Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:31:21 (27156): wrapper (7.7.26015): starting
11:31:21 (27156): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 11:31:22] Arguments: --nthreads 8
[2026-01-09 11:31:22] Threads: 8
[2026-01-09 11:31:22] Checking for CVMFS
[2026-01-09 11:31:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 11:31:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 11:31:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 11:31:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 11:31:22] 2.11.2.0 29161 35280 118212 154940 3 56 19840373 25165824 0 130560 0 18185277 99.834 10545354 4498 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 11:31:22] CVMFS is ok
[2026-01-09 11:31:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 11:31:22] Checking for apptainer binary...
[2026-01-09 11:31:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 11:31:22] Running /usr/bin/apptainer --version
[2026-01-09 11:31:22] apptainer version 1.3.2-1.el7
[2026-01-09 11:31:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 11:31:23] cg-vwn454.simple-grid.lan
[2026-01-09 11:31:23] apptainer works
[2026-01-09 11:31:23] Set ATHENA_PROC_NUMBER=8
[2026-01-09 11:31:23] Set ATHENA_CORE_NUMBER=8
[2026-01-09 11:31:23] Starting ATLAS job with PandaID=6963153202
[2026-01-09 11:31:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:06:58]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:06:58] 2026-01-09 13:05:57,221 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 14:06:58] 2026-01-09 13:05:57,222 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2026-01-09 14:06:58] 2026-01-09 13:05:57,224 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6963153202/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 14:06:58] 2026-01-09 13:05:57,225 | INFO     | extracted standard info from prmon json
[2026-01-09 14:06:58] 2026-01-09 13:05:57,225 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 14:06:58] 2026-01-09 13:05:57,225 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 14:06:58] 2026-01-09 13:05:57,225 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 14:06:58] 2026-01-09 13:05:57,226 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 14:06:58] 2026-01-09 13:05:57,229 | INFO     | fitting pss+swap vs Time
[2026-01-09 14:06:58] 2026-01-09 13:05:57,230 | INFO     | sum of square deviations: 1088905998.0
[2026-01-09 14:06:58] 2026-01-09 13:05:57,231 | INFO     | sum of deviations: -11968926022.0
[2026-01-09 14:06:58] 2026-01-09 13:05:57,231 | INFO     | mean x: 1767959334.5
[2026-01-09 14:06:58] 2026-01-09 13:05:57,231 | INFO     | mean y: 2518564.25
[2026-01-09 14:06:58] 2026-01-09 13:05:57,231 | INFO     | intersect: 19435393875.250767
[2026-01-09 14:06:58] 2026-01-09 13:05:57,232 | INFO     | chi2: 2.401795292020149
[2026-01-09 14:06:58] 2026-01-09 13:05:57,232 | INFO     | sum of square deviations: 984941258.0
[2026-01-09 14:06:58] 2026-01-09 13:05:57,233 | INFO     | sum of deviations: -1441774833.0000036
[2026-01-09 14:06:58] 2026-01-09 13:05:57,233 | INFO     | mean x: 1767959182.0
[2026-01-09 14:06:58] 2026-01-09 13:05:57,233 | INFO     | mean y: 2533612.3605442178
[2026-01-09 14:06:58] 2026-01-09 13:05:57,233 | INFO     | intersect: 2590504248.8580084
[2026-01-09 14:06:58] 2026-01-09 13:05:57,233 | INFO     | chi2: 1.6389382550140006
[2026-01-09 14:06:58] 2026-01-09 13:05:57,234 | INFO     | current chi2=1.6389382550140006 (change=31.761950718310782 %)
[2026-01-09 14:06:58] 2026-01-09 13:05:57,234 | INFO     | sum of square deviations: 887813855.5
[2026-01-09 14:06:58] 2026-01-09 13:05:57,235 | INFO     | sum of deviations: -1171375161.499999
[2026-01-09 14:06:58] 2026-01-09 13:05:57,235 | INFO     | mean x: 1767959029.5
[2026-01-09 14:06:58] 2026-01-09 13:05:57,235 | INFO     | mean y: 2534037.0352112674
[2026-01-09 14:06:58] 2026-01-09 13:05:57,235 | INFO     | intersect: 2335166357.2862034
[2026-01-09 14:06:58] 2026-01-09 13:05:57,235 | INFO     | chi2: 1.639406125778381
[2026-01-09 14:06:58] 2026-01-09 13:05:57,235 | INFO     | current chi2=1.639406125778381 (change=-0.028547186750264544 %)
[2026-01-09 14:06:58] 2026-01-09 13:05:57,235 | INFO     | right removable region: 141
[2026-01-09 14:06:58] 2026-01-09 13:05:57,236 | INFO     | sum of square deviations: 984941258.0
[2026-01-09 14:06:58] 2026-01-09 13:05:57,236 | INFO     | sum of deviations: -34738975705.00001
[2026-01-09 14:06:58] 2026-01-09 13:05:57,237 | INFO     | mean x: 1767959487.0
[2026-01-09 14:06:58] 2026-01-09 13:05:57,237 | INFO     | mean y: 2551448.088435374
[2026-01-09 14:06:58] 2026-01-09 13:05:57,237 | INFO     | intersect: 62358657629.51644
[2026-01-09 14:06:58] 2026-01-09 13:05:57,237 | INFO     | chi2: 0.9433751089939497
[2026-01-09 14:06:58] 2026-01-09 13:05:57,237 | INFO     | current chi2=0.9433751089939497 (change=60.722085178188635 %)
[2026-01-09 14:06:58] 2026-01-09 13:05:57,238 | INFO     | sum of square deviations: 887813855.5
[2026-01-09 14:06:58] 2026-01-09 13:05:57,239 | INFO     | sum of deviations: -32398802967.5
[2026-01-09 14:06:58] 2026-01-09 13:05:57,239 | INFO     | mean x: 1767959639.5
[2026-01-09 14:06:58] 2026-01-09 13:05:57,239 | INFO     | mean y: 2547706.908450704
[2026-01-09 14:06:58] 2026-01-09 13:05:57,239 | INFO     | intersect: 64520324332.94898
[2026-01-09 14:06:58] 2026-01-09 13:05:57,239 | INFO     | chi2: 0.9336787523548234
[2026-01-09 14:06:58] 2026-01-09 13:05:57,239 | INFO     | current chi2=0.9336787523548234 (change=1.027836811325966 %)
[2026-01-09 14:06:58] 2026-01-09 13:05:57,239 | INFO     | left removable region: 20
[2026-01-09 14:06:58] 2026-01-09 13:05:57,240 | INFO     | sum of square deviations: 549294020.0
[2026-01-09 14:06:58] 2026-01-09 13:05:57,240 | INFO     | sum of deviations: -12871787997.999996
[2026-01-09 14:06:58] 2026-01-09 13:05:57,241 | INFO     | mean x: 1767959609.0
[2026-01-09 14:06:58] 2026-01-09 13:05:57,241 | INFO     | mean y: 2550410.776859504
[2026-01-09 14:06:58] 2026-01-09 13:05:57,241 | INFO     | intersect: 41431731227.40939
[2026-01-09 14:06:58] 2026-01-09 13:05:57,241 | INFO     | chi2: 0.11603912084736118
[2026-01-09 14:06:58] 2026-01-09 13:05:57,241 | INFO     | current memory leak: -23.43 B/s (using 121 data points, chi2=0.12)
[2026-01-09 14:06:58] 2026-01-09 13:05:57,242 | INFO     | could have reported an average CPU frequency of 2250 MHz (8 samples)
[2026-01-09 14:06:58] 2026-01-09 13:05:57,242 | INFO     | ..............................
[2026-01-09 14:06:58] 2026-01-09 13:05:57,242 | INFO     | . Timing measurements:
[2026-01-09 14:06:58] 2026-01-09 13:05:57,242 | INFO     | . get job = 0 s
[2026-01-09 14:06:58] 2026-01-09 13:05:57,242 | INFO     | . initial setup = 1 s
[2026-01-09 14:06:58] 2026-01-09 13:05:57,242 | INFO     | . payload setup = 6 s
[2026-01-09 14:06:58] 2026-01-09 13:05:57,243 | INFO     | . stage-in = 0 s
[2026-01-09 14:06:58] 2026-01-09 13:05:57,243 | INFO     | . payload execution = 9222 s
[2026-01-09 14:06:58] 2026-01-09 13:05:57,243 | INFO     | . stage-out = 0 s
[2026-01-09 14:06:58] 2026-01-09 13:05:57,243 | INFO     | . log creation = 0 s
[2026-01-09 14:06:58] 2026-01-09 13:05:57,243 | INFO     | ..............................
[2026-01-09 14:06:58] 2026-01-09 13:05:57,560 | INFO     | 
[2026-01-09 14:06:58] 2026-01-09 13:05:57,560 | INFO     | job summary report
[2026-01-09 14:06:58] 2026-01-09 13:05:57,560 | INFO     | --------------------------------------------------
[2026-01-09 14:06:58] 2026-01-09 13:05:57,560 | INFO     | PanDA job id: 6963153202
[2026-01-09 14:06:58] 2026-01-09 13:05:57,560 | INFO     | task id: 47898826
[2026-01-09 14:06:58] 2026-01-09 13:05:57,560 | INFO     | errors: (none)
[2026-01-09 14:06:58] 2026-01-09 13:05:57,560 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:06:58] 2026-01-09 13:05:57,561 | INFO     | pilot state: finished 
[2026-01-09 14:06:58] 2026-01-09 13:05:57,561 | INFO     | transexitcode: 0
[2026-01-09 14:06:58] 2026-01-09 13:05:57,561 | INFO     | exeerrorcode: 0
[2026-01-09 14:06:58] 2026-01-09 13:05:57,561 | INFO     | exeerrordiag: 
[2026-01-09 14:06:58] 2026-01-09 13:05:57,561 | INFO     | exitcode: 0
[2026-01-09 14:06:58] 2026-01-09 13:05:57,561 | INFO     | exitmsg: OK
[2026-01-09 14:06:58] 2026-01-09 13:05:57,561 | INFO     | cpuconsumptiontime: 70054 s
[2026-01-09 14:06:58] 2026-01-09 13:05:57,561 | INFO     | nevents: 400
[2026-01-09 14:06:58] 2026-01-09 13:05:57,561 | INFO     | neventsw: 0
[2026-01-09 14:06:58] 2026-01-09 13:05:57,561 | INFO     | pid: 4972
[2026-01-09 14:06:58] 2026-01-09 13:05:57,561 | INFO     | pgrp: 4972
[2026-01-09 14:06:58] 2026-01-09 13:05:57,562 | INFO     | corecount: 8
[2026-01-09 14:06:58] 2026-01-09 13:05:57,562 | INFO     | event service: False
[2026-01-09 14:06:58] 2026-01-09 13:05:57,562 | INFO     | sizes: {0: 2283800, 1: 2283999, 6: 2284261, 12: 2284289, 9233: 2312196, 9234: 2312195, 9235: 2321433, 9243: 2321571}
[2026-01-09 14:06:58] 2026-01-09 13:05:57,562 | INFO     | --------------------------------------------------
[2026-01-09 14:06:58] 2026-01-09 13:05:57,562 | INFO     | 
[2026-01-09 14:06:58] 2026-01-09 13:05:57,562 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-01-09 14:06:58] 2026-01-09 13:05:57,586 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:06:58] 2026-01-09 13:05:57,587 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:06:58] 2026-01-09 13:05:57,587 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:06:58] 2026-01-09 13:05:57,587 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:06:58] 2026-01-09 13:05:57,587 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:06:58] 2026-01-09 13:05:57,587 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:06:58] 2026-01-09 13:05:57,587 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:06:58] 2026-01-09 13:05:57,587 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:06:58] 2026-01-09 13:05:57,587 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:06:58] 2026-01-09 13:05:57,588 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:06:58] 2026-01-09 13:05:57,588 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:06:58] 2026-01-09 13:05:57,588 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:06:58] 2026-01-09 13:05:57,588 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:06:58] 2026-01-09 13:05:57,588 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:06:58] 2026-01-09 13:05:57,588 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:06:58] 2026-01-09 13:05:57,588 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:06:58] 2026-01-09 13:05:57,588 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:06:58] 2026-01-09 13:05:57,588 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:06:58] 2026-01-09 13:05:57,588 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:06:58] 2026-01-09 13:05:57,589 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:06:58] 2026-01-09 13:05:57,589 | INFO     | job 6963153202 has completed (purged errors)
[2026-01-09 14:06:58] 2026-01-09 13:05:57,589 | INFO     | overall cleanup function is called
[2026-01-09 14:06:58] 2026-01-09 13:05:58,597 | INFO     | --- collectZombieJob: --- 10, [4972]
[2026-01-09 14:06:58] 2026-01-09 13:05:58,598 | INFO     | zombie collector waiting for pid 4972
[2026-01-09 14:06:58] 2026-01-09 13:05:58,598 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:06:58] 2026-01-09 13:05:58,598 | INFO     | collected zombie processes
[2026-01-09 14:06:58] 2026-01-09 13:05:58,598 | INFO     | will attempt to kill all subprocesses of pid=4972
[2026-01-09 14:06:58] 2026-01-09 13:05:58,660 | INFO     | process IDs to be killed: [4972] (in reverse order)
[2026-01-09 14:06:58] 2026-01-09 13:05:58,709 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:06:58] 2026-01-09 13:05:58,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:06:58] 2026-01-09 13:05:58,711 | INFO     | did not find any defunct processes belonging to 4972
[2026-01-09 14:06:58] 2026-01-09 13:05:58,713 | INFO     | did not find any defunct processes belonging to 4972
[2026-01-09 14:06:58] 2026-01-09 13:05:58,713 | INFO     | ready for new job
[2026-01-09 14:06:58] 2026-01-09 13:05:58,713 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:06:58] 2026-01-09 13:05:58,715 | INFO     | ***************************************
[2026-01-09 14:06:58] 2026-01-09 13:05:58,715 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:06:58] 2026-01-09 13:05:58,715 | INFO     | ***************************************
[2026-01-09 14:06:58] 2026-01-09 13:05:58,715 | INFO     | 
[2026-01-09 14:06:58] 2026-01-09 13:05:58,716 | INFO     | pilot is running in a VM
[2026-01-09 14:06:58] 2026-01-09 13:05:58,716 | INFO     | architecture information:
[2026-01-09 14:06:58] 2026-01-09 13:05:58,716 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:06:58] 2026-01-09 13:05:58,743 | INFO     | cat /etc/os-release:
[2026-01-09 14:06:58] NAME="CentOS Linux"
[2026-01-09 14:06:58] VERSION="7 (Core)"
[2026-01-09 14:06:58] ID="centos"
[2026-01-09 14:06:58] ID_LIKE="rhel fedora"
[2026-01-09 14:06:58] VERSION_ID="7"
[2026-01-09 14:06:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:06:58] ANSI_COLOR="0;31"
[2026-01-09 14:06:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:06:58] HOME_URL="https://www.centos.org/"
[2026-01-09 14:06:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:06:58] 
[2026-01-09 14:06:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:06:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:06:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:06:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:06:58] 
[2026-01-09 14:06:58] 2026-01-09 13:05:58,743 | INFO     | ***************************************
[2026-01-09 14:06:58] 2026-01-09 13:05:59,247 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-01-09 14:06:58] 2026-01-09 13:05:59,268 | INFO     | sufficient remaining disk space (498297995264 B)
[2026-01-09 14:06:58] 2026-01-09 13:05:59,269 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:06:58] 2026-01-09 13:05:59,269 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:06:58] 2026-01-09 13:05:59,269 | INFO     | update_server=False
[2026-01-09 14:06:58] 2026-01-09 13:05:59,269 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:06:58] 2026-01-09 13:05:59,269 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:06:58] 2026-01-09 13:05:59,677 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 14:06:58] 2026-01-09 13:05:59,678 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 14:06:58] 2026-01-09 13:05:59,678 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:06:58] 2026-01-09 13:05:59,678 | INFO     | will abort loop
[2026-01-09 14:06:58] 2026-01-09 13:05:59,764 | INFO     | all data control threads have been joined
[2026-01-09 14:06:58] 2026-01-09 13:06:00,116 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:06:58] 2026-01-09 13:06:00,220 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:06:58] 2026-01-09 13:06:00,275 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:06:58] 2026-01-09 13:06:00,275 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:06:58] 2026-01-09 13:06:00,506 | INFO     | all job control threads have been joined
[2026-01-09 14:06:58] 2026-01-09 13:06:00,569 | INFO     | [job] validate thread has finished
[2026-01-09 14:06:58] 2026-01-09 13:06:00,595 | INFO     | all payload control threads have been joined
[2026-01-09 14:06:58] 2026-01-09 13:06:00,684 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:06:58] 2026-01-09 13:06:00,752 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:06:58] 2026-01-09 13:06:00,770 | INFO     | [data] control thread has finished
[2026-01-09 14:06:58] 2026-01-09 13:06:00,815 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:06:58] 2026-01-09 13:06:00,860 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:06:58] 2026-01-09 13:06:00,922 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:06:58] 2026-01-09 13:06:00,974 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:06:58] 2026-01-09 13:06:00,976 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:06:58] 2026-01-09 13:06:01,196 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:06:58] 2026-01-09 13:06:01,511 | INFO     | [job] control thread has finished
[2026-01-09 14:06:58] 2026-01-09 13:06:01,600 | INFO     | [payload] control thread has finished
[2026-01-09 14:06:58] 2026-01-09 13:06:02,122 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:06:58] 2026-01-09 13:06:04,226 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:06:58] 2026-01-09 13:06:29,311 | INFO     | PID=30924 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 14:06:58] 2026-01-09 13:06:29,311 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:06:58] 2026-01-09 13:06:29,312 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:06:58] 2026-01-09 13:06:29,312 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:06:58] 2026-01-09 13:06:53,348 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:06:58] 2026-01-09 13:06:53,444 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140227118929728)>', '<ExcThread(monitor, started 140226303350528)>']
[2026-01-09 14:06:58] 2026-01-09 13:06:54,441 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:06:58] 2026-01-09 13:06:54,441 | INFO     | [monitor] control thread has ended
[2026-01-09 14:06:58] 2026-01-09 13:06:58,469 | INFO     | all workflow threads have been joined
[2026-01-09 14:06:58] 2026-01-09 13:06:58,470 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:06:58] 2026-01-09 13:06:58,470 | INFO     | traces error code: 0
[2026-01-09 14:06:58] 2026-01-09 13:06:58,470 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:06:58] 2026-01-09 13:06:58,621 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:06:58] 2026-01-09 13:06:58,628 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:06:58] 2026-01-09 13:06:58,634 [wrapper] pilotpid: 30924
[2026-01-09 14:06:58] 2026-01-09 13:06:58,641 [wrapper] Pilot exit status: 0
[2026-01-09 14:06:58] 2026-01-09 13:06:58,669 [wrapper] pandaids: 6963153202
[2026-01-09 14:06:58] 2026-01-09 13:06:58,737 [wrapper] cleanup supervisor_pilot 21735 30925
[2026-01-09 14:06:58] 2026-01-09 13:06:58,746 [wrapper] Test setup, not cleaning
[2026-01-09 14:06:58] 2026-01-09 13:06:58,751 [wrapper] apfmon messages muted
[2026-01-09 14:06:58] 2026-01-09 13:06:58,758 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:06:58] 2026-01-09 13:06:58,763 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:06:58]  *** Error codes and diagnostics ***
[2026-01-09 14:06:58]     "exeErrorCode": 0,
[2026-01-09 14:06:58]     "exeErrorDiag": "",
[2026-01-09 14:06:58]     "pilotErrorCode": 0,
[2026-01-09 14:06:58]     "pilotErrorDiag": "",
[2026-01-09 14:06:58]  *** Listing of results directory ***
[2026-01-09 14:06:58] total 436160
[2026-01-09 14:06:58] -rw-r--r--. 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 14:06:58] -rwx------. 1 boinc boinc     36322 Jan  8 20:09 runpilot2-wrapper.sh
[2026-01-09 14:06:58] -rw-r--r--. 1 boinc boinc      5112 Jan  8 20:11 queuedata.json
[2026-01-09 14:06:58] -rw-r--r--. 1 boinc boinc       100 Jan  9 11:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:06:58] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 11:31 run_atlas
[2026-01-09 14:06:58] -rw-r--r--. 1 boinc boinc       105 Jan  9 11:31 job.xml
[2026-01-09 14:06:58] -rw-r--r--. 2 boinc boinc 221578609 Jan  9 11:31 EVNT.47898824._001156.pool.root.1
[2026-01-09 14:06:58] -rw-r--r--. 1 boinc boinc      6389 Jan  9 11:31 init_data.xml
[2026-01-09 14:06:58] -rw-r--r--. 2 boinc boinc     15847 Jan  9 11:31 start_atlas.sh
[2026-01-09 14:06:58] drwxrwx--x. 2 boinc boinc        68 Jan  9 11:31 shared
[2026-01-09 14:06:58] -rw-r--r--. 2 boinc boinc    592400 Jan  9 11:31 input.tar.gz
[2026-01-09 14:06:58] -rw-r--r--. 1 boinc boinc         0 Jan  9 11:31 boinc_lockfile
[2026-01-09 14:06:58] -rw-r--r--. 1 boinc boinc      2520 Jan  9 11:31 pandaJob.out
[2026-01-09 14:06:58] -rw-------. 1 boinc boinc    989369 Jan  9 11:31 agis_schedconf.cvmfs.json
[2026-01-09 14:06:58] -rw-------. 1 boinc boinc   1516240 Jan  9 11:31 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:06:58] drwx------. 5 boinc boinc      4096 Jan  9 11:31 pilot3
[2026-01-09 14:06:58] -rw-------. 1 boinc boinc 217862953 Jan  9 14:05 HITS.47898826._029897.pool.root.1
[2026-01-09 14:06:58] -rw-r--r--. 1 boinc boinc       530 Jan  9 14:05 boinc_task_state.xml
[2026-01-09 14:06:58] -rw-------. 1 boinc boinc        95 Jan  9 14:05 pilot_heartbeat.json
[2026-01-09 14:06:58] -rw-------. 1 boinc boinc      1028 Jan  9 14:05 memory_monitor_summary.json
[2026-01-09 14:06:58] -rw-------. 1 boinc boinc    401727 Jan  9 14:05 log.47898826._029897.job.log.tgz.1
[2026-01-09 14:06:58] -rw-------. 1 boinc boinc      7773 Jan  9 14:05 heartbeat.json
[2026-01-09 14:06:58] -rw-r--r--. 1 boinc boinc        27 Jan  9 14:06 wrapper_checkpoint.txt
[2026-01-09 14:06:58] -rw-r--r--. 1 boinc boinc      8192 Jan  9 14:06 boinc_mmap_file
[2026-01-09 14:06:58] -rw-------. 1 boinc boinc      4995 Jan  9 14:06 pilotlog.txt
[2026-01-09 14:06:58] -rw-------. 1 boinc boinc   1241609 Jan  9 14:06 log.47898826._029897.job.log.1
[2026-01-09 14:06:58] -rw-------. 1 boinc boinc       357 Jan  9 14:06 output.list
[2026-01-09 14:06:58] -rw-r--r--. 1 boinc boinc       620 Jan  9 14:06 runtime_log
[2026-01-09 14:06:58] -rw-------. 1 boinc boinc   1658880 Jan  9 14:06 result.tar.gz
[2026-01-09 14:06:58] -rw-r--r--. 1 boinc boinc      8816 Jan  9 14:06 runtime_log.err
[2026-01-09 14:06:58] -rw-------. 1 boinc boinc       652 Jan  9 14:06 HeWMDm0YAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm92fKDmYJLGUo.diag
[2026-01-09 14:06:58] -rw-r--r--. 1 boinc boinc     20717 Jan  9 14:06 stderr.txt
[2026-01-09 14:06:58] HITS file was successfully produced:
[2026-01-09 14:06:58] -rw-------. 1 boinc boinc 217862953 Jan  9 14:05 shared/HITS.pool.root.1
[2026-01-09 14:06:58]  *** Contents of shared directory: ***
[2026-01-09 14:06:58] total 431364
[2026-01-09 14:06:58] -rw-r--r--. 2 boinc boinc 221578609 Jan  9 11:31 ATLAS.root_0
[2026-01-09 14:06:58] -rw-r--r--. 2 boinc boinc     15847 Jan  9 11:31 start_atlas.sh
[2026-01-09 14:06:58] -rw-r--r--. 2 boinc boinc    592400 Jan  9 11:31 input.tar.gz
[2026-01-09 14:06:58] -rw-------. 1 boinc boinc 217862953 Jan  9 14:05 HITS.pool.root.1
[2026-01-09 14:06:58] -rw-------. 1 boinc boinc   1658880 Jan  9 14:06 result.tar.gz
14:07:00 (27156): run_atlas exited; CPU time 70112.495594
14:07:00 (27156): called boinc_finish(0)

</stderr_txt>
]]>

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