Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
00:00:21 (163495): wrapper (7.7.26015): starting
00:00:21 (163495): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 00:00:21] Arguments: --nthreads 4
[2026-01-09 00:00:21] Threads: 4
[2026-01-09 00:00:21] Checking for CVMFS
[2026-01-09 00:00:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 00:00:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 00:00:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 00:00:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 00:00:21] 2.12.7.0 5258 146 51016 154936 1 188 5086976 6144001 1846 130560 0 353669 99.999 4031 597 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-09 00:00:21] CVMFS is ok
[2026-01-09 00:00:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 00:00:21] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-09 00:00:21] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-09 00:00:21] Further information can be found at the LHC@home message board.
[2026-01-09 00:00:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 00:00:21] Checking for apptainer binary...
[2026-01-09 00:00:21] apptainer is not installed, using version from CVMFS
[2026-01-09 00:00:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 00:00:21] k8plus
[2026-01-09 00:00:21] apptainer works
[2026-01-09 00:00:21] Set ATHENA_PROC_NUMBER=4
[2026-01-09 00:00:21] Set ATHENA_CORE_NUMBER=4
[2026-01-09 00:00:21] Starting ATLAS job with PandaID=6963153269
[2026-01-09 00:00:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 02:13:50]  *** The last 200 lines of the pilot log: ***
[2026-01-09 02:13:50] 2026-01-09 10:13:08,603 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 02:13:50] 2026-01-09 10:13:09,785 | INFO     | time since job start (7958s) is within the limit (349056.0s)
[2026-01-09 02:13:50] 2026-01-09 10:13:10,411 | INFO     | monitor loop #602: job 0:6963153269 is in state 'finished'
[2026-01-09 02:13:50] 2026-01-09 10:13:10,411 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 02:13:50] 2026-01-09 10:13:11,790 | INFO     | time since job start (7960s) is within the limit (349056.0s)
[2026-01-09 02:13:50] 2026-01-09 10:13:12,914 | INFO     | monitor loop #603: job 0:6963153269 is in state 'finished'
[2026-01-09 02:13:50] 2026-01-09 10:13:12,914 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 02:13:50] 2026-01-09 10:13:13,795 | INFO     | time since job start (7962s) is within the limit (349056.0s)
[2026-01-09 02:13:50] 2026-01-09 10:13:15,266 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 02:13:50] 2026-01-09 10:13:15,268 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4013.7150625000004
[2026-01-09 02:13:50] 2026-01-09 10:13:15,270 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-6963153269/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 02:13:50] 2026-01-09 10:13:15,271 | INFO     | extracted standard info from prmon json
[2026-01-09 02:13:50] 2026-01-09 10:13:15,271 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 02:13:50] 2026-01-09 10:13:15,271 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 02:13:50] 2026-01-09 10:13:15,271 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 02:13:50] 2026-01-09 10:13:15,271 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 02:13:50] 2026-01-09 10:13:15,273 | INFO     | fitting pss+swap vs Time
[2026-01-09 02:13:50] 2026-01-09 10:13:15,273 | INFO     | sum of square deviations: 681212772.5
[2026-01-09 02:13:50] 2026-01-09 10:13:15,273 | INFO     | sum of deviations: 4249833582.9999986
[2026-01-09 02:13:50] 2026-01-09 10:13:15,273 | INFO     | mean x: 1767949588.5
[2026-01-09 02:13:50] 2026-01-09 10:13:15,273 | INFO     | mean y: 2349275.5846153847
[2026-01-09 02:13:50] 2026-01-09 10:13:15,273 | INFO     | intersect: -11027231844.399931
[2026-01-09 02:13:50] 2026-01-09 10:13:15,273 | INFO     | chi2: 1.1373179250824397
[2026-01-09 02:13:50] 2026-01-09 10:13:15,273 | INFO     | sum of square deviations: 605592750.0
[2026-01-09 02:13:50] 2026-01-09 10:13:15,274 | INFO     | sum of deviations: 3890567312.000001
[2026-01-09 02:13:50] 2026-01-09 10:13:15,274 | INFO     | mean x: 1767949436.0
[2026-01-09 02:13:50] 2026-01-09 10:13:15,274 | INFO     | mean y: 2348550.736
[2026-01-09 02:13:50] 2026-01-09 10:13:15,274 | INFO     | intersect: -11355657774.423008
[2026-01-09 02:13:50] 2026-01-09 10:13:15,274 | INFO     | chi2: 1.1377331593083193
[2026-01-09 02:13:50] 2026-01-09 10:13:15,274 | INFO     | current chi2=1.1377331593083193 (change=-0.036509951766524405 %)
[2026-01-09 02:13:50] 2026-01-09 10:13:15,274 | INFO     | right removable region: 124
[2026-01-09 02:13:50] 2026-01-09 10:13:15,274 | INFO     | sum of square deviations: 605592750.0
[2026-01-09 02:13:50] 2026-01-09 10:13:15,275 | INFO     | sum of deviations: -6482390943.999999
[2026-01-09 02:13:50] 2026-01-09 10:13:15,275 | INFO     | mean x: 1767949741.0
[2026-01-09 02:13:50] 2026-01-09 10:13:15,275 | INFO     | mean y: 2370263.504
[2026-01-09 02:13:50] 2026-01-09 10:13:15,275 | INFO     | intersect: 18926872563.945255
[2026-01-09 02:13:50] 2026-01-09 10:13:15,275 | INFO     | chi2: 0.05791053220468564
[2026-01-09 02:13:50] 2026-01-09 10:13:15,275 | INFO     | current chi2=0.05791053220468564 (change=94.90814917029573 %)
[2026-01-09 02:13:50] 2026-01-09 10:13:15,275 | INFO     | sum of square deviations: 535786790.0
[2026-01-09 02:13:50] 2026-01-09 10:13:15,275 | INFO     | sum of deviations: -3657920296.5000005
[2026-01-09 02:13:50] 2026-01-09 10:13:15,275 | INFO     | mean x: 1767949893.5
[2026-01-09 02:13:50] 2026-01-09 10:13:15,275 | INFO     | mean y: 2364078.341666667
[2026-01-09 02:13:50] 2026-01-09 10:13:15,275 | INFO     | intersect: 12072500780.720358
[2026-01-09 02:13:50] 2026-01-09 10:13:15,275 | INFO     | chi2: 0.046082858134802
[2026-01-09 02:13:50] 2026-01-09 10:13:15,276 | INFO     | current chi2=0.046082858134802 (change=20.424046575981286 %)
[2026-01-09 02:13:50] 2026-01-09 10:13:15,276 | INFO     | left removable region: 20
[2026-01-09 02:13:50] 2026-01-09 10:13:15,276 | INFO     | sum of square deviations: 348769330.0
[2026-01-09 02:13:50] 2026-01-09 10:13:15,276 | INFO     | sum of deviations: 1201071486.5
[2026-01-09 02:13:50] 2026-01-09 10:13:15,276 | INFO     | mean x: 1767950015.5
[2026-01-09 02:13:50] 2026-01-09 10:13:15,276 | INFO     | mean y: 2350532.528846154
[2026-01-09 02:13:50] 2026-01-09 10:13:15,276 | INFO     | intersect: -6086012664.929724
[2026-01-09 02:13:50] 2026-01-09 10:13:15,276 | INFO     | chi2: 0.00011502859199340162
[2026-01-09 02:13:50] 2026-01-09 10:13:15,276 | INFO     | current memory leak: 3.44 B/s (using 104 data points, chi2=0.00)
[2026-01-09 02:13:50] 2026-01-09 10:13:15,276 | INFO     | could have reported an average CPU frequency of 3916 MHz (8 samples)
[2026-01-09 02:13:50] 2026-01-09 10:13:15,276 | INFO     | ..............................
[2026-01-09 02:13:50] 2026-01-09 10:13:15,276 | INFO     | . Timing measurements:
[2026-01-09 02:13:50] 2026-01-09 10:13:15,277 | INFO     | . get job = 0 s
[2026-01-09 02:13:50] 2026-01-09 10:13:15,277 | INFO     | . initial setup = 3 s
[2026-01-09 02:13:50] 2026-01-09 10:13:15,277 | INFO     | . payload setup = 3 s
[2026-01-09 02:13:50] 2026-01-09 10:13:15,277 | INFO     | . stage-in = 0 s
[2026-01-09 02:13:50] 2026-01-09 10:13:15,277 | INFO     | . payload execution = 7931 s
[2026-01-09 02:13:50] 2026-01-09 10:13:15,277 | INFO     | . stage-out = 0 s
[2026-01-09 02:13:50] 2026-01-09 10:13:15,277 | INFO     | . log creation = 0 s
[2026-01-09 02:13:50] 2026-01-09 10:13:15,277 | INFO     | ..............................
[2026-01-09 02:13:50] 2026-01-09 10:13:15,333 | INFO     | 
[2026-01-09 02:13:50] 2026-01-09 10:13:15,333 | INFO     | job summary report
[2026-01-09 02:13:50] 2026-01-09 10:13:15,333 | INFO     | --------------------------------------------------
[2026-01-09 02:13:50] 2026-01-09 10:13:15,333 | INFO     | PanDA job id: 6963153269
[2026-01-09 02:13:50] 2026-01-09 10:13:15,333 | INFO     | task id: 47898826
[2026-01-09 02:13:50] 2026-01-09 10:13:15,333 | INFO     | errors: (none)
[2026-01-09 02:13:50] 2026-01-09 10:13:15,333 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 02:13:50] 2026-01-09 10:13:15,333 | INFO     | pilot state: finished 
[2026-01-09 02:13:50] 2026-01-09 10:13:15,333 | INFO     | transexitcode: 0
[2026-01-09 02:13:50] 2026-01-09 10:13:15,333 | INFO     | exeerrorcode: 0
[2026-01-09 02:13:50] 2026-01-09 10:13:15,333 | INFO     | exeerrordiag: 
[2026-01-09 02:13:50] 2026-01-09 10:13:15,333 | INFO     | exitcode: 0
[2026-01-09 02:13:50] 2026-01-09 10:13:15,333 | INFO     | exitmsg: OK
[2026-01-09 02:13:50] 2026-01-09 10:13:15,333 | INFO     | cpuconsumptiontime: 30711 s
[2026-01-09 02:13:50] 2026-01-09 10:13:15,333 | INFO     | nevents: 400
[2026-01-09 02:13:50] 2026-01-09 10:13:15,333 | INFO     | neventsw: 0
[2026-01-09 02:13:50] 2026-01-09 10:13:15,333 | INFO     | pid: 173990
[2026-01-09 02:13:50] 2026-01-09 10:13:15,333 | INFO     | pgrp: 173990
[2026-01-09 02:13:50] 2026-01-09 10:13:15,333 | INFO     | corecount: 4
[2026-01-09 02:13:50] 2026-01-09 10:13:15,333 | INFO     | event service: False
[2026-01-09 02:13:50] 2026-01-09 10:13:15,333 | INFO     | sizes: {0: 2283807, 1: 2284006, 4: 2284268, 11: 2284296, 7939: 2312167, 7940: 2321363, 7950: 2321501}
[2026-01-09 02:13:50] 2026-01-09 10:13:15,333 | INFO     | --------------------------------------------------
[2026-01-09 02:13:50] 2026-01-09 10:13:15,333 | INFO     | 
[2026-01-09 02:13:50] 2026-01-09 10:13:15,333 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2026-01-09 02:13:50] 2026-01-09 10:13:15,347 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 02:13:50] 2026-01-09 10:13:15,347 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 02:13:50] 2026-01-09 10:13:15,347 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 02:13:50] 2026-01-09 10:13:15,347 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 02:13:50] 2026-01-09 10:13:15,347 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 02:13:50] 2026-01-09 10:13:15,347 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 02:13:50] 2026-01-09 10:13:15,347 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 02:13:50] 2026-01-09 10:13:15,347 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 02:13:50] 2026-01-09 10:13:15,347 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 02:13:50] 2026-01-09 10:13:15,347 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 02:13:50] 2026-01-09 10:13:15,347 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 02:13:50] 2026-01-09 10:13:15,347 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 02:13:50] 2026-01-09 10:13:15,347 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 02:13:50] 2026-01-09 10:13:15,347 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 02:13:50] 2026-01-09 10:13:15,347 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 02:13:50] 2026-01-09 10:13:15,347 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 02:13:50] 2026-01-09 10:13:15,347 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 02:13:50] 2026-01-09 10:13:15,347 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 02:13:50] 2026-01-09 10:13:15,347 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 02:13:50] 2026-01-09 10:13:15,347 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 02:13:50] 2026-01-09 10:13:15,348 | INFO     | job 6963153269 has completed (purged errors)
[2026-01-09 02:13:50] 2026-01-09 10:13:15,348 | INFO     | overall cleanup function is called
[2026-01-09 02:13:50] 2026-01-09 10:13:16,355 | INFO     | --- collectZombieJob: --- 10, [173990]
[2026-01-09 02:13:50] 2026-01-09 10:13:16,355 | INFO     | zombie collector waiting for pid 173990
[2026-01-09 02:13:50] 2026-01-09 10:13:16,355 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 02:13:50] 2026-01-09 10:13:16,355 | INFO     | collected zombie processes
[2026-01-09 02:13:50] 2026-01-09 10:13:16,355 | INFO     | will attempt to kill all subprocesses of pid=173990
[2026-01-09 02:13:50] 2026-01-09 10:13:16,433 | INFO     | process IDs to be killed: [173990] (in reverse order)
[2026-01-09 02:13:50] 2026-01-09 10:13:16,475 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 02:13:50] 2026-01-09 10:13:16,475 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 02:13:50] 2026-01-09 10:13:16,478 | INFO     | did not find any defunct processes belonging to 173990
[2026-01-09 02:13:50] 2026-01-09 10:13:16,480 | INFO     | did not find any defunct processes belonging to 173990
[2026-01-09 02:13:50] 2026-01-09 10:13:16,481 | INFO     | ready for new job
[2026-01-09 02:13:50] 2026-01-09 10:13:16,481 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 02:13:50] 2026-01-09 10:13:16,482 | INFO     | ***************************************
[2026-01-09 02:13:50] 2026-01-09 10:13:16,482 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 02:13:50] 2026-01-09 10:13:16,482 | INFO     | ***************************************
[2026-01-09 02:13:50] 2026-01-09 10:13:16,482 | INFO     | 
[2026-01-09 02:13:50] 2026-01-09 10:13:16,483 | INFO     | architecture information:
[2026-01-09 02:13:50] 2026-01-09 10:13:16,483 | INFO     | executing command: cat /etc/os-release
[2026-01-09 02:13:50] 2026-01-09 10:13:16,494 | INFO     | cat /etc/os-release:
[2026-01-09 02:13:50] NAME="CentOS Linux"
[2026-01-09 02:13:50] VERSION="7 (Core)"
[2026-01-09 02:13:50] ID="centos"
[2026-01-09 02:13:50] ID_LIKE="rhel fedora"
[2026-01-09 02:13:50] VERSION_ID="7"
[2026-01-09 02:13:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 02:13:50] ANSI_COLOR="0;31"
[2026-01-09 02:13:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 02:13:50] HOME_URL="https://www.centos.org/"
[2026-01-09 02:13:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 02:13:50] 
[2026-01-09 02:13:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 02:13:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 02:13:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 02:13:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 02:13:50] 
[2026-01-09 02:13:50] 2026-01-09 10:13:16,494 | INFO     | ***************************************
[2026-01-09 02:13:50] 2026-01-09 10:13:16,995 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2026-01-09 02:13:50] 2026-01-09 10:13:17,009 | INFO     | sufficient remaining disk space (115503792128 B)
[2026-01-09 02:13:50] 2026-01-09 10:13:17,009 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 02:13:50] 2026-01-09 10:13:17,010 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 02:13:50] 2026-01-09 10:13:17,010 | INFO     | update_server=False
[2026-01-09 02:13:50] 2026-01-09 10:13:17,010 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 02:13:50] 2026-01-09 10:13:17,010 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:13:50] 2026-01-09 10:13:17,010 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 02:13:50] 2026-01-09 10:13:17,011 | INFO     | aborting loop
[2026-01-09 02:13:50] 2026-01-09 10:13:17,010 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 02:13:50] 2026-01-09 10:13:17,479 | INFO     | all data control threads have been joined
[2026-01-09 02:13:50] 2026-01-09 10:13:17,749 | INFO     | all job control threads have been joined
[2026-01-09 02:13:50] 2026-01-09 10:13:17,897 | INFO     | all payload control threads have been joined
[2026-01-09 02:13:50] 2026-01-09 10:13:18,011 | INFO     | [job] job monitor thread has finished
[2026-01-09 02:13:50] 2026-01-09 10:13:18,015 | INFO     | [job] retrieve thread has finished
[2026-01-09 02:13:50] 2026-01-09 10:13:18,016 | INFO     | [job] queue monitor thread has finished
[2026-01-09 02:13:50] 2026-01-09 10:13:18,073 | INFO     | [payload] validate_post thread has finished
[2026-01-09 02:13:50] 2026-01-09 10:13:18,178 | INFO     | [payload] failed_post thread has finished
[2026-01-09 02:13:50] 2026-01-09 10:13:18,292 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 02:13:50] 2026-01-09 10:13:18,485 | INFO     | [data] control thread has finished
[2026-01-09 02:13:50] 2026-01-09 10:13:18,712 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 02:13:50] 2026-01-09 10:13:18,754 | INFO     | [job] control thread has finished
[2026-01-09 02:13:50] 2026-01-09 10:13:18,902 | INFO     | [payload] control thread has finished
[2026-01-09 02:13:50] 2026-01-09 10:13:18,925 | INFO     | [job] validate thread has finished
[2026-01-09 02:13:50] 2026-01-09 10:13:18,973 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 02:13:50] 2026-01-09 10:13:19,075 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 02:13:50] 2026-01-09 10:13:19,122 | INFO     | [data] copytool_in thread has finished
[2026-01-09 02:13:50] 2026-01-09 10:13:20,297 | INFO     | [data] copytool_out thread has finished
[2026-01-09 02:13:50] 2026-01-09 10:13:21,017 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 02:13:50] 2026-01-09 10:13:27,631 | INFO     | job.realtimelogging is not enabled
[2026-01-09 02:13:50] 2026-01-09 10:13:28,636 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 02:13:50] 2026-01-09 10:13:44,586 | INFO     | [monitor] cgroup control has ended
[2026-01-09 02:13:50] 2026-01-09 10:13:44,988 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134951463909184)>', '<ExcThread(monitor, started 134951060092672)>']
[2026-01-09 02:13:50] 2026-01-09 10:13:46,955 | INFO     | PID=167385 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 02:13:50] 2026-01-09 10:13:46,955 | INFO     | .. there are 3 such processes running
[2026-01-09 02:13:50] 2026-01-09 10:13:46,956 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 02:13:50] 2026-01-09 10:13:46,956 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 02:13:50] 2026-01-09 10:13:46,956 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 02:13:50] 2026-01-09 10:13:46,956 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 02:13:50] 2026-01-09 10:13:46,956 | INFO     | [monitor] control thread has ended
[2026-01-09 02:13:50] 2026-01-09 10:13:50,013 | INFO     | all workflow threads have been joined
[2026-01-09 02:13:50] 2026-01-09 10:13:50,013 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 02:13:50] 2026-01-09 10:13:50,013 | INFO     | traces error code: 0
[2026-01-09 02:13:50] 2026-01-09 10:13:50,013 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 02:13:50] 2026-01-09 10:13:50,089 [wrapper] ==== pilot stdout END ====
[2026-01-09 02:13:50] 2026-01-09 10:13:50,091 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 02:13:50] 2026-01-09 10:13:50,093 [wrapper] pilotpid: 167385
[2026-01-09 02:13:50] 2026-01-09 10:13:50,094 [wrapper] Pilot exit status: 0
[2026-01-09 02:13:50] 2026-01-09 10:13:50,099 [wrapper] pandaids: 6963153269
[2026-01-09 02:13:50] 2026-01-09 10:13:50,122 [wrapper] cleanup supervisor_pilot  270607 167386
[2026-01-09 02:13:50] 2026-01-09 10:13:50,124 [wrapper] Test setup, not cleaning
[2026-01-09 02:13:50] 2026-01-09 10:13:50,126 [wrapper] apfmon messages muted
[2026-01-09 02:13:50] 2026-01-09 10:13:50,127 [wrapper] ==== wrapper stdout END ====
[2026-01-09 02:13:50] 2026-01-09 10:13:50,129 [wrapper] ==== wrapper stderr END ====
[2026-01-09 02:13:50]  *** Error codes and diagnostics ***
[2026-01-09 02:13:50]     "exeErrorCode": 0,
[2026-01-09 02:13:50]     "exeErrorDiag": "",
[2026-01-09 02:13:50]     "pilotErrorCode": 0,
[2026-01-09 02:13:50]     "pilotErrorDiag": "",
[2026-01-09 02:13:50]  *** Listing of results directory ***
[2026-01-09 02:13:50] total 442108
[2026-01-09 02:13:50] -rw-r--r-- 1 boinc boinc    579449 Jan  8 11:06 pilot3.tar.gz
[2026-01-09 02:13:50] -rwx------ 1 boinc boinc     36322 Jan  8 11:09 runpilot2-wrapper.sh
[2026-01-09 02:13:50] -rw-r--r-- 1 boinc boinc      5112 Jan  8 11:11 queuedata.json
[2026-01-09 02:13:50] -rw-r--r-- 1 boinc boinc       100 Jan  9 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 02:13:50] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 00:00 run_atlas
[2026-01-09 02:13:50] -rw-r--r-- 1 boinc boinc       105 Jan  9 00:00 job.xml
[2026-01-09 02:13:50] -rw-r--r-- 2 boinc boinc 222919302 Jan  9 00:00 EVNT.47898824._001159.pool.root.1
[2026-01-09 02:13:50] drwxrwx--x 2 boinc boinc      4096 Jan  9 00:00 shared
[2026-01-09 02:13:50] -rw-r--r-- 2 boinc boinc    592396 Jan  9 00:00 input.tar.gz
[2026-01-09 02:13:50] -rw-r--r-- 1 boinc boinc         0 Jan  9 00:00 boinc_setup_complete
[2026-01-09 02:13:50] -rw-r--r-- 2 boinc boinc     15847 Jan  9 00:00 start_atlas.sh
[2026-01-09 02:13:50] -rw-r--r-- 1 boinc boinc      7245 Jan  9 00:00 init_data.xml
[2026-01-09 02:13:50] -rw-r--r-- 1 boinc boinc         0 Jan  9 00:00 boinc_lockfile
[2026-01-09 02:13:50] -rw-r--r-- 1 boinc boinc      2520 Jan  9 00:00 pandaJob.out
[2026-01-09 02:13:50] -rw------- 1 boinc boinc    989771 Jan  9 00:00 agis_schedconf.cvmfs.json
[2026-01-09 02:13:50] -rw------- 1 boinc boinc   1516240 Jan  9 00:00 agis_ddmendpoints.agis.ALL.json
[2026-01-09 02:13:50] drwx------ 5 boinc boinc      4096 Jan  9 00:00 pilot3
[2026-01-09 02:13:50] -rw------- 1 boinc boinc 222912725 Jan  9 02:12 HITS.47898826._029964.pool.root.1
[2026-01-09 02:13:50] -rw------- 1 boinc boinc      1023 Jan  9 02:13 memory_monitor_summary.json
[2026-01-09 02:13:50] -rw------- 1 boinc boinc    315979 Jan  9 02:13 log.47898826._029964.job.log.tgz.1
[2026-01-09 02:13:50] -rw-r--r-- 1 boinc boinc       529 Jan  9 02:13 boinc_task_state.xml
[2026-01-09 02:13:50] -rw------- 1 boinc boinc      7762 Jan  9 02:13 heartbeat.json
[2026-01-09 02:13:50] -rw-r--r-- 1 boinc boinc      8192 Jan  9 02:13 boinc_mmap_file
[2026-01-09 02:13:50] -rw-r--r-- 1 boinc boinc        27 Jan  9 02:13 wrapper_checkpoint.txt
[2026-01-09 02:13:50] -rw------- 1 boinc boinc        95 Jan  9 02:13 pilot_heartbeat.json
[2026-01-09 02:13:50] -rw------- 1 boinc boinc      4902 Jan  9 02:13 pilotlog.txt
[2026-01-09 02:13:50] -rw------- 1 boinc boinc   1167206 Jan  9 02:13 log.47898826._029964.job.log.1
[2026-01-09 02:13:50] -rw------- 1 boinc boinc       357 Jan  9 02:13 output.list
[2026-01-09 02:13:50] -rw------- 1 boinc boinc   1505280 Jan  9 02:13 result.tar.gz
[2026-01-09 02:13:50] -rw-r--r-- 1 boinc boinc       620 Jan  9 02:13 runtime_log
[2026-01-09 02:13:50] -rw-r--r-- 1 boinc boinc      8908 Jan  9 02:13 runtime_log.err
[2026-01-09 02:13:50] -rw------- 1 boinc boinc       649 Jan  9 02:13 xf1NDmAZAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhGlKDmIBC5Dn.diag
[2026-01-09 02:13:50] -rw-r--r-- 1 boinc boinc     21455 Jan  9 02:13 stderr.txt
[2026-01-09 02:13:50] HITS file was successfully produced:
[2026-01-09 02:13:50] -rw------- 1 boinc boinc 222912725 Jan  9 02:12 shared/HITS.pool.root.1
[2026-01-09 02:13:50]  *** Contents of shared directory: ***
[2026-01-09 02:13:50] total 437464
[2026-01-09 02:13:50] -rw-r--r-- 2 boinc boinc 222919302 Jan  9 00:00 ATLAS.root_0
[2026-01-09 02:13:50] -rw-r--r-- 2 boinc boinc    592396 Jan  9 00:00 input.tar.gz
[2026-01-09 02:13:50] -rw-r--r-- 2 boinc boinc     15847 Jan  9 00:00 start_atlas.sh
[2026-01-09 02:13:50] -rw------- 1 boinc boinc 222912725 Jan  9 02:12 HITS.pool.root.1
[2026-01-09 02:13:50] -rw------- 1 boinc boinc   1505280 Jan  9 02:13 result.tar.gz
02:13:52 (163495): run_atlas exited; CPU time 30776.888988
02:13:52 (163495): called boinc_finish(0)

</stderr_txt>
]]>

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