Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:40:28 (2139522): wrapper (7.7.26015): starting
02:40:28 (2139522): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 02:40:28] Arguments: --nthreads 3
[2026-01-10 02:40:28] Threads: 3
[2026-01-10 02:40:28] Checking for CVMFS
[2026-01-10 02:40:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 02:40:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 02:40:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 02:40:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 02:40:29] 2.13.3.0 1865303 1433 92964 154951 3 57 14344758 15728641 0 130560 0 847202 99.987 53386 15 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
[2026-01-10 02:40:29] CVMFS is ok
[2026-01-10 02:40:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 02:40:29] Checking for apptainer binary...
[2026-01-10 02:40:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 02:40:29] Running /usr/bin/apptainer --version
[2026-01-10 02:40:29] apptainer version 1.4.4-1.el9
[2026-01-10 02:40:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 02:40:29] testio003
[2026-01-10 02:40:29] apptainer works
[2026-01-10 02:40:29] Set ATHENA_PROC_NUMBER=3
[2026-01-10 02:40:29] Set ATHENA_CORE_NUMBER=3
[2026-01-10 02:40:29] Starting ATLAS job with PandaID=6963156321
[2026-01-10 02:40:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 05:19:02]  *** The last 200 lines of the pilot log: ***
[2026-01-10 05:19:02] 2026-01-09 20:18:19,416 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 05:19:02] 2026-01-09 20:18:19,419 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3624.848
[2026-01-10 05:19:02] 2026-01-09 20:18:19,420 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6963156321/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 05:19:02] 2026-01-09 20:18:19,421 | INFO     | extracted standard info from prmon json
[2026-01-10 05:19:02] 2026-01-09 20:18:19,421 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 05:19:02] 2026-01-09 20:18:19,421 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 05:19:02] 2026-01-09 20:18:19,421 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 05:19:02] 2026-01-09 20:18:19,422 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 05:19:02] 2026-01-09 20:18:19,423 | INFO     | fitting pss+swap vs Time
[2026-01-10 05:19:02] 2026-01-09 20:18:19,423 | INFO     | sum of square deviations: 1154652747.9096742
[2026-01-10 05:19:02] 2026-01-09 20:18:19,423 | INFO     | sum of deviations: -19894068294.47742
[2026-01-10 05:19:02] 2026-01-09 20:18:19,424 | INFO     | mean x: 1767985176.083871
[2026-01-10 05:19:02] 2026-01-09 20:18:19,424 | INFO     | mean y: 2368319.729032258
[2026-01-10 05:19:02] 2026-01-09 20:18:19,424 | INFO     | sufficient remaining disk space (48946479104 B)
[2026-01-10 05:19:02] 2026-01-09 20:18:19,424 | INFO     | intersect: 30463836410.729214
[2026-01-10 05:19:02] 2026-01-09 20:18:19,424 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-10 05:19:02] 2026-01-09 20:18:19,424 | INFO     | chi2: 2.8069415532188406
[2026-01-10 05:19:02] 2026-01-09 20:18:19,424 | INFO     | sum of square deviations: 1046477940.3733342
[2026-01-10 05:19:02] 2026-01-09 20:18:19,425 | INFO     | sum of deviations: -10113468481.666668
[2026-01-10 05:19:02] 2026-01-09 20:18:19,425 | INFO     | mean x: 1767985023.5866666
[2026-01-10 05:19:02] 2026-01-09 20:18:19,425 | INFO     | mean y: 2381782.6666666665
[2026-01-10 05:19:02] 2026-01-09 20:18:19,425 | INFO     | intersect: 17088705461.61927
[2026-01-10 05:19:02] 2026-01-09 20:18:19,425 | INFO     | chi2: 2.173060007303235
[2026-01-10 05:19:02] 2026-01-09 20:18:19,425 | INFO     | current chi2=2.173060007303235 (change=22.58264142296467 %)
[2026-01-10 05:19:02] 2026-01-09 20:18:19,425 | INFO     | right removable region: 149
[2026-01-10 05:19:02] 2026-01-09 20:18:19,425 | INFO     | sum of square deviations: 1046470010.3733342
[2026-01-10 05:19:02] 2026-01-09 20:18:19,426 | INFO     | sum of deviations: -47396301558.57332
[2026-01-10 05:19:02] 2026-01-09 20:18:19,426 | INFO     | mean x: 1767985328.5866666
[2026-01-10 05:19:02] 2026-01-09 20:18:19,426 | INFO     | mean y: 2406719.3133333335
[2026-01-10 05:19:02] 2026-01-09 20:18:19,426 | INFO     | intersect: 80077291765.4049
[2026-01-10 05:19:02] 2026-01-09 20:18:19,426 | INFO     | chi2: 0.9903150974038317
[2026-01-10 05:19:02] 2026-01-09 20:18:19,426 | INFO     | current chi2=0.9903150974038317 (change=64.71906954143043 %)
[2026-01-10 05:19:02] 2026-01-09 20:18:19,426 | INFO     | sum of square deviations: 945264147.8344823
[2026-01-10 05:19:02] 2026-01-09 20:18:19,427 | INFO     | sum of deviations: -41380624621.55172
[2026-01-10 05:19:02] 2026-01-09 20:18:19,427 | INFO     | mean x: 1767985481.0896552
[2026-01-10 05:19:02] 2026-01-09 20:18:19,427 | INFO     | mean y: 2397619.9655172415
[2026-01-10 05:19:02] 2026-01-09 20:18:19,427 | INFO     | intersect: 77399116512.69884
[2026-01-10 05:19:02] 2026-01-09 20:18:19,427 | INFO     | chi2: 0.982311176607229
[2026-01-10 05:19:02] 2026-01-09 20:18:19,427 | INFO     | current chi2=0.982311176607229 (change=0.8082196078385019 %)
[2026-01-10 05:19:02] 2026-01-09 20:18:19,427 | INFO     | left removable region: 20
[2026-01-10 05:19:02] 2026-01-09 20:18:19,427 | INFO     | sum of square deviations: 665590615.6899253
[2026-01-10 05:19:02] 2026-01-09 20:18:19,428 | INFO     | sum of deviations: -17103794232.449608
[2026-01-10 05:19:02] 2026-01-09 20:18:19,428 | INFO     | mean x: 1767985603.1007752
[2026-01-10 05:19:02] 2026-01-09 20:18:19,428 | INFO     | mean y: 2387512.496124031
[2026-01-10 05:19:02] 2026-01-09 20:18:19,428 | INFO     | intersect: 45434611538.107025
[2026-01-10 05:19:02] 2026-01-09 20:18:19,428 | INFO     | chi2: 0.23914259892251297
[2026-01-10 05:19:02] 2026-01-09 20:18:19,428 | INFO     | current memory leak: -25.70 B/s (using 129 data points, chi2=0.24)
[2026-01-10 05:19:02] 2026-01-09 20:18:19,428 | INFO     | could have reported an average CPU frequency of 3647 MHz (9 samples)
[2026-01-10 05:19:02] 2026-01-09 20:18:19,428 | INFO     | ..............................
[2026-01-10 05:19:02] 2026-01-09 20:18:19,428 | INFO     | . Timing measurements:
[2026-01-10 05:19:02] 2026-01-09 20:18:19,428 | INFO     | . get job = 0 s
[2026-01-10 05:19:02] 2026-01-09 20:18:19,429 | INFO     | . initial setup = 5 s
[2026-01-10 05:19:02] 2026-01-09 20:18:19,429 | INFO     | . payload setup = 21 s
[2026-01-10 05:19:02] 2026-01-09 20:18:19,429 | INFO     | . stage-in = 0 s
[2026-01-10 05:19:02] 2026-01-09 20:18:19,429 | INFO     | . payload execution = 9415 s
[2026-01-10 05:19:02] 2026-01-09 20:18:19,429 | INFO     | size of work directory /var/lib/boinc/slots/2/PanDA_Pilot-6963156321: 2973994 B (within 4404019200 B limit)
[2026-01-10 05:19:02] 2026-01-09 20:18:19,429 | INFO     | . stage-out = 0 s
[2026-01-10 05:19:02] 2026-01-09 20:18:19,429 | INFO     | . log creation = 0 s
[2026-01-10 05:19:02] 2026-01-09 20:18:19,429 | INFO     | pfn file=/var/lib/boinc/slots/2/PanDA_Pilot-6963156321/HITS.47898826._031498.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-10 05:19:02] 2026-01-09 20:18:19,429 | INFO     | ..............................
[2026-01-10 05:19:02] 2026-01-09 20:18:19,429 | INFO     | total size of present files: 0 B (workdir size: 2973994 B)
[2026-01-10 05:19:02] 2026-01-09 20:18:19,429 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/2/PanDA_Pilot-6963156321/HITS.47898826._031498.pool.root.1 since it does not exist
[2026-01-10 05:19:02] 2026-01-09 20:18:19,466 | INFO     | 
[2026-01-10 05:19:02] 2026-01-09 20:18:19,466 | INFO     | job summary report
[2026-01-10 05:19:02] 2026-01-09 20:18:19,466 | INFO     | --------------------------------------------------
[2026-01-10 05:19:02] 2026-01-09 20:18:19,466 | INFO     | PanDA job id: 6963156321
[2026-01-10 05:19:02] 2026-01-09 20:18:19,466 | INFO     | task id: 47898826
[2026-01-10 05:19:02] 2026-01-09 20:18:19,466 | INFO     | errors: (none)
[2026-01-10 05:19:02] 2026-01-09 20:18:19,466 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 05:19:02] 2026-01-09 20:18:19,466 | INFO     | pilot state: finished 
[2026-01-10 05:19:02] 2026-01-09 20:18:19,466 | INFO     | transexitcode: 0
[2026-01-10 05:19:02] 2026-01-09 20:18:19,466 | INFO     | exeerrorcode: 0
[2026-01-10 05:19:02] 2026-01-09 20:18:19,467 | INFO     | exeerrordiag: 
[2026-01-10 05:19:02] 2026-01-09 20:18:19,467 | INFO     | exitcode: 0
[2026-01-10 05:19:02] 2026-01-09 20:18:19,467 | INFO     | exitmsg: OK
[2026-01-10 05:19:02] 2026-01-09 20:18:19,467 | INFO     | cpuconsumptiontime: 26760 s
[2026-01-10 05:19:02] 2026-01-09 20:18:19,467 | INFO     | nevents: 400
[2026-01-10 05:19:02] 2026-01-09 20:18:19,467 | INFO     | neventsw: 0
[2026-01-10 05:19:02] 2026-01-09 20:18:19,467 | INFO     | pid: 2149736
[2026-01-10 05:19:02] 2026-01-09 20:18:19,468 | INFO     | pgrp: 2149736
[2026-01-10 05:19:02] 2026-01-09 20:18:19,468 | INFO     | corecount: 3
[2026-01-10 05:19:02] 2026-01-09 20:18:19,468 | INFO     | event service: False
[2026-01-10 05:19:02] 2026-01-09 20:18:19,468 | INFO     | sizes: {0: 2283969, 2: 2284231, 10: 2284259, 9439: 2312684, 9440: 2321682, 9441: 2321738, 9445: 2322152}
[2026-01-10 05:19:02] 2026-01-09 20:18:19,468 | INFO     | --------------------------------------------------
[2026-01-10 05:19:02] 2026-01-09 20:18:19,468 | INFO     | 
[2026-01-10 05:19:02] 2026-01-09 20:18:19,468 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-01-10 05:19:02] 2026-01-09 20:18:19,478 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 05:19:02] 2026-01-09 20:18:19,479 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 05:19:02] 2026-01-09 20:18:19,479 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 05:19:02] 2026-01-09 20:18:19,479 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 05:19:02] 2026-01-09 20:18:19,479 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 05:19:02] 2026-01-09 20:18:19,479 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 05:19:02] 2026-01-09 20:18:19,479 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 05:19:02] 2026-01-09 20:18:19,479 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 05:19:02] 2026-01-09 20:18:19,479 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 05:19:02] 2026-01-09 20:18:19,479 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 05:19:02] 2026-01-09 20:18:19,479 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 05:19:02] 2026-01-09 20:18:19,479 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 05:19:02] 2026-01-09 20:18:19,479 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 05:19:02] 2026-01-09 20:18:19,479 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 05:19:02] 2026-01-09 20:18:19,479 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 05:19:02] 2026-01-09 20:18:19,480 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 05:19:02] 2026-01-09 20:18:19,480 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 05:19:02] 2026-01-09 20:18:19,480 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 05:19:02] 2026-01-09 20:18:19,480 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 05:19:02] 2026-01-09 20:18:19,480 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 05:19:02] 2026-01-09 20:18:19,480 | INFO     | job 6963156321 has completed (purged errors)
[2026-01-10 05:19:02] 2026-01-09 20:18:19,480 | INFO     | overall cleanup function is called
[2026-01-10 05:19:02] 2026-01-09 20:18:19,505 | INFO     | number of running child processes to parent process 2149736: 1
[2026-01-10 05:19:02] 2026-01-09 20:18:19,505 | INFO     | maximum number of monitored processes: 6
[2026-01-10 05:19:02] 2026-01-09 20:18:19,505 | INFO     | aborting job monitoring since job object (job id=6963156321) has expired
[2026-01-10 05:19:02] 2026-01-09 20:18:20,487 | INFO     | --- collectZombieJob: --- 10, [2149736]
[2026-01-10 05:19:02] 2026-01-09 20:18:20,487 | INFO     | zombie collector waiting for pid 2149736
[2026-01-10 05:19:02] 2026-01-09 20:18:20,487 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 05:19:02] 2026-01-09 20:18:20,487 | INFO     | collected zombie processes
[2026-01-10 05:19:02] 2026-01-09 20:18:20,488 | INFO     | will attempt to kill all subprocesses of pid=2149736
[2026-01-10 05:19:02] 2026-01-09 20:18:20,522 | INFO     | process IDs to be killed: [2149736] (in reverse order)
[2026-01-10 05:19:02] 2026-01-09 20:18:20,540 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 05:19:02] 2026-01-09 20:18:20,540 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 05:19:02] 2026-01-09 20:18:20,541 | INFO     | did not find any defunct processes belonging to 2149736
[2026-01-10 05:19:02] 2026-01-09 20:18:20,542 | INFO     | did not find any defunct processes belonging to 2149736
[2026-01-10 05:19:02] 2026-01-09 20:18:20,542 | INFO     | ready for new job
[2026-01-10 05:19:02] 2026-01-09 20:18:20,542 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 05:19:02] 2026-01-09 20:18:20,543 | INFO     | ***************************************
[2026-01-10 05:19:02] 2026-01-09 20:18:20,543 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 05:19:02] 2026-01-09 20:18:20,543 | INFO     | ***************************************
[2026-01-10 05:19:02] 2026-01-09 20:18:20,543 | INFO     | 
[2026-01-10 05:19:02] 2026-01-09 20:18:20,543 | INFO     | architecture information:
[2026-01-10 05:19:02] 2026-01-09 20:18:20,544 | INFO     | executing command: cat /etc/os-release
[2026-01-10 05:19:02] 2026-01-09 20:18:20,551 | INFO     | cat /etc/os-release:
[2026-01-10 05:19:02] NAME="CentOS Linux"
[2026-01-10 05:19:02] VERSION="7 (Core)"
[2026-01-10 05:19:02] ID="centos"
[2026-01-10 05:19:02] ID_LIKE="rhel fedora"
[2026-01-10 05:19:02] VERSION_ID="7"
[2026-01-10 05:19:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 05:19:02] ANSI_COLOR="0;31"
[2026-01-10 05:19:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 05:19:02] HOME_URL="https://www.centos.org/"
[2026-01-10 05:19:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 05:19:02] 
[2026-01-10 05:19:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 05:19:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 05:19:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 05:19:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 05:19:02] 
[2026-01-10 05:19:02] 2026-01-09 20:18:20,551 | INFO     | ***************************************
[2026-01-10 05:19:02] 2026-01-09 20:18:21,054 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-01-10 05:19:02] 2026-01-09 20:18:21,065 | INFO     | sufficient remaining disk space (48950673408 B)
[2026-01-10 05:19:02] 2026-01-09 20:18:21,065 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 05:19:02] 2026-01-09 20:18:21,065 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 05:19:02] 2026-01-09 20:18:21,065 | INFO     | update_server=False
[2026-01-10 05:19:02] 2026-01-09 20:18:21,065 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 05:19:02] 2026-01-09 20:18:21,065 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 05:19:02] 2026-01-09 20:18:21,065 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 05:19:02] 2026-01-09 20:18:21,065 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 05:19:02] 2026-01-09 20:18:21,066 | INFO     | aborting loop
[2026-01-10 05:19:02] 2026-01-09 20:18:21,427 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 05:19:02] 2026-01-09 20:18:22,070 | INFO     | [job] queue monitor thread has finished
[2026-01-10 05:19:02] 2026-01-09 20:18:22,070 | INFO     | [job] retrieve thread has finished
[2026-01-10 05:19:02] 2026-01-09 20:18:22,071 | INFO     | [job] job monitor thread has finished
[2026-01-10 05:19:02] 2026-01-09 20:18:22,089 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 05:19:02] 2026-01-09 20:18:22,123 | INFO     | all data control threads have been joined
[2026-01-10 05:19:02] 2026-01-09 20:18:22,124 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 05:19:02] 2026-01-09 20:18:22,173 | INFO     | all job control threads have been joined
[2026-01-10 05:19:02] 2026-01-09 20:18:22,210 | INFO     | [job] validate thread has finished
[2026-01-10 05:19:02] 2026-01-09 20:18:22,468 | INFO     | all payload control threads have been joined
[2026-01-10 05:19:02] 2026-01-09 20:18:22,599 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 05:19:02] 2026-01-09 20:18:22,605 | INFO     | [data] copytool_in thread has finished
[2026-01-10 05:19:02] 2026-01-09 20:18:23,071 | INFO     | [data] copytool_out thread has finished
[2026-01-10 05:19:02] 2026-01-09 20:18:23,128 | INFO     | [data] control thread has finished
[2026-01-10 05:19:02] 2026-01-09 20:18:23,133 | INFO     | [payload] validate_post thread has finished
[2026-01-10 05:19:02] 2026-01-09 20:18:23,179 | INFO     | [job] control thread has finished
[2026-01-10 05:19:02] 2026-01-09 20:18:23,246 | INFO     | [payload] failed_post thread has finished
[2026-01-10 05:19:02] 2026-01-09 20:18:23,474 | INFO     | [payload] control thread has finished
[2026-01-10 05:19:02] 2026-01-09 20:18:25,429 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 05:19:02] 2026-01-09 20:18:31,938 | INFO     | job.realtimelogging is not enabled
[2026-01-10 05:19:02] 2026-01-09 20:18:32,943 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 05:19:02] 2026-01-09 20:18:50,710 | INFO     | PID=2143202 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 05:19:02] 2026-01-09 20:18:50,710 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 05:19:02] 2026-01-09 20:18:50,710 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 05:19:02] 2026-01-09 20:18:50,710 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 05:19:02] 2026-01-09 20:18:55,969 | INFO     | [monitor] cgroup control has ended
[2026-01-10 05:19:02] 2026-01-09 20:18:57,591 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140289221719872)>', '<ExcThread(monitor, started 140288857204480)>']
[2026-01-10 05:19:02] 2026-01-09 20:18:57,742 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 05:19:02] 2026-01-09 20:18:57,743 | INFO     | [monitor] control thread has ended
[2026-01-10 05:19:02] 2026-01-09 20:19:02,617 | INFO     | all workflow threads have been joined
[2026-01-10 05:19:02] 2026-01-09 20:19:02,617 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 05:19:02] 2026-01-09 20:19:02,618 | INFO     | traces error code: 0
[2026-01-10 05:19:02] 2026-01-09 20:19:02,618 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 05:19:02] 2026-01-09 20:19:02,678 [wrapper] ==== pilot stdout END ====
[2026-01-10 05:19:02] 2026-01-09 20:19:02,680 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 05:19:02] 2026-01-09 20:19:02,681 [wrapper] pilotpid: 2143202
[2026-01-10 05:19:02] 2026-01-09 20:19:02,683 [wrapper] Pilot exit status: 0
[2026-01-10 05:19:02] 2026-01-09 20:19:02,688 [wrapper] pandaids: 6963156321
[2026-01-10 05:19:02] 2026-01-09 20:19:02,700 [wrapper] cleanup supervisor_pilot 2166454 2143203
[2026-01-10 05:19:02] 2026-01-09 20:19:02,702 [wrapper] Test setup, not cleaning
[2026-01-10 05:19:02] 2026-01-09 20:19:02,703 [wrapper] apfmon messages muted
[2026-01-10 05:19:02] 2026-01-09 20:19:02,705 [wrapper] ==== wrapper stdout END ====
[2026-01-10 05:19:02] 2026-01-09 20:19:02,706 [wrapper] ==== wrapper stderr END ====
[2026-01-10 05:19:02]  *** Error codes and diagnostics ***
[2026-01-10 05:19:02]     "exeErrorCode": 0,
[2026-01-10 05:19:02]     "exeErrorDiag": "",
[2026-01-10 05:19:02]     "pilotErrorCode": 0,
[2026-01-10 05:19:02]     "pilotErrorDiag": "",
[2026-01-10 05:19:02]  *** Listing of results directory ***
[2026-01-10 05:19:02] total 440308
[2026-01-10 05:19:02] -rw-r--r--. 1 boinc boinc    579449 Jan  9 04:06 pilot3.tar.gz
[2026-01-10 05:19:02] -rwx------. 1 boinc boinc     36322 Jan  9 04:10 runpilot2-wrapper.sh
[2026-01-10 05:19:02] -rw-r--r--. 1 boinc boinc      5112 Jan  9 04:11 queuedata.json
[2026-01-10 05:19:02] -rw-r--r--. 1 boinc boinc       100 Jan 10 02:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 05:19:02] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 02:40 run_atlas
[2026-01-10 05:19:02] -rw-r--r--. 1 boinc boinc       105 Jan 10 02:40 job.xml
[2026-01-10 05:19:02] -rw-r--r--. 1 boinc boinc      9406 Jan 10 02:40 init_data.xml
[2026-01-10 05:19:02] -rw-r--r--. 2 boinc boinc 223501516 Jan 10 02:40 EVNT.47898824._000899.pool.root.1
[2026-01-10 05:19:02] -rw-r--r--. 2 boinc boinc     15847 Jan 10 02:40 start_atlas.sh
[2026-01-10 05:19:02] drwxrwx--x. 2 boinc boinc        68 Jan 10 02:40 shared
[2026-01-10 05:19:02] -rw-r--r--. 2 boinc boinc    592401 Jan 10 02:40 input.tar.gz
[2026-01-10 05:19:02] -rw-r--r--. 1 boinc boinc         0 Jan 10 02:40 boinc_lockfile
[2026-01-10 05:19:02] -rw-r--r--. 1 boinc boinc      2519 Jan 10 02:40 pandaJob.out
[2026-01-10 05:19:02] -rw-------. 1 boinc boinc    989356 Jan 10 02:40 agis_schedconf.cvmfs.json
[2026-01-10 05:19:02] -rw-------. 1 boinc boinc   1516240 Jan 10 02:40 agis_ddmendpoints.agis.ALL.json
[2026-01-10 05:19:02] drwx------. 5 boinc boinc      4096 Jan 10 02:40 pilot3
[2026-01-10 05:19:02] -rw-------. 1 boinc boinc 220190171 Jan 10 05:17 HITS.47898826._031498.pool.root.1
[2026-01-10 05:19:02] -rw-r--r--. 1 boinc boinc       529 Jan 10 05:18 boinc_task_state.xml
[2026-01-10 05:19:02] -rw-------. 1 boinc boinc      1012 Jan 10 05:18 memory_monitor_summary.json
[2026-01-10 05:19:02] -rw-------. 1 boinc boinc    325486 Jan 10 05:18 log.47898826._031498.job.log.tgz.1
[2026-01-10 05:19:02] -rw-------. 1 boinc boinc        95 Jan 10 05:18 pilot_heartbeat.json
[2026-01-10 05:19:02] -rw-------. 1 boinc boinc      7762 Jan 10 05:18 heartbeat.json
[2026-01-10 05:19:02] -rw-r--r--. 1 boinc boinc      8192 Jan 10 05:18 boinc_mmap_file
[2026-01-10 05:19:02] -rw-r--r--. 1 boinc boinc        27 Jan 10 05:18 wrapper_checkpoint.txt
[2026-01-10 05:19:02] -rw-------. 1 boinc boinc      4820 Jan 10 05:19 pilotlog.txt
[2026-01-10 05:19:02] -rw-------. 1 boinc boinc   1316173 Jan 10 05:19 log.47898826._031498.job.log.1
[2026-01-10 05:19:02] -rw-------. 1 boinc boinc       357 Jan 10 05:19 output.list
[2026-01-10 05:19:02] -rw-r--r--. 1 boinc boinc       620 Jan 10 05:19 runtime_log
[2026-01-10 05:19:02] -rw-------. 1 boinc boinc   1658880 Jan 10 05:19 result.tar.gz
[2026-01-10 05:19:02] -rw-r--r--. 1 boinc boinc      8775 Jan 10 05:19 runtime_log.err
[2026-01-10 05:19:02] -rw-------. 1 boinc boinc       643 Jan 10 05:19 2dFMDmmZAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmN8fKDmJ9bo3n.diag
[2026-01-10 05:19:02] -rw-r--r--. 1 boinc boinc     21227 Jan 10 05:19 stderr.txt
[2026-01-10 05:19:02] HITS file was successfully produced:
[2026-01-10 05:19:02] -rw-------. 1 boinc boinc 220190171 Jan 10 05:17 shared/HITS.pool.root.1
[2026-01-10 05:19:02]  *** Contents of shared directory: ***
[2026-01-10 05:19:02] total 435512
[2026-01-10 05:19:02] -rw-r--r--. 2 boinc boinc 223501516 Jan 10 02:40 ATLAS.root_0
[2026-01-10 05:19:02] -rw-r--r--. 2 boinc boinc     15847 Jan 10 02:40 start_atlas.sh
[2026-01-10 05:19:02] -rw-r--r--. 2 boinc boinc    592401 Jan 10 02:40 input.tar.gz
[2026-01-10 05:19:02] -rw-------. 1 boinc boinc 220190171 Jan 10 05:17 HITS.pool.root.1
[2026-01-10 05:19:02] -rw-------. 1 boinc boinc   1658880 Jan 10 05:19 result.tar.gz
05:19:04 (2139522): run_atlas exited; CPU time 26789.957729
05:19:04 (2139522): called boinc_finish(0)

</stderr_txt>
]]>

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