
[2026-01-09 00:17:42] total 218616
[2026-01-09 00:17:42] -rw-r--r--. 2 boinc boinc 223111530 Jan  9 00:12 ATLAS.root_0
[2026-01-09 00:17:42] -rw-r--r--. 2 boinc boinc     15847 Jan  9 00:12 start_atlas.sh
[2026-01-09 00:17:42] -rw-r--r--. 2 boinc boinc    592396 Jan  9 00:12 input.tar.gz
[2026-01-09 00:17:42] -rw-------. 1 boinc boinc    133120 Jan  9 00:17 result.tar.gz
00:17:44 (3745413): run_atlas exited; CPU time 27.772513
00:17:44 (3745413): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN