Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
14:41:17 (1920415): wrapper (7.7.26015): starting
14:41:17 (1920415): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 14:41:18] Arguments: --nthreads 4
[2026-01-09 14:41:18] Threads: 4
[2026-01-09 14:41:18] Checking for CVMFS
[2026-01-09 14:41:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 14:41:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 14:41:18] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 14:41:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 14:41:18] 2.13.1.0 57563 2691 77432 154945 3 57 5147623 10240001 1822 130560 0 4878097 99.996 100209 331 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-01-09 14:41:18] CVMFS is ok
[2026-01-09 14:41:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 14:41:18] Checking for apptainer binary...
[2026-01-09 14:41:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 14:41:18] Running /usr/bin/apptainer --version
[2026-01-09 14:41:18] apptainer version 1.4.5
[2026-01-09 14:41:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 14:41:18] atlas7l2
[2026-01-09 14:41:18] apptainer works
[2026-01-09 14:41:18] Set ATHENA_PROC_NUMBER=4
[2026-01-09 14:41:18] Set ATHENA_CORE_NUMBER=4
[2026-01-09 14:41:18] Starting ATLAS job with PandaID=6963155293
[2026-01-09 14:41:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 16:45:41]  *** The last 200 lines of the pilot log: ***
[2026-01-09 16:45:41] 2026-01-09 15:44:57,024 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-6963155293/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 16:45:41] 2026-01-09 15:44:57,025 | INFO     | extracted standard info from prmon json
[2026-01-09 16:45:41] 2026-01-09 15:44:57,025 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 16:45:41] 2026-01-09 15:44:57,025 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 16:45:41] 2026-01-09 15:44:57,025 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 16:45:41] 2026-01-09 15:44:57,025 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 16:45:41] 2026-01-09 15:44:57,027 | INFO     | fitting pss+swap vs Time
[2026-01-09 16:45:41] 2026-01-09 15:44:57,027 | INFO     | sum of square deviations: 549294020.0
[2026-01-09 16:45:41] 2026-01-09 15:44:57,027 | INFO     | sum of deviations: 2195371944.000003
[2026-01-09 16:45:41] 2026-01-09 15:44:57,027 | INFO     | mean x: 1767969765.0
[2026-01-09 16:45:41] 2026-01-09 15:44:57,027 | INFO     | mean y: 2334502.132231405
[2026-01-09 16:45:41] 2026-01-09 15:44:57,027 | INFO     | intersect: -7063737726.218767
[2026-01-09 16:45:41] 2026-01-09 15:44:57,027 | INFO     | chi2: 1.5703157942711088
[2026-01-09 16:45:41] 2026-01-09 15:44:57,027 | INFO     | sum of square deviations: 483971865.0
[2026-01-09 16:45:41] 2026-01-09 15:44:57,028 | INFO     | sum of deviations: 2216157083.9999986
[2026-01-09 16:45:41] 2026-01-09 15:44:57,028 | INFO     | mean x: 1767969612.5
[2026-01-09 16:45:41] 2026-01-09 15:44:57,028 | INFO     | mean y: 2334550.7413793104
[2026-01-09 16:45:41] 2026-01-09 15:44:57,028 | INFO     | intersect: -8093380643.443735
[2026-01-09 16:45:41] 2026-01-09 15:44:57,028 | INFO     | chi2: 1.571818006728247
[2026-01-09 16:45:41] 2026-01-09 15:44:57,028 | INFO     | current chi2=1.571818006728247 (change=-0.09566308016633679 %)
[2026-01-09 16:45:41] 2026-01-09 15:44:57,028 | INFO     | right removable region: 115
[2026-01-09 16:45:41] 2026-01-09 15:44:57,028 | INFO     | sum of square deviations: 483971865.0
[2026-01-09 16:45:41] 2026-01-09 15:44:57,029 | INFO     | sum of deviations: -13579644167.5
[2026-01-09 16:45:41] 2026-01-09 15:44:57,029 | INFO     | mean x: 1767969917.5
[2026-01-09 16:45:41] 2026-01-09 15:44:57,029 | INFO     | mean y: 2370481.0086206896
[2026-01-09 16:45:41] 2026-01-09 15:44:57,029 | INFO     | intersect: 49609391290.97726
[2026-01-09 16:45:41] 2026-01-09 15:44:57,029 | INFO     | chi2: 0.07440112391896636
[2026-01-09 16:45:41] 2026-01-09 15:44:57,029 | INFO     | current chi2=0.07440112391896636 (change=95.26202791881737 %)
[2026-01-09 16:45:41] 2026-01-09 15:44:57,029 | INFO     | sum of square deviations: 424045160.0
[2026-01-09 16:45:41] 2026-01-09 15:44:57,029 | INFO     | sum of deviations: -9592359739.0
[2026-01-09 16:45:41] 2026-01-09 15:44:57,029 | INFO     | mean x: 1767970070.0
[2026-01-09 16:45:41] 2026-01-09 15:44:57,029 | INFO     | mean y: 2360367.5315315314
[2026-01-09 16:45:41] 2026-01-09 15:44:57,030 | INFO     | intersect: 39995753805.214
[2026-01-09 16:45:41] 2026-01-09 15:44:57,030 | INFO     | chi2: 0.05174380155510352
[2026-01-09 16:45:41] 2026-01-09 15:44:57,030 | INFO     | current chi2=0.05174380155510352 (change=30.452930238715158 %)
[2026-01-09 16:45:41] 2026-01-09 15:44:57,030 | INFO     | sum of square deviations: 369281342.5
[2026-01-09 16:45:41] 2026-01-09 15:44:57,030 | INFO     | sum of deviations: -6957444974.999999
[2026-01-09 16:45:41] 2026-01-09 15:44:57,030 | INFO     | mean x: 1767970222.5
[2026-01-09 16:45:41] 2026-01-09 15:44:57,030 | INFO     | mean y: 2353024.1886792453
[2026-01-09 16:45:41] 2026-01-09 15:44:57,030 | INFO     | intersect: 33311795242.982216
[2026-01-09 16:45:41] 2026-01-09 15:44:57,030 | INFO     | chi2: 0.0448809632007408
[2026-01-09 16:45:41] 2026-01-09 15:44:57,030 | INFO     | current chi2=0.0448809632007408 (change=13.26311200203231 %)
[2026-01-09 16:45:41] 2026-01-09 15:44:57,030 | INFO     | left removable region: 30
[2026-01-09 16:45:41] 2026-01-09 15:44:57,031 | INFO     | sum of square deviations: 190403570.0
[2026-01-09 16:45:41] 2026-01-09 15:44:57,031 | INFO     | sum of deviations: -3156262.000000039
[2026-01-09 16:45:41] 2026-01-09 15:44:57,031 | INFO     | mean x: 1767970497.0
[2026-01-09 16:45:41] 2026-01-09 15:44:57,031 | INFO     | mean y: 2329241.470588235
[2026-01-09 16:45:41] 2026-01-09 15:44:57,031 | INFO     | intersect: 31636350.03374324
[2026-01-09 16:45:41] 2026-01-09 15:44:57,031 | INFO     | chi2: 0.003213888226702353
[2026-01-09 16:45:41] 2026-01-09 15:44:57,031 | INFO     | current memory leak: -0.02 B/s (using 85 data points, chi2=0.00)
[2026-01-09 16:45:41] 2026-01-09 15:44:57,031 | INFO     | could have reported an average CPU frequency of 2400 MHz (8 samples)
[2026-01-09 16:45:41] 2026-01-09 15:44:57,031 | INFO     | ..............................
[2026-01-09 16:45:41] 2026-01-09 15:44:57,031 | INFO     | . Timing measurements:
[2026-01-09 16:45:41] 2026-01-09 15:44:57,031 | INFO     | . get job = 0 s
[2026-01-09 16:45:41] 2026-01-09 15:44:57,032 | INFO     | . initial setup = 1 s
[2026-01-09 16:45:41] 2026-01-09 15:44:57,032 | INFO     | . payload setup = 3 s
[2026-01-09 16:45:41] 2026-01-09 15:44:57,032 | INFO     | . stage-in = 0 s
[2026-01-09 16:45:41] 2026-01-09 15:44:57,032 | INFO     | . payload execution = 7381 s
[2026-01-09 16:45:41] 2026-01-09 15:44:57,032 | INFO     | . stage-out = 0 s
[2026-01-09 16:45:41] 2026-01-09 15:44:57,032 | INFO     | . log creation = 0 s
[2026-01-09 16:45:41] 2026-01-09 15:44:57,032 | INFO     | ..............................
[2026-01-09 16:45:41] 2026-01-09 15:44:57,079 | INFO     | 
[2026-01-09 16:45:41] 2026-01-09 15:44:57,079 | INFO     | job summary report
[2026-01-09 16:45:41] 2026-01-09 15:44:57,080 | INFO     | --------------------------------------------------
[2026-01-09 16:45:41] 2026-01-09 15:44:57,080 | INFO     | PanDA job id: 6963155293
[2026-01-09 16:45:41] 2026-01-09 15:44:57,080 | INFO     | task id: 47898826
[2026-01-09 16:45:41] 2026-01-09 15:44:57,080 | INFO     | errors: (none)
[2026-01-09 16:45:41] 2026-01-09 15:44:57,080 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 16:45:41] 2026-01-09 15:44:57,080 | INFO     | pilot state: finished 
[2026-01-09 16:45:41] 2026-01-09 15:44:57,080 | INFO     | transexitcode: 0
[2026-01-09 16:45:41] 2026-01-09 15:44:57,080 | INFO     | exeerrorcode: 0
[2026-01-09 16:45:41] 2026-01-09 15:44:57,080 | INFO     | exeerrordiag: 
[2026-01-09 16:45:41] 2026-01-09 15:44:57,080 | INFO     | exitcode: 0
[2026-01-09 16:45:41] 2026-01-09 15:44:57,080 | INFO     | exitmsg: OK
[2026-01-09 16:45:41] 2026-01-09 15:44:57,080 | INFO     | cpuconsumptiontime: 28258 s
[2026-01-09 16:45:41] 2026-01-09 15:44:57,080 | INFO     | nevents: 400
[2026-01-09 16:45:41] 2026-01-09 15:44:57,080 | INFO     | neventsw: 0
[2026-01-09 16:45:41] 2026-01-09 15:44:57,080 | INFO     | pid: 1930760
[2026-01-09 16:45:41] 2026-01-09 15:44:57,080 | INFO     | pgrp: 1930760
[2026-01-09 16:45:41] 2026-01-09 15:44:57,080 | INFO     | corecount: 4
[2026-01-09 16:45:41] 2026-01-09 15:44:57,080 | INFO     | event service: False
[2026-01-09 16:45:41] 2026-01-09 15:44:57,080 | INFO     | sizes: {0: 2283985, 3: 2284247, 11: 2284275, 7388: 2311937, 7389: 2320963, 7392: 2321019, 7398: 2321341}
[2026-01-09 16:45:41] 2026-01-09 15:44:57,080 | INFO     | --------------------------------------------------
[2026-01-09 16:45:41] 2026-01-09 15:44:57,080 | INFO     | 
[2026-01-09 16:45:41] 2026-01-09 15:44:57,080 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/1
[2026-01-09 16:45:41] 2026-01-09 15:44:57,092 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 16:45:41] 2026-01-09 15:44:57,093 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 16:45:41] 2026-01-09 15:44:57,093 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 16:45:41] 2026-01-09 15:44:57,093 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 16:45:41] 2026-01-09 15:44:57,093 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 16:45:41] 2026-01-09 15:44:57,093 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 16:45:41] 2026-01-09 15:44:57,093 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 16:45:41] 2026-01-09 15:44:57,093 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 16:45:41] 2026-01-09 15:44:57,093 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 16:45:41] 2026-01-09 15:44:57,093 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 16:45:41] 2026-01-09 15:44:57,093 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 16:45:41] 2026-01-09 15:44:57,093 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 16:45:41] 2026-01-09 15:44:57,093 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 16:45:41] 2026-01-09 15:44:57,093 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 16:45:41] 2026-01-09 15:44:57,093 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 16:45:41] 2026-01-09 15:44:57,093 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 16:45:41] 2026-01-09 15:44:57,093 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 16:45:41] 2026-01-09 15:44:57,093 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 16:45:41] 2026-01-09 15:44:57,093 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 16:45:41] 2026-01-09 15:44:57,093 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 16:45:41] 2026-01-09 15:44:57,094 | INFO     | job 6963155293 has completed (purged errors)
[2026-01-09 16:45:41] 2026-01-09 15:44:57,094 | INFO     | overall cleanup function is called
[2026-01-09 16:45:41] 2026-01-09 15:44:58,098 | INFO     | --- collectZombieJob: --- 10, [1930760]
[2026-01-09 16:45:41] 2026-01-09 15:44:58,098 | INFO     | zombie collector waiting for pid 1930760
[2026-01-09 16:45:41] 2026-01-09 15:44:58,098 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 16:45:41] 2026-01-09 15:44:58,098 | INFO     | collected zombie processes
[2026-01-09 16:45:41] 2026-01-09 15:44:58,098 | INFO     | will attempt to kill all subprocesses of pid=1930760
[2026-01-09 16:45:41] 2026-01-09 15:44:58,187 | INFO     | process IDs to be killed: [1930760] (in reverse order)
[2026-01-09 16:45:41] 2026-01-09 15:44:58,217 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 16:45:41] 2026-01-09 15:44:58,217 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 16:45:41] 2026-01-09 15:44:58,220 | INFO     | did not find any defunct processes belonging to 1930760
[2026-01-09 16:45:41] 2026-01-09 15:44:58,222 | INFO     | did not find any defunct processes belonging to 1930760
[2026-01-09 16:45:41] 2026-01-09 15:44:58,222 | INFO     | ready for new job
[2026-01-09 16:45:41] 2026-01-09 15:44:58,222 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 16:45:41] 2026-01-09 15:44:58,223 | INFO     | ***************************************
[2026-01-09 16:45:41] 2026-01-09 15:44:58,223 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 16:45:41] 2026-01-09 15:44:58,223 | INFO     | ***************************************
[2026-01-09 16:45:41] 2026-01-09 15:44:58,223 | INFO     | 
[2026-01-09 16:45:41] 2026-01-09 15:44:58,224 | INFO     | pilot is running in a VM
[2026-01-09 16:45:41] 2026-01-09 15:44:58,224 | INFO     | architecture information:
[2026-01-09 16:45:41] 2026-01-09 15:44:58,224 | INFO     | executing command: cat /etc/os-release
[2026-01-09 16:45:41] 2026-01-09 15:44:58,232 | INFO     | cat /etc/os-release:
[2026-01-09 16:45:41] NAME="CentOS Linux"
[2026-01-09 16:45:41] VERSION="7 (Core)"
[2026-01-09 16:45:41] ID="centos"
[2026-01-09 16:45:41] ID_LIKE="rhel fedora"
[2026-01-09 16:45:41] VERSION_ID="7"
[2026-01-09 16:45:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 16:45:41] ANSI_COLOR="0;31"
[2026-01-09 16:45:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 16:45:41] HOME_URL="https://www.centos.org/"
[2026-01-09 16:45:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 16:45:41] 
[2026-01-09 16:45:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 16:45:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 16:45:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 16:45:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 16:45:41] 
[2026-01-09 16:45:41] 2026-01-09 15:44:58,232 | INFO     | ***************************************
[2026-01-09 16:45:41] 2026-01-09 15:44:58,735 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/1
[2026-01-09 16:45:41] 2026-01-09 15:44:58,745 | INFO     | sufficient remaining disk space (167021379584 B)
[2026-01-09 16:45:41] 2026-01-09 15:44:58,745 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 16:45:41] 2026-01-09 15:44:58,745 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 16:45:41] 2026-01-09 15:44:58,745 | INFO     | update_server=False
[2026-01-09 16:45:41] 2026-01-09 15:44:58,745 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 16:45:41] 2026-01-09 15:44:58,745 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:45:41] 2026-01-09 15:44:58,773 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 16:45:41] 2026-01-09 15:44:58,830 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 16:45:41] 2026-01-09 15:44:58,831 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 16:45:41] 2026-01-09 15:44:58,831 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 16:45:41] 2026-01-09 15:44:58,831 | INFO     | will abort loop
[2026-01-09 16:45:41] 2026-01-09 15:44:59,590 | INFO     | all payload control threads have been joined
[2026-01-09 16:45:41] 2026-01-09 15:44:59,601 | INFO     | all data control threads have been joined
[2026-01-09 16:45:41] 2026-01-09 15:44:59,750 | INFO     | [job] retrieve thread has finished
[2026-01-09 16:45:41] 2026-01-09 15:44:59,751 | INFO     | [job] queue monitor thread has finished
[2026-01-09 16:45:41] 2026-01-09 15:44:59,772 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 16:45:41] 2026-01-09 15:44:59,836 | INFO     | [job] job monitor thread has finished
[2026-01-09 16:45:41] 2026-01-09 15:44:59,919 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 16:45:41] 2026-01-09 15:45:00,149 | INFO     | [data] copytool_in thread has finished
[2026-01-09 16:45:41] 2026-01-09 15:45:00,213 | INFO     | all job control threads have been joined
[2026-01-09 16:45:41] 2026-01-09 15:45:00,300 | INFO     | [payload] failed_post thread has finished
[2026-01-09 16:45:41] 2026-01-09 15:45:00,500 | INFO     | [job] validate thread has finished
[2026-01-09 16:45:41] 2026-01-09 15:45:00,596 | INFO     | [payload] control thread has finished
[2026-01-09 16:45:41] 2026-01-09 15:45:00,606 | INFO     | [data] control thread has finished
[2026-01-09 16:45:41] 2026-01-09 15:45:00,779 | INFO     | [data] copytool_out thread has finished
[2026-01-09 16:45:41] 2026-01-09 15:45:00,785 | INFO     | [payload] validate_post thread has finished
[2026-01-09 16:45:41] 2026-01-09 15:45:00,956 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 16:45:41] 2026-01-09 15:45:01,218 | INFO     | [job] control thread has finished
[2026-01-09 16:45:41] 2026-01-09 15:45:01,834 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 16:45:41] 2026-01-09 15:45:05,839 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 16:45:41] 2026-01-09 15:45:09,351 | INFO     | job.realtimelogging is not enabled
[2026-01-09 16:45:41] 2026-01-09 15:45:10,354 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 16:45:41] 2026-01-09 15:45:28,659 | INFO     | PID=1924216 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 16:45:41] 2026-01-09 15:45:28,660 | INFO     | .. there are 3 such processes running
[2026-01-09 16:45:41] 2026-01-09 15:45:28,660 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 16:45:41] 2026-01-09 15:45:28,660 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 16:45:41] 2026-01-09 15:45:28,660 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 16:45:41] 2026-01-09 15:45:35,599 | INFO     | [monitor] cgroup control has ended
[2026-01-09 16:45:41] 2026-01-09 15:45:36,198 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137689165117248)>', '<ExcThread(monitor, started 137688883627776)>']
[2026-01-09 16:45:41] 2026-01-09 15:45:36,670 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 16:45:41] 2026-01-09 15:45:36,670 | INFO     | [monitor] control thread has ended
[2026-01-09 16:45:41] 2026-01-09 15:45:41,220 | INFO     | all workflow threads have been joined
[2026-01-09 16:45:41] 2026-01-09 15:45:41,220 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 16:45:41] 2026-01-09 15:45:41,220 | INFO     | traces error code: 0
[2026-01-09 16:45:41] 2026-01-09 15:45:41,221 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 16:45:41] 2026-01-09 15:45:41,291 [wrapper] ==== pilot stdout END ====
[2026-01-09 16:45:41] 2026-01-09 15:45:41,295 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 16:45:41] 2026-01-09 15:45:41,298 [wrapper] pilotpid: 1924216
[2026-01-09 16:45:41] 2026-01-09 15:45:41,300 [wrapper] Pilot exit status: 0
[2026-01-09 16:45:41] 2026-01-09 15:45:41,309 [wrapper] pandaids: 6963155293
[2026-01-09 16:45:41] 2026-01-09 15:45:41,333 [wrapper] cleanup supervisor_pilot 2005464 1924217
[2026-01-09 16:45:41] 2026-01-09 15:45:41,336 [wrapper] Test setup, not cleaning
[2026-01-09 16:45:41] 2026-01-09 15:45:41,339 [wrapper] apfmon messages muted
[2026-01-09 16:45:41] 2026-01-09 15:45:41,341 [wrapper] ==== wrapper stdout END ====
[2026-01-09 16:45:41] 2026-01-09 15:45:41,343 [wrapper] ==== wrapper stderr END ====
[2026-01-09 16:45:41]  *** Error codes and diagnostics ***
[2026-01-09 16:45:41]     "exeErrorCode": 0,
[2026-01-09 16:45:41]     "exeErrorDiag": "",
[2026-01-09 16:45:41]     "pilotErrorCode": 0,
[2026-01-09 16:45:41]     "pilotErrorDiag": "",
[2026-01-09 16:45:41]  *** Listing of results directory ***
[2026-01-09 16:45:41] insgesamt 433412
[2026-01-09 16:45:41] -rw-r--r-- 1 yeti boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 16:45:41] -rwx------ 1 yeti boinc     36322 Jan  8 20:09 runpilot2-wrapper.sh
[2026-01-09 16:45:41] -rw-r--r-- 1 yeti boinc      5112 Jan  8 20:11 queuedata.json
[2026-01-09 16:45:41] -rw-r--r-- 1 yeti boinc       100 Jan  9 14:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 16:45:41] -rwxr-xr-x 1 yeti boinc      7986 Jan  9 14:41 run_atlas
[2026-01-09 16:45:41] -rw-r--r-- 1 yeti boinc       105 Jan  9 14:41 job.xml
[2026-01-09 16:45:41] -rw-r--r-- 2 yeti boinc 222464606 Jan  9 14:41 EVNT.47898824._001182.pool.root.1
[2026-01-09 16:45:41] -rw-r--r-- 2 yeti boinc     15847 Jan  9 14:41 start_atlas.sh
[2026-01-09 16:45:41] drwxrwx--x 2 yeti boinc      4096 Jan  9 14:41 shared
[2026-01-09 16:45:41] -rw-r--r-- 2 yeti boinc    592401 Jan  9 14:41 input.tar.gz
[2026-01-09 16:45:41] -rw-r--r-- 1 yeti boinc      6615 Jan  9 14:41 init_data.xml
[2026-01-09 16:45:41] -rw-r--r-- 1 yeti boinc         0 Jan  9 14:41 boinc_setup_complete
[2026-01-09 16:45:41] -rw-r--r-- 1 yeti boinc         0 Jan  9 14:41 boinc_lockfile
[2026-01-09 16:45:41] -rw-r--r-- 1 yeti boinc      2520 Jan  9 14:41 pandaJob.out
[2026-01-09 16:45:41] -rw------- 1 yeti boinc        52 Jan  9 14:41 setup.sh.local
[2026-01-09 16:45:41] -rw------- 1 yeti boinc    989377 Jan  9 14:41 agis_schedconf.cvmfs.json
[2026-01-09 16:45:41] -rw------- 1 yeti boinc   1516240 Jan  9 14:41 agis_ddmendpoints.agis.ALL.json
[2026-01-09 16:45:41] drwx------ 5 yeti boinc      4096 Jan  9 14:41 pilot3
[2026-01-09 16:45:41] -rw------- 1 yeti boinc 214599058 Jan  9 16:44 HITS.47898826._030543.pool.root.1
[2026-01-09 16:45:41] -rw-r--r-- 1 yeti boinc       529 Jan  9 16:44 boinc_task_state.xml
[2026-01-09 16:45:41] -rw------- 1 yeti boinc      1022 Jan  9 16:44 memory_monitor_summary.json
[2026-01-09 16:45:41] -rw------- 1 yeti boinc    316168 Jan  9 16:44 log.47898826._030543.job.log.tgz.1
[2026-01-09 16:45:41] -rw------- 1 yeti boinc      7767 Jan  9 16:44 heartbeat.json
[2026-01-09 16:45:41] -rw------- 1 yeti boinc        95 Jan  9 16:45 pilot_heartbeat.json
[2026-01-09 16:45:41] -rw-r--r-- 1 yeti boinc      8192 Jan  9 16:45 boinc_mmap_file
[2026-01-09 16:45:41] -rw-r--r-- 1 yeti boinc        27 Jan  9 16:45 wrapper_checkpoint.txt
[2026-01-09 16:45:41] -rw------- 1 yeti boinc      5158 Jan  9 16:45 pilotlog.txt
[2026-01-09 16:45:41] -rw------- 1 yeti boinc   1101206 Jan  9 16:45 log.47898826._030543.job.log.1
[2026-01-09 16:45:41] -rw------- 1 yeti boinc       357 Jan  9 16:45 output.list
[2026-01-09 16:45:41] -rw-r--r-- 1 yeti boinc       620 Jan  9 16:45 runtime_log
[2026-01-09 16:45:41] -rw------- 1 yeti boinc   1433600 Jan  9 16:45 result.tar.gz
[2026-01-09 16:45:41] -rw-r--r-- 1 yeti boinc      9545 Jan  9 16:45 runtime_log.err
[2026-01-09 16:45:41] -rw------- 1 yeti boinc       639 Jan  9 16:45 CScNDmMZAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYIlKDmjEWkKo.diag
[2026-01-09 16:45:41] -rw-r--r-- 1 yeti boinc     20747 Jan  9 16:45 stderr.txt
[2026-01-09 16:45:41] HITS file was successfully produced:
[2026-01-09 16:45:41] -rw------- 1 yeti boinc 214599058 Jan  9 16:44 shared/HITS.pool.root.1
[2026-01-09 16:45:41]  *** Contents of shared directory: ***
[2026-01-09 16:45:41] insgesamt 428828
[2026-01-09 16:45:41] -rw-r--r-- 2 yeti boinc 222464606 Jan  9 14:41 ATLAS.root_0
[2026-01-09 16:45:41] -rw-r--r-- 2 yeti boinc     15847 Jan  9 14:41 start_atlas.sh
[2026-01-09 16:45:41] -rw-r--r-- 2 yeti boinc    592401 Jan  9 14:41 input.tar.gz
[2026-01-09 16:45:41] -rw------- 1 yeti boinc 214599058 Jan  9 16:44 HITS.pool.root.1
[2026-01-09 16:45:41] -rw------- 1 yeti boinc   1433600 Jan  9 16:45 result.tar.gz
16:45:42 (1920415): run_atlas exited; CPU time 28351.907027
16:45:42 (1920415): called boinc_finish(0)

</stderr_txt>
]]>

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