Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:34:05 (9756): wrapper (7.7.26015): starting
11:34:05 (9756): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 11:34:05] Arguments: --nthreads 8
[2026-01-09 11:34:05] Threads: 8
[2026-01-09 11:34:05] Checking for CVMFS
[2026-01-09 11:34:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 11:34:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 11:34:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 11:34:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 11:34:05] 2.11.2.0 20308 35300 120440 154940 0 56 18368835 25165824 0 130560 0 16966635 99.821 10744583 2594 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 11:34:05] CVMFS is ok
[2026-01-09 11:34:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 11:34:05] Checking for apptainer binary...
[2026-01-09 11:34:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 11:34:05] Running /usr/bin/apptainer --version
[2026-01-09 11:34:05] apptainer version 1.3.2-1.el7
[2026-01-09 11:34:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 11:34:07] cg-vwn476.simple-grid.lan
[2026-01-09 11:34:07] apptainer works
[2026-01-09 11:34:07] Set ATHENA_PROC_NUMBER=8
[2026-01-09 11:34:07] Set ATHENA_CORE_NUMBER=8
[2026-01-09 11:34:07] Starting ATLAS job with PandaID=6963153478
[2026-01-09 11:34:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 13:59:43]  *** The last 200 lines of the pilot log: ***
[2026-01-09 13:59:43] 2026-01-09 12:58:42,165 | INFO     | time since job start (8659s) is within the limit (349056.0s)
[2026-01-09 13:59:43] 2026-01-09 12:58:42,437 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 13:59:43] 2026-01-09 12:58:42,438 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-09 13:59:43] 2026-01-09 12:58:42,439 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6963153478/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 13:59:43] 2026-01-09 12:58:42,440 | INFO     | extracted standard info from prmon json
[2026-01-09 13:59:43] 2026-01-09 12:58:42,440 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 13:59:43] 2026-01-09 12:58:42,440 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 13:59:43] 2026-01-09 12:58:42,441 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 13:59:43] 2026-01-09 12:58:42,441 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 13:59:43] 2026-01-09 12:58:42,444 | INFO     | fitting pss+swap vs Time
[2026-01-09 13:59:43] 2026-01-09 12:58:42,444 | INFO     | sum of square deviations: 887813855.5
[2026-01-09 13:59:43] 2026-01-09 12:58:42,445 | INFO     | sum of deviations: -7752527454.000002
[2026-01-09 13:59:43] 2026-01-09 12:58:42,445 | INFO     | mean x: 1767959196.5
[2026-01-09 13:59:43] 2026-01-09 12:58:42,445 | INFO     | mean y: 2504721.563380282
[2026-01-09 13:59:43] 2026-01-09 12:58:42,445 | INFO     | intersect: 15440596978.750544
[2026-01-09 13:59:43] 2026-01-09 12:58:42,446 | INFO     | chi2: 2.390531607382541
[2026-01-09 13:59:43] 2026-01-09 12:58:42,446 | INFO     | sum of square deviations: 797291228.0
[2026-01-09 13:59:43] 2026-01-09 12:58:42,447 | INFO     | sum of deviations: 1976502602.0000026
[2026-01-09 13:59:43] 2026-01-09 12:58:42,447 | INFO     | mean x: 1767959044.0
[2026-01-09 13:59:43] 2026-01-09 12:58:42,447 | INFO     | mean y: 2520662.1532846717
[2026-01-09 13:59:43] 2026-01-09 12:58:42,447 | INFO     | intersect: -4380288941.134407
[2026-01-09 13:59:43] 2026-01-09 12:58:42,447 | INFO     | chi2: 1.6298365533103434
[2026-01-09 13:59:43] 2026-01-09 12:58:42,448 | INFO     | current chi2=1.6298365533103434 (change=31.821166962318625 %)
[2026-01-09 13:59:43] 2026-01-09 12:58:42,448 | INFO     | sum of square deviations: 713140813.0
[2026-01-09 13:59:43] 2026-01-09 12:58:42,449 | INFO     | sum of deviations: 2164289424.499998
[2026-01-09 13:59:43] 2026-01-09 12:58:42,449 | INFO     | mean x: 1767958891.5
[2026-01-09 13:59:43] 2026-01-09 12:58:42,449 | INFO     | mean y: 2521002.643939394
[2026-01-09 13:59:43] 2026-01-09 12:58:42,449 | INFO     | intersect: -5363003816.679772
[2026-01-09 13:59:43] 2026-01-09 12:58:42,449 | INFO     | chi2: 1.6312870223537723
[2026-01-09 13:59:43] 2026-01-09 12:58:42,449 | INFO     | current chi2=1.6312870223537723 (change=-0.08899475474905166 %)
[2026-01-09 13:59:43] 2026-01-09 12:58:42,449 | INFO     | right removable region: 131
[2026-01-09 13:59:43] 2026-01-09 12:58:42,450 | INFO     | sum of square deviations: 797291228.0
[2026-01-09 13:59:43] 2026-01-09 12:58:42,450 | INFO     | sum of deviations: -28831666225.999992
[2026-01-09 13:59:43] 2026-01-09 12:58:42,451 | INFO     | mean x: 1767959349.0
[2026-01-09 13:59:43] 2026-01-09 12:58:42,451 | INFO     | mean y: 2539639.3649635036
[2026-01-09 13:59:43] 2026-01-09 12:58:42,451 | INFO     | intersect: 63935531827.64002
[2026-01-09 13:59:43] 2026-01-09 12:58:42,451 | INFO     | chi2: 0.9331210474590408
[2026-01-09 13:59:43] 2026-01-09 12:58:42,451 | INFO     | current chi2=0.9331210474590408 (change=60.96596068517409 %)
[2026-01-09 13:59:43] 2026-01-09 12:58:42,451 | INFO     | sum of square deviations: 713140813.0
[2026-01-09 13:59:43] 2026-01-09 12:58:42,452 | INFO     | sum of deviations: -27663662412.5
[2026-01-09 13:59:43] 2026-01-09 12:58:42,452 | INFO     | mean x: 1767959501.5
[2026-01-09 13:59:43] 2026-01-09 12:58:42,453 | INFO     | mean y: 2537419.734848485
[2026-01-09 13:59:43] 2026-01-09 12:58:42,453 | INFO     | intersect: 68583992746.521454
[2026-01-09 13:59:43] 2026-01-09 12:58:42,453 | INFO     | chi2: 0.9161925497124312
[2026-01-09 13:59:43] 2026-01-09 12:58:42,453 | INFO     | current chi2=0.9161925497124312 (change=1.814180249465717 %)
[2026-01-09 13:59:43] 2026-01-09 12:58:42,453 | INFO     | left removable region: 20
[2026-01-09 13:59:43] 2026-01-09 12:58:42,453 | INFO     | sum of square deviations: 424045160.0
[2026-01-09 13:59:43] 2026-01-09 12:58:42,454 | INFO     | sum of deviations: -9215456172.000002
[2026-01-09 13:59:43] 2026-01-09 12:58:42,454 | INFO     | mean x: 1767959471.0
[2026-01-09 13:59:43] 2026-01-09 12:58:42,454 | INFO     | mean y: 2539249.4324324327
[2026-01-09 13:59:43] 2026-01-09 12:58:42,455 | INFO     | intersect: 38424279563.30091
[2026-01-09 13:59:43] 2026-01-09 12:58:42,455 | INFO     | chi2: 0.09308112957139597
[2026-01-09 13:59:43] 2026-01-09 12:58:42,455 | INFO     | current memory leak: -21.73 B/s (using 111 data points, chi2=0.09)
[2026-01-09 13:59:43] 2026-01-09 12:58:42,455 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-01-09 13:59:43] 2026-01-09 12:58:42,456 | INFO     | ..............................
[2026-01-09 13:59:43] 2026-01-09 12:58:42,456 | INFO     | . Timing measurements:
[2026-01-09 13:59:43] 2026-01-09 12:58:42,456 | INFO     | . get job = 0 s
[2026-01-09 13:59:43] 2026-01-09 12:58:42,456 | INFO     | . initial setup = 1 s
[2026-01-09 13:59:43] 2026-01-09 12:58:42,456 | INFO     | . payload setup = 7 s
[2026-01-09 13:59:43] 2026-01-09 12:58:42,456 | INFO     | . stage-in = 0 s
[2026-01-09 13:59:43] 2026-01-09 12:58:42,456 | INFO     | . payload execution = 8623 s
[2026-01-09 13:59:43] 2026-01-09 12:58:42,456 | INFO     | . stage-out = 0 s
[2026-01-09 13:59:43] 2026-01-09 12:58:42,457 | INFO     | . log creation = 0 s
[2026-01-09 13:59:43] 2026-01-09 12:58:42,457 | INFO     | ..............................
[2026-01-09 13:59:43] 2026-01-09 12:58:42,563 | INFO     | 
[2026-01-09 13:59:43] 2026-01-09 12:58:42,564 | INFO     | job summary report
[2026-01-09 13:59:43] 2026-01-09 12:58:42,564 | INFO     | --------------------------------------------------
[2026-01-09 13:59:43] 2026-01-09 12:58:42,564 | INFO     | PanDA job id: 6963153478
[2026-01-09 13:59:43] 2026-01-09 12:58:42,564 | INFO     | task id: 47898826
[2026-01-09 13:59:43] 2026-01-09 12:58:42,564 | INFO     | errors: (none)
[2026-01-09 13:59:43] 2026-01-09 12:58:42,564 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 13:59:43] 2026-01-09 12:58:42,564 | INFO     | pilot state: finished 
[2026-01-09 13:59:43] 2026-01-09 12:58:42,564 | INFO     | transexitcode: 0
[2026-01-09 13:59:43] 2026-01-09 12:58:42,565 | INFO     | exeerrorcode: 0
[2026-01-09 13:59:43] 2026-01-09 12:58:42,565 | INFO     | exeerrordiag: 
[2026-01-09 13:59:43] 2026-01-09 12:58:42,565 | INFO     | exitcode: 0
[2026-01-09 13:59:43] 2026-01-09 12:58:42,565 | INFO     | exitmsg: OK
[2026-01-09 13:59:43] 2026-01-09 12:58:42,565 | INFO     | cpuconsumptiontime: 65116 s
[2026-01-09 13:59:43] 2026-01-09 12:58:42,565 | INFO     | nevents: 400
[2026-01-09 13:59:43] 2026-01-09 12:58:42,565 | INFO     | neventsw: 0
[2026-01-09 13:59:43] 2026-01-09 12:58:42,565 | INFO     | pid: 19900
[2026-01-09 13:59:43] 2026-01-09 12:58:42,565 | INFO     | pgrp: 19900
[2026-01-09 13:59:43] 2026-01-09 12:58:42,565 | INFO     | corecount: 8
[2026-01-09 13:59:43] 2026-01-09 12:58:42,566 | INFO     | event service: False
[2026-01-09 13:59:43] 2026-01-09 12:58:42,566 | INFO     | sizes: {0: 2283801, 1: 2284000, 6: 2284262, 12: 2284290, 8634: 2312002, 8636: 2321186, 8643: 2321324}
[2026-01-09 13:59:43] 2026-01-09 12:58:42,566 | INFO     | --------------------------------------------------
[2026-01-09 13:59:43] 2026-01-09 12:58:42,566 | INFO     | 
[2026-01-09 13:59:43] 2026-01-09 12:58:42,566 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-01-09 13:59:43] 2026-01-09 12:58:42,590 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 13:59:43] 2026-01-09 12:58:42,590 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 13:59:43] 2026-01-09 12:58:42,590 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 13:59:43] 2026-01-09 12:58:42,590 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 13:59:43] 2026-01-09 12:58:42,590 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 13:59:43] 2026-01-09 12:58:42,591 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 13:59:43] 2026-01-09 12:58:42,591 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 13:59:43] 2026-01-09 12:58:42,591 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 13:59:43] 2026-01-09 12:58:42,591 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 13:59:43] 2026-01-09 12:58:42,591 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 13:59:43] 2026-01-09 12:58:42,591 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 13:59:43] 2026-01-09 12:58:42,591 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 13:59:43] 2026-01-09 12:58:42,591 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 13:59:43] 2026-01-09 12:58:42,591 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 13:59:43] 2026-01-09 12:58:42,592 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 13:59:43] 2026-01-09 12:58:42,592 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 13:59:43] 2026-01-09 12:58:42,592 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 13:59:43] 2026-01-09 12:58:42,592 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 13:59:43] 2026-01-09 12:58:42,592 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 13:59:43] 2026-01-09 12:58:42,592 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 13:59:43] 2026-01-09 12:58:42,592 | INFO     | job 6963153478 has completed (purged errors)
[2026-01-09 13:59:43] 2026-01-09 12:58:42,592 | INFO     | overall cleanup function is called
[2026-01-09 13:59:43] 2026-01-09 12:58:43,236 | INFO     | PID=13472 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 13:59:43] 2026-01-09 12:58:43,600 | INFO     | --- collectZombieJob: --- 10, [19900]
[2026-01-09 13:59:43] 2026-01-09 12:58:43,600 | INFO     | zombie collector waiting for pid 19900
[2026-01-09 13:59:43] 2026-01-09 12:58:43,601 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 13:59:43] 2026-01-09 12:58:43,601 | INFO     | collected zombie processes
[2026-01-09 13:59:43] 2026-01-09 12:58:43,601 | INFO     | will attempt to kill all subprocesses of pid=19900
[2026-01-09 13:59:43] 2026-01-09 12:58:43,659 | INFO     | process IDs to be killed: [19900] (in reverse order)
[2026-01-09 13:59:43] 2026-01-09 12:58:43,703 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 13:59:43] 2026-01-09 12:58:43,704 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 13:59:43] 2026-01-09 12:58:43,706 | INFO     | did not find any defunct processes belonging to 19900
[2026-01-09 13:59:43] 2026-01-09 12:58:43,707 | INFO     | did not find any defunct processes belonging to 19900
[2026-01-09 13:59:43] 2026-01-09 12:58:43,707 | INFO     | ready for new job
[2026-01-09 13:59:43] 2026-01-09 12:58:43,707 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 13:59:43] 2026-01-09 12:58:43,709 | INFO     | ***************************************
[2026-01-09 13:59:43] 2026-01-09 12:58:43,709 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 13:59:43] 2026-01-09 12:58:43,709 | INFO     | ***************************************
[2026-01-09 13:59:43] 2026-01-09 12:58:43,709 | INFO     | 
[2026-01-09 13:59:43] 2026-01-09 12:58:43,710 | INFO     | pilot is running in a VM
[2026-01-09 13:59:43] 2026-01-09 12:58:43,710 | INFO     | architecture information:
[2026-01-09 13:59:43] 2026-01-09 12:58:43,710 | INFO     | executing command: cat /etc/os-release
[2026-01-09 13:59:43] 2026-01-09 12:58:43,732 | INFO     | cat /etc/os-release:
[2026-01-09 13:59:43] NAME="CentOS Linux"
[2026-01-09 13:59:43] VERSION="7 (Core)"
[2026-01-09 13:59:43] ID="centos"
[2026-01-09 13:59:43] ID_LIKE="rhel fedora"
[2026-01-09 13:59:43] VERSION_ID="7"
[2026-01-09 13:59:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 13:59:43] ANSI_COLOR="0;31"
[2026-01-09 13:59:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 13:59:43] HOME_URL="https://www.centos.org/"
[2026-01-09 13:59:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 13:59:43] 
[2026-01-09 13:59:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 13:59:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 13:59:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 13:59:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 13:59:43] 
[2026-01-09 13:59:43] 2026-01-09 12:58:43,733 | INFO     | ***************************************
[2026-01-09 13:59:43] 2026-01-09 12:58:44,236 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-01-09 13:59:43] 2026-01-09 12:58:44,258 | INFO     | sufficient remaining disk space (498293800960 B)
[2026-01-09 13:59:43] 2026-01-09 12:58:44,258 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 13:59:43] 2026-01-09 12:58:44,258 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 13:59:43] 2026-01-09 12:58:44,258 | INFO     | update_server=False
[2026-01-09 13:59:43] 2026-01-09 12:58:44,259 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 13:59:43] 2026-01-09 12:58:44,259 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 13:59:43] 2026-01-09 12:58:44,259 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:59:43] 2026-01-09 12:58:44,362 | INFO     | all data control threads have been joined
[2026-01-09 13:59:43] 2026-01-09 12:58:44,568 | INFO     | all job control threads have been joined
[2026-01-09 13:59:43] 2026-01-09 12:58:44,820 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:59:43] 2026-01-09 12:58:44,820 | INFO     | aborting loop
[2026-01-09 13:59:43] 2026-01-09 12:58:44,891 | INFO     | all payload control threads have been joined
[2026-01-09 13:59:43] 2026-01-09 12:58:45,264 | INFO     | [job] retrieve thread has finished
[2026-01-09 13:59:43] 2026-01-09 12:58:45,266 | INFO     | [job] queue monitor thread has finished
[2026-01-09 13:59:43] 2026-01-09 12:58:45,284 | INFO     | [payload] failed_post thread has finished
[2026-01-09 13:59:43] 2026-01-09 12:58:45,362 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 13:59:43] 2026-01-09 12:58:45,368 | INFO     | [data] control thread has finished
[2026-01-09 13:59:43] 2026-01-09 12:58:45,448 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 13:59:43] 2026-01-09 12:58:45,574 | INFO     | [job] control thread has finished
[2026-01-09 13:59:43] 2026-01-09 12:58:45,729 | INFO     | [job] validate thread has finished
[2026-01-09 13:59:43] 2026-01-09 12:58:45,826 | INFO     | [job] job monitor thread has finished
[2026-01-09 13:59:43] 2026-01-09 12:58:45,897 | INFO     | [payload] control thread has finished
[2026-01-09 13:59:43] 2026-01-09 12:58:46,265 | INFO     | [data] copytool_out thread has finished
[2026-01-09 13:59:43] 2026-01-09 12:58:46,331 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 13:59:43] 2026-01-09 12:58:46,367 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 13:59:43] 2026-01-09 12:58:46,527 | INFO     | [payload] validate_post thread has finished
[2026-01-09 13:59:43] 2026-01-09 12:58:46,606 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 13:59:43] 2026-01-09 12:58:46,728 | INFO     | [data] copytool_in thread has finished
[2026-01-09 13:59:43] 2026-01-09 12:58:50,612 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 13:59:43] 2026-01-09 12:59:15,325 | INFO     | PID=13472 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 13:59:43] 2026-01-09 12:59:15,326 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 13:59:43] 2026-01-09 12:59:15,326 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 13:59:43] 2026-01-09 12:59:15,326 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 13:59:43] 2026-01-09 12:59:36,934 | INFO     | [monitor] cgroup control has ended
[2026-01-09 13:59:43] 2026-01-09 12:59:38,565 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140222634841920)>', '<ExcThread(monitor, started 140222343927552)>']
[2026-01-09 13:59:43] 2026-01-09 12:59:39,446 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 13:59:43] 2026-01-09 12:59:39,446 | INFO     | [monitor] control thread has ended
[2026-01-09 13:59:43] 2026-01-09 12:59:43,573 | INFO     | all workflow threads have been joined
[2026-01-09 13:59:43] 2026-01-09 12:59:43,574 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 13:59:43] 2026-01-09 12:59:43,574 | INFO     | traces error code: 0
[2026-01-09 13:59:43] 2026-01-09 12:59:43,575 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 13:59:43] 2026-01-09 12:59:43,719 [wrapper] ==== pilot stdout END ====
[2026-01-09 13:59:43] 2026-01-09 12:59:43,726 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 13:59:43] 2026-01-09 12:59:43,730 [wrapper] pilotpid: 13472
[2026-01-09 13:59:43] 2026-01-09 12:59:43,736 [wrapper] Pilot exit status: 0
[2026-01-09 13:59:43] 2026-01-09 12:59:43,759 [wrapper] pandaids: 6963153478
[2026-01-09 13:59:43] 2026-01-09 12:59:43,800 [wrapper] cleanup supervisor_pilot  4252 13473
[2026-01-09 13:59:43] 2026-01-09 12:59:43,806 [wrapper] Test setup, not cleaning
[2026-01-09 13:59:43] 2026-01-09 12:59:43,810 [wrapper] apfmon messages muted
[2026-01-09 13:59:43] 2026-01-09 12:59:43,814 [wrapper] ==== wrapper stdout END ====
[2026-01-09 13:59:43] 2026-01-09 12:59:43,817 [wrapper] ==== wrapper stderr END ====
[2026-01-09 13:59:43]  *** Error codes and diagnostics ***
[2026-01-09 13:59:43]     "exeErrorCode": 0,
[2026-01-09 13:59:43]     "exeErrorDiag": "",
[2026-01-09 13:59:43]     "pilotErrorCode": 0,
[2026-01-09 13:59:43]     "pilotErrorDiag": "",
[2026-01-09 13:59:43]  *** Listing of results directory ***
[2026-01-09 13:59:43] total 433188
[2026-01-09 13:59:43] -rw-r--r--. 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 13:59:43] -rwx------. 1 boinc boinc     36322 Jan  8 20:06 runpilot2-wrapper.sh
[2026-01-09 13:59:43] -rw-r--r--. 1 boinc boinc      5112 Jan  8 20:06 queuedata.json
[2026-01-09 13:59:43] -rw-r--r--. 1 boinc boinc       100 Jan  9 11:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 13:59:43] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 11:34 run_atlas
[2026-01-09 13:59:43] -rw-r--r--. 1 boinc boinc       105 Jan  9 11:34 job.xml
[2026-01-09 13:59:43] -rw-r--r--. 1 boinc boinc      6391 Jan  9 11:34 init_data.xml
[2026-01-09 13:59:43] -rw-r--r--. 2 boinc boinc 224066117 Jan  9 11:34 EVNT.47898824._001167.pool.root.1
[2026-01-09 13:59:43] -rw-r--r--. 2 boinc boinc     15847 Jan  9 11:34 start_atlas.sh
[2026-01-09 13:59:43] drwxrwx--x. 2 boinc boinc        68 Jan  9 11:34 shared
[2026-01-09 13:59:43] -rw-r--r--. 2 boinc boinc    592384 Jan  9 11:34 input.tar.gz
[2026-01-09 13:59:43] -rw-r--r--. 1 boinc boinc         0 Jan  9 11:34 boinc_lockfile
[2026-01-09 13:59:43] -rw-r--r--. 1 boinc boinc      2520 Jan  9 11:34 pandaJob.out
[2026-01-09 13:59:43] -rw-------. 1 boinc boinc    989369 Jan  9 11:34 agis_schedconf.cvmfs.json
[2026-01-09 13:59:43] -rw-------. 1 boinc boinc   1516240 Jan  9 11:34 agis_ddmendpoints.agis.ALL.json
[2026-01-09 13:59:43] drwx------. 5 boinc boinc      4096 Jan  9 11:34 pilot3
[2026-01-09 13:59:43] -rw-------. 1 boinc boinc 212559138 Jan  9 13:57 HITS.47898826._030151.pool.root.1
[2026-01-09 13:59:43] -rw-r--r--. 1 boinc boinc       529 Jan  9 13:58 boinc_task_state.xml
[2026-01-09 13:59:43] -rw-------. 1 boinc boinc      1009 Jan  9 13:58 memory_monitor_summary.json
[2026-01-09 13:59:43] -rw-------. 1 boinc boinc    366178 Jan  9 13:58 log.47898826._030151.job.log.tgz.1
[2026-01-09 13:59:43] -rw-------. 1 boinc boinc      7771 Jan  9 13:58 heartbeat.json
[2026-01-09 13:59:43] -rw-------. 1 boinc boinc        95 Jan  9 13:59 pilot_heartbeat.json
[2026-01-09 13:59:43] -rw-r--r--. 1 boinc boinc      8192 Jan  9 13:59 boinc_mmap_file
[2026-01-09 13:59:43] -rw-r--r--. 1 boinc boinc        27 Jan  9 13:59 wrapper_checkpoint.txt
[2026-01-09 13:59:43] -rw-------. 1 boinc boinc      4810 Jan  9 13:59 pilotlog.txt
[2026-01-09 13:59:43] -rw-------. 1 boinc boinc   1165088 Jan  9 13:59 log.47898826._030151.job.log.1
[2026-01-09 13:59:43] -rw-------. 1 boinc boinc       357 Jan  9 13:59 output.list
[2026-01-09 13:59:43] -rw-r--r--. 1 boinc boinc       620 Jan  9 13:59 runtime_log
[2026-01-09 13:59:43] -rw-------. 1 boinc boinc   1546240 Jan  9 13:59 result.tar.gz
[2026-01-09 13:59:43] -rw-r--r--. 1 boinc boinc      8832 Jan  9 13:59 runtime_log.err
[2026-01-09 13:59:43] -rw-------. 1 boinc boinc       652 Jan  9 13:59 eScMDmvVAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmp8kKDmYgczBo.diag
[2026-01-09 13:59:43] -rw-r--r--. 1 boinc boinc     20837 Jan  9 13:59 stderr.txt
[2026-01-09 13:59:43] HITS file was successfully produced:
[2026-01-09 13:59:43] -rw-------. 1 boinc boinc 212559138 Jan  9 13:57 shared/HITS.pool.root.1
[2026-01-09 13:59:43]  *** Contents of shared directory: ***
[2026-01-09 13:59:43] total 428504
[2026-01-09 13:59:43] -rw-r--r--. 2 boinc boinc 224066117 Jan  9 11:34 ATLAS.root_0
[2026-01-09 13:59:43] -rw-r--r--. 2 boinc boinc     15847 Jan  9 11:34 start_atlas.sh
[2026-01-09 13:59:43] -rw-r--r--. 2 boinc boinc    592384 Jan  9 11:34 input.tar.gz
[2026-01-09 13:59:43] -rw-------. 1 boinc boinc 212559138 Jan  9 13:57 HITS.pool.root.1
[2026-01-09 13:59:43] -rw-------. 1 boinc boinc   1546240 Jan  9 13:59 result.tar.gz
13:59:45 (9756): run_atlas exited; CPU time 65168.561471
13:59:45 (9756): called boinc_finish(0)

</stderr_txt>
]]>

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