Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:59:44 (3881986): wrapper (7.7.26015): starting
02:59:44 (3881986): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 02:59:44] Arguments: --nthreads 8
[2026-01-09 02:59:44] Threads: 8
[2026-01-09 02:59:44] Checking for CVMFS
[2026-01-09 02:59:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 02:59:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 02:59:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 02:59:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 02:59:45] 2.13.3.0 7219 22614 162832 154936 3 635 35528620 40960001 20866 16776704 0 33726395 99.714 23748622 37608 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 02:59:45] CVMFS is ok
[2026-01-09 02:59:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 02:59:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 02:59:45] Further information can be found at the LHC@home message board.
[2026-01-09 02:59:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 02:59:45] Checking for apptainer binary...
[2026-01-09 02:59:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 02:59:45] Running /usr/bin/apptainer --version
[2026-01-09 02:59:45] apptainer version 1.4.5-2.el9
[2026-01-09 02:59:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 02:59:45] c-212-13.aglt2.org
[2026-01-09 02:59:45] apptainer works
[2026-01-09 02:59:45] Set ATHENA_PROC_NUMBER=8
[2026-01-09 02:59:45] Set ATHENA_CORE_NUMBER=8
[2026-01-09 02:59:45] Starting ATLAS job with PandaID=6962931552
[2026-01-09 02:59:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 09:51:12]  *** The last 200 lines of the pilot log: ***
[2026-01-09 09:51:12] 2026-01-09 14:50:31,804 | INFO     | monitor loop #1648: job 0:6962931552 is in state 'finished'
[2026-01-09 09:51:12] 2026-01-09 14:50:31,804 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 09:51:12] 2026-01-09 14:50:33,576 | INFO     | time since job start (24619s) is within the limit (174528.0s)
[2026-01-09 09:51:12] 2026-01-09 14:50:34,310 | INFO     | monitor loop #1649: job 0:6962931552 is in state 'finished'
[2026-01-09 09:51:12] 2026-01-09 14:50:34,310 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 09:51:12] 2026-01-09 14:50:35,581 | INFO     | time since job start (24621s) is within the limit (174528.0s)
[2026-01-09 09:51:12] 2026-01-09 14:50:36,816 | INFO     | monitor loop #1650: job 0:6962931552 is in state 'finished'
[2026-01-09 09:51:12] 2026-01-09 14:50:36,816 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 09:51:12] 2026-01-09 14:50:37,135 | INFO     | PID=3887079 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-09 09:51:12] 2026-01-09 14:50:37,135 | INFO     | .. there are 18 such processes running
[2026-01-09 09:51:12] 2026-01-09 14:50:38,138 | INFO     | time since job start (24624s) is within the limit (174528.0s)
[2026-01-09 09:51:12] 2026-01-09 14:50:38,797 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 09:51:12] 2026-01-09 14:50:38,806 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3184.9593749999985
[2026-01-09 09:51:12] 2026-01-09 14:50:38,823 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962931552/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 09:51:12] 2026-01-09 14:50:38,824 | INFO     | extracted standard info from prmon json
[2026-01-09 09:51:12] 2026-01-09 14:50:38,824 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 09:51:12] 2026-01-09 14:50:38,824 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 09:51:12] 2026-01-09 14:50:38,852 | INFO     | fitting pss+swap vs Time
[2026-01-09 09:51:12] 2026-01-09 14:50:38,870 | INFO     | sum of square deviations: 20291176638.10416
[2026-01-09 09:51:12] 2026-01-09 14:50:38,894 | INFO     | sum of deviations: -225076453782.58783
[2026-01-09 09:51:12] 2026-01-09 14:50:38,894 | INFO     | mean x: 1767957932.9528537
[2026-01-09 09:51:12] 2026-01-09 14:50:38,894 | INFO     | mean y: 2629322.3374689827
[2026-01-09 09:51:12] 2026-01-09 14:50:38,894 | INFO     | intersect: 19613404443.114365
[2026-01-09 09:51:12] 2026-01-09 14:50:38,894 | INFO     | chi2: 12.230917401242303
[2026-01-09 09:51:12] 2026-01-09 14:50:38,895 | INFO     | sum of square deviations: 19545346851.29644
[2026-01-09 09:51:12] 2026-01-09 14:50:38,922 | INFO     | sum of deviations: -111368273639.42195
[2026-01-09 09:51:12] 2026-01-09 14:50:38,922 | INFO     | mean x: 1767957780.477387
[2026-01-09 09:51:12] 2026-01-09 14:50:38,922 | INFO     | mean y: 2652576.286432161
[2026-01-09 09:51:12] 2026-01-09 14:50:38,922 | INFO     | intersect: 10076375359.368725
[2026-01-09 09:51:12] 2026-01-09 14:50:38,945 | INFO     | chi2: 9.643177923546027
[2026-01-09 09:51:12] 2026-01-09 14:50:38,945 | INFO     | current chi2=9.643177923546027 (change=21.157362058821832 %)
[2026-01-09 09:51:12] 2026-01-09 14:50:38,946 | INFO     | right removable region: 397
[2026-01-09 09:51:12] 2026-01-09 14:50:38,946 | INFO     | sum of square deviations: 19544866781.296444
[2026-01-09 09:51:12] 2026-01-09 14:50:38,949 | INFO     | sum of deviations: -368889281147.63324
[2026-01-09 09:51:12] 2026-01-09 14:50:38,949 | INFO     | mean x: 1767958085.477387
[2026-01-09 09:51:12] 2026-01-09 14:50:38,955 | INFO     | mean y: 2658702.429648241
[2026-01-09 09:51:12] 2026-01-09 14:50:38,955 | INFO     | intersect: 33371051260.36751
[2026-01-09 09:51:12] 2026-01-09 14:50:38,956 | INFO     | chi2: 8.088027707855867
[2026-01-09 09:51:12] 2026-01-09 14:50:38,956 | INFO     | current chi2=8.088027707855867 (change=33.872272679771676 %)
[2026-01-09 09:51:12] 2026-01-09 14:50:38,956 | INFO     | sum of square deviations: 18817141375.98985
[2026-01-09 09:51:12] 2026-01-09 14:50:38,979 | INFO     | sum of deviations: -409714705040.6133
[2026-01-09 09:51:12] 2026-01-09 14:50:38,979 | INFO     | mean x: 1767958237.994911
[2026-01-09 09:51:12] 2026-01-09 14:50:38,979 | INFO     | mean y: 2667212.193384224
[2026-01-09 09:51:12] 2026-01-09 14:50:38,980 | INFO     | intersect: 38497275587.112045
[2026-01-09 09:51:12] 2026-01-09 14:50:38,980 | INFO     | chi2: 7.427788105099888
[2026-01-09 09:51:12] 2026-01-09 14:50:38,980 | INFO     | current chi2=7.427788105099888 (change=8.163171870871441 %)
[2026-01-09 09:51:12] 2026-01-09 14:50:38,980 | INFO     | left removable region: 20
[2026-01-09 09:51:12] 2026-01-09 14:50:38,980 | INFO     | sum of square deviations: 16610598942.47221
[2026-01-09 09:51:12] 2026-01-09 14:50:39,001 | INFO     | sum of deviations: -284778836615.801
[2026-01-09 09:51:12] 2026-01-09 14:50:39,002 | INFO     | mean x: 1767958360.0636604
[2026-01-09 09:51:12] 2026-01-09 14:50:39,002 | INFO     | mean y: 2701560.116710875
[2026-01-09 09:51:12] 2026-01-09 14:50:39,002 | INFO     | intersect: 30313295820.312275
[2026-01-09 09:51:12] 2026-01-09 14:50:39,002 | INFO     | chi2: 3.8597646160218755
[2026-01-09 09:51:12] 2026-01-09 14:50:39,002 | INFO     | current memory leak: -17.14 B/s (using 377 data points, chi2=3.86)
[2026-01-09 09:51:12] 2026-01-09 14:50:39,003 | INFO     | could have reported an average CPU frequency of 3151 MHz (17 samples)
[2026-01-09 09:51:12] 2026-01-09 14:50:39,003 | INFO     | ..............................
[2026-01-09 09:51:12] 2026-01-09 14:50:39,003 | INFO     | . Timing measurements:
[2026-01-09 09:51:12] 2026-01-09 14:50:39,003 | INFO     | . get job = 0 s
[2026-01-09 09:51:12] 2026-01-09 14:50:39,003 | INFO     | . initial setup = 3 s
[2026-01-09 09:51:12] 2026-01-09 14:50:39,003 | INFO     | . payload setup = 14 s
[2026-01-09 09:51:12] 2026-01-09 14:50:39,003 | INFO     | . stage-in = 0 s
[2026-01-09 09:51:12] 2026-01-09 14:50:39,003 | INFO     | . payload execution = 24555 s
[2026-01-09 09:51:12] 2026-01-09 14:50:39,003 | INFO     | . stage-out = 5 s
[2026-01-09 09:51:12] 2026-01-09 14:50:39,003 | INFO     | . log creation = 1 s
[2026-01-09 09:51:12] 2026-01-09 14:50:39,004 | INFO     | ..............................
[2026-01-09 09:51:12] 2026-01-09 14:50:39,194 | INFO     | 
[2026-01-09 09:51:12] 2026-01-09 14:50:39,194 | INFO     | job summary report
[2026-01-09 09:51:12] 2026-01-09 14:50:39,195 | INFO     | --------------------------------------------------
[2026-01-09 09:51:12] 2026-01-09 14:50:39,195 | INFO     | PanDA job id: 6962931552
[2026-01-09 09:51:12] 2026-01-09 14:50:39,195 | INFO     | task id: 47961985
[2026-01-09 09:51:12] 2026-01-09 14:50:39,195 | INFO     | errors: (none)
[2026-01-09 09:51:12] 2026-01-09 14:50:39,195 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 09:51:12] 2026-01-09 14:50:39,195 | INFO     | pilot state: finished 
[2026-01-09 09:51:12] 2026-01-09 14:50:39,195 | INFO     | transexitcode: 0
[2026-01-09 09:51:12] 2026-01-09 14:50:39,195 | INFO     | exeerrorcode: 0
[2026-01-09 09:51:12] 2026-01-09 14:50:39,195 | INFO     | exeerrordiag: 
[2026-01-09 09:51:12] 2026-01-09 14:50:39,195 | INFO     | exitcode: 0
[2026-01-09 09:51:12] 2026-01-09 14:50:39,195 | INFO     | exitmsg: OK
[2026-01-09 09:51:12] 2026-01-09 14:50:39,195 | INFO     | cpuconsumptiontime: 37837 s
[2026-01-09 09:51:12] 2026-01-09 14:50:39,195 | INFO     | nevents: 150
[2026-01-09 09:51:12] 2026-01-09 14:50:39,195 | INFO     | neventsw: 0
[2026-01-09 09:51:12] 2026-01-09 14:50:39,195 | INFO     | pid: 3894011
[2026-01-09 09:51:12] 2026-01-09 14:50:39,195 | INFO     | pgrp: 3894011
[2026-01-09 09:51:12] 2026-01-09 14:50:39,195 | INFO     | corecount: 8
[2026-01-09 09:51:12] 2026-01-09 14:50:39,195 | INFO     | event service: False
[2026-01-09 09:51:12] 2026-01-09 14:50:39,196 | INFO     | sizes: {0: 2284377, 1: 2284576, 2: 2284576, 12: 2284866, 23: 2284894, 24575: 2321653, 24582: 2330703, 24592: 2330957}
[2026-01-09 09:51:12] 2026-01-09 14:50:39,196 | INFO     | --------------------------------------------------
[2026-01-09 09:51:12] 2026-01-09 14:50:39,196 | INFO     | 
[2026-01-09 09:51:12] 2026-01-09 14:50:39,196 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 09:51:12] 2026-01-09 14:50:39,483 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 09:51:12] 2026-01-09 14:50:39,483 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 09:51:12] 2026-01-09 14:50:39,483 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 09:51:12] 2026-01-09 14:50:39,483 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 09:51:12] 2026-01-09 14:50:39,483 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 09:51:12] 2026-01-09 14:50:39,483 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 09:51:12] 2026-01-09 14:50:39,483 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 09:51:12] 2026-01-09 14:50:39,483 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 09:51:12] 2026-01-09 14:50:39,483 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 09:51:12] 2026-01-09 14:50:39,484 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 09:51:12] 2026-01-09 14:50:39,484 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 09:51:12] 2026-01-09 14:50:39,484 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 09:51:12] 2026-01-09 14:50:39,484 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 09:51:12] 2026-01-09 14:50:39,484 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 09:51:12] 2026-01-09 14:50:39,484 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 09:51:12] 2026-01-09 14:50:39,484 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 09:51:12] 2026-01-09 14:50:39,484 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 09:51:12] 2026-01-09 14:50:39,484 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 09:51:12] 2026-01-09 14:50:39,484 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 09:51:12] 2026-01-09 14:50:39,484 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 09:51:12] 2026-01-09 14:50:39,484 | INFO     | job 6962931552 has completed (purged errors)
[2026-01-09 09:51:12] 2026-01-09 14:50:39,484 | INFO     | overall cleanup function is called
[2026-01-09 09:51:12] 2026-01-09 14:50:40,562 | INFO     | --- collectZombieJob: --- 10, [3894011]
[2026-01-09 09:51:12] 2026-01-09 14:50:40,562 | INFO     | zombie collector waiting for pid 3894011
[2026-01-09 09:51:12] 2026-01-09 14:50:40,563 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 09:51:12] 2026-01-09 14:50:40,563 | INFO     | collected zombie processes
[2026-01-09 09:51:12] 2026-01-09 14:50:40,563 | INFO     | will attempt to kill all subprocesses of pid=3894011
[2026-01-09 09:51:12] 2026-01-09 14:50:41,127 | INFO     | process IDs to be killed: [3894011] (in reverse order)
[2026-01-09 09:51:12] 2026-01-09 14:50:41,266 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 09:51:12] 2026-01-09 14:50:41,266 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 09:51:12] 2026-01-09 14:50:41,283 | INFO     | did not find any defunct processes belonging to 3894011
[2026-01-09 09:51:12] 2026-01-09 14:50:41,297 | INFO     | did not find any defunct processes belonging to 3894011
[2026-01-09 09:51:12] 2026-01-09 14:50:41,297 | INFO     | ready for new job
[2026-01-09 09:51:12] 2026-01-09 14:50:41,297 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 09:51:12] 2026-01-09 14:50:41,301 | INFO     | ***************************************
[2026-01-09 09:51:12] 2026-01-09 14:50:41,301 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 09:51:12] 2026-01-09 14:50:41,301 | INFO     | ***************************************
[2026-01-09 09:51:12] 2026-01-09 14:50:41,301 | INFO     | 
[2026-01-09 09:51:12] 2026-01-09 14:50:41,349 | INFO     | architecture information:
[2026-01-09 09:51:12] 2026-01-09 14:50:41,349 | INFO     | executing command: cat /etc/os-release
[2026-01-09 09:51:12] 2026-01-09 14:50:41,399 | INFO     | cat /etc/os-release:
[2026-01-09 09:51:12] NAME="CentOS Linux"
[2026-01-09 09:51:12] VERSION="7 (Core)"
[2026-01-09 09:51:12] ID="centos"
[2026-01-09 09:51:12] ID_LIKE="rhel fedora"
[2026-01-09 09:51:12] VERSION_ID="7"
[2026-01-09 09:51:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 09:51:12] ANSI_COLOR="0;31"
[2026-01-09 09:51:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 09:51:12] HOME_URL="https://www.centos.org/"
[2026-01-09 09:51:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 09:51:12] 
[2026-01-09 09:51:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 09:51:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 09:51:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 09:51:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 09:51:12] 
[2026-01-09 09:51:12] 2026-01-09 14:50:41,399 | INFO     | ***************************************
[2026-01-09 09:51:12] 2026-01-09 14:50:41,902 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 09:51:12] 2026-01-09 14:50:41,999 | INFO     | sufficient remaining disk space (126699438080 B)
[2026-01-09 09:51:12] 2026-01-09 14:50:42,000 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 09:51:12] 2026-01-09 14:50:42,000 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 09:51:12] 2026-01-09 14:50:42,000 | INFO     | update_server=False
[2026-01-09 09:51:12] 2026-01-09 14:50:42,000 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 09:51:12] 2026-01-09 14:50:42,000 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 09:51:12] 2026-01-09 14:50:42,079 | INFO     | all data control threads have been joined
[2026-01-09 09:51:12] 2026-01-09 14:50:42,288 | INFO     | all payload control threads have been joined
[2026-01-09 09:51:12] 2026-01-09 14:50:42,836 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:51:12] 2026-01-09 14:50:42,836 | INFO     | aborting loop
[2026-01-09 09:51:12] 2026-01-09 14:50:43,007 | INFO     | [job] retrieve thread has finished
[2026-01-09 09:51:12] 2026-01-09 14:50:43,086 | INFO     | [data] control thread has finished
[2026-01-09 09:51:12] 2026-01-09 14:50:43,115 | INFO     | all job control threads have been joined
[2026-01-09 09:51:12] 2026-01-09 14:50:43,130 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 09:51:12] 2026-01-09 14:50:43,140 | INFO     | [data] copytool_in thread has finished
[2026-01-09 09:51:12] 2026-01-09 14:50:43,299 | INFO     | [payload] control thread has finished
[2026-01-09 09:51:12] 2026-01-09 14:50:43,345 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 09:51:12] 2026-01-09 14:50:43,370 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 09:51:12] 2026-01-09 14:50:43,841 | INFO     | [job] job monitor thread has finished
[2026-01-09 09:51:12] 2026-01-09 14:50:44,007 | INFO     | [data] copytool_out thread has finished
[2026-01-09 09:51:12] 2026-01-09 14:50:44,088 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 09:51:12] 2026-01-09 14:50:44,121 | INFO     | [job] control thread has finished
[2026-01-09 09:51:12] 2026-01-09 14:50:44,135 | INFO     | [payload] validate_post thread has finished
[2026-01-09 09:51:12] 2026-01-09 14:50:44,148 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 09:51:12] 2026-01-09 14:50:44,149 | INFO     | [job] validate thread has finished
[2026-01-09 09:51:12] 2026-01-09 14:50:44,160 | INFO     | [payload] failed_post thread has finished
[2026-01-09 09:51:12] 2026-01-09 14:50:44,210 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 09:51:12] 2026-01-09 14:50:45,216 | INFO     | [job] queue monitor thread has finished
[2026-01-09 09:51:12] 2026-01-09 14:50:48,097 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 09:51:12] 2026-01-09 14:50:57,357 | INFO     | [monitor] cgroup control has ended
[2026-01-09 09:51:12] 2026-01-09 14:50:58,459 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140341824595776)>', '<ExcThread(monitor, started 140341445375744)>']
[2026-01-09 09:51:12] 2026-01-09 14:51:03,485 | INFO     | all workflow threads have been joined
[2026-01-09 09:51:12] 2026-01-09 14:51:03,485 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 09:51:12] 2026-01-09 14:51:03,486 | INFO     | traces error code: 0
[2026-01-09 09:51:12] 2026-01-09 14:51:03,487 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 09:51:12] 2026-01-09 14:51:11,750 | INFO     | PID=3887079 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 09:51:12] 2026-01-09 14:51:11,750 | INFO     | .. there are 18 such processes running
[2026-01-09 09:51:12] 2026-01-09 14:51:11,751 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 09:51:12] 2026-01-09 14:51:11,752 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 09:51:12] 2026-01-09 14:51:11,752 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 09:51:12] 2026-01-09 14:51:11,752 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 09:51:12] 2026-01-09 14:51:11,752 | INFO     | [monitor] control thread has ended
[2026-01-09 09:51:12] 2026-01-09 14:51:12,316 [wrapper] ==== pilot stdout END ====
[2026-01-09 09:51:12] 2026-01-09 14:51:12,377 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 09:51:12] 2026-01-09 14:51:12,388 [wrapper] pilotpid: 3887079
[2026-01-09 09:51:12] 2026-01-09 14:51:12,410 [wrapper] Pilot exit status: 0
[2026-01-09 09:51:12] 2026-01-09 14:51:12,464 [wrapper] pandaids: 6962931552
[2026-01-09 09:51:12] 2026-01-09 14:51:12,566 [wrapper] cleanup supervisor_pilot  643444 3887080
[2026-01-09 09:51:12] 2026-01-09 14:51:12,568 [wrapper] Test setup, not cleaning
[2026-01-09 09:51:12] 2026-01-09 14:51:12,570 [wrapper] apfmon messages muted
[2026-01-09 09:51:12] 2026-01-09 14:51:12,573 [wrapper] ==== wrapper stdout END ====
[2026-01-09 09:51:12] 2026-01-09 14:51:12,575 [wrapper] ==== wrapper stderr END ====
[2026-01-09 09:51:12]  *** Error codes and diagnostics ***
[2026-01-09 09:51:12]     "exeErrorCode": 0,
[2026-01-09 09:51:12]     "exeErrorDiag": "",
[2026-01-09 09:51:12]     "pilotErrorCode": 0,
[2026-01-09 09:51:12]     "pilotErrorDiag": "",
[2026-01-09 09:51:12]  *** Listing of results directory ***
[2026-01-09 09:51:12] total 559152
[2026-01-09 09:51:12] -rwx------. 1 boincer umatlas     36322 Jan  8 03:21 runpilot2-wrapper.sh
[2026-01-09 09:51:12] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 03:23 pilot3.tar.gz
[2026-01-09 09:51:12] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:27 queuedata.json
[2026-01-09 09:51:12] -rw-r--r--. 1 boincer umatlas       100 Jan  9 02:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 09:51:12] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 02:59 run_atlas
[2026-01-09 09:51:12] -rw-r--r--. 1 boincer umatlas       105 Jan  9 02:59 job.xml
[2026-01-09 09:51:12] -rw-r--r--. 2 boincer umatlas 416162314 Jan  9 02:59 EVNT.47961981._000025.pool.root.1
[2026-01-09 09:51:12] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 02:59 start_atlas.sh
[2026-01-09 09:51:12] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 02:59 shared
[2026-01-09 09:51:12] -rw-r--r--. 2 boincer umatlas    592607 Jan  9 02:59 input.tar.gz
[2026-01-09 09:51:12] -rw-r--r--. 1 boincer umatlas         0 Jan  9 02:59 boinc_lockfile
[2026-01-09 09:51:12] -rw-r--r--. 1 boincer umatlas      2875 Jan  9 02:59 pandaJob.out
[2026-01-09 09:51:12] -rw-------. 1 boincer umatlas        57 Jan  9 02:59 setup.sh.local
[2026-01-09 09:51:12] -rw-------. 1 boincer umatlas    989771 Jan  9 03:00 agis_schedconf.cvmfs.json
[2026-01-09 09:51:12] drwx------. 5 boincer umatlas      4096 Jan  9 03:00 pilot3
[2026-01-09 09:51:12] -rw-r--r--. 1 boincer umatlas       530 Jan  9 08:55 boinc_task_state.xml
[2026-01-09 09:51:12] -rw-r--r--. 1 boincer umatlas      6958 Jan  9 09:49 init_data.xml
[2026-01-09 09:51:12] -rw-------. 1 boincer umatlas 142856366 Jan  9 09:49 HITS.47961985._000684.pool.root.1
[2026-01-09 09:51:12] -rw-------. 1 boincer umatlas      1042 Jan  9 09:50 memory_monitor_summary.json
[2026-01-09 09:51:12] -rw-------. 1 boincer umatlas   1516240 Jan  9 09:50 agis_ddmendpoints.agis.ALL.json
[2026-01-09 09:51:12] -rw-------. 1 boincer umatlas   1492618 Jan  9 09:50 log.47961985._000684.job.log.tgz.1
[2026-01-09 09:51:12] -rw-------. 1 boincer umatlas      8569 Jan  9 09:50 heartbeat.json
[2026-01-09 09:51:12] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 09:51 boinc_mmap_file
[2026-01-09 09:51:12] -rw-r--r--. 1 boincer umatlas        28 Jan  9 09:51 wrapper_checkpoint.txt
[2026-01-09 09:51:12] -rw-------. 1 boincer umatlas       823 Jan  9 09:51 pilotlog.txt
[2026-01-09 09:51:12] -rw-------. 1 boincer umatlas        95 Jan  9 09:51 pilot_heartbeat.json
[2026-01-09 09:51:12] -rw-------. 1 boincer umatlas   3325159 Jan  9 09:51 log.47961985._000684.job.log.1
[2026-01-09 09:51:12] -rw-------. 1 boincer umatlas       353 Jan  9 09:51 output.list
[2026-01-09 09:51:12] -rw-r--r--. 1 boincer umatlas       620 Jan  9 09:51 runtime_log
[2026-01-09 09:51:12] -rw-------. 1 boincer umatlas   4833280 Jan  9 09:51 result.tar.gz
[2026-01-09 09:51:12] -rw-r--r--. 1 boincer umatlas      9343 Jan  9 09:51 runtime_log.err
[2026-01-09 09:51:12] -rw-------. 1 boincer umatlas       657 Jan  9 09:51 kCBNDmuR0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm28jKDmawrsTm.diag
[2026-01-09 09:51:12] -rw-r--r--. 1 boincer umatlas     21527 Jan  9 09:51 stderr.txt
[2026-01-09 09:51:12] HITS file was successfully produced:
[2026-01-09 09:51:12] -rw-------. 1 boincer umatlas 142856366 Jan  9 09:49 shared/HITS.pool.root.1
[2026-01-09 09:51:12]  *** Contents of shared directory: ***
[2026-01-09 09:51:12] total 551248
[2026-01-09 09:51:12] -rw-r--r--. 2 boincer umatlas 416162314 Jan  9 02:59 ATLAS.root_0
[2026-01-09 09:51:12] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 02:59 start_atlas.sh
[2026-01-09 09:51:12] -rw-r--r--. 2 boincer umatlas    592607 Jan  9 02:59 input.tar.gz
[2026-01-09 09:51:12] -rw-------. 1 boincer umatlas 142856366 Jan  9 09:49 HITS.pool.root.1
[2026-01-09 09:51:12] -rw-------. 1 boincer umatlas   4833280 Jan  9 09:51 result.tar.gz
09:51:13 (3881986): run_atlas exited; CPU time 38216.455377
09:51:13 (3881986): called boinc_finish(0)

</stderr_txt>
]]>

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