Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:17:29 (17403): wrapper (7.7.26015): starting
11:17:29 (17403): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 11:17:29] Arguments: --nthreads 8
[2026-01-09 11:17:29] Threads: 8
[2026-01-09 11:17:29] Checking for CVMFS
[2026-01-09 11:17:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 11:17:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 11:17:30] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 11:17:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 11:17:30] 2.11.2.0 25933 35267 120676 154940 1 56 13736702 25165825 0 130560 0 14968455 99.824 10054079 3616 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 11:17:30] CVMFS is ok
[2026-01-09 11:17:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 11:17:30] Checking for apptainer binary...
[2026-01-09 11:17:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 11:17:30] Running /usr/bin/apptainer --version
[2026-01-09 11:17:30] apptainer version 1.3.2-1.el7
[2026-01-09 11:17:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 11:17:31] cg-vwn397.simple-grid.lan
[2026-01-09 11:17:31] apptainer works
[2026-01-09 11:17:31] Set ATHENA_PROC_NUMBER=8
[2026-01-09 11:17:31] Set ATHENA_CORE_NUMBER=8
[2026-01-09 11:17:31] Starting ATLAS job with PandaID=6963187069
[2026-01-09 11:17:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 13:52:11]  *** The last 200 lines of the pilot log: ***
[2026-01-09 13:52:11] 2026-01-09 12:51:33,220 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 13:52:11] 2026-01-09 12:51:33,701 | INFO     | monitor loop #629: job 0:6963187069 is in state 'finished'
[2026-01-09 13:52:11] 2026-01-09 12:51:33,701 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 13:52:11] 2026-01-09 12:51:34,341 | INFO     | time since job start (9228s) is within the limit (349056.0s)
[2026-01-09 13:52:11] 2026-01-09 12:51:36,205 | INFO     | monitor loop #630: job 0:6963187069 is in state 'finished'
[2026-01-09 13:52:11] 2026-01-09 12:51:36,205 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 13:52:11] 2026-01-09 12:51:36,347 | INFO     | time since job start (9230s) is within the limit (349056.0s)
[2026-01-09 13:52:11] 2026-01-09 12:51:38,353 | INFO     | time since job start (9232s) is within the limit (349056.0s)
[2026-01-09 13:52:11] 2026-01-09 12:51:38,565 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 13:52:11] 2026-01-09 12:51:38,566 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 13:52:11] 2026-01-09 12:51:38,568 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6963187069/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 13:52:11] 2026-01-09 12:51:38,569 | INFO     | extracted standard info from prmon json
[2026-01-09 13:52:11] 2026-01-09 12:51:38,569 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 13:52:11] 2026-01-09 12:51:38,569 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 13:52:11] 2026-01-09 12:51:38,570 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 13:52:11] 2026-01-09 12:51:38,570 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 13:52:11] 2026-01-09 12:51:38,573 | INFO     | fitting pss+swap vs Time
[2026-01-09 13:52:11] 2026-01-09 12:51:38,574 | INFO     | sum of square deviations: 1067554900.0
[2026-01-09 13:52:11] 2026-01-09 12:51:38,575 | INFO     | sum of deviations: -7876319572.999998
[2026-01-09 13:52:11] 2026-01-09 12:51:38,575 | INFO     | mean x: 1767958471.0
[2026-01-09 13:52:11] 2026-01-09 12:51:38,575 | INFO     | mean y: 2554592.284768212
[2026-01-09 13:52:11] 2026-01-09 12:51:38,575 | INFO     | intersect: 13046385789.526663
[2026-01-09 13:52:11] 2026-01-09 12:51:38,576 | INFO     | chi2: 1.7133991439789993
[2026-01-09 13:52:11] 2026-01-09 12:51:38,576 | INFO     | sum of square deviations: 964976232.5
[2026-01-09 13:52:11] 2026-01-09 12:51:38,577 | INFO     | sum of deviations: -7010268748.500001
[2026-01-09 13:52:11] 2026-01-09 12:51:38,577 | INFO     | mean x: 1767958318.5
[2026-01-09 13:52:11] 2026-01-09 12:51:38,577 | INFO     | mean y: 2555880.3630136987
[2026-01-09 13:52:11] 2026-01-09 12:51:38,577 | INFO     | intersect: 12846253508.771868
[2026-01-09 13:52:11] 2026-01-09 12:51:38,578 | INFO     | chi2: 1.713781228706851
[2026-01-09 13:52:11] 2026-01-09 12:51:38,578 | INFO     | current chi2=1.713781228706851 (change=-0.02229980849438379 %)
[2026-01-09 13:52:11] 2026-01-09 12:51:38,578 | INFO     | right removable region: 145
[2026-01-09 13:52:11] 2026-01-09 12:51:38,578 | INFO     | sum of square deviations: 964976232.5
[2026-01-09 13:52:11] 2026-01-09 12:51:38,579 | INFO     | sum of deviations: -31744188390.999992
[2026-01-09 13:52:11] 2026-01-09 12:51:38,579 | INFO     | mean x: 1767958623.5
[2026-01-09 13:52:11] 2026-01-09 12:51:38,579 | INFO     | mean y: 2589553.520547945
[2026-01-09 13:52:11] 2026-01-09 12:51:38,579 | INFO     | intersect: 58161961485.90337
[2026-01-09 13:52:11] 2026-01-09 12:51:38,580 | INFO     | chi2: 0.16604884906761347
[2026-01-09 13:52:11] 2026-01-09 12:51:38,580 | INFO     | current chi2=0.16604884906761347 (change=90.30880518114414 %)
[2026-01-09 13:52:11] 2026-01-09 12:51:38,580 | INFO     | sum of square deviations: 869188390.0
[2026-01-09 13:52:11] 2026-01-09 12:51:38,581 | INFO     | sum of deviations: -31658887882.00001
[2026-01-09 13:52:11] 2026-01-09 12:51:38,581 | INFO     | mean x: 1767958776.0
[2026-01-09 13:52:11] 2026-01-09 12:51:38,581 | INFO     | mean y: 2589327.361702128
[2026-01-09 13:52:11] 2026-01-09 12:51:38,581 | INFO     | intersect: 64397845077.82331
[2026-01-09 13:52:11] 2026-01-09 12:51:38,582 | INFO     | chi2: 0.13737183944313563
[2026-01-09 13:52:11] 2026-01-09 12:51:38,582 | INFO     | current chi2=0.13737183944313563 (change=17.270224867864535 %)
[2026-01-09 13:52:11] 2026-01-09 12:51:38,582 | INFO     | left removable region: 20
[2026-01-09 13:52:11] 2026-01-09 12:51:38,582 | INFO     | sum of square deviations: 605592750.0
[2026-01-09 13:52:11] 2026-01-09 12:51:38,583 | INFO     | sum of deviations: -22669927759.999992
[2026-01-09 13:52:11] 2026-01-09 12:51:38,583 | INFO     | mean x: 1767958898.0
[2026-01-09 13:52:11] 2026-01-09 12:51:38,583 | INFO     | mean y: 2578653.424
[2026-01-09 13:52:11] 2026-01-09 12:51:38,583 | INFO     | intersect: 66184844706.492165
[2026-01-09 13:52:11] 2026-01-09 12:51:38,584 | INFO     | chi2: 0.12921482707906382
[2026-01-09 13:52:11] 2026-01-09 12:51:38,584 | INFO     | current memory leak: -37.43 B/s (using 125 data points, chi2=0.13)
[2026-01-09 13:52:11] 2026-01-09 12:51:38,584 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-01-09 13:52:11] 2026-01-09 12:51:38,585 | INFO     | ..............................
[2026-01-09 13:52:11] 2026-01-09 12:51:38,585 | INFO     | . Timing measurements:
[2026-01-09 13:52:11] 2026-01-09 12:51:38,585 | INFO     | . get job = 0 s
[2026-01-09 13:52:11] 2026-01-09 12:51:38,585 | INFO     | . initial setup = 2 s
[2026-01-09 13:52:11] 2026-01-09 12:51:38,585 | INFO     | . payload setup = 6 s
[2026-01-09 13:52:11] 2026-01-09 12:51:38,585 | INFO     | . stage-in = 0 s
[2026-01-09 13:52:11] 2026-01-09 12:51:38,585 | INFO     | . payload execution = 9195 s
[2026-01-09 13:52:11] 2026-01-09 12:51:38,585 | INFO     | . stage-out = 0 s
[2026-01-09 13:52:11] 2026-01-09 12:51:38,585 | INFO     | . log creation = 0 s
[2026-01-09 13:52:11] 2026-01-09 12:51:38,586 | INFO     | ..............................
[2026-01-09 13:52:11] 2026-01-09 12:51:38,919 | INFO     | 
[2026-01-09 13:52:11] 2026-01-09 12:51:38,919 | INFO     | job summary report
[2026-01-09 13:52:11] 2026-01-09 12:51:38,919 | INFO     | --------------------------------------------------
[2026-01-09 13:52:11] 2026-01-09 12:51:38,919 | INFO     | PanDA job id: 6963187069
[2026-01-09 13:52:11] 2026-01-09 12:51:38,919 | INFO     | task id: 47898826
[2026-01-09 13:52:11] 2026-01-09 12:51:38,919 | INFO     | errors: (none)
[2026-01-09 13:52:11] 2026-01-09 12:51:38,920 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 13:52:11] 2026-01-09 12:51:38,920 | INFO     | pilot state: finished 
[2026-01-09 13:52:11] 2026-01-09 12:51:38,920 | INFO     | transexitcode: 0
[2026-01-09 13:52:11] 2026-01-09 12:51:38,920 | INFO     | exeerrorcode: 0
[2026-01-09 13:52:11] 2026-01-09 12:51:38,920 | INFO     | exeerrordiag: 
[2026-01-09 13:52:11] 2026-01-09 12:51:38,920 | INFO     | exitcode: 0
[2026-01-09 13:52:11] 2026-01-09 12:51:38,920 | INFO     | exitmsg: OK
[2026-01-09 13:52:11] 2026-01-09 12:51:38,920 | INFO     | cpuconsumptiontime: 69351 s
[2026-01-09 13:52:11] 2026-01-09 12:51:38,920 | INFO     | nevents: 400
[2026-01-09 13:52:11] 2026-01-09 12:51:38,920 | INFO     | neventsw: 0
[2026-01-09 13:52:11] 2026-01-09 12:51:38,920 | INFO     | pid: 27610
[2026-01-09 13:52:11] 2026-01-09 12:51:38,921 | INFO     | pgrp: 27610
[2026-01-09 13:52:11] 2026-01-09 12:51:38,921 | INFO     | corecount: 8
[2026-01-09 13:52:11] 2026-01-09 12:51:38,921 | INFO     | event service: False
[2026-01-09 13:52:11] 2026-01-09 12:51:38,921 | INFO     | sizes: {0: 2283799, 1: 2283998, 5: 2284260, 11: 2284316, 9205: 2312223, 9206: 2321221, 9210: 2321405, 9216: 2321599}
[2026-01-09 13:52:11] 2026-01-09 12:51:38,921 | INFO     | --------------------------------------------------
[2026-01-09 13:52:11] 2026-01-09 12:51:38,921 | INFO     | 
[2026-01-09 13:52:11] 2026-01-09 12:51:38,921 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-09 13:52:11] 2026-01-09 12:51:38,944 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 13:52:11] 2026-01-09 12:51:38,944 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 13:52:11] 2026-01-09 12:51:38,944 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 13:52:11] 2026-01-09 12:51:38,944 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 13:52:11] 2026-01-09 12:51:38,944 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 13:52:11] 2026-01-09 12:51:38,945 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 13:52:11] 2026-01-09 12:51:38,945 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 13:52:11] 2026-01-09 12:51:38,945 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 13:52:11] 2026-01-09 12:51:38,945 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 13:52:11] 2026-01-09 12:51:38,945 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 13:52:11] 2026-01-09 12:51:38,945 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 13:52:11] 2026-01-09 12:51:38,945 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 13:52:11] 2026-01-09 12:51:38,945 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 13:52:11] 2026-01-09 12:51:38,945 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 13:52:11] 2026-01-09 12:51:38,946 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 13:52:11] 2026-01-09 12:51:38,946 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 13:52:11] 2026-01-09 12:51:38,946 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 13:52:11] 2026-01-09 12:51:38,946 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 13:52:11] 2026-01-09 12:51:38,946 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 13:52:11] 2026-01-09 12:51:38,946 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 13:52:11] 2026-01-09 12:51:38,946 | INFO     | job 6963187069 has completed (purged errors)
[2026-01-09 13:52:11] 2026-01-09 12:51:38,946 | INFO     | overall cleanup function is called
[2026-01-09 13:52:11] 2026-01-09 12:51:39,954 | INFO     | --- collectZombieJob: --- 10, [27610]
[2026-01-09 13:52:11] 2026-01-09 12:51:39,955 | INFO     | zombie collector waiting for pid 27610
[2026-01-09 13:52:11] 2026-01-09 12:51:39,955 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 13:52:11] 2026-01-09 12:51:39,955 | INFO     | collected zombie processes
[2026-01-09 13:52:11] 2026-01-09 12:51:39,955 | INFO     | will attempt to kill all subprocesses of pid=27610
[2026-01-09 13:52:11] 2026-01-09 12:51:40,018 | INFO     | process IDs to be killed: [27610] (in reverse order)
[2026-01-09 13:52:11] 2026-01-09 12:51:40,060 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 13:52:11] 2026-01-09 12:51:40,060 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 13:52:11] 2026-01-09 12:51:40,062 | INFO     | did not find any defunct processes belonging to 27610
[2026-01-09 13:52:11] 2026-01-09 12:51:40,064 | INFO     | did not find any defunct processes belonging to 27610
[2026-01-09 13:52:11] 2026-01-09 12:51:40,064 | INFO     | ready for new job
[2026-01-09 13:52:11] 2026-01-09 12:51:40,064 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 13:52:11] 2026-01-09 12:51:40,066 | INFO     | ***************************************
[2026-01-09 13:52:11] 2026-01-09 12:51:40,066 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 13:52:11] 2026-01-09 12:51:40,066 | INFO     | ***************************************
[2026-01-09 13:52:11] 2026-01-09 12:51:40,066 | INFO     | 
[2026-01-09 13:52:11] 2026-01-09 12:51:40,066 | INFO     | pilot is running in a VM
[2026-01-09 13:52:11] 2026-01-09 12:51:40,067 | INFO     | architecture information:
[2026-01-09 13:52:11] 2026-01-09 12:51:40,067 | INFO     | executing command: cat /etc/os-release
[2026-01-09 13:52:11] 2026-01-09 12:51:40,084 | INFO     | cat /etc/os-release:
[2026-01-09 13:52:11] NAME="CentOS Linux"
[2026-01-09 13:52:11] VERSION="7 (Core)"
[2026-01-09 13:52:11] ID="centos"
[2026-01-09 13:52:11] ID_LIKE="rhel fedora"
[2026-01-09 13:52:11] VERSION_ID="7"
[2026-01-09 13:52:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 13:52:11] ANSI_COLOR="0;31"
[2026-01-09 13:52:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 13:52:11] HOME_URL="https://www.centos.org/"
[2026-01-09 13:52:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 13:52:11] 
[2026-01-09 13:52:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 13:52:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 13:52:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 13:52:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 13:52:11] 
[2026-01-09 13:52:11] 2026-01-09 12:51:40,084 | INFO     | ***************************************
[2026-01-09 13:52:11] 2026-01-09 12:51:40,587 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-09 13:52:11] 2026-01-09 12:51:40,605 | INFO     | sufficient remaining disk space (497886953472 B)
[2026-01-09 13:52:11] 2026-01-09 12:51:40,606 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 13:52:11] 2026-01-09 12:51:40,606 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 13:52:11] 2026-01-09 12:51:40,606 | INFO     | update_server=False
[2026-01-09 13:52:11] 2026-01-09 12:51:40,606 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 13:52:11] 2026-01-09 12:51:40,607 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:52:11] 2026-01-09 12:51:40,607 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:52:11] 2026-01-09 12:51:40,607 | INFO     | aborting loop
[2026-01-09 13:52:11] 2026-01-09 12:51:40,967 | INFO     | all data control threads have been joined
[2026-01-09 13:52:11] 2026-01-09 12:51:41,612 | INFO     | [job] retrieve thread has finished
[2026-01-09 13:52:11] 2026-01-09 12:51:41,612 | INFO     | [job] queue monitor thread has finished
[2026-01-09 13:52:11] 2026-01-09 12:51:41,613 | INFO     | [job] job monitor thread has finished
[2026-01-09 13:52:11] 2026-01-09 12:51:41,626 | INFO     | [payload] validate_post thread has finished
[2026-01-09 13:52:11] 2026-01-09 12:51:41,787 | INFO     | all payload control threads have been joined
[2026-01-09 13:52:11] 2026-01-09 12:51:41,858 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 13:52:11] 2026-01-09 12:51:41,864 | INFO     | [data] copytool_in thread has finished
[2026-01-09 13:52:11] 2026-01-09 12:51:41,973 | INFO     | [data] control thread has finished
[2026-01-09 13:52:11] 2026-01-09 12:51:42,076 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 13:52:11] 2026-01-09 12:51:42,216 | INFO     | all job control threads have been joined
[2026-01-09 13:52:11] 2026-01-09 12:51:42,217 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 13:52:11] 2026-01-09 12:51:42,605 | INFO     | [job] validate thread has finished
[2026-01-09 13:52:11] 2026-01-09 12:51:42,644 | INFO     | [payload] failed_post thread has finished
[2026-01-09 13:52:11] 2026-01-09 12:51:42,793 | INFO     | [payload] control thread has finished
[2026-01-09 13:52:11] 2026-01-09 12:51:42,825 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 13:52:11] 2026-01-09 12:51:42,831 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 13:52:11] 2026-01-09 12:51:42,839 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 13:52:11] 2026-01-09 12:51:43,222 | INFO     | [job] control thread has finished
[2026-01-09 13:52:11] 2026-01-09 12:51:43,864 | INFO     | [data] copytool_out thread has finished
[2026-01-09 13:52:11] 2026-01-09 12:51:46,832 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 13:52:11] 2026-01-09 12:52:01,212 | INFO     | [monitor] cgroup control has ended
[2026-01-09 13:52:11] 2026-01-09 12:52:01,854 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140671490942784)>', '<ExcThread(monitor, started 140671263954688)>']
[2026-01-09 13:52:11] 2026-01-09 12:52:06,880 | INFO     | all workflow threads have been joined
[2026-01-09 13:52:11] 2026-01-09 12:52:06,880 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 13:52:11] 2026-01-09 12:52:06,881 | INFO     | traces error code: 0
[2026-01-09 13:52:11] 2026-01-09 12:52:06,881 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 13:52:11] 2026-01-09 12:52:10,356 | INFO     | 9236s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-09 13:52:11] 2026-01-09 12:52:11,437 | INFO     | PID=21143 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 13:52:11] 2026-01-09 12:52:11,437 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 13:52:11] 2026-01-09 12:52:11,437 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 13:52:11] 2026-01-09 12:52:11,437 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 13:52:11] 2026-01-09 12:52:11,437 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 13:52:11] 2026-01-09 12:52:11,437 | INFO     | [monitor] control thread has ended
[2026-01-09 13:52:11] 2026-01-09 12:52:11,585 [wrapper] ==== pilot stdout END ====
[2026-01-09 13:52:11] 2026-01-09 12:52:11,589 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 13:52:11] 2026-01-09 12:52:11,593 [wrapper] pilotpid: 21143
[2026-01-09 13:52:11] 2026-01-09 12:52:11,596 [wrapper] Pilot exit status: 0
[2026-01-09 13:52:11] 2026-01-09 12:52:11,611 [wrapper] pandaids: 6963187069
[2026-01-09 13:52:11] 2026-01-09 12:52:11,641 [wrapper] cleanup supervisor_pilot 11961 21144
[2026-01-09 13:52:11] 2026-01-09 12:52:11,644 [wrapper] Test setup, not cleaning
[2026-01-09 13:52:11] 2026-01-09 12:52:11,649 [wrapper] apfmon messages muted
[2026-01-09 13:52:11] 2026-01-09 12:52:11,652 [wrapper] ==== wrapper stdout END ====
[2026-01-09 13:52:11] 2026-01-09 12:52:11,655 [wrapper] ==== wrapper stderr END ====
[2026-01-09 13:52:11]  *** Error codes and diagnostics ***
[2026-01-09 13:52:11]     "exeErrorCode": 0,
[2026-01-09 13:52:11]     "exeErrorDiag": "",
[2026-01-09 13:52:11]     "pilotErrorCode": 0,
[2026-01-09 13:52:11]     "pilotErrorDiag": "",
[2026-01-09 13:52:11]  *** Listing of results directory ***
[2026-01-09 13:52:11] total 443296
[2026-01-09 13:52:11] -rwx------. 1 boinc boinc     36322 Jan  9 02:01 runpilot2-wrapper.sh
[2026-01-09 13:52:11] -rw-r--r--. 1 boinc boinc    579449 Jan  9 02:06 pilot3.tar.gz
[2026-01-09 13:52:11] -rw-r--r--. 1 boinc boinc      5112 Jan  9 02:06 queuedata.json
[2026-01-09 13:52:11] -rw-r--r--. 1 boinc boinc       100 Jan  9 11:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 13:52:11] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 11:17 run_atlas
[2026-01-09 13:52:11] -rw-r--r--. 1 boinc boinc       105 Jan  9 11:17 job.xml
[2026-01-09 13:52:11] drwxrwx--x. 2 boinc boinc        68 Jan  9 11:17 shared
[2026-01-09 13:52:11] -rw-r--r--. 2 boinc boinc    592398 Jan  9 11:17 input.tar.gz
[2026-01-09 13:52:11] -rw-r--r--. 1 boinc boinc      6390 Jan  9 11:17 init_data.xml
[2026-01-09 13:52:11] -rw-r--r--. 2 boinc boinc 225045758 Jan  9 11:17 EVNT.47898824._001418.pool.root.1
[2026-01-09 13:52:11] -rw-r--r--. 2 boinc boinc     15847 Jan  9 11:17 start_atlas.sh
[2026-01-09 13:52:11] -rw-r--r--. 1 boinc boinc         0 Jan  9 11:17 boinc_lockfile
[2026-01-09 13:52:11] -rw-r--r--. 1 boinc boinc      2519 Jan  9 11:17 pandaJob.out
[2026-01-09 13:52:11] -rw-------. 1 boinc boinc    989369 Jan  9 11:17 agis_schedconf.cvmfs.json
[2026-01-09 13:52:11] -rw-------. 1 boinc boinc   1516240 Jan  9 11:17 agis_ddmendpoints.agis.ALL.json
[2026-01-09 13:52:11] drwx------. 5 boinc boinc      4096 Jan  9 11:17 pilot3
[2026-01-09 13:52:11] -rw-------. 1 boinc boinc 221770244 Jan  9 13:50 HITS.47898826._036977.pool.root.1
[2026-01-09 13:52:11] -rw-r--r--. 1 boinc boinc       530 Jan  9 13:51 boinc_task_state.xml
[2026-01-09 13:52:11] -rw-------. 1 boinc boinc      1012 Jan  9 13:51 memory_monitor_summary.json
[2026-01-09 13:52:11] -rw-------. 1 boinc boinc    373783 Jan  9 13:51 log.47898826._036977.job.log.tgz.1
[2026-01-09 13:52:11] -rw-------. 1 boinc boinc        95 Jan  9 13:51 pilot_heartbeat.json
[2026-01-09 13:52:11] -rw-------. 1 boinc boinc      7773 Jan  9 13:51 heartbeat.json
[2026-01-09 13:52:11] -rw-r--r--. 1 boinc boinc      8192 Jan  9 13:51 boinc_mmap_file
[2026-01-09 13:52:11] -rw-r--r--. 1 boinc boinc        27 Jan  9 13:51 wrapper_checkpoint.txt
[2026-01-09 13:52:11] -rw-------. 1 boinc boinc       860 Jan  9 13:52 pilotlog.txt
[2026-01-09 13:52:11] -rw-------. 1 boinc boinc   1238765 Jan  9 13:52 log.47898826._036977.job.log.1
[2026-01-09 13:52:11] -rw-------. 1 boinc boinc       357 Jan  9 13:52 output.list
[2026-01-09 13:52:11] -rw-r--r--. 1 boinc boinc       620 Jan  9 13:52 runtime_log
[2026-01-09 13:52:11] -rw-------. 1 boinc boinc   1628160 Jan  9 13:52 result.tar.gz
[2026-01-09 13:52:11] -rw-------. 1 boinc boinc       652 Jan  9 13:52 Xt2LDmv3Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmb4lKDmfTy2Dn.diag
[2026-01-09 13:52:11] -rw-r--r--. 1 boinc boinc      8816 Jan  9 13:52 runtime_log.err
[2026-01-09 13:52:11] -rw-r--r--. 1 boinc boinc     21091 Jan  9 13:52 stderr.txt
[2026-01-09 13:52:11] HITS file was successfully produced:
[2026-01-09 13:52:11] -rw-------. 1 boinc boinc 221770244 Jan  9 13:50 shared/HITS.pool.root.1
[2026-01-09 13:52:11]  *** Contents of shared directory: ***
[2026-01-09 13:52:11] total 438536
[2026-01-09 13:52:11] -rw-r--r--. 2 boinc boinc    592398 Jan  9 11:17 input.tar.gz
[2026-01-09 13:52:11] -rw-r--r--. 2 boinc boinc 225045758 Jan  9 11:17 ATLAS.root_0
[2026-01-09 13:52:11] -rw-r--r--. 2 boinc boinc     15847 Jan  9 11:17 start_atlas.sh
[2026-01-09 13:52:11] -rw-------. 1 boinc boinc 221770244 Jan  9 13:50 HITS.pool.root.1
[2026-01-09 13:52:11] -rw-------. 1 boinc boinc   1628160 Jan  9 13:52 result.tar.gz
13:52:13 (17403): run_atlas exited; CPU time 69409.256334
13:52:13 (17403): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN