Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:25:56 (24018): wrapper (7.7.26015): starting
11:25:56 (24018): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 11:25:56] Arguments: --nthreads 8
[2026-01-09 11:25:56] Threads: 8
[2026-01-09 11:25:56] Checking for CVMFS
[2026-01-09 11:25:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 11:25:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 11:25:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 11:25:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 11:25:57] 2.11.2.0 898 35275 94900 154940 1 57 18583936 25165824 0 130560 0 14517982 99.814 12638110 3803 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 11:25:57] CVMFS is ok
[2026-01-09 11:25:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 11:25:57] Checking for apptainer binary...
[2026-01-09 11:25:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 11:25:57] Running /usr/bin/apptainer --version
[2026-01-09 11:25:57] apptainer version 1.3.2-1.el7
[2026-01-09 11:25:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 11:25:58] cg-vwn390.simple-grid.lan
[2026-01-09 11:25:58] apptainer works
[2026-01-09 11:25:58] Set ATHENA_PROC_NUMBER=8
[2026-01-09 11:25:58] Set ATHENA_CORE_NUMBER=8
[2026-01-09 11:25:58] Starting ATLAS job with PandaID=6963153369
[2026-01-09 11:25:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:00:35]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:00:35] 2026-01-09 12:59:57,312 | INFO     | time since job start (9224s) is within the limit (349056.0s)
[2026-01-09 14:00:35] 2026-01-09 12:59:57,711 | WARNING  | process 1808 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 14:00:35] 2026-01-09 12:59:57,712 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6963153369/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 14:00:35] 2026-01-09 12:59:57,768 | INFO     | number of running child processes to parent process 1808: 1
[2026-01-09 14:00:35] 2026-01-09 12:59:57,768 | INFO     | maximum number of monitored processes: 6
[2026-01-09 14:00:35] 2026-01-09 12:59:59,318 | INFO     | time since job start (9226s) is within the limit (349056.0s)
[2026-01-09 14:00:35] 2026-01-09 13:00:00,269 | INFO     | monitor loop #628: job 0:6963153369 is in state 'finished'
[2026-01-09 14:00:35] 2026-01-09 13:00:00,269 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 14:00:35] 2026-01-09 13:00:01,324 | INFO     | time since job start (9228s) is within the limit (349056.0s)
[2026-01-09 14:00:35] 2026-01-09 13:00:01,713 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 14:00:35] 2026-01-09 13:00:01,714 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 14:00:35] 2026-01-09 13:00:01,716 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6963153369/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 14:00:35] 2026-01-09 13:00:01,717 | INFO     | extracted standard info from prmon json
[2026-01-09 14:00:35] 2026-01-09 13:00:01,717 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 14:00:35] 2026-01-09 13:00:01,717 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 14:00:35] 2026-01-09 13:00:01,717 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 14:00:35] 2026-01-09 13:00:01,718 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 14:00:35] 2026-01-09 13:00:01,721 | INFO     | fitting pss+swap vs Time
[2026-01-09 14:00:35] 2026-01-09 13:00:01,722 | INFO     | sum of square deviations: 1067554900.0
[2026-01-09 14:00:35] 2026-01-09 13:00:01,723 | INFO     | sum of deviations: -4182776770.999999
[2026-01-09 14:00:35] 2026-01-09 13:00:01,723 | INFO     | mean x: 1767958978.0
[2026-01-09 14:00:35] 2026-01-09 13:00:01,723 | INFO     | mean y: 2529316.668874172
[2026-01-09 14:00:35] 2026-01-09 13:00:01,723 | INFO     | intersect: 6929552690.604301
[2026-01-09 14:00:35] 2026-01-09 13:00:01,723 | INFO     | chi2: 1.6955976960740113
[2026-01-09 14:00:35] 2026-01-09 13:00:01,724 | INFO     | sum of square deviations: 964976232.5
[2026-01-09 14:00:35] 2026-01-09 13:00:01,725 | INFO     | sum of deviations: -3801659354.4999986
[2026-01-09 14:00:35] 2026-01-09 13:00:01,725 | INFO     | mean x: 1767958825.5
[2026-01-09 14:00:35] 2026-01-09 13:00:01,725 | INFO     | mean y: 2529887.5684931506
[2026-01-09 14:00:35] 2026-01-09 13:00:01,725 | INFO     | intersect: 6967651909.196011
[2026-01-09 14:00:35] 2026-01-09 13:00:01,726 | INFO     | chi2: 1.6954453675282206
[2026-01-09 14:00:35] 2026-01-09 13:00:01,726 | INFO     | current chi2=1.6954453675282206 (change=0.008983766971577455 %)
[2026-01-09 14:00:35] 2026-01-09 13:00:01,726 | INFO     | right removable region: 145
[2026-01-09 14:00:35] 2026-01-09 13:00:01,726 | INFO     | sum of square deviations: 964976232.5
[2026-01-09 14:00:35] 2026-01-09 13:00:01,727 | INFO     | sum of deviations: -27531173004.999996
[2026-01-09 14:00:35] 2026-01-09 13:00:01,727 | INFO     | mean x: 1767959130.5
[2026-01-09 14:00:35] 2026-01-09 13:00:01,727 | INFO     | mean y: 2563506.698630137
[2026-01-09 14:00:35] 2026-01-09 13:00:01,728 | INFO     | intersect: 50443172350.9842
[2026-01-09 14:00:35] 2026-01-09 13:00:01,728 | INFO     | chi2: 0.17051647855566932
[2026-01-09 14:00:35] 2026-01-09 13:00:01,728 | INFO     | current chi2=0.17051647855566932 (change=89.94357689029165 %)
[2026-01-09 14:00:35] 2026-01-09 13:00:01,728 | INFO     | sum of square deviations: 869188390.0
[2026-01-09 14:00:35] 2026-01-09 13:00:01,729 | INFO     | sum of deviations: -27268907591.999996
[2026-01-09 14:00:35] 2026-01-09 13:00:01,730 | INFO     | mean x: 1767959283.0
[2026-01-09 14:00:35] 2026-01-09 13:00:01,730 | INFO     | mean y: 2563001.503546099
[2026-01-09 14:00:35] 2026-01-09 13:00:01,730 | INFO     | intersect: 55468465295.188774
[2026-01-09 14:00:35] 2026-01-09 13:00:01,730 | INFO     | chi2: 0.14798360978941955
[2026-01-09 14:00:35] 2026-01-09 13:00:01,730 | INFO     | current chi2=0.14798360978941955 (change=13.214481648407581 %)
[2026-01-09 14:00:35] 2026-01-09 13:00:01,730 | INFO     | left removable region: 20
[2026-01-09 14:00:35] 2026-01-09 13:00:01,731 | INFO     | sum of square deviations: 605592750.0
[2026-01-09 14:00:35] 2026-01-09 13:00:01,731 | INFO     | sum of deviations: -17892291493.999996
[2026-01-09 14:00:35] 2026-01-09 13:00:01,732 | INFO     | mean x: 1767959405.0
[2026-01-09 14:00:35] 2026-01-09 13:00:01,732 | INFO     | mean y: 2549565.952
[2026-01-09 14:00:35] 2026-01-09 13:00:01,732 | INFO     | intersect: 52237066943.87437
[2026-01-09 14:00:35] 2026-01-09 13:00:01,732 | INFO     | chi2: 0.13265422866197368
[2026-01-09 14:00:35] 2026-01-09 13:00:01,732 | INFO     | current memory leak: -29.55 B/s (using 125 data points, chi2=0.13)
[2026-01-09 14:00:35] 2026-01-09 13:00:01,733 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-01-09 14:00:35] 2026-01-09 13:00:01,733 | INFO     | ..............................
[2026-01-09 14:00:35] 2026-01-09 13:00:01,733 | INFO     | . Timing measurements:
[2026-01-09 14:00:35] 2026-01-09 13:00:01,733 | INFO     | . get job = 0 s
[2026-01-09 14:00:35] 2026-01-09 13:00:01,733 | INFO     | . initial setup = 2 s
[2026-01-09 14:00:35] 2026-01-09 13:00:01,733 | INFO     | . payload setup = 6 s
[2026-01-09 14:00:35] 2026-01-09 13:00:01,734 | INFO     | . stage-in = 0 s
[2026-01-09 14:00:35] 2026-01-09 13:00:01,734 | INFO     | . payload execution = 9194 s
[2026-01-09 14:00:35] 2026-01-09 13:00:01,734 | INFO     | . stage-out = 1 s
[2026-01-09 14:00:35] 2026-01-09 13:00:01,734 | INFO     | . log creation = 0 s
[2026-01-09 14:00:35] 2026-01-09 13:00:01,734 | INFO     | ..............................
[2026-01-09 14:00:35] 2026-01-09 13:00:01,848 | INFO     | 
[2026-01-09 14:00:35] 2026-01-09 13:00:01,848 | INFO     | job summary report
[2026-01-09 14:00:35] 2026-01-09 13:00:01,848 | INFO     | --------------------------------------------------
[2026-01-09 14:00:35] 2026-01-09 13:00:01,849 | INFO     | PanDA job id: 6963153369
[2026-01-09 14:00:35] 2026-01-09 13:00:01,849 | INFO     | task id: 47898826
[2026-01-09 14:00:35] 2026-01-09 13:00:01,849 | INFO     | errors: (none)
[2026-01-09 14:00:35] 2026-01-09 13:00:01,849 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:00:35] 2026-01-09 13:00:01,849 | INFO     | pilot state: finished 
[2026-01-09 14:00:35] 2026-01-09 13:00:01,849 | INFO     | transexitcode: 0
[2026-01-09 14:00:35] 2026-01-09 13:00:01,849 | INFO     | exeerrorcode: 0
[2026-01-09 14:00:35] 2026-01-09 13:00:01,849 | INFO     | exeerrordiag: 
[2026-01-09 14:00:35] 2026-01-09 13:00:01,849 | INFO     | exitcode: 0
[2026-01-09 14:00:35] 2026-01-09 13:00:01,849 | INFO     | exitmsg: OK
[2026-01-09 14:00:35] 2026-01-09 13:00:01,849 | INFO     | cpuconsumptiontime: 69351 s
[2026-01-09 14:00:35] 2026-01-09 13:00:01,849 | INFO     | nevents: 400
[2026-01-09 14:00:35] 2026-01-09 13:00:01,850 | INFO     | neventsw: 0
[2026-01-09 14:00:35] 2026-01-09 13:00:01,850 | INFO     | pid: 1808
[2026-01-09 14:00:35] 2026-01-09 13:00:01,850 | INFO     | pgrp: 1808
[2026-01-09 14:00:35] 2026-01-09 13:00:01,850 | INFO     | corecount: 8
[2026-01-09 14:00:35] 2026-01-09 13:00:01,850 | INFO     | event service: False
[2026-01-09 14:00:35] 2026-01-09 13:00:01,850 | INFO     | sizes: {0: 2283971, 5: 2284233, 11: 2284289, 9204: 2312195, 9206: 2321249, 9212: 2321387}
[2026-01-09 14:00:35] 2026-01-09 13:00:01,850 | INFO     | --------------------------------------------------
[2026-01-09 14:00:35] 2026-01-09 13:00:01,850 | INFO     | 
[2026-01-09 14:00:35] 2026-01-09 13:00:01,850 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-09 14:00:35] 2026-01-09 13:00:01,874 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:00:35] 2026-01-09 13:00:01,874 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:00:35] 2026-01-09 13:00:01,874 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:00:35] 2026-01-09 13:00:01,874 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:00:35] 2026-01-09 13:00:01,874 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:00:35] 2026-01-09 13:00:01,875 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:00:35] 2026-01-09 13:00:01,875 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:00:35] 2026-01-09 13:00:01,875 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:00:35] 2026-01-09 13:00:01,875 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:00:35] 2026-01-09 13:00:01,875 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:00:35] 2026-01-09 13:00:01,875 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:00:35] 2026-01-09 13:00:01,875 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:00:35] 2026-01-09 13:00:01,875 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:00:35] 2026-01-09 13:00:01,876 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:00:35] 2026-01-09 13:00:01,876 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:00:35] 2026-01-09 13:00:01,876 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:00:35] 2026-01-09 13:00:01,876 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:00:35] 2026-01-09 13:00:01,876 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:00:35] 2026-01-09 13:00:01,876 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:00:35] 2026-01-09 13:00:01,876 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:00:35] 2026-01-09 13:00:01,876 | INFO     | job 6963153369 has completed (purged errors)
[2026-01-09 14:00:35] 2026-01-09 13:00:01,877 | INFO     | overall cleanup function is called
[2026-01-09 14:00:35] 2026-01-09 13:00:02,885 | INFO     | --- collectZombieJob: --- 10, [1808]
[2026-01-09 14:00:35] 2026-01-09 13:00:02,885 | INFO     | zombie collector waiting for pid 1808
[2026-01-09 14:00:35] 2026-01-09 13:00:02,885 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:00:35] 2026-01-09 13:00:02,885 | INFO     | collected zombie processes
[2026-01-09 14:00:35] 2026-01-09 13:00:02,885 | INFO     | will attempt to kill all subprocesses of pid=1808
[2026-01-09 14:00:35] 2026-01-09 13:00:02,947 | INFO     | process IDs to be killed: [1808] (in reverse order)
[2026-01-09 14:00:35] 2026-01-09 13:00:02,991 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:00:35] 2026-01-09 13:00:02,992 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:00:35] 2026-01-09 13:00:02,994 | INFO     | did not find any defunct processes belonging to 1808
[2026-01-09 14:00:35] 2026-01-09 13:00:02,995 | INFO     | did not find any defunct processes belonging to 1808
[2026-01-09 14:00:35] 2026-01-09 13:00:02,995 | INFO     | ready for new job
[2026-01-09 14:00:35] 2026-01-09 13:00:02,996 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:00:35] 2026-01-09 13:00:02,997 | INFO     | ***************************************
[2026-01-09 14:00:35] 2026-01-09 13:00:02,997 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:00:35] 2026-01-09 13:00:02,998 | INFO     | ***************************************
[2026-01-09 14:00:35] 2026-01-09 13:00:02,998 | INFO     | 
[2026-01-09 14:00:35] 2026-01-09 13:00:02,998 | INFO     | pilot is running in a VM
[2026-01-09 14:00:35] 2026-01-09 13:00:02,998 | INFO     | architecture information:
[2026-01-09 14:00:35] 2026-01-09 13:00:02,999 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:00:35] 2026-01-09 13:00:03,017 | INFO     | cat /etc/os-release:
[2026-01-09 14:00:35] NAME="CentOS Linux"
[2026-01-09 14:00:35] VERSION="7 (Core)"
[2026-01-09 14:00:35] ID="centos"
[2026-01-09 14:00:35] ID_LIKE="rhel fedora"
[2026-01-09 14:00:35] VERSION_ID="7"
[2026-01-09 14:00:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:00:35] ANSI_COLOR="0;31"
[2026-01-09 14:00:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:00:35] HOME_URL="https://www.centos.org/"
[2026-01-09 14:00:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:00:35] 
[2026-01-09 14:00:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:00:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:00:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:00:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:00:35] 
[2026-01-09 14:00:35] 2026-01-09 13:00:03,017 | INFO     | ***************************************
[2026-01-09 14:00:35] 2026-01-09 13:00:03,521 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-09 14:00:35] 2026-01-09 13:00:03,540 | INFO     | sufficient remaining disk space (498148048896 B)
[2026-01-09 14:00:35] 2026-01-09 13:00:03,541 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:00:35] 2026-01-09 13:00:03,541 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:00:35] 2026-01-09 13:00:03,541 | INFO     | update_server=False
[2026-01-09 14:00:35] 2026-01-09 13:00:03,541 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:00:35] 2026-01-09 13:00:03,541 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:00:35] 2026-01-09 13:00:03,778 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:00:35] 2026-01-09 13:00:03,778 | INFO     | aborting loop
[2026-01-09 14:00:35] 2026-01-09 13:00:03,909 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:00:35] 2026-01-09 13:00:03,976 | INFO     | all data control threads have been joined
[2026-01-09 14:00:35] 2026-01-09 13:00:04,088 | INFO     | all job control threads have been joined
[2026-01-09 14:00:35] 2026-01-09 13:00:04,547 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:00:35] 2026-01-09 13:00:04,547 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:00:35] 2026-01-09 13:00:04,784 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:00:35] 2026-01-09 13:00:04,921 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:00:35] 2026-01-09 13:00:04,982 | INFO     | [data] control thread has finished
[2026-01-09 14:00:35] 2026-01-09 13:00:05,042 | INFO     | all payload control threads have been joined
[2026-01-09 14:00:35] 2026-01-09 13:00:05,080 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:00:35] 2026-01-09 13:00:05,091 | INFO     | [job] control thread has finished
[2026-01-09 14:00:35] 2026-01-09 13:00:05,206 | INFO     | [job] validate thread has finished
[2026-01-09 14:00:35] 2026-01-09 13:00:05,333 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:00:35] 2026-01-09 13:00:05,534 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:00:35] 2026-01-09 13:00:05,721 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:00:35] 2026-01-09 13:00:05,893 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:00:35] 2026-01-09 13:00:05,915 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:00:35] 2026-01-09 13:00:06,048 | INFO     | [payload] control thread has finished
[2026-01-09 14:00:35] 2026-01-09 13:00:06,127 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:00:35] 2026-01-09 13:00:06,514 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:00:35] 2026-01-09 13:00:10,520 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:00:35] 2026-01-09 13:00:28,116 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:00:35] 2026-01-09 13:00:30,068 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139929184876352)>', '<ExcThread(monitor, started 139928138667776)>']
[2026-01-09 14:00:35] 2026-01-09 13:00:34,412 | INFO     | PID=27743 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 14:00:35] 2026-01-09 13:00:34,413 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:00:35] 2026-01-09 13:00:34,413 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:00:35] 2026-01-09 13:00:34,413 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:00:35] 2026-01-09 13:00:34,413 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:00:35] 2026-01-09 13:00:34,413 | INFO     | [monitor] control thread has ended
[2026-01-09 14:00:35] 2026-01-09 13:00:35,094 | INFO     | all workflow threads have been joined
[2026-01-09 14:00:35] 2026-01-09 13:00:35,094 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:00:35] 2026-01-09 13:00:35,095 | INFO     | traces error code: 0
[2026-01-09 14:00:35] 2026-01-09 13:00:35,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:00:35] 2026-01-09 13:00:35,225 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:00:35] 2026-01-09 13:00:35,229 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:00:35] 2026-01-09 13:00:35,232 [wrapper] pilotpid: 27743
[2026-01-09 14:00:35] 2026-01-09 13:00:35,236 [wrapper] Pilot exit status: 0
[2026-01-09 14:00:35] 2026-01-09 13:00:35,249 [wrapper] pandaids: 6963153369
[2026-01-09 14:00:35] 2026-01-09 13:00:35,280 [wrapper] cleanup supervisor_pilot 18563 27744
[2026-01-09 14:00:35] 2026-01-09 13:00:35,284 [wrapper] Test setup, not cleaning
[2026-01-09 14:00:35] 2026-01-09 13:00:35,288 [wrapper] apfmon messages muted
[2026-01-09 14:00:35] 2026-01-09 13:00:35,291 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:00:35] 2026-01-09 13:00:35,294 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:00:35]  *** Error codes and diagnostics ***
[2026-01-09 14:00:35]     "exeErrorCode": 0,
[2026-01-09 14:00:35]     "exeErrorDiag": "",
[2026-01-09 14:00:35]     "pilotErrorCode": 0,
[2026-01-09 14:00:35]     "pilotErrorDiag": "",
[2026-01-09 14:00:35]  *** Listing of results directory ***
[2026-01-09 14:00:35] total 440332
[2026-01-09 14:00:35] -rw-r--r--. 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 14:00:35] -rwx------. 1 boinc boinc     36322 Jan  8 20:06 runpilot2-wrapper.sh
[2026-01-09 14:00:35] -rw-r--r--. 1 boinc boinc      5112 Jan  8 20:06 queuedata.json
[2026-01-09 14:00:35] -rw-r--r--. 1 boinc boinc       100 Jan  9 11:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:00:35] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 11:25 run_atlas
[2026-01-09 14:00:35] -rw-r--r--. 1 boinc boinc       105 Jan  9 11:25 job.xml
[2026-01-09 14:00:35] -rw-r--r--. 1 boinc boinc      6390 Jan  9 11:25 init_data.xml
[2026-01-09 14:00:35] -rw-r--r--. 2 boinc boinc 223081808 Jan  9 11:25 EVNT.47898824._001162.pool.root.1
[2026-01-09 14:00:35] -rw-r--r--. 2 boinc boinc     15847 Jan  9 11:25 start_atlas.sh
[2026-01-09 14:00:35] drwxrwx--x. 2 boinc boinc        68 Jan  9 11:25 shared
[2026-01-09 14:00:35] -rw-r--r--. 2 boinc boinc    592387 Jan  9 11:25 input.tar.gz
[2026-01-09 14:00:35] -rw-r--r--. 1 boinc boinc         0 Jan  9 11:25 boinc_lockfile
[2026-01-09 14:00:35] -rw-r--r--. 1 boinc boinc      2520 Jan  9 11:25 pandaJob.out
[2026-01-09 14:00:35] -rw-------. 1 boinc boinc    989369 Jan  9 11:26 agis_schedconf.cvmfs.json
[2026-01-09 14:00:35] -rw-------. 1 boinc boinc   1516240 Jan  9 11:26 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:00:35] drwx------. 5 boinc boinc      4096 Jan  9 11:26 pilot3
[2026-01-09 14:00:35] -rw-------. 1 boinc boinc 220654504 Jan  9 13:59 HITS.47898826._030042.pool.root.1
[2026-01-09 14:00:35] -rw-r--r--. 1 boinc boinc       530 Jan  9 13:59 boinc_task_state.xml
[2026-01-09 14:00:35] -rw-------. 1 boinc boinc      1009 Jan  9 13:59 memory_monitor_summary.json
[2026-01-09 14:00:35] -rw-------. 1 boinc boinc    393630 Jan  9 13:59 log.47898826._030042.job.log.tgz.1
[2026-01-09 14:00:35] -rw-------. 1 boinc boinc      7772 Jan  9 14:00 heartbeat.json
[2026-01-09 14:00:35] -rw-r--r--. 1 boinc boinc        27 Jan  9 14:00 wrapper_checkpoint.txt
[2026-01-09 14:00:35] -rw-r--r--. 1 boinc boinc      8192 Jan  9 14:00 boinc_mmap_file
[2026-01-09 14:00:35] -rw-------. 1 boinc boinc        95 Jan  9 14:00 pilot_heartbeat.json
[2026-01-09 14:00:35] -rw-------. 1 boinc boinc      4809 Jan  9 14:00 pilotlog.txt
[2026-01-09 14:00:35] -rw-------. 1 boinc boinc   1237613 Jan  9 14:00 log.47898826._030042.job.log.1
[2026-01-09 14:00:35] -rw-------. 1 boinc boinc       357 Jan  9 14:00 output.list
[2026-01-09 14:00:35] -rw-r--r--. 1 boinc boinc       620 Jan  9 14:00 runtime_log
[2026-01-09 14:00:35] -rw-------. 1 boinc boinc   1648640 Jan  9 14:00 result.tar.gz
[2026-01-09 14:00:35] -rw-------. 1 boinc boinc       652 Jan  9 14:00 XFRODmuVAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpvfKDmNa8cSn.diag
[2026-01-09 14:00:35] -rw-r--r--. 1 boinc boinc      8816 Jan  9 14:00 runtime_log.err
[2026-01-09 14:00:35] -rw-r--r--. 1 boinc boinc     20951 Jan  9 14:00 stderr.txt
[2026-01-09 14:00:35] HITS file was successfully produced:
[2026-01-09 14:00:35] -rw-------. 1 boinc boinc 220654504 Jan  9 13:59 shared/HITS.pool.root.1
[2026-01-09 14:00:35]  *** Contents of shared directory: ***
[2026-01-09 14:00:35] total 435548
[2026-01-09 14:00:35] -rw-r--r--. 2 boinc boinc 223081808 Jan  9 11:25 ATLAS.root_0
[2026-01-09 14:00:35] -rw-r--r--. 2 boinc boinc     15847 Jan  9 11:25 start_atlas.sh
[2026-01-09 14:00:35] -rw-r--r--. 2 boinc boinc    592387 Jan  9 11:25 input.tar.gz
[2026-01-09 14:00:35] -rw-------. 1 boinc boinc 220654504 Jan  9 13:59 HITS.pool.root.1
[2026-01-09 14:00:35] -rw-------. 1 boinc boinc   1648640 Jan  9 14:00 result.tar.gz
14:00:36 (24018): run_atlas exited; CPU time 69410.004291
14:00:36 (24018): called boinc_finish(0)

</stderr_txt>
]]>

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