Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:20:07 (16445): wrapper (7.7.26015): starting
14:20:07 (16445): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 14:20:07] Arguments: --nthreads 8
[2026-01-09 14:20:07] Threads: 8
[2026-01-09 14:20:07] Checking for CVMFS
[2026-01-09 14:20:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:20:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:20:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:20:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:20:08] 2.11.2.0 27806 35449 96136 154945 3 56 13989573 25165825 0 130560 0 18033109 99.821 10684039 3934 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 14:20:08] CVMFS is ok
[2026-01-09 14:20:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:20:08] Checking for apptainer binary...
[2026-01-09 14:20:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:20:08] Running /usr/bin/apptainer --version
[2026-01-09 14:20:08] apptainer version 1.3.2-1.el7
[2026-01-09 14:20:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:20:09] cg-vwn467.simple-grid.lan
[2026-01-09 14:20:09] apptainer works
[2026-01-09 14:20:09] Set ATHENA_PROC_NUMBER=8
[2026-01-09 14:20:09] Set ATHENA_CORE_NUMBER=8
[2026-01-09 14:20:09] Starting ATLAS job with PandaID=6963153179
[2026-01-09 14:20:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:59:48]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:59:48] 2026-01-09 15:59:08,764 | INFO     | time since job start (9522s) is within the limit (349056.0s)
[2026-01-09 16:59:48] 2026-01-09 15:59:09,431 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 16:59:48] 2026-01-09 15:59:09,432 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2026-01-09 16:59:48] 2026-01-09 15:59:09,434 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6963153179/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:59:48] 2026-01-09 15:59:09,434 | INFO     | extracted standard info from prmon json
[2026-01-09 16:59:48] 2026-01-09 15:59:09,434 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 16:59:48] 2026-01-09 15:59:09,435 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 16:59:48] 2026-01-09 15:59:09,435 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 16:59:48] 2026-01-09 15:59:09,435 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 16:59:48] 2026-01-09 15:59:09,438 | INFO     | fitting pss+swap vs Time
[2026-01-09 16:59:48] 2026-01-09 15:59:09,439 | INFO     | sum of square deviations: 1177156955.0
[2026-01-09 16:59:48] 2026-01-09 15:59:09,440 | INFO     | sum of deviations: -21588875695.000008
[2026-01-09 16:59:48] 2026-01-09 15:59:09,440 | INFO     | mean x: 1767969589.5
[2026-01-09 16:59:48] 2026-01-09 15:59:09,440 | INFO     | mean y: 2553276.6923076925
[2026-01-09 16:59:48] 2026-01-09 15:59:09,440 | INFO     | intersect: 32426840911.51811
[2026-01-09 16:59:48] 2026-01-09 15:59:09,441 | INFO     | chi2: 2.498224142592571
[2026-01-09 16:59:48] 2026-01-09 15:59:09,441 | INFO     | sum of square deviations: 1067554900.0
[2026-01-09 16:59:48] 2026-01-09 15:59:09,442 | INFO     | sum of deviations: -9991818361.0
[2026-01-09 16:59:48] 2026-01-09 15:59:09,442 | INFO     | mean x: 1767969437.0
[2026-01-09 16:59:48] 2026-01-09 15:59:09,442 | INFO     | mean y: 2569040.536423841
[2026-01-09 16:59:48] 2026-01-09 15:59:09,443 | INFO     | intersect: 16549942372.1594
[2026-01-09 16:59:48] 2026-01-09 15:59:09,443 | INFO     | chi2: 1.739732908530573
[2026-01-09 16:59:48] 2026-01-09 15:59:09,443 | INFO     | current chi2=1.739732908530573 (change=30.361216238782397 %)
[2026-01-09 16:59:48] 2026-01-09 15:59:09,443 | INFO     | sum of square deviations: 964976232.5
[2026-01-09 16:59:48] 2026-01-09 15:59:09,444 | INFO     | sum of deviations: -8911256827.499998
[2026-01-09 16:59:48] 2026-01-09 15:59:09,444 | INFO     | mean x: 1767969284.5
[2026-01-09 16:59:48] 2026-01-09 15:59:09,445 | INFO     | mean y: 2570647.5547945206
[2026-01-09 16:59:48] 2026-01-09 15:59:09,445 | INFO     | intersect: 16329219767.703886
[2026-01-09 16:59:48] 2026-01-09 15:59:09,445 | INFO     | chi2: 1.7401512522872704
[2026-01-09 16:59:48] 2026-01-09 15:59:09,445 | INFO     | current chi2=1.7401512522872704 (change=-0.02404643578597958 %)
[2026-01-09 16:59:48] 2026-01-09 15:59:09,445 | INFO     | right removable region: 145
[2026-01-09 16:59:48] 2026-01-09 15:59:09,446 | INFO     | sum of square deviations: 1067554900.0
[2026-01-09 16:59:48] 2026-01-09 15:59:09,447 | INFO     | sum of deviations: -46257020227.00001
[2026-01-09 16:59:48] 2026-01-09 15:59:09,447 | INFO     | mean x: 1767969742.0
[2026-01-09 16:59:48] 2026-01-09 15:59:09,447 | INFO     | mean y: 2587106.0662251655
[2026-01-09 16:59:48] 2026-01-09 15:59:09,447 | INFO     | intersect: 76608494789.5193
[2026-01-09 16:59:48] 2026-01-09 15:59:09,447 | INFO     | chi2: 0.9576052176157572
[2026-01-09 16:59:48] 2026-01-09 15:59:09,448 | INFO     | current chi2=0.9576052176157572 (change=61.6685628287145 %)
[2026-01-09 16:59:48] 2026-01-09 15:59:09,448 | INFO     | sum of square deviations: 964976232.5
[2026-01-09 16:59:48] 2026-01-09 15:59:09,449 | INFO     | sum of deviations: -46162965730.0
[2026-01-09 16:59:48] 2026-01-09 15:59:09,449 | INFO     | mean x: 1767969894.5
[2026-01-09 16:59:48] 2026-01-09 15:59:09,449 | INFO     | mean y: 2586883.6301369863
[2026-01-09 16:59:48] 2026-01-09 15:59:09,449 | INFO     | intersect: 84579523498.98373
[2026-01-09 16:59:48] 2026-01-09 15:59:09,450 | INFO     | chi2: 0.9261723791658834
[2026-01-09 16:59:48] 2026-01-09 15:59:09,450 | INFO     | current chi2=0.9261723791658834 (change=3.282442270744438 %)
[2026-01-09 16:59:48] 2026-01-09 15:59:09,450 | INFO     | left removable region: 20
[2026-01-09 16:59:48] 2026-01-09 15:59:09,450 | INFO     | sum of square deviations: 605592750.0
[2026-01-09 16:59:48] 2026-01-09 15:59:09,451 | INFO     | sum of deviations: -25871737972.0
[2026-01-09 16:59:48] 2026-01-09 15:59:09,451 | INFO     | mean x: 1767969864.0
[2026-01-09 16:59:48] 2026-01-09 15:59:09,451 | INFO     | mean y: 2595899.672
[2026-01-09 16:59:48] 2026-01-09 15:59:09,451 | INFO     | intersect: 75532649824.1955
[2026-01-09 16:59:48] 2026-01-09 15:59:09,452 | INFO     | chi2: 0.1241380777640448
[2026-01-09 16:59:48] 2026-01-09 15:59:09,452 | INFO     | current memory leak: -42.72 B/s (using 125 data points, chi2=0.12)
[2026-01-09 16:59:48] 2026-01-09 15:59:09,452 | INFO     | could have reported an average CPU frequency of 2250 MHz (8 samples)
[2026-01-09 16:59:48] 2026-01-09 15:59:09,453 | INFO     | ..............................
[2026-01-09 16:59:48] 2026-01-09 15:59:09,453 | INFO     | . Timing measurements:
[2026-01-09 16:59:48] 2026-01-09 15:59:09,453 | INFO     | . get job = 0 s
[2026-01-09 16:59:48] 2026-01-09 15:59:09,453 | INFO     | . initial setup = 2 s
[2026-01-09 16:59:48] 2026-01-09 15:59:09,453 | INFO     | . payload setup = 8 s
[2026-01-09 16:59:48] 2026-01-09 15:59:09,453 | INFO     | . stage-in = 0 s
[2026-01-09 16:59:48] 2026-01-09 15:59:09,453 | INFO     | . payload execution = 9480 s
[2026-01-09 16:59:48] 2026-01-09 15:59:09,453 | INFO     | . stage-out = 0 s
[2026-01-09 16:59:48] 2026-01-09 15:59:09,454 | INFO     | . log creation = 0 s
[2026-01-09 16:59:48] 2026-01-09 15:59:09,454 | INFO     | ..............................
[2026-01-09 16:59:48] 2026-01-09 15:59:09,565 | INFO     | 
[2026-01-09 16:59:48] 2026-01-09 15:59:09,565 | INFO     | job summary report
[2026-01-09 16:59:48] 2026-01-09 15:59:09,566 | INFO     | --------------------------------------------------
[2026-01-09 16:59:48] 2026-01-09 15:59:09,566 | INFO     | PanDA job id: 6963153179
[2026-01-09 16:59:48] 2026-01-09 15:59:09,566 | INFO     | task id: 47898826
[2026-01-09 16:59:48] 2026-01-09 15:59:09,566 | INFO     | errors: (none)
[2026-01-09 16:59:48] 2026-01-09 15:59:09,566 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 16:59:48] 2026-01-09 15:59:09,566 | INFO     | pilot state: finished 
[2026-01-09 16:59:48] 2026-01-09 15:59:09,566 | INFO     | transexitcode: 0
[2026-01-09 16:59:48] 2026-01-09 15:59:09,566 | INFO     | exeerrorcode: 0
[2026-01-09 16:59:48] 2026-01-09 15:59:09,566 | INFO     | exeerrordiag: 
[2026-01-09 16:59:48] 2026-01-09 15:59:09,567 | INFO     | exitcode: 0
[2026-01-09 16:59:48] 2026-01-09 15:59:09,567 | INFO     | exitmsg: OK
[2026-01-09 16:59:48] 2026-01-09 15:59:09,567 | INFO     | cpuconsumptiontime: 71033 s
[2026-01-09 16:59:48] 2026-01-09 15:59:09,567 | INFO     | nevents: 400
[2026-01-09 16:59:48] 2026-01-09 15:59:09,567 | INFO     | neventsw: 0
[2026-01-09 16:59:48] 2026-01-09 15:59:09,567 | INFO     | pid: 26590
[2026-01-09 16:59:48] 2026-01-09 15:59:09,567 | INFO     | pgrp: 26590
[2026-01-09 16:59:48] 2026-01-09 15:59:09,567 | INFO     | corecount: 8
[2026-01-09 16:59:48] 2026-01-09 15:59:09,567 | INFO     | event service: False
[2026-01-09 16:59:48] 2026-01-09 15:59:09,567 | INFO     | sizes: {0: 2283798, 1: 2283997, 7: 2284259, 12: 2284287, 9492: 2312581, 9494: 2321579, 9496: 2321763, 9506: 2321957}
[2026-01-09 16:59:48] 2026-01-09 15:59:09,568 | INFO     | --------------------------------------------------
[2026-01-09 16:59:48] 2026-01-09 15:59:09,568 | INFO     | 
[2026-01-09 16:59:48] 2026-01-09 15:59:09,568 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-09 16:59:48] 2026-01-09 15:59:09,591 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 16:59:48] 2026-01-09 15:59:09,592 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 16:59:48] 2026-01-09 15:59:09,592 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 16:59:48] 2026-01-09 15:59:09,592 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 16:59:48] 2026-01-09 15:59:09,592 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 16:59:48] 2026-01-09 15:59:09,592 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 16:59:48] 2026-01-09 15:59:09,592 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 16:59:48] 2026-01-09 15:59:09,592 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 16:59:48] 2026-01-09 15:59:09,593 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 16:59:48] 2026-01-09 15:59:09,593 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 16:59:48] 2026-01-09 15:59:09,593 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 16:59:48] 2026-01-09 15:59:09,593 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 16:59:48] 2026-01-09 15:59:09,593 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 16:59:48] 2026-01-09 15:59:09,593 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 16:59:48] 2026-01-09 15:59:09,593 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 16:59:48] 2026-01-09 15:59:09,593 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 16:59:48] 2026-01-09 15:59:09,593 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 16:59:48] 2026-01-09 15:59:09,594 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 16:59:48] 2026-01-09 15:59:09,594 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 16:59:48] 2026-01-09 15:59:09,594 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 16:59:48] 2026-01-09 15:59:09,594 | INFO     | job 6963153179 has completed (purged errors)
[2026-01-09 16:59:48] 2026-01-09 15:59:09,594 | INFO     | overall cleanup function is called
[2026-01-09 16:59:48] 2026-01-09 15:59:10,599 | INFO     | --- collectZombieJob: --- 10, [26590]
[2026-01-09 16:59:48] 2026-01-09 15:59:10,599 | INFO     | zombie collector waiting for pid 26590
[2026-01-09 16:59:48] 2026-01-09 15:59:10,599 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 16:59:48] 2026-01-09 15:59:10,599 | INFO     | collected zombie processes
[2026-01-09 16:59:48] 2026-01-09 15:59:10,600 | INFO     | will attempt to kill all subprocesses of pid=26590
[2026-01-09 16:59:48] 2026-01-09 15:59:10,660 | INFO     | process IDs to be killed: [26590] (in reverse order)
[2026-01-09 16:59:48] 2026-01-09 15:59:10,705 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 16:59:48] 2026-01-09 15:59:10,706 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 16:59:48] 2026-01-09 15:59:10,707 | INFO     | did not find any defunct processes belonging to 26590
[2026-01-09 16:59:48] 2026-01-09 15:59:10,709 | INFO     | did not find any defunct processes belonging to 26590
[2026-01-09 16:59:48] 2026-01-09 15:59:10,709 | INFO     | ready for new job
[2026-01-09 16:59:48] 2026-01-09 15:59:10,709 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 16:59:48] 2026-01-09 15:59:10,711 | INFO     | ***************************************
[2026-01-09 16:59:48] 2026-01-09 15:59:10,711 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 16:59:48] 2026-01-09 15:59:10,711 | INFO     | ***************************************
[2026-01-09 16:59:48] 2026-01-09 15:59:10,711 | INFO     | 
[2026-01-09 16:59:48] 2026-01-09 15:59:10,712 | INFO     | pilot is running in a VM
[2026-01-09 16:59:48] 2026-01-09 15:59:10,712 | INFO     | architecture information:
[2026-01-09 16:59:48] 2026-01-09 15:59:10,713 | INFO     | executing command: cat /etc/os-release
[2026-01-09 16:59:48] 2026-01-09 15:59:10,736 | INFO     | cat /etc/os-release:
[2026-01-09 16:59:48] NAME="CentOS Linux"
[2026-01-09 16:59:48] VERSION="7 (Core)"
[2026-01-09 16:59:48] ID="centos"
[2026-01-09 16:59:48] ID_LIKE="rhel fedora"
[2026-01-09 16:59:48] VERSION_ID="7"
[2026-01-09 16:59:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:59:48] ANSI_COLOR="0;31"
[2026-01-09 16:59:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:59:48] HOME_URL="https://www.centos.org/"
[2026-01-09 16:59:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:59:48] 
[2026-01-09 16:59:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:59:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:59:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:59:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:59:48] 
[2026-01-09 16:59:48] 2026-01-09 15:59:10,736 | INFO     | ***************************************
[2026-01-09 16:59:48] 2026-01-09 15:59:11,240 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-09 16:59:48] 2026-01-09 15:59:11,259 | INFO     | sufficient remaining disk space (498032705536 B)
[2026-01-09 16:59:48] 2026-01-09 15:59:11,259 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:59:48] 2026-01-09 15:59:11,260 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:59:48] 2026-01-09 15:59:11,260 | INFO     | update_server=False
[2026-01-09 16:59:48] 2026-01-09 15:59:11,260 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:59:48] 2026-01-09 15:59:11,260 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:59:48] 2026-01-09 15:59:11,260 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:59:48] 2026-01-09 15:59:11,261 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:59:48] 2026-01-09 15:59:11,424 | INFO     | all data control threads have been joined
[2026-01-09 16:59:48] 2026-01-09 15:59:11,724 | INFO     | all payload control threads have been joined
[2026-01-09 16:59:48] 2026-01-09 15:59:11,843 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:59:48] 2026-01-09 15:59:11,843 | INFO     | aborting loop
[2026-01-09 16:59:48] 2026-01-09 15:59:12,264 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:59:48] 2026-01-09 15:59:12,264 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:59:48] 2026-01-09 15:59:12,327 | INFO     | all job control threads have been joined
[2026-01-09 16:59:48] 2026-01-09 15:59:12,430 | INFO     | [data] control thread has finished
[2026-01-09 16:59:48] 2026-01-09 15:59:12,469 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:59:48] 2026-01-09 15:59:12,721 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:59:48] 2026-01-09 15:59:12,730 | INFO     | [payload] control thread has finished
[2026-01-09 16:59:48] 2026-01-09 15:59:12,849 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:59:48] 2026-01-09 15:59:12,956 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:59:48] 2026-01-09 15:59:12,960 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:59:48] 2026-01-09 15:59:13,135 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:59:48] 2026-01-09 15:59:13,264 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:59:48] 2026-01-09 15:59:13,333 | INFO     | [job] control thread has finished
[2026-01-09 16:59:48] 2026-01-09 15:59:13,583 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:59:48] 2026-01-09 15:59:13,753 | INFO     | [job] validate thread has finished
[2026-01-09 16:59:48] 2026-01-09 15:59:15,268 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:59:48] 2026-01-09 15:59:21,814 | INFO     | job.realtimelogging is not enabled
[2026-01-09 16:59:48] 2026-01-09 15:59:22,820 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:59:48] 2026-01-09 15:59:41,946 | INFO     | PID=20167 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 16:59:48] 2026-01-09 15:59:41,947 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:59:48] 2026-01-09 15:59:41,948 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:59:48] 2026-01-09 15:59:41,948 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:59:48] 2026-01-09 15:59:42,164 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:59:48] 2026-01-09 15:59:42,726 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139982856869696)>', '<ExcThread(monitor, started 139981976762112)>']
[2026-01-09 16:59:48] 2026-01-09 15:59:42,953 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:59:48] 2026-01-09 15:59:42,953 | INFO     | [monitor] control thread has ended
[2026-01-09 16:59:48] 2026-01-09 15:59:47,752 | INFO     | all workflow threads have been joined
[2026-01-09 16:59:48] 2026-01-09 15:59:47,752 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:59:48] 2026-01-09 15:59:47,752 | INFO     | traces error code: 0
[2026-01-09 16:59:48] 2026-01-09 15:59:47,753 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:59:48] 2026-01-09 15:59:47,901 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:59:48] 2026-01-09 15:59:47,924 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:59:48] 2026-01-09 15:59:47,931 [wrapper] pilotpid: 20167
[2026-01-09 16:59:48] 2026-01-09 15:59:47,939 [wrapper] Pilot exit status: 0
[2026-01-09 16:59:48] 2026-01-09 15:59:47,967 [wrapper] pandaids: 6963153179
[2026-01-09 16:59:48] 2026-01-09 15:59:48,018 [wrapper] cleanup supervisor_pilot 10733 20168
[2026-01-09 16:59:48] 2026-01-09 15:59:48,030 [wrapper] Test setup, not cleaning
[2026-01-09 16:59:48] 2026-01-09 15:59:48,036 [wrapper] apfmon messages muted
[2026-01-09 16:59:48] 2026-01-09 15:59:48,041 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:59:48] 2026-01-09 15:59:48,047 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:59:48]  *** Error codes and diagnostics ***
[2026-01-09 16:59:48]     "exeErrorCode": 0,
[2026-01-09 16:59:48]     "exeErrorDiag": "",
[2026-01-09 16:59:48]     "pilotErrorCode": 0,
[2026-01-09 16:59:48]     "pilotErrorDiag": "",
[2026-01-09 16:59:48]  *** Listing of results directory ***
[2026-01-09 16:59:48] total 441312
[2026-01-09 16:59:48] -rw-r--r--. 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 16:59:48] -rwx------. 1 boinc boinc     36322 Jan  8 20:09 runpilot2-wrapper.sh
[2026-01-09 16:59:48] -rw-r--r--. 1 boinc boinc      5112 Jan  8 20:11 queuedata.json
[2026-01-09 16:59:48] -rw-r--r--. 1 boinc boinc       100 Jan  9 14:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:59:48] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 14:20 run_atlas
[2026-01-09 16:59:48] -rw-r--r--. 1 boinc boinc       105 Jan  9 14:20 job.xml
[2026-01-09 16:59:48] -rw-r--r--. 1 boinc boinc      6389 Jan  9 14:20 init_data.xml
[2026-01-09 16:59:48] -rw-r--r--. 2 boinc boinc 221578609 Jan  9 14:20 EVNT.47898824._001156.pool.root.1
[2026-01-09 16:59:48] -rw-r--r--. 2 boinc boinc     15847 Jan  9 14:20 start_atlas.sh
[2026-01-09 16:59:48] drwxrwx--x. 2 boinc boinc        68 Jan  9 14:20 shared
[2026-01-09 16:59:48] -rw-r--r--. 2 boinc boinc    592389 Jan  9 14:20 input.tar.gz
[2026-01-09 16:59:48] -rw-r--r--. 1 boinc boinc         0 Jan  9 14:20 boinc_lockfile
[2026-01-09 16:59:48] -rw-r--r--. 1 boinc boinc      2519 Jan  9 14:20 pandaJob.out
[2026-01-09 16:59:48] -rw-------. 1 boinc boinc    989377 Jan  9 14:20 agis_schedconf.cvmfs.json
[2026-01-09 16:59:48] -rw-------. 1 boinc boinc   1516240 Jan  9 14:20 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:59:48] drwx------. 5 boinc boinc      4096 Jan  9 14:20 pilot3
[2026-01-09 16:59:48] -rw-------. 1 boinc boinc 223121785 Jan  9 16:58 HITS.47898826._029874.pool.root.1
[2026-01-09 16:59:48] -rw-r--r--. 1 boinc boinc       529 Jan  9 16:58 boinc_task_state.xml
[2026-01-09 16:59:48] -rw-------. 1 boinc boinc      1015 Jan  9 16:58 memory_monitor_summary.json
[2026-01-09 16:59:48] -rw-------. 1 boinc boinc    374094 Jan  9 16:58 log.47898826._029874.job.log.tgz.1
[2026-01-09 16:59:48] -rw-------. 1 boinc boinc      7774 Jan  9 16:59 heartbeat.json
[2026-01-09 16:59:48] -rw-r--r--. 1 boinc boinc        27 Jan  9 16:59 wrapper_checkpoint.txt
[2026-01-09 16:59:48] -rw-r--r--. 1 boinc boinc      8192 Jan  9 16:59 boinc_mmap_file
[2026-01-09 16:59:48] -rw-------. 1 boinc boinc        95 Jan  9 16:59 pilot_heartbeat.json
[2026-01-09 16:59:48] -rw-------. 1 boinc boinc      4881 Jan  9 16:59 pilotlog.txt
[2026-01-09 16:59:48] -rw-------. 1 boinc boinc   1277648 Jan  9 16:59 log.47898826._029874.job.log.1
[2026-01-09 16:59:48] -rw-------. 1 boinc boinc       357 Jan  9 16:59 output.list
[2026-01-09 16:59:48] -rw-r--r--. 1 boinc boinc       620 Jan  9 16:59 runtime_log
[2026-01-09 16:59:48] -rw-------. 1 boinc boinc   1669120 Jan  9 16:59 result.tar.gz
[2026-01-09 16:59:48] -rw-r--r--. 1 boinc boinc      8816 Jan  9 16:59 runtime_log.err
[2026-01-09 16:59:48] -rw-------. 1 boinc boinc       652 Jan  9 16:59 8fzLDm0YAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmm2fKDmJQcBQo.diag
[2026-01-09 16:59:48] -rw-r--r--. 1 boinc boinc     20698 Jan  9 16:59 stderr.txt
[2026-01-09 16:59:48] HITS file was successfully produced:
[2026-01-09 16:59:48] -rw-------. 1 boinc boinc 223121785 Jan  9 16:58 shared/HITS.pool.root.1
[2026-01-09 16:59:48]  *** Contents of shared directory: ***
[2026-01-09 16:59:48] total 436512
[2026-01-09 16:59:48] -rw-r--r--. 2 boinc boinc 221578609 Jan  9 14:20 ATLAS.root_0
[2026-01-09 16:59:48] -rw-r--r--. 2 boinc boinc     15847 Jan  9 14:20 start_atlas.sh
[2026-01-09 16:59:48] -rw-r--r--. 2 boinc boinc    592389 Jan  9 14:20 input.tar.gz
[2026-01-09 16:59:48] -rw-------. 1 boinc boinc 223121785 Jan  9 16:58 HITS.pool.root.1
[2026-01-09 16:59:48] -rw-------. 1 boinc boinc   1669120 Jan  9 16:59 result.tar.gz
16:59:49 (16445): run_atlas exited; CPU time 71090.905054
16:59:49 (16445): called boinc_finish(0)

</stderr_txt>
]]>

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