Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:19:46 (986114): wrapper (7.7.26015): starting
11:19:46 (986114): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 11:19:46] Arguments: --nthreads 4
[2026-01-09 11:19:46] Threads: 4
[2026-01-09 11:19:46] Checking for CVMFS
[2026-01-09 11:19:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 11:19:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 11:19:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 11:19:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 11:19:46] 2.12.7.0 702796 1479 75180 154940 0 56 3794930 4097024 0 130560 0 892260 99.985 57464 28017 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-01-09 11:19:46] CVMFS is ok
[2026-01-09 11:19:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 11:19:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 11:19:46] Further information can be found at the LHC@home message board.
[2026-01-09 11:19:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 11:19:46] Checking for apptainer binary...
[2026-01-09 11:19:46] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2026-01-09 11:19:46] apptainer is not installed, using version from CVMFS
[2026-01-09 11:19:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 11:19:46] pckeatlas05
[2026-01-09 11:19:46] apptainer works
[2026-01-09 11:19:46] Set ATHENA_PROC_NUMBER=4
[2026-01-09 11:19:46] Set ATHENA_CORE_NUMBER=4
[2026-01-09 11:19:46] Starting ATLAS job with PandaID=6963146803
[2026-01-09 11:19:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:27:15]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:27:15] 2026-01-09 13:26:37,318 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 14:27:15] 2026-01-09 13:26:37,319 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3780.4795
[2026-01-09 14:27:15] 2026-01-09 13:26:37,319 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6963146803/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 14:27:15] 2026-01-09 13:26:37,320 | INFO     | extracted standard info from prmon json
[2026-01-09 14:27:15] 2026-01-09 13:26:37,320 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 14:27:15] 2026-01-09 13:26:37,320 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 14:27:15] 2026-01-09 13:26:37,320 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 14:27:15] 2026-01-09 13:26:37,320 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 14:27:15] 2026-01-09 13:26:37,322 | INFO     | fitting pss+swap vs Time
[2026-01-09 14:27:15] 2026-01-09 13:26:37,322 | INFO     | sum of square deviations: 1931608310.0
[2026-01-09 14:27:15] 2026-01-09 13:26:37,323 | INFO     | sum of deviations: -68520712478.5
[2026-01-09 14:27:15] 2026-01-09 13:26:37,323 | INFO     | mean x: 1767959591.5
[2026-01-09 14:27:15] 2026-01-09 13:26:37,323 | INFO     | mean y: 2466158.0815217393
[2026-01-09 14:27:15] 2026-01-09 13:26:37,323 | INFO     | intersect: 62718002333.62107
[2026-01-09 14:27:15] 2026-01-09 13:26:37,323 | INFO     | chi2: 2.2671328931716532
[2026-01-09 14:27:15] 2026-01-09 13:26:37,324 | INFO     | sum of square deviations: 1778377530.0
[2026-01-09 14:27:15] 2026-01-09 13:26:37,324 | INFO     | sum of deviations: -54182690569.0
[2026-01-09 14:27:15] 2026-01-09 13:26:37,324 | INFO     | mean x: 1767959439.0
[2026-01-09 14:27:15] 2026-01-09 13:26:37,324 | INFO     | mean y: 2480169.3296089387
[2026-01-09 14:27:15] 2026-01-09 13:26:37,324 | INFO     | intersect: 53867757707.94079
[2026-01-09 14:27:15] 2026-01-09 13:26:37,324 | INFO     | chi2: 1.4577958353412892
[2026-01-09 14:27:15] 2026-01-09 13:26:37,325 | INFO     | current chi2=1.4577958353412892 (change=35.69870386813209 %)
[2026-01-09 14:27:15] 2026-01-09 13:26:37,325 | INFO     | sum of square deviations: 1633472487.5
[2026-01-09 14:27:15] 2026-01-09 13:26:37,325 | INFO     | sum of deviations: -51890503969.49999
[2026-01-09 14:27:15] 2026-01-09 13:26:37,325 | INFO     | mean x: 1767959286.5
[2026-01-09 14:27:15] 2026-01-09 13:26:37,325 | INFO     | mean y: 2482582.235632184
[2026-01-09 14:27:15] 2026-01-09 13:26:37,325 | INFO     | intersect: 56165227333.72483
[2026-01-09 14:27:15] 2026-01-09 13:26:37,326 | INFO     | chi2: 1.4482393406168308
[2026-01-09 14:27:15] 2026-01-09 13:26:37,326 | INFO     | current chi2=1.4482393406168308 (change=0.6555441093176884 %)
[2026-01-09 14:27:15] 2026-01-09 13:26:37,326 | INFO     | right removable region: 173
[2026-01-09 14:27:15] 2026-01-09 13:26:37,326 | INFO     | sum of square deviations: 1778377530.0
[2026-01-09 14:27:15] 2026-01-09 13:26:37,326 | INFO     | sum of deviations: -81420275332.0
[2026-01-09 14:27:15] 2026-01-09 13:26:37,327 | INFO     | mean x: 1767959744.0
[2026-01-09 14:27:15] 2026-01-09 13:26:37,327 | INFO     | mean y: 2478640.346368715
[2026-01-09 14:27:15] 2026-01-09 13:26:37,327 | INFO     | intersect: 80945791690.62555
[2026-01-09 14:27:15] 2026-01-09 13:26:37,327 | INFO     | chi2: 1.219756317676284
[2026-01-09 14:27:15] 2026-01-09 13:26:37,327 | INFO     | current chi2=1.219756317676284 (change=46.19828765441799 %)
[2026-01-09 14:27:15] 2026-01-09 13:26:37,327 | INFO     | sum of square deviations: 1633472487.5
[2026-01-09 14:27:15] 2026-01-09 13:26:37,328 | INFO     | sum of deviations: -73610552814.00002
[2026-01-09 14:27:15] 2026-01-09 13:26:37,328 | INFO     | mean x: 1767959896.5
[2026-01-09 14:27:15] 2026-01-09 13:26:37,328 | INFO     | mean y: 2470414.804597701
[2026-01-09 14:27:15] 2026-01-09 13:26:37,328 | INFO     | intersect: 79673543132.7326
[2026-01-09 14:27:15] 2026-01-09 13:26:37,328 | INFO     | chi2: 1.216270098070542
[2026-01-09 14:27:15] 2026-01-09 13:26:37,328 | INFO     | current chi2=1.216270098070542 (change=0.28581279352447964 %)
[2026-01-09 14:27:15] 2026-01-09 13:26:37,328 | INFO     | left removable region: 20
[2026-01-09 14:27:15] 2026-01-09 13:26:37,328 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 14:27:15] 2026-01-09 13:26:37,329 | INFO     | sum of deviations: -42181769986.0
[2026-01-09 14:27:15] 2026-01-09 13:26:37,329 | INFO     | mean x: 1767959866.0
[2026-01-09 14:27:15] 2026-01-09 13:26:37,329 | INFO     | mean y: 2468950.790849673
[2026-01-09 14:27:15] 2026-01-09 13:26:37,329 | INFO     | intersect: 67155100701.62882
[2026-01-09 14:27:15] 2026-01-09 13:26:37,329 | INFO     | chi2: 0.35136818809642134
[2026-01-09 14:27:15] 2026-01-09 13:26:37,329 | INFO     | current memory leak: -37.98 B/s (using 153 data points, chi2=0.35)
[2026-01-09 14:27:15] 2026-01-09 13:26:37,329 | INFO     | could have reported an average CPU frequency of 3726 MHz (10 samples)
[2026-01-09 14:27:15] 2026-01-09 13:26:37,329 | INFO     | ..............................
[2026-01-09 14:27:15] 2026-01-09 13:26:37,329 | INFO     | . Timing measurements:
[2026-01-09 14:27:15] 2026-01-09 13:26:37,329 | INFO     | . get job = 0 s
[2026-01-09 14:27:15] 2026-01-09 13:26:37,330 | INFO     | . initial setup = 0 s
[2026-01-09 14:27:15] 2026-01-09 13:26:37,330 | INFO     | . payload setup = 3 s
[2026-01-09 14:27:15] 2026-01-09 13:26:37,330 | INFO     | . stage-in = 0 s
[2026-01-09 14:27:15] 2026-01-09 13:26:37,330 | INFO     | . payload execution = 11183 s
[2026-01-09 14:27:15] 2026-01-09 13:26:37,330 | INFO     | . stage-out = 0 s
[2026-01-09 14:27:15] 2026-01-09 13:26:37,330 | INFO     | . log creation = 0 s
[2026-01-09 14:27:15] 2026-01-09 13:26:37,330 | INFO     | ..............................
[2026-01-09 14:27:15] 2026-01-09 13:26:37,766 | INFO     | time since job start (11207s) is within the limit (349056.0s)
[2026-01-09 14:27:15] 2026-01-09 13:26:37,800 | INFO     | 
[2026-01-09 14:27:15] 2026-01-09 13:26:37,800 | INFO     | job summary report
[2026-01-09 14:27:15] 2026-01-09 13:26:37,800 | INFO     | --------------------------------------------------
[2026-01-09 14:27:15] 2026-01-09 13:26:37,800 | INFO     | PanDA job id: 6963146803
[2026-01-09 14:27:15] 2026-01-09 13:26:37,800 | INFO     | task id: 47898826
[2026-01-09 14:27:15] 2026-01-09 13:26:37,800 | INFO     | errors: (none)
[2026-01-09 14:27:15] 2026-01-09 13:26:37,800 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:27:15] 2026-01-09 13:26:37,801 | INFO     | pilot state: finished 
[2026-01-09 14:27:15] 2026-01-09 13:26:37,801 | INFO     | transexitcode: 0
[2026-01-09 14:27:15] 2026-01-09 13:26:37,801 | INFO     | exeerrorcode: 0
[2026-01-09 14:27:15] 2026-01-09 13:26:37,801 | INFO     | exeerrordiag: 
[2026-01-09 14:27:15] 2026-01-09 13:26:37,801 | INFO     | exitcode: 0
[2026-01-09 14:27:15] 2026-01-09 13:26:37,801 | INFO     | exitmsg: OK
[2026-01-09 14:27:15] 2026-01-09 13:26:37,801 | INFO     | cpuconsumptiontime: 43553 s
[2026-01-09 14:27:15] 2026-01-09 13:26:37,801 | INFO     | nevents: 400
[2026-01-09 14:27:15] 2026-01-09 13:26:37,801 | INFO     | neventsw: 0
[2026-01-09 14:27:15] 2026-01-09 13:26:37,801 | INFO     | pid: 996954
[2026-01-09 14:27:15] 2026-01-09 13:26:37,801 | INFO     | pgrp: 996954
[2026-01-09 14:27:15] 2026-01-09 13:26:37,801 | INFO     | corecount: 4
[2026-01-09 14:27:15] 2026-01-09 13:26:37,801 | INFO     | event service: False
[2026-01-09 14:27:15] 2026-01-09 13:26:37,801 | INFO     | sizes: {0: 2283799, 1: 2283998, 3: 2284260, 11: 2284288, 11190: 2313692, 11191: 2322873, 11192: 2322873, 11194: 2323067}
[2026-01-09 14:27:15] 2026-01-09 13:26:37,801 | INFO     | --------------------------------------------------
[2026-01-09 14:27:15] 2026-01-09 13:26:37,801 | INFO     | 
[2026-01-09 14:27:15] 2026-01-09 13:26:37,801 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-09 14:27:15] 2026-01-09 13:26:37,810 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:27:15] 2026-01-09 13:26:37,810 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:27:15] 2026-01-09 13:26:37,810 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:27:15] 2026-01-09 13:26:37,810 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:27:15] 2026-01-09 13:26:37,810 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:27:15] 2026-01-09 13:26:37,810 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:27:15] 2026-01-09 13:26:37,810 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:27:15] 2026-01-09 13:26:37,811 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:27:15] 2026-01-09 13:26:37,811 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:27:15] 2026-01-09 13:26:37,811 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:27:15] 2026-01-09 13:26:37,811 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:27:15] 2026-01-09 13:26:37,811 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:27:15] 2026-01-09 13:26:37,811 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:27:15] 2026-01-09 13:26:37,811 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:27:15] 2026-01-09 13:26:37,811 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:27:15] 2026-01-09 13:26:37,811 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:27:15] 2026-01-09 13:26:37,811 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:27:15] 2026-01-09 13:26:37,811 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:27:15] 2026-01-09 13:26:37,811 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:27:15] 2026-01-09 13:26:37,811 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:27:15] 2026-01-09 13:26:37,811 | INFO     | job 6963146803 has completed (purged errors)
[2026-01-09 14:27:15] 2026-01-09 13:26:37,811 | INFO     | overall cleanup function is called
[2026-01-09 14:27:15] 2026-01-09 13:26:38,817 | INFO     | --- collectZombieJob: --- 10, [996954]
[2026-01-09 14:27:15] 2026-01-09 13:26:38,818 | INFO     | zombie collector waiting for pid 996954
[2026-01-09 14:27:15] 2026-01-09 13:26:38,818 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:27:15] 2026-01-09 13:26:38,818 | INFO     | collected zombie processes
[2026-01-09 14:27:15] 2026-01-09 13:26:38,818 | INFO     | will attempt to kill all subprocesses of pid=996954
[2026-01-09 14:27:15] 2026-01-09 13:26:38,860 | INFO     | process IDs to be killed: [996954] (in reverse order)
[2026-01-09 14:27:15] 2026-01-09 13:26:38,879 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:27:15] 2026-01-09 13:26:38,879 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:27:15] 2026-01-09 13:26:38,880 | INFO     | did not find any defunct processes belonging to 996954
[2026-01-09 14:27:15] 2026-01-09 13:26:38,881 | INFO     | did not find any defunct processes belonging to 996954
[2026-01-09 14:27:15] 2026-01-09 13:26:38,881 | INFO     | ready for new job
[2026-01-09 14:27:15] 2026-01-09 13:26:38,882 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:27:15] 2026-01-09 13:26:38,882 | INFO     | ***************************************
[2026-01-09 14:27:15] 2026-01-09 13:26:38,882 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:27:15] 2026-01-09 13:26:38,883 | INFO     | ***************************************
[2026-01-09 14:27:15] 2026-01-09 13:26:38,883 | INFO     | 
[2026-01-09 14:27:15] 2026-01-09 13:26:38,883 | INFO     | architecture information:
[2026-01-09 14:27:15] 2026-01-09 13:26:38,883 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:27:15] 2026-01-09 13:26:38,888 | INFO     | cat /etc/os-release:
[2026-01-09 14:27:15] NAME="CentOS Linux"
[2026-01-09 14:27:15] VERSION="7 (Core)"
[2026-01-09 14:27:15] ID="centos"
[2026-01-09 14:27:15] ID_LIKE="rhel fedora"
[2026-01-09 14:27:15] VERSION_ID="7"
[2026-01-09 14:27:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:27:15] ANSI_COLOR="0;31"
[2026-01-09 14:27:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:27:15] HOME_URL="https://www.centos.org/"
[2026-01-09 14:27:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:27:15] 
[2026-01-09 14:27:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:27:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:27:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:27:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:27:15] 
[2026-01-09 14:27:15] 2026-01-09 13:26:38,889 | INFO     | ***************************************
[2026-01-09 14:27:15] 2026-01-09 13:26:39,391 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-09 14:27:15] 2026-01-09 13:26:39,399 | INFO     | sufficient remaining disk space (43888148480 B)
[2026-01-09 14:27:15] 2026-01-09 13:26:39,399 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:27:15] 2026-01-09 13:26:39,399 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:27:15] 2026-01-09 13:26:39,399 | INFO     | update_server=False
[2026-01-09 14:27:15] 2026-01-09 13:26:39,399 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:27:15] 2026-01-09 13:26:39,400 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 14:27:15] 2026-01-09 13:26:39,400 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:27:15] 2026-01-09 13:26:39,400 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:27:15] 2026-01-09 13:26:39,400 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:27:15] 2026-01-09 13:26:39,694 | INFO     | all job control threads have been joined
[2026-01-09 14:27:15] 2026-01-09 13:26:39,696 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 14:27:15] 2026-01-09 13:26:39,696 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 14:27:15] 2026-01-09 13:26:39,696 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:27:15] 2026-01-09 13:26:39,696 | INFO     | will abort loop
[2026-01-09 14:27:15] 2026-01-09 13:26:40,290 | INFO     | all data control threads have been joined
[2026-01-09 14:27:15] 2026-01-09 13:26:40,405 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:27:15] 2026-01-09 13:26:40,504 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:27:15] 2026-01-09 13:26:40,512 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:27:15] 2026-01-09 13:26:40,697 | INFO     | [job] control thread has finished
[2026-01-09 14:27:15] 2026-01-09 13:26:40,700 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:27:15] 2026-01-09 13:26:40,804 | INFO     | all payload control threads have been joined
[2026-01-09 14:27:15] 2026-01-09 13:26:40,912 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:27:15] 2026-01-09 13:26:41,051 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:27:15] 2026-01-09 13:26:41,054 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:27:15] 2026-01-09 13:26:41,295 | INFO     | [data] control thread has finished
[2026-01-09 14:27:15] 2026-01-09 13:26:41,353 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:27:15] 2026-01-09 13:26:41,539 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:27:15] 2026-01-09 13:26:41,809 | INFO     | [payload] control thread has finished
[2026-01-09 14:27:15] 2026-01-09 13:26:41,812 | INFO     | [job] validate thread has finished
[2026-01-09 14:27:15] 2026-01-09 13:26:41,857 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:27:15] 2026-01-09 13:26:41,932 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:27:15] 2026-01-09 13:26:42,388 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:27:15] 2026-01-09 13:26:42,517 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:27:15] 2026-01-09 13:26:43,393 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:27:15] 2026-01-09 13:26:45,056 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:27:15] 2026-01-09 13:27:08,764 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:27:15] 2026-01-09 13:27:10,716 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139904780760896)>', '<ExcThread(monitor, started 139903660717824)>']
[2026-01-09 14:27:15] 2026-01-09 13:27:11,521 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:27:15] 2026-01-09 13:27:11,521 | INFO     | [monitor] control thread has ended
[2026-01-09 14:27:15] 2026-01-09 13:27:15,741 | INFO     | all workflow threads have been joined
[2026-01-09 14:27:15] 2026-01-09 13:27:15,742 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:27:15] 2026-01-09 13:27:15,742 | INFO     | traces error code: 0
[2026-01-09 14:27:15] 2026-01-09 13:27:15,742 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:27:15] 2026-01-09 13:27:15,798 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:27:15] 2026-01-09 13:27:15,799 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:27:15] 2026-01-09 13:27:15,800 [wrapper] pilotpid: 989776
[2026-01-09 14:27:15] 2026-01-09 13:27:15,801 [wrapper] Pilot exit status: 0
[2026-01-09 14:27:15] 2026-01-09 13:27:15,806 [wrapper] pandaids: 6963146803
[2026-01-09 14:27:15] 2026-01-09 13:27:15,816 [wrapper] cleanup supervisor_pilot 1017152 989777
[2026-01-09 14:27:15] 2026-01-09 13:27:15,818 [wrapper] Test setup, not cleaning
[2026-01-09 14:27:15] 2026-01-09 13:27:15,819 [wrapper] apfmon messages muted
[2026-01-09 14:27:15] 2026-01-09 13:27:15,820 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:27:15] 2026-01-09 13:27:15,821 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:27:15]  *** Error codes and diagnostics ***
[2026-01-09 14:27:15]     "exeErrorCode": 0,
[2026-01-09 14:27:15]     "exeErrorDiag": "",
[2026-01-09 14:27:15]     "pilotErrorCode": 0,
[2026-01-09 14:27:15]     "pilotErrorDiag": "",
[2026-01-09 14:27:15]  *** Listing of results directory ***
[2026-01-09 14:27:15] total 444920
[2026-01-09 14:27:15] -rw-r--r-- 1 boinc boinc    579449 Jan  8 16:02 pilot3.tar.gz
[2026-01-09 14:27:15] -rwx------ 1 boinc boinc     36322 Jan  8 16:03 runpilot2-wrapper.sh
[2026-01-09 14:27:15] -rw-r--r-- 1 boinc boinc      5112 Jan  8 16:04 queuedata.json
[2026-01-09 14:27:15] -rw-r--r-- 1 boinc boinc       100 Jan  9 11:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:27:15] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 11:19 run_atlas
[2026-01-09 14:27:15] -rw-r--r-- 1 boinc boinc       105 Jan  9 11:19 job.xml
[2026-01-09 14:27:15] -rw-r--r-- 2 boinc boinc     15847 Jan  9 11:19 start_atlas.sh
[2026-01-09 14:27:15] drwxrwx--x 2 boinc boinc        68 Jan  9 11:19 shared
[2026-01-09 14:27:15] -rw-r--r-- 2 boinc boinc    592398 Jan  9 11:19 input.tar.gz
[2026-01-09 14:27:15] -rw-r--r-- 1 boinc boinc      6312 Jan  9 11:19 init_data.xml
[2026-01-09 14:27:15] -rw-r--r-- 2 boinc boinc 223312506 Jan  9 11:19 EVNT.47898824._001070.pool.root.1
[2026-01-09 14:27:15] -rw-r--r-- 1 boinc boinc         0 Jan  9 11:19 boinc_lockfile
[2026-01-09 14:27:15] -rw-r--r-- 1 boinc boinc      2519 Jan  9 11:19 pandaJob.out
[2026-01-09 14:27:15] -rw------- 1 boinc boinc    989369 Jan  9 11:19 agis_schedconf.cvmfs.json
[2026-01-09 14:27:15] drwx------ 5 boinc boinc      4096 Jan  9 11:19 pilot3
[2026-01-09 14:27:15] -rw------- 1 boinc boinc        95 Jan  9 14:25 pilot_heartbeat.json
[2026-01-09 14:27:15] -rw------- 1 boinc boinc 224512090 Jan  9 14:26 HITS.47898826._027130.pool.root.1
[2026-01-09 14:27:15] -rw-r--r-- 1 boinc boinc       530 Jan  9 14:26 boinc_task_state.xml
[2026-01-09 14:27:15] -rw------- 1 boinc boinc      1029 Jan  9 14:26 memory_monitor_summary.json
[2026-01-09 14:27:15] -rw------- 1 boinc boinc   1516240 Jan  9 14:26 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:27:15] -rw------- 1 boinc boinc    349283 Jan  9 14:26 log.47898826._027130.job.log.tgz.1
[2026-01-09 14:27:15] -rw------- 1 boinc boinc      7768 Jan  9 14:26 heartbeat.json
[2026-01-09 14:27:15] -rw-r--r-- 1 boinc boinc      8192 Jan  9 14:26 boinc_mmap_file
[2026-01-09 14:27:15] -rw-r--r-- 1 boinc boinc        28 Jan  9 14:26 wrapper_checkpoint.txt
[2026-01-09 14:27:15] -rw------- 1 boinc boinc      4738 Jan  9 14:27 pilotlog.txt
[2026-01-09 14:27:15] -rw------- 1 boinc boinc   1586534 Jan  9 14:27 log.47898826._027130.job.log.1
[2026-01-09 14:27:15] -rw------- 1 boinc boinc       357 Jan  9 14:27 output.list
[2026-01-09 14:27:15] -rw-r--r-- 1 boinc boinc       620 Jan  9 14:27 runtime_log
[2026-01-09 14:27:15] -rw------- 1 boinc boinc   1955840 Jan  9 14:27 result.tar.gz
[2026-01-09 14:27:15] -rw------- 1 boinc boinc       653 Jan  9 14:27 YdMLDmRj6x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGVfKDmkKOXin.diag
[2026-01-09 14:27:15] -rw-r--r-- 1 boinc boinc      8831 Jan  9 14:27 runtime_log.err
[2026-01-09 14:27:15] -rw-r--r-- 1 boinc boinc     21084 Jan  9 14:27 stderr.txt
[2026-01-09 14:27:15] HITS file was successfully produced:
[2026-01-09 14:27:15] -rw------- 1 boinc boinc 224512090 Jan  9 14:26 shared/HITS.pool.root.1
[2026-01-09 14:27:15]  *** Contents of shared directory: ***
[2026-01-09 14:27:15] total 439840
[2026-01-09 14:27:15] -rw-r--r-- 2 boinc boinc     15847 Jan  9 11:19 start_atlas.sh
[2026-01-09 14:27:15] -rw-r--r-- 2 boinc boinc    592398 Jan  9 11:19 input.tar.gz
[2026-01-09 14:27:15] -rw-r--r-- 2 boinc boinc 223312506 Jan  9 11:19 ATLAS.root_0
[2026-01-09 14:27:15] -rw------- 1 boinc boinc 224512090 Jan  9 14:26 HITS.pool.root.1
[2026-01-09 14:27:15] -rw------- 1 boinc boinc   1955840 Jan  9 14:27 result.tar.gz
14:27:17 (986114): run_atlas exited; CPU time 43624.595406
14:27:17 (986114): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN