Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
00:42:07 (215363): wrapper (7.7.26015): starting
00:42:07 (215363): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 00:42:07] Arguments: --nthreads 4
[2026-01-09 00:42:07] Threads: 4
[2026-01-09 00:42:07] Checking for CVMFS
[2026-01-09 00:42:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:42:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:42:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:42:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:42:07] 2.12.7.0 5258 188 51304 154937 0 188 5093462 6144000 2769 130560 0 476164 99.999 5442 700 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-09 00:42:07] CVMFS is ok
[2026-01-09 00:42:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:42:07] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-09 00:42:07] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-09 00:42:07] Further information can be found at the LHC@home message board.
[2026-01-09 00:42:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:42:07] Checking for apptainer binary...
[2026-01-09 00:42:07] apptainer is not installed, using version from CVMFS
[2026-01-09 00:42:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:42:08] k8plus
[2026-01-09 00:42:08] apptainer works
[2026-01-09 00:42:08] Set ATHENA_PROC_NUMBER=4
[2026-01-09 00:42:08] Set ATHENA_CORE_NUMBER=4
[2026-01-09 00:42:08] Starting ATLAS job with PandaID=6963146458
[2026-01-09 00:42:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 02:50:16]  *** The last 200 lines of the pilot log: ***
[2026-01-09 02:50:16] 2026-01-09 10:49:42,671 | INFO     | total number of processed events: 400 (read)
[2026-01-09 02:50:16] 2026-01-09 10:49:42,672 | INFO     | executing command: lscpu
[2026-01-09 02:50:16] 2026-01-09 10:49:42,689 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 02:50:16] 2026-01-09 10:49:43,032 | WARNING  | process 225934 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 02:50:16] 2026-01-09 10:49:43,032 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6963146458/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 02:50:16] 2026-01-09 10:49:43,118 | INFO     | number of running child processes to parent process 225934: 1
[2026-01-09 02:50:16] 2026-01-09 10:49:43,118 | INFO     | maximum number of monitored processes: 6
[2026-01-09 02:50:16] 2026-01-09 10:49:43,677 | INFO     | time since job start (7622s) is within the limit (349056.0s)
[2026-01-09 02:50:16] 2026-01-09 10:49:45,015 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 02:50:16] 2026-01-09 10:49:45,016 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3999.2518124999997
[2026-01-09 02:50:16] 2026-01-09 10:49:45,018 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6963146458/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 02:50:16] 2026-01-09 10:49:45,018 | INFO     | extracted standard info from prmon json
[2026-01-09 02:50:16] 2026-01-09 10:49:45,019 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 02:50:16] 2026-01-09 10:49:45,019 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 02:50:16] 2026-01-09 10:49:45,019 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 02:50:16] 2026-01-09 10:49:45,019 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 02:50:16] 2026-01-09 10:49:45,020 | INFO     | fitting pss+swap vs Time
[2026-01-09 02:50:16] 2026-01-09 10:49:45,020 | INFO     | sum of square deviations: 605592750.0
[2026-01-09 02:50:16] 2026-01-09 10:49:45,021 | INFO     | sum of deviations: -1018877753.9999993
[2026-01-09 02:50:16] 2026-01-09 10:49:45,021 | INFO     | mean x: 1767951966.0
[2026-01-09 02:50:16] 2026-01-09 10:49:45,021 | INFO     | mean y: 2369673.872
[2026-01-09 02:50:16] 2026-01-09 10:49:45,021 | INFO     | intersect: 2976855296.9214225
[2026-01-09 02:50:16] 2026-01-09 10:49:45,021 | INFO     | chi2: 1.1536861886267784
[2026-01-09 02:50:16] 2026-01-09 10:49:45,021 | INFO     | sum of square deviations: 535786790.0
[2026-01-09 02:50:16] 2026-01-09 10:49:45,021 | INFO     | sum of deviations: -782919658.500001
[2026-01-09 02:50:16] 2026-01-09 10:49:45,021 | INFO     | mean x: 1767951813.5
[2026-01-09 02:50:16] 2026-01-09 10:49:45,021 | INFO     | mean y: 2370191.2583333333
[2026-01-09 02:50:16] 2026-01-09 10:49:45,021 | INFO     | intersect: 2585793776.729482
[2026-01-09 02:50:16] 2026-01-09 10:49:45,022 | INFO     | chi2: 1.154142112182604
[2026-01-09 02:50:16] 2026-01-09 10:49:45,022 | INFO     | current chi2=1.154142112182604 (change=-0.03951885359469974 %)
[2026-01-09 02:50:16] 2026-01-09 10:49:45,022 | INFO     | right removable region: 119
[2026-01-09 02:50:16] 2026-01-09 10:49:45,022 | INFO     | sum of square deviations: 535786790.0
[2026-01-09 02:50:16] 2026-01-09 10:49:45,022 | INFO     | sum of deviations: -12279845004.50001
[2026-01-09 02:50:16] 2026-01-09 10:49:45,022 | INFO     | mean x: 1767952118.5
[2026-01-09 02:50:16] 2026-01-09 10:49:45,022 | INFO     | mean y: 2393601.7083333335
[2026-01-09 02:50:16] 2026-01-09 10:49:45,022 | INFO     | intersect: 40522575128.68745
[2026-01-09 02:50:16] 2026-01-09 10:49:45,022 | INFO     | chi2: 0.059122405512602824
[2026-01-09 02:50:16] 2026-01-09 10:49:45,022 | INFO     | current chi2=0.059122405512602824 (change=94.87534772493241 %)
[2026-01-09 02:50:16] 2026-01-09 10:49:45,022 | INFO     | sum of square deviations: 471562330.0
[2026-01-09 02:50:16] 2026-01-09 10:49:45,023 | INFO     | sum of deviations: -10307672945.0
[2026-01-09 02:50:16] 2026-01-09 10:49:45,023 | INFO     | mean x: 1767952271.0
[2026-01-09 02:50:16] 2026-01-09 10:49:45,023 | INFO     | mean y: 2388907.252173913
[2026-01-09 02:50:16] 2026-01-09 10:49:45,023 | INFO     | intersect: 38647277679.08856
[2026-01-09 02:50:16] 2026-01-09 10:49:45,023 | INFO     | chi2: 0.058323371219454266
[2026-01-09 02:50:16] 2026-01-09 10:49:45,023 | INFO     | current chi2=0.058323371219454266 (change=1.351491513616157 %)
[2026-01-09 02:50:16] 2026-01-09 10:49:45,023 | INFO     | left removable region: 20
[2026-01-09 02:50:16] 2026-01-09 10:49:45,023 | INFO     | sum of square deviations: 300842850.0
[2026-01-09 02:50:16] 2026-01-09 10:49:45,023 | INFO     | sum of deviations: -4972535780.0
[2026-01-09 02:50:16] 2026-01-09 10:49:45,023 | INFO     | mean x: 1767952393.0
[2026-01-09 02:50:16] 2026-01-09 10:49:45,023 | INFO     | mean y: 2376481.9494949495
[2026-01-09 02:50:16] 2026-01-09 10:49:45,023 | INFO     | intersect: 29224299261.663624
[2026-01-09 02:50:16] 2026-01-09 10:49:45,024 | INFO     | chi2: 0.04514430832431198
[2026-01-09 02:50:16] 2026-01-09 10:49:45,024 | INFO     | current memory leak: -16.53 B/s (using 99 data points, chi2=0.05)
[2026-01-09 02:50:16] 2026-01-09 10:49:45,024 | INFO     | could have reported an average CPU frequency of 3937 MHz (8 samples)
[2026-01-09 02:50:16] 2026-01-09 10:49:45,024 | INFO     | ..............................
[2026-01-09 02:50:16] 2026-01-09 10:49:45,024 | INFO     | . Timing measurements:
[2026-01-09 02:50:16] 2026-01-09 10:49:45,024 | INFO     | . get job = 0 s
[2026-01-09 02:50:16] 2026-01-09 10:49:45,024 | INFO     | . initial setup = 3 s
[2026-01-09 02:50:16] 2026-01-09 10:49:45,024 | INFO     | . payload setup = 4 s
[2026-01-09 02:50:16] 2026-01-09 10:49:45,024 | INFO     | . stage-in = 0 s
[2026-01-09 02:50:16] 2026-01-09 10:49:45,024 | INFO     | . payload execution = 7598 s
[2026-01-09 02:50:16] 2026-01-09 10:49:45,024 | INFO     | . stage-out = 0 s
[2026-01-09 02:50:16] 2026-01-09 10:49:45,024 | INFO     | . log creation = 0 s
[2026-01-09 02:50:16] 2026-01-09 10:49:45,024 | INFO     | ..............................
[2026-01-09 02:50:16] 2026-01-09 10:49:45,327 | INFO     | 
[2026-01-09 02:50:16] 2026-01-09 10:49:45,327 | INFO     | job summary report
[2026-01-09 02:50:16] 2026-01-09 10:49:45,327 | INFO     | --------------------------------------------------
[2026-01-09 02:50:16] 2026-01-09 10:49:45,327 | INFO     | PanDA job id: 6963146458
[2026-01-09 02:50:16] 2026-01-09 10:49:45,327 | INFO     | task id: 47898826
[2026-01-09 02:50:16] 2026-01-09 10:49:45,327 | INFO     | errors: (none)
[2026-01-09 02:50:16] 2026-01-09 10:49:45,327 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 02:50:16] 2026-01-09 10:49:45,327 | INFO     | pilot state: finished 
[2026-01-09 02:50:16] 2026-01-09 10:49:45,327 | INFO     | transexitcode: 0
[2026-01-09 02:50:16] 2026-01-09 10:49:45,327 | INFO     | exeerrorcode: 0
[2026-01-09 02:50:16] 2026-01-09 10:49:45,327 | INFO     | exeerrordiag: 
[2026-01-09 02:50:16] 2026-01-09 10:49:45,327 | INFO     | exitcode: 0
[2026-01-09 02:50:16] 2026-01-09 10:49:45,327 | INFO     | exitmsg: OK
[2026-01-09 02:50:16] 2026-01-09 10:49:45,327 | INFO     | cpuconsumptiontime: 29294 s
[2026-01-09 02:50:16] 2026-01-09 10:49:45,327 | INFO     | nevents: 400
[2026-01-09 02:50:16] 2026-01-09 10:49:45,327 | INFO     | neventsw: 0
[2026-01-09 02:50:16] 2026-01-09 10:49:45,327 | INFO     | pid: 225934
[2026-01-09 02:50:16] 2026-01-09 10:49:45,327 | INFO     | pgrp: 225934
[2026-01-09 02:50:16] 2026-01-09 10:49:45,327 | INFO     | corecount: 4
[2026-01-09 02:50:16] 2026-01-09 10:49:45,327 | INFO     | event service: False
[2026-01-09 02:50:16] 2026-01-09 10:49:45,327 | INFO     | sizes: {0: 2283975, 3: 2284237, 11: 2284265, 7605: 2311996, 7606: 2311995, 7607: 2321247, 7609: 2321385}
[2026-01-09 02:50:16] 2026-01-09 10:49:45,327 | INFO     | --------------------------------------------------
[2026-01-09 02:50:16] 2026-01-09 10:49:45,327 | INFO     | 
[2026-01-09 02:50:16] 2026-01-09 10:49:45,328 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-01-09 02:50:16] 2026-01-09 10:49:45,346 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 02:50:16] 2026-01-09 10:49:45,346 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 02:50:16] 2026-01-09 10:49:45,346 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 02:50:16] 2026-01-09 10:49:45,346 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 02:50:16] 2026-01-09 10:49:45,346 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 02:50:16] 2026-01-09 10:49:45,347 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 02:50:16] 2026-01-09 10:49:45,347 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 02:50:16] 2026-01-09 10:49:45,347 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 02:50:16] 2026-01-09 10:49:45,347 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 02:50:16] 2026-01-09 10:49:45,347 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 02:50:16] 2026-01-09 10:49:45,347 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 02:50:16] 2026-01-09 10:49:45,347 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 02:50:16] 2026-01-09 10:49:45,347 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 02:50:16] 2026-01-09 10:49:45,347 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 02:50:16] 2026-01-09 10:49:45,347 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 02:50:16] 2026-01-09 10:49:45,347 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 02:50:16] 2026-01-09 10:49:45,347 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 02:50:16] 2026-01-09 10:49:45,347 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 02:50:16] 2026-01-09 10:49:45,347 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 02:50:16] 2026-01-09 10:49:45,347 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 02:50:16] 2026-01-09 10:49:45,347 | INFO     | job 6963146458 has completed (purged errors)
[2026-01-09 02:50:16] 2026-01-09 10:49:45,347 | INFO     | overall cleanup function is called
[2026-01-09 02:50:16] 2026-01-09 10:49:46,354 | INFO     | --- collectZombieJob: --- 10, [225934]
[2026-01-09 02:50:16] 2026-01-09 10:49:46,354 | INFO     | zombie collector waiting for pid 225934
[2026-01-09 02:50:16] 2026-01-09 10:49:46,354 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 02:50:16] 2026-01-09 10:49:46,355 | INFO     | collected zombie processes
[2026-01-09 02:50:16] 2026-01-09 10:49:46,355 | INFO     | will attempt to kill all subprocesses of pid=225934
[2026-01-09 02:50:16] 2026-01-09 10:49:46,431 | INFO     | process IDs to be killed: [225934] (in reverse order)
[2026-01-09 02:50:16] 2026-01-09 10:49:46,477 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 02:50:16] 2026-01-09 10:49:46,477 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 02:50:16] 2026-01-09 10:49:46,480 | INFO     | did not find any defunct processes belonging to 225934
[2026-01-09 02:50:16] 2026-01-09 10:49:46,484 | INFO     | did not find any defunct processes belonging to 225934
[2026-01-09 02:50:16] 2026-01-09 10:49:46,484 | INFO     | ready for new job
[2026-01-09 02:50:16] 2026-01-09 10:49:46,484 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 02:50:16] 2026-01-09 10:49:46,485 | INFO     | ***************************************
[2026-01-09 02:50:16] 2026-01-09 10:49:46,486 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 02:50:16] 2026-01-09 10:49:46,486 | INFO     | ***************************************
[2026-01-09 02:50:16] 2026-01-09 10:49:46,486 | INFO     | 
[2026-01-09 02:50:16] 2026-01-09 10:49:46,487 | INFO     | architecture information:
[2026-01-09 02:50:16] 2026-01-09 10:49:46,487 | INFO     | executing command: cat /etc/os-release
[2026-01-09 02:50:16] 2026-01-09 10:49:46,498 | INFO     | cat /etc/os-release:
[2026-01-09 02:50:16] NAME="CentOS Linux"
[2026-01-09 02:50:16] VERSION="7 (Core)"
[2026-01-09 02:50:16] ID="centos"
[2026-01-09 02:50:16] ID_LIKE="rhel fedora"
[2026-01-09 02:50:16] VERSION_ID="7"
[2026-01-09 02:50:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 02:50:16] ANSI_COLOR="0;31"
[2026-01-09 02:50:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 02:50:16] HOME_URL="https://www.centos.org/"
[2026-01-09 02:50:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 02:50:16] 
[2026-01-09 02:50:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 02:50:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 02:50:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 02:50:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 02:50:16] 
[2026-01-09 02:50:16] 2026-01-09 10:49:46,498 | INFO     | ***************************************
[2026-01-09 02:50:16] 2026-01-09 10:49:47,000 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-01-09 02:50:16] 2026-01-09 10:49:47,014 | INFO     | sufficient remaining disk space (115723993088 B)
[2026-01-09 02:50:16] 2026-01-09 10:49:47,014 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 02:50:16] 2026-01-09 10:49:47,015 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 02:50:16] 2026-01-09 10:49:47,015 | INFO     | update_server=False
[2026-01-09 02:50:16] 2026-01-09 10:49:47,015 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 02:50:16] 2026-01-09 10:49:47,015 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:50:16] 2026-01-09 10:49:47,015 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:50:16] 2026-01-09 10:49:47,015 | INFO     | aborting loop
[2026-01-09 02:50:16] 2026-01-09 10:49:47,063 | INFO     | all data control threads have been joined
[2026-01-09 02:50:16] 2026-01-09 10:49:47,612 | INFO     | job.realtimelogging is not enabled
[2026-01-09 02:50:16] 2026-01-09 10:49:47,792 | INFO     | all job control threads have been joined
[2026-01-09 02:50:16] 2026-01-09 10:49:48,020 | INFO     | [job] queue monitor thread has finished
[2026-01-09 02:50:16] 2026-01-09 10:49:48,020 | INFO     | [job] retrieve thread has finished
[2026-01-09 02:50:16] 2026-01-09 10:49:48,020 | INFO     | [job] job monitor thread has finished
[2026-01-09 02:50:16] 2026-01-09 10:49:48,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 02:50:16] 2026-01-09 10:49:48,068 | INFO     | [data] control thread has finished
[2026-01-09 02:50:16] 2026-01-09 10:49:48,101 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 02:50:16] 2026-01-09 10:49:48,139 | INFO     | [payload] failed_post thread has finished
[2026-01-09 02:50:16] 2026-01-09 10:49:48,153 | INFO     | all payload control threads have been joined
[2026-01-09 02:50:16] 2026-01-09 10:49:48,181 | INFO     | [data] copytool_in thread has finished
[2026-01-09 02:50:16] 2026-01-09 10:49:48,617 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 02:50:16] 2026-01-09 10:49:48,677 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 02:50:16] 2026-01-09 10:49:48,797 | INFO     | [job] control thread has finished
[2026-01-09 02:50:16] 2026-01-09 10:49:48,834 | INFO     | [payload] validate_post thread has finished
[2026-01-09 02:50:16] 2026-01-09 10:49:49,159 | INFO     | [payload] control thread has finished
[2026-01-09 02:50:16] 2026-01-09 10:49:49,294 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 02:50:16] 2026-01-09 10:49:49,331 | INFO     | [job] validate thread has finished
[2026-01-09 02:50:16] 2026-01-09 10:49:49,425 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 02:50:16] 2026-01-09 10:49:50,067 | INFO     | [data] copytool_out thread has finished
[2026-01-09 02:50:16] 2026-01-09 10:49:52,683 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 02:50:16] 2026-01-09 10:49:53,745 | INFO     | [monitor] cgroup control has ended
[2026-01-09 02:50:16] 2026-01-09 10:49:53,856 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124678282360640)>', '<ExcThread(monitor, started 124677531891456)>']
[2026-01-09 02:50:16] 2026-01-09 10:49:58,882 | INFO     | all workflow threads have been joined
[2026-01-09 02:50:16] 2026-01-09 10:49:58,882 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 02:50:16] 2026-01-09 10:49:58,882 | INFO     | traces error code: 0
[2026-01-09 02:50:16] 2026-01-09 10:49:58,882 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 02:50:16] 2026-01-09 10:50:16,837 | INFO     | PID=219322 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 02:50:16] 2026-01-09 10:50:16,837 | INFO     | .. there are 3 such processes running
[2026-01-09 02:50:16] 2026-01-09 10:50:16,837 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 02:50:16] 2026-01-09 10:50:16,838 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 02:50:16] 2026-01-09 10:50:16,838 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 02:50:16] 2026-01-09 10:50:16,838 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 02:50:16] 2026-01-09 10:50:16,838 | INFO     | [monitor] control thread has ended
[2026-01-09 02:50:16] 2026-01-09 10:50:16,911 [wrapper] ==== pilot stdout END ====
[2026-01-09 02:50:16] 2026-01-09 10:50:16,915 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 02:50:16] 2026-01-09 10:50:16,916 [wrapper] pilotpid: 219322
[2026-01-09 02:50:16] 2026-01-09 10:50:16,918 [wrapper] Pilot exit status: 0
[2026-01-09 02:50:16] 2026-01-09 10:50:16,924 [wrapper] pandaids: 6963146458
[2026-01-09 02:50:16] 2026-01-09 10:50:16,947 [wrapper] cleanup supervisor_pilot  329125 219323
[2026-01-09 02:50:16] 2026-01-09 10:50:16,949 [wrapper] Test setup, not cleaning
[2026-01-09 02:50:16] 2026-01-09 10:50:16,951 [wrapper] apfmon messages muted
[2026-01-09 02:50:16] 2026-01-09 10:50:16,953 [wrapper] ==== wrapper stdout END ====
[2026-01-09 02:50:16] 2026-01-09 10:50:16,955 [wrapper] ==== wrapper stderr END ====
[2026-01-09 02:50:16]  *** Error codes and diagnostics ***
[2026-01-09 02:50:16]     "exeErrorCode": 0,
[2026-01-09 02:50:16]     "exeErrorDiag": "",
[2026-01-09 02:50:16]     "pilotErrorCode": 0,
[2026-01-09 02:50:16]     "pilotErrorDiag": "",
[2026-01-09 02:50:16]  *** Listing of results directory ***
[2026-01-09 02:50:16] total 436268
[2026-01-09 02:50:16] -rw-r--r-- 1 boinc boinc    579449 Jan  8 07:02 pilot3.tar.gz
[2026-01-09 02:50:16] -rwx------ 1 boinc boinc     36322 Jan  8 07:03 runpilot2-wrapper.sh
[2026-01-09 02:50:16] -rw-r--r-- 1 boinc boinc      5112 Jan  8 07:04 queuedata.json
[2026-01-09 02:50:16] -rw-r--r-- 1 boinc boinc       100 Jan  9 00:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 02:50:16] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 00:42 run_atlas
[2026-01-09 02:50:16] -rw-r--r-- 1 boinc boinc       105 Jan  9 00:42 job.xml
[2026-01-09 02:50:16] -rw-r--r-- 2 boinc boinc 223491059 Jan  9 00:42 EVNT.47898824._001058.pool.root.1
[2026-01-09 02:50:16] -rw-r--r-- 2 boinc boinc    592396 Jan  9 00:42 input.tar.gz
[2026-01-09 02:50:16] drwxrwx--x 2 boinc boinc      4096 Jan  9 00:42 shared
[2026-01-09 02:50:16] -rw-r--r-- 1 boinc boinc         0 Jan  9 00:42 boinc_setup_complete
[2026-01-09 02:50:16] -rw-r--r-- 2 boinc boinc     15847 Jan  9 00:42 start_atlas.sh
[2026-01-09 02:50:16] -rw-r--r-- 1 boinc boinc      7245 Jan  9 00:42 init_data.xml
[2026-01-09 02:50:16] -rw-r--r-- 1 boinc boinc         0 Jan  9 00:42 boinc_lockfile
[2026-01-09 02:50:16] -rw-r--r-- 1 boinc boinc      2518 Jan  9 00:42 pandaJob.out
[2026-01-09 02:50:16] -rw------- 1 boinc boinc    989759 Jan  9 00:42 agis_schedconf.cvmfs.json
[2026-01-09 02:50:16] -rw------- 1 boinc boinc   1516240 Jan  9 00:42 agis_ddmendpoints.agis.ALL.json
[2026-01-09 02:50:16] drwx------ 5 boinc boinc      4096 Jan  9 00:42 pilot3
[2026-01-09 02:50:16] -rw------- 1 boinc boinc 216468972 Jan  9 02:49 HITS.47898826._026838.pool.root.1
[2026-01-09 02:50:16] -rw-r--r-- 1 boinc boinc       529 Jan  9 02:49 boinc_task_state.xml
[2026-01-09 02:50:16] -rw------- 1 boinc boinc      1026 Jan  9 02:49 memory_monitor_summary.json
[2026-01-09 02:50:16] -rw------- 1 boinc boinc    315206 Jan  9 02:49 log.47898826._026838.job.log.tgz.1
[2026-01-09 02:50:16] -rw------- 1 boinc boinc      7770 Jan  9 02:49 heartbeat.json
[2026-01-09 02:50:16] -rw-r--r-- 1 boinc boinc        27 Jan  9 02:49 wrapper_checkpoint.txt
[2026-01-09 02:50:16] -rw-r--r-- 1 boinc boinc      8192 Jan  9 02:49 boinc_mmap_file
[2026-01-09 02:50:16] -rw------- 1 boinc boinc        95 Jan  9 02:50 pilot_heartbeat.json
[2026-01-09 02:50:16] -rw------- 1 boinc boinc       821 Jan  9 02:50 pilotlog.txt
[2026-01-09 02:50:16] -rw------- 1 boinc boinc   1120332 Jan  9 02:50 log.47898826._026838.job.log.1
[2026-01-09 02:50:16] -rw------- 1 boinc boinc       357 Jan  9 02:50 output.list
[2026-01-09 02:50:16] -rw-r--r-- 1 boinc boinc       620 Jan  9 02:50 runtime_log
[2026-01-09 02:50:16] -rw------- 1 boinc boinc   1454080 Jan  9 02:50 result.tar.gz
[2026-01-09 02:50:16] -rw------- 1 boinc boinc       650 Jan  9 02:50 9FMMDmFj6x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwTfKDmVvFian.diag
[2026-01-09 02:50:16] -rw-r--r-- 1 boinc boinc      8908 Jan  9 02:50 runtime_log.err
[2026-01-09 02:50:16] -rw-r--r-- 1 boinc boinc     21419 Jan  9 02:50 stderr.txt
[2026-01-09 02:50:17] HITS file was successfully produced:
[2026-01-09 02:50:17] -rw------- 1 boinc boinc 216468972 Jan  9 02:49 shared/HITS.pool.root.1
[2026-01-09 02:50:17]  *** Contents of shared directory: ***
[2026-01-09 02:50:17] total 431676
[2026-01-09 02:50:17] -rw-r--r-- 2 boinc boinc 223491059 Jan  9 00:42 ATLAS.root_0
[2026-01-09 02:50:17] -rw-r--r-- 2 boinc boinc    592396 Jan  9 00:42 input.tar.gz
[2026-01-09 02:50:17] -rw-r--r-- 2 boinc boinc     15847 Jan  9 00:42 start_atlas.sh
[2026-01-09 02:50:17] -rw------- 1 boinc boinc 216468972 Jan  9 02:49 HITS.pool.root.1
[2026-01-09 02:50:17] -rw------- 1 boinc boinc   1454080 Jan  9 02:50 result.tar.gz
02:50:18 (215363): run_atlas exited; CPU time 29359.550932
02:50:18 (215363): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN