Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:51:30 (2946781): wrapper (7.7.26015): starting
19:51:30 (2946781): wrapper: running run_atlas (--nthreads 3)
[2026-01-09 19:51:30] Arguments: --nthreads 3
[2026-01-09 19:51:30] Threads: 3
[2026-01-09 19:51:30] Checking for CVMFS
[2026-01-09 19:51:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:51:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:51:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:51:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:51:30] 2.9.2.0 1971155 2340 38028 154953 0 56 16529812 36864001 0 130560 0 1466165 99.987 90857 3858 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 19:51:30] CVMFS is ok
[2026-01-09 19:51:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 19:51:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 19:51:30] Further information can be found at the LHC@home message board.
[2026-01-09 19:51:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:51:30] Checking for apptainer binary...
[2026-01-09 19:51:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:51:30] Running /usr/bin/apptainer --version
[2026-01-09 19:51:30] apptainer version 1.4.1-1.1
[2026-01-09 19:51:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:51:30] thA363a
[2026-01-09 19:51:30] apptainer works
[2026-01-09 19:51:30] Set ATHENA_PROC_NUMBER=3
[2026-01-09 19:51:30] Set ATHENA_CORE_NUMBER=3
[2026-01-09 19:51:30] Starting ATLAS job with PandaID=6963155262
[2026-01-09 19:51:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:48:53]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:48:53] 2026-01-09 20:47:51,068 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:48:53] 2026-01-09 20:47:51,068 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:48:53] 2026-01-09 20:47:51,068 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:48:53] 2026-01-09 20:47:51,068 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:48:53] 2026-01-09 20:47:51,069 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:48:53] 2026-01-09 20:47:51,069 | INFO     | sum of square deviations: 459366752.5
[2026-01-09 21:48:53] 2026-01-09 20:47:51,070 | INFO     | sum of deviations: 3814329237.4999995
[2026-01-09 21:48:53] 2026-01-09 20:47:51,070 | INFO     | mean x: 1767988162.5
[2026-01-09 21:48:53] 2026-01-09 20:47:51,070 | INFO     | mean y: 2332640.3245614036
[2026-01-09 21:48:53] 2026-01-09 20:47:51,070 | INFO     | intersect: -14678070116.463219
[2026-01-09 21:48:53] 2026-01-09 20:47:51,070 | INFO     | chi2: 1.5677457133561532
[2026-01-09 21:48:53] 2026-01-09 20:47:51,070 | INFO     | sum of square deviations: 401533110.0
[2026-01-09 21:48:53] 2026-01-09 20:47:51,070 | INFO     | sum of deviations: 3755762558.000001
[2026-01-09 21:48:53] 2026-01-09 20:47:51,070 | INFO     | mean x: 1767988010.0
[2026-01-09 21:48:53] 2026-01-09 20:47:51,070 | INFO     | mean y: 2332486.018348624
[2026-01-09 21:48:53] 2026-01-09 20:47:51,070 | INFO     | intersect: -16534642935.388197
[2026-01-09 21:48:53] 2026-01-09 20:47:51,070 | INFO     | chi2: 1.5700992121698367
[2026-01-09 21:48:53] 2026-01-09 20:47:51,070 | INFO     | current chi2=1.5700992121698367 (change=-0.15011993294787992 %)
[2026-01-09 21:48:53] 2026-01-09 20:47:51,070 | INFO     | right removable region: 108
[2026-01-09 21:48:53] 2026-01-09 20:47:51,070 | INFO     | sum of square deviations: 401533110.0
[2026-01-09 21:48:53] 2026-01-09 20:47:51,071 | INFO     | sum of deviations: -8780330667.000002
[2026-01-09 21:48:53] 2026-01-09 20:47:51,071 | INFO     | mean x: 1767988315.0
[2026-01-09 21:48:53] 2026-01-09 20:47:51,071 | INFO     | mean y: 2364828.211009174
[2026-01-09 21:48:53] 2026-01-09 20:47:51,071 | INFO     | intersect: 38662992394.12247
[2026-01-09 21:48:53] 2026-01-09 20:47:51,071 | INFO     | chi2: 0.1580416113693646
[2026-01-09 21:48:53] 2026-01-09 20:47:51,071 | INFO     | current chi2=0.1580416113693646 (change=89.91918076873343 %)
[2026-01-09 21:48:53] 2026-01-09 20:47:51,071 | INFO     | sum of square deviations: 348769330.0
[2026-01-09 21:48:53] 2026-01-09 20:47:51,071 | INFO     | sum of deviations: -2926366206.4999995
[2026-01-09 21:48:53] 2026-01-09 20:47:51,071 | INFO     | mean x: 1767988467.5
[2026-01-09 21:48:53] 2026-01-09 20:47:51,071 | INFO     | mean y: 2347885.221153846
[2026-01-09 21:48:53] 2026-01-09 20:47:51,071 | INFO     | intersect: 14836742024.102926
[2026-01-09 21:48:53] 2026-01-09 20:47:51,071 | INFO     | chi2: 0.07887531091430845
[2026-01-09 21:48:53] 2026-01-09 20:47:51,071 | INFO     | current chi2=0.07887531091430845 (change=50.09206105222111 %)
[2026-01-09 21:48:53] 2026-01-09 20:47:51,071 | INFO     | sum of square deviations: 300842850.0
[2026-01-09 21:48:53] 2026-01-09 20:47:51,071 | INFO     | sum of deviations: 591707442.0000001
[2026-01-09 21:48:53] 2026-01-09 20:47:51,071 | INFO     | mean x: 1767988620.0
[2026-01-09 21:48:53] 2026-01-09 20:47:51,071 | INFO     | mean y: 2336927.202020202
[2026-01-09 21:48:53] 2026-01-09 20:47:51,072 | INFO     | intersect: -3475000240.110782
[2026-01-09 21:48:53] 2026-01-09 20:47:51,072 | INFO     | chi2: 0.0012956287817933153
[2026-01-09 21:48:53] 2026-01-09 20:47:51,072 | INFO     | current chi2=0.0012956287817933153 (change=98.35737093549982 %)
[2026-01-09 21:48:53] 2026-01-09 20:47:51,072 | INFO     | sum of square deviations: 257521107.5
[2026-01-09 21:48:53] 2026-01-09 20:47:51,072 | INFO     | sum of deviations: 344165904.0000001
[2026-01-09 21:48:53] 2026-01-09 20:47:51,072 | INFO     | mean x: 1767988772.5
[2026-01-09 21:48:53] 2026-01-09 20:47:51,072 | INFO     | mean y: 2337798.404255319
[2026-01-09 21:48:53] 2026-01-09 20:47:51,072 | INFO     | intersect: -2360503290.842431
[2026-01-09 21:48:53] 2026-01-09 20:47:51,072 | INFO     | chi2: 0.0011642911410151362
[2026-01-09 21:48:53] 2026-01-09 20:47:51,072 | INFO     | current chi2=0.0011642911410151362 (change=10.136980794482739 %)
[2026-01-09 21:48:53] 2026-01-09 20:47:51,072 | INFO     | left removable region: 40
[2026-01-09 21:48:53] 2026-01-09 20:47:51,072 | INFO     | sum of square deviations: 97479037.0
[2026-01-09 21:48:53] 2026-01-09 20:47:51,072 | INFO     | sum of deviations: -250059435.00000003
[2026-01-09 21:48:53] 2026-01-09 20:47:51,072 | INFO     | mean x: 1767989199.5
[2026-01-09 21:48:53] 2026-01-09 20:47:51,072 | INFO     | mean y: 2341008.294117647
[2026-01-09 21:48:53] 2026-01-09 20:47:51,072 | INFO     | intersect: 4537699521.459081
[2026-01-09 21:48:53] 2026-01-09 20:47:51,072 | INFO     | chi2: 0.00027681601914715396
[2026-01-09 21:48:53] 2026-01-09 20:47:51,072 | INFO     | current memory leak: -2.57 B/s (using 68 data points, chi2=0.00)
[2026-01-09 21:48:53] 2026-01-09 20:47:51,072 | INFO     | could have reported an average CPU frequency of 4090 MHz (7 samples)
[2026-01-09 21:48:53] 2026-01-09 20:47:51,073 | INFO     | ..............................
[2026-01-09 21:48:53] 2026-01-09 20:47:51,073 | INFO     | . Timing measurements:
[2026-01-09 21:48:53] 2026-01-09 20:47:51,073 | INFO     | . get job = 0 s
[2026-01-09 21:48:53] 2026-01-09 20:47:51,073 | INFO     | . initial setup = 1 s
[2026-01-09 21:48:53] 2026-01-09 20:47:51,073 | INFO     | . payload setup = 3 s
[2026-01-09 21:48:53] 2026-01-09 20:47:51,073 | INFO     | . stage-in = 0 s
[2026-01-09 21:48:53] 2026-01-09 20:47:51,073 | INFO     | . payload execution = 6945 s
[2026-01-09 21:48:53] 2026-01-09 20:47:51,073 | INFO     | . stage-out = 0 s
[2026-01-09 21:48:53] 2026-01-09 20:47:51,073 | INFO     | . log creation = 0 s
[2026-01-09 21:48:53] 2026-01-09 20:47:51,073 | INFO     | ..............................
[2026-01-09 21:48:53] 2026-01-09 20:47:51,103 | INFO     | 
[2026-01-09 21:48:53] 2026-01-09 20:47:51,103 | INFO     | job summary report
[2026-01-09 21:48:53] 2026-01-09 20:47:51,103 | INFO     | --------------------------------------------------
[2026-01-09 21:48:53] 2026-01-09 20:47:51,103 | INFO     | PanDA job id: 6963155262
[2026-01-09 21:48:53] 2026-01-09 20:47:51,103 | INFO     | task id: 47898826
[2026-01-09 21:48:53] 2026-01-09 20:47:51,103 | INFO     | errors: (none)
[2026-01-09 21:48:53] 2026-01-09 20:47:51,103 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:48:53] 2026-01-09 20:47:51,103 | INFO     | pilot state: finished 
[2026-01-09 21:48:53] 2026-01-09 20:47:51,103 | INFO     | transexitcode: 0
[2026-01-09 21:48:53] 2026-01-09 20:47:51,103 | INFO     | exeerrorcode: 0
[2026-01-09 21:48:53] 2026-01-09 20:47:51,103 | INFO     | exeerrordiag: 
[2026-01-09 21:48:53] 2026-01-09 20:47:51,103 | INFO     | exitcode: 0
[2026-01-09 21:48:53] 2026-01-09 20:47:51,103 | INFO     | exitmsg: OK
[2026-01-09 21:48:53] 2026-01-09 20:47:51,103 | INFO     | cpuconsumptiontime: 20251 s
[2026-01-09 21:48:53] 2026-01-09 20:47:51,103 | INFO     | nevents: 400
[2026-01-09 21:48:53] 2026-01-09 20:47:51,103 | INFO     | neventsw: 0
[2026-01-09 21:48:53] 2026-01-09 20:47:51,103 | INFO     | pid: 2956948
[2026-01-09 21:48:53] 2026-01-09 20:47:51,103 | INFO     | pgrp: 2956948
[2026-01-09 21:48:53] 2026-01-09 20:47:51,103 | INFO     | corecount: 3
[2026-01-09 21:48:53] 2026-01-09 20:47:51,103 | INFO     | event service: False
[2026-01-09 21:48:53] 2026-01-09 20:47:51,103 | INFO     | sizes: {0: 2283974, 2: 2284236, 10: 2284264, 6951: 2311644, 6952: 2320648, 6954: 2320704, 6961: 2321026}
[2026-01-09 21:48:53] 2026-01-09 20:47:51,103 | INFO     | --------------------------------------------------
[2026-01-09 21:48:53] 2026-01-09 20:47:51,103 | INFO     | 
[2026-01-09 21:48:53] 2026-01-09 20:47:51,103 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-09 21:48:53] 2026-01-09 20:47:51,117 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:48:53] 2026-01-09 20:47:51,117 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:48:53] 2026-01-09 20:47:51,117 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:48:53] 2026-01-09 20:47:51,117 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:48:53] 2026-01-09 20:47:51,117 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:48:53] 2026-01-09 20:47:51,117 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:48:53] 2026-01-09 20:47:51,117 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:48:53] 2026-01-09 20:47:51,117 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:48:53] 2026-01-09 20:47:51,117 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:48:53] 2026-01-09 20:47:51,117 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:48:53] 2026-01-09 20:47:51,117 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:48:53] 2026-01-09 20:47:51,117 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:48:53] 2026-01-09 20:47:51,117 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:48:53] 2026-01-09 20:47:51,117 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:48:53] 2026-01-09 20:47:51,118 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:48:53] 2026-01-09 20:47:51,118 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:48:53] 2026-01-09 20:47:51,118 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:48:53] 2026-01-09 20:47:51,118 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:48:53] 2026-01-09 20:47:51,118 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:48:53] 2026-01-09 20:47:51,118 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:48:53] 2026-01-09 20:47:51,118 | INFO     | job 6963155262 has completed (purged errors)
[2026-01-09 21:48:53] 2026-01-09 20:47:51,118 | INFO     | overall cleanup function is called
[2026-01-09 21:48:53] 2026-01-09 20:47:52,124 | INFO     | --- collectZombieJob: --- 10, [2956948]
[2026-01-09 21:48:53] 2026-01-09 20:47:52,124 | INFO     | zombie collector waiting for pid 2956948
[2026-01-09 21:48:53] 2026-01-09 20:47:52,124 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:48:53] 2026-01-09 20:47:52,124 | INFO     | collected zombie processes
[2026-01-09 21:48:53] 2026-01-09 20:47:52,124 | INFO     | will attempt to kill all subprocesses of pid=2956948
[2026-01-09 21:48:53] 2026-01-09 20:47:52,191 | INFO     | process IDs to be killed: [2956948] (in reverse order)
[2026-01-09 21:48:53] 2026-01-09 20:47:52,224 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:48:53] 2026-01-09 20:47:52,224 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:48:53] 2026-01-09 20:47:52,226 | INFO     | did not find any defunct processes belonging to 2956948
[2026-01-09 21:48:53] 2026-01-09 20:47:52,228 | INFO     | did not find any defunct processes belonging to 2956948
[2026-01-09 21:48:53] 2026-01-09 20:47:52,228 | INFO     | ready for new job
[2026-01-09 21:48:53] 2026-01-09 20:47:52,228 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:48:53] 2026-01-09 20:47:52,229 | INFO     | ***************************************
[2026-01-09 21:48:53] 2026-01-09 20:47:52,229 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:48:53] 2026-01-09 20:47:52,229 | INFO     | ***************************************
[2026-01-09 21:48:53] 2026-01-09 20:47:52,229 | INFO     | 
[2026-01-09 21:48:53] 2026-01-09 20:47:52,229 | INFO     | architecture information:
[2026-01-09 21:48:53] 2026-01-09 20:47:52,230 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:48:53] 2026-01-09 20:47:52,239 | INFO     | cat /etc/os-release:
[2026-01-09 21:48:53] NAME="CentOS Linux"
[2026-01-09 21:48:53] VERSION="7 (Core)"
[2026-01-09 21:48:53] ID="centos"
[2026-01-09 21:48:53] ID_LIKE="rhel fedora"
[2026-01-09 21:48:53] VERSION_ID="7"
[2026-01-09 21:48:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:48:53] ANSI_COLOR="0;31"
[2026-01-09 21:48:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:48:53] HOME_URL="https://www.centos.org/"
[2026-01-09 21:48:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:48:53] 
[2026-01-09 21:48:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:48:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:48:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:48:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:48:53] 
[2026-01-09 21:48:53] 2026-01-09 20:47:52,239 | INFO     | ***************************************
[2026-01-09 21:48:53] 2026-01-09 20:47:52,742 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-09 21:48:53] 2026-01-09 20:47:52,752 | INFO     | sufficient remaining disk space (242096275456 B)
[2026-01-09 21:48:53] 2026-01-09 20:47:52,753 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:48:53] 2026-01-09 20:47:52,753 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:48:53] 2026-01-09 20:47:52,753 | INFO     | update_server=False
[2026-01-09 21:48:53] 2026-01-09 20:47:52,753 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:48:53] 2026-01-09 20:47:52,753 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:48:53] 2026-01-09 20:47:52,753 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:48:53] 2026-01-09 20:47:52,753 | INFO     | aborting loop
[2026-01-09 21:48:53] 2026-01-09 20:47:53,001 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:48:53] 2026-01-09 20:47:53,360 | INFO     | all data control threads have been joined
[2026-01-09 21:48:53] 2026-01-09 20:47:53,738 | INFO     | all payload control threads have been joined
[2026-01-09 21:48:53] 2026-01-09 20:47:53,757 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:48:53] 2026-01-09 20:47:53,758 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:48:53] 2026-01-09 20:47:53,758 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:48:53] 2026-01-09 20:47:53,839 | INFO     | all job control threads have been joined
[2026-01-09 21:48:53] 2026-01-09 20:47:54,317 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:48:53] 2026-01-09 20:47:54,365 | INFO     | [data] control thread has finished
[2026-01-09 21:48:53] 2026-01-09 20:47:54,559 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:48:53] 2026-01-09 20:47:54,601 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:48:53] 2026-01-09 20:47:54,611 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:48:53] 2026-01-09 20:47:54,743 | INFO     | [payload] control thread has finished
[2026-01-09 21:48:53] 2026-01-09 20:47:54,845 | INFO     | [job] control thread has finished
[2026-01-09 21:48:53] 2026-01-09 20:47:54,983 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:48:53] 2026-01-09 20:47:55,003 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:48:53] 2026-01-09 20:47:55,027 | INFO     | [job] validate thread has finished
[2026-01-09 21:48:53] 2026-01-09 20:47:55,034 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:48:53] 2026-01-09 20:47:55,136 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:48:53] 2026-01-09 20:47:55,197 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:48:53] 2026-01-09 20:47:58,989 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:48:53] 2026-01-09 20:48:22,398 | INFO     | PID=2950504 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:48:53] 2026-01-09 20:48:22,398 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:48:53] 2026-01-09 20:48:22,398 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:48:53] 2026-01-09 20:48:22,398 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:48:53] 2026-01-09 20:48:46,885 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:48:53] 2026-01-09 20:48:48,516 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139894082197312)>', '<ExcThread(monitor, started 139893460170496)>']
[2026-01-09 21:48:53] 2026-01-09 20:48:48,523 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:48:53] 2026-01-09 20:48:48,523 | INFO     | [monitor] control thread has ended
[2026-01-09 21:48:53] 2026-01-09 20:48:53,542 | INFO     | all workflow threads have been joined
[2026-01-09 21:48:53] 2026-01-09 20:48:53,542 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:48:53] 2026-01-09 20:48:53,542 | INFO     | traces error code: 0
[2026-01-09 21:48:53] 2026-01-09 20:48:53,542 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:48:53] 2026-01-09 20:48:53,593 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:48:53] 2026-01-09 20:48:53,595 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:48:53] 2026-01-09 20:48:53,597 [wrapper] pilotpid: 2950504
[2026-01-09 21:48:53] 2026-01-09 20:48:53,599 [wrapper] Pilot exit status: 0
[2026-01-09 21:48:53] 2026-01-09 20:48:53,607 [wrapper] pandaids: 6963155262
[2026-01-09 21:48:53] 2026-01-09 20:48:53,629 [wrapper] cleanup supervisor_pilot 2975018 2950505
[2026-01-09 21:48:53] 2026-01-09 20:48:53,631 [wrapper] Test setup, not cleaning
[2026-01-09 21:48:53] 2026-01-09 20:48:53,634 [wrapper] apfmon messages muted
[2026-01-09 21:48:53] 2026-01-09 20:48:53,636 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:48:53] 2026-01-09 20:48:53,638 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:48:53]  *** Error codes and diagnostics ***
[2026-01-09 21:48:53]     "exeErrorCode": 0,
[2026-01-09 21:48:53]     "exeErrorDiag": "",
[2026-01-09 21:48:53]     "pilotErrorCode": 0,
[2026-01-09 21:48:53]     "pilotErrorDiag": "",
[2026-01-09 21:48:53]  *** Listing of results directory ***
[2026-01-09 21:48:53] total 440100
[2026-01-09 21:48:53] -rw-r--r-- 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 21:48:53] -rwx------ 1 boinc boinc     36322 Jan  8 20:09 runpilot2-wrapper.sh
[2026-01-09 21:48:53] -rw-r--r-- 1 boinc boinc      5112 Jan  8 20:11 queuedata.json
[2026-01-09 21:48:53] -rw-r--r-- 1 boinc boinc       100 Jan  9 19:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:48:53] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 19:51 run_atlas
[2026-01-09 21:48:53] -rw-r--r-- 1 boinc boinc       105 Jan  9 19:51 job.xml
[2026-01-09 21:48:53] -rw-r--r-- 2 boinc boinc 224015239 Jan  9 19:51 EVNT.47898824._001181.pool.root.1
[2026-01-09 21:48:53] drwxrwx--x 2 boinc boinc      4096 Jan  9 19:51 shared
[2026-01-09 21:48:53] -rw-r--r-- 2 boinc boinc    592399 Jan  9 19:51 input.tar.gz
[2026-01-09 21:48:53] -rw-r--r-- 2 boinc boinc     15847 Jan  9 19:51 start_atlas.sh
[2026-01-09 21:48:53] -rw-r--r-- 1 boinc boinc         0 Jan  9 19:51 boinc_setup_complete
[2026-01-09 21:48:53] -rw-r--r-- 1 boinc boinc      6438 Jan  9 19:51 init_data.xml
[2026-01-09 21:48:53] -rw-r--r-- 1 boinc boinc         0 Jan  9 19:51 boinc_lockfile
[2026-01-09 21:48:53] -rw-r--r-- 1 boinc boinc      2520 Jan  9 19:51 pandaJob.out
[2026-01-09 21:48:53] -rw------- 1 boinc boinc    989372 Jan  9 19:51 agis_schedconf.cvmfs.json
[2026-01-09 21:48:53] -rw------- 1 boinc boinc   1516240 Jan  9 19:51 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:48:53] drwx------ 5 boinc boinc      4096 Jan  9 19:51 pilot3
[2026-01-09 21:48:53] -rw------- 1 boinc boinc 220148012 Jan  9 21:47 HITS.47898826._030512.pool.root.1
[2026-01-09 21:48:53] -rw-r--r-- 1 boinc boinc       529 Jan  9 21:47 boinc_task_state.xml
[2026-01-09 21:48:53] -rw------- 1 boinc boinc      1021 Jan  9 21:47 memory_monitor_summary.json
[2026-01-09 21:48:53] -rw------- 1 boinc boinc    285253 Jan  9 21:47 log.47898826._030512.job.log.tgz.1
[2026-01-09 21:48:53] -rw------- 1 boinc boinc      7759 Jan  9 21:47 heartbeat.json
[2026-01-09 21:48:53] -rw------- 1 boinc boinc        95 Jan  9 21:48 pilot_heartbeat.json
[2026-01-09 21:48:53] -rw-r--r-- 1 boinc boinc      8192 Jan  9 21:48 boinc_mmap_file
[2026-01-09 21:48:53] -rw-r--r-- 1 boinc boinc        27 Jan  9 21:48 wrapper_checkpoint.txt
[2026-01-09 21:48:53] -rw------- 1 boinc boinc      4752 Jan  9 21:48 pilotlog.txt
[2026-01-09 21:48:53] -rw------- 1 boinc boinc   1003550 Jan  9 21:48 log.47898826._030512.job.log.1
[2026-01-09 21:48:53] -rw------- 1 boinc boinc       357 Jan  9 21:48 output.list
[2026-01-09 21:48:53] -rw-r--r-- 1 boinc boinc       620 Jan  9 21:48 runtime_log
[2026-01-09 21:48:53] -rw------- 1 boinc boinc   1310720 Jan  9 21:48 result.tar.gz
[2026-01-09 21:48:53] -rw-r--r-- 1 boinc boinc      8902 Jan  9 21:48 runtime_log.err
[2026-01-09 21:48:53] -rw------- 1 boinc boinc       660 Jan  9 21:48 N4RNDmMZAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPIlKDmhCDkBo.diag
[2026-01-09 21:48:53] -rw-r--r-- 1 boinc boinc     20905 Jan  9 21:48 stderr.txt
[2026-01-09 21:48:53] HITS file was successfully produced:
[2026-01-09 21:48:53] -rw------- 1 boinc boinc 220148012 Jan  9 21:47 shared/HITS.pool.root.1
[2026-01-09 21:48:53]  *** Contents of shared directory: ***
[2026-01-09 21:48:53] total 435644
[2026-01-09 21:48:53] -rw-r--r-- 2 boinc boinc 224015239 Jan  9 19:51 ATLAS.root_0
[2026-01-09 21:48:53] -rw-r--r-- 2 boinc boinc    592399 Jan  9 19:51 input.tar.gz
[2026-01-09 21:48:53] -rw-r--r-- 2 boinc boinc     15847 Jan  9 19:51 start_atlas.sh
[2026-01-09 21:48:53] -rw------- 1 boinc boinc 220148012 Jan  9 21:47 HITS.pool.root.1
[2026-01-09 21:48:53] -rw------- 1 boinc boinc   1310720 Jan  9 21:48 result.tar.gz
21:48:54 (2946781): run_atlas exited; CPU time 20293.556761
21:48:54 (2946781): called boinc_finish(0)

</stderr_txt>
]]>

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