Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:47:58 (893927): wrapper (7.7.26015): starting
23:47:58 (893927): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 23:47:58] Arguments: --nthreads 12
[2026-01-08 23:47:58] Threads: 12
[2026-01-08 23:47:58] Checking for CVMFS
[2026-01-08 23:47:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 23:47:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 23:47:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 23:47:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 23:47:58] 2.11.5.0 1719783 91181 210948 154936 2 770 30869834 45568000 14051 130560 0 713215448 99.790 435994617 24603 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-01-08 23:47:58] CVMFS is ok
[2026-01-08 23:47:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 23:47:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 23:47:58] Further information can be found at the LHC@home message board.
[2026-01-08 23:47:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 23:47:58] Checking for apptainer binary...
[2026-01-08 23:47:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 23:47:58] Running /usr/bin/apptainer --version
[2026-01-08 23:47:59] apptainer version 1.4.1-1.el9
[2026-01-08 23:47:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 23:47:59] wns0060.triumf.lcg
[2026-01-08 23:47:59] apptainer works
[2026-01-08 23:47:59] Set ATHENA_PROC_NUMBER=12
[2026-01-08 23:47:59] Set ATHENA_CORE_NUMBER=12
[2026-01-08 23:47:59] Starting ATLAS job with PandaID=6963168893
[2026-01-08 23:47:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 23:52:21]  *** The last 200 lines of the pilot log: ***
[2026-01-08 23:52:21] 2026-01-09 07:51:36,416 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 23:52:21] 2026-01-09 07:51:36,416 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 23:52:21] 2026-01-09 07:51:36,417 | WARNING  | wrong length of table data, x=[1767944942.0], y=[1500.0] (must be same and length>=4)
[2026-01-08 23:52:21] 2026-01-09 07:51:36,417 | INFO     | could have reported an average CPU frequency of 2675 MHz (4 samples)
[2026-01-08 23:52:21] 2026-01-09 07:51:36,417 | INFO     | ..............................
[2026-01-08 23:52:21] 2026-01-09 07:51:36,417 | INFO     | . Timing measurements:
[2026-01-08 23:52:21] 2026-01-09 07:51:36,417 | INFO     | . get job = 0 s
[2026-01-08 23:52:21] 2026-01-09 07:51:36,417 | INFO     | . initial setup = 3 s
[2026-01-08 23:52:21] 2026-01-09 07:51:36,417 | INFO     | . payload setup = 18 s
[2026-01-08 23:52:21] 2026-01-09 07:51:36,418 | INFO     | . stage-in = 0 s
[2026-01-08 23:52:21] 2026-01-09 07:51:36,418 | INFO     | . payload execution = 32 s
[2026-01-08 23:52:21] 2026-01-09 07:51:36,418 | INFO     | . stage-out = 0 s
[2026-01-08 23:52:21] 2026-01-09 07:51:36,418 | INFO     | . log creation = 0 s
[2026-01-08 23:52:21] 2026-01-09 07:51:36,418 | INFO     | ..............................
[2026-01-08 23:52:21] 2026-01-09 07:51:36,418 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 23:52:21] 2026-01-09 07:51:36,418 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963168893/pilotlog.txt
[2026-01-08 23:52:21] 2026-01-09 07:51:36,523 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-08 23:52:21] - Log from pilotlog.txt -
[2026-01-08 23:52:21] 2026-01-09 07:51:36,415 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963168893/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 23:52:21] 2026-01-09 07:51:36,416 | INFO     | extracted standard info from prmon json
[2026-01-08 23:52:21] 2026-01-09 07:51:36,416 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 23:52:21] 2026-01-09 07:51:36,416 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 23:52:21] 2026-01-09 07:51:36,416 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 23:52:21] 2026-01-09 07:51:36,416 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 23:52:21] 2026-01-09 07:51:36,417 | WARNING  | wrong length of table data, x=[1767944942.0], y=[1500.0] (must be same and length>=4)
[2026-01-08 23:52:21] 2026-01-09 07:51:36,417 | INFO     | could have reported an average CPU frequency of 2675 MHz (4 samples)
[2026-01-08 23:52:21] 2026-01-09 07:51:36,417 | INFO     | ..............................
[2026-01-08 23:52:21] 2026-01-09 07:51:36,417 | INFO     | . Timing measurements:
[2026-01-08 23:52:21] 2026-01-09 07:51:36,417 | INFO     | . get job = 0 s
[2026-01-08 23:52:21] 2026-01-09 07:51:36,417 | INFO     | . initial setup = 3 s
[2026-01-08 23:52:21] 2026-01-09 07:51:36,417 | INFO     | . payload setup = 18 s
[2026-01-08 23:52:21] 2026-01-09 07:51:36,418 | INFO     | . stage-in = 0 s
[2026-01-08 23:52:21] 2026-01-09 07:51:36,418 | INFO     | . payload execution = 32 s
[2026-01-08 23:52:21] 2026-01-09 07:51:36,418 | INFO     | . stage-out = 0 s
[2026-01-08 23:52:21] 2026-01-09 07:51:36,418 | INFO     | . log creation = 0 s
[2026-01-08 23:52:21] 2026-01-09 07:51:36,418 | INFO     | ..............................
[2026-01-08 23:52:21] 2026-01-09 07:51:36,418 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 23:52:21] 2026-01-09 07:51:36,418 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963168893/pilotlog.txt
[2026-01-08 23:52:21] 2026-01-09 07:51:36,523 | WARNING  | 
[2026-01-08 23:52:21] [begin log extracts]
[2026-01-08 23:52:21] - Log from pilotlog.txt -
[2026-01-08 23:52:21] 2026-01-09 07:51:36,415 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963168893/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 23:52:21] 2026-01-09 07:51:36,416 | INFO     | extracted standard info from prmon json
[2026-01-08 23:52:21] 2026-01-09 07:51:36,416 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 23:52:21] 2026-01-09 07:51:36,416 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 23:52:21] 2026-01-09 07:51:36,416 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 23:52:21] 2026-01-09 07:51:36,416 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 23:52:21] 2026-01-09 07:51:36,417 | WARNING  | wrong length of table data, x=[1767944942.0], y=[1500.0] (must be same and length>=4)
[2026-01-08 23:52:21] 2026-01-09 07:51:36,417 | INFO     | could have reported an average CPU frequency of 2675 MHz (4 samples)
[2026-01-08 23:52:21] 2026-01-09 07:51:36,417 | INFO     | ..............................
[2026-01-08 23:52:21] 2026-01-09 07:51:36,417 | INFO     | . Timing measurements:
[2026-01-08 23:52:21] 2026-01-09 07:51:36,417 | INFO     | . get job = 0 s
[2026-01-08 23:52:21] 2026-01-09 07:51:36,417 | INFO     | . initial setup = 3 s
[2026-01-08 23:52:21] 2026-01-09 07:51:36,417 | INFO     | . payload setup = 18 s
[2026-01-08 23:52:21] 2026-01-09 07:51:36,418 | INFO     | . stage-in = 0 s
[2026-01-08 23:52:21] 2026-01-09 07:51:36,418 | INFO     | . payload execution = 32 s
[2026-01-08 23:52:21] 2026-01-09 07:51:36,418 | INFO     | . stage-out = 0 s
[2026-01-08 23:52:21] 2026-01-09 07:51:36,418 | INFO     | . log creation = 0 s
[2026-01-08 23:52:21] 2026-01-09 07:51:36,418 | INFO     | ..............................
[2026-01-08 23:52:21] 2026-01-09 07:51:36,418 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 23:52:21] 2026-01-09 07:51:36,418 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963168893/pilotlog.txt
[2026-01-08 23:52:21] [end log extracts]
[2026-01-08 23:52:21] 2026-01-09 07:51:36,524 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-08 23:52:21] 2026-01-09 07:51:36,525 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-08 23:52:21] 2026-01-09 07:51:36,842 | INFO     | time since job start (202s) is within the limit (349056.0s)
[2026-01-08 23:52:21] 2026-01-09 07:51:37,446 | INFO     | 
[2026-01-08 23:52:21] 2026-01-09 07:51:37,447 | INFO     | job summary report
[2026-01-08 23:52:21] 2026-01-09 07:51:37,447 | INFO     | --------------------------------------------------
[2026-01-08 23:52:21] 2026-01-09 07:51:37,447 | INFO     | PanDA job id: 6963168893
[2026-01-08 23:52:21] 2026-01-09 07:51:37,447 | INFO     | task id: 47898826
[2026-01-08 23:52:21] 2026-01-09 07:51:37,447 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-08 23:49:19,458 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-08 23:52:21] 2026-01-09 07:51:37,447 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 23:52:21] 2026-01-09 07:51:37,447 | INFO     | pilot state: failed 
[2026-01-08 23:52:21] 2026-01-09 07:51:37,447 | INFO     | transexitcode: 65
[2026-01-08 23:52:21] 2026-01-09 07:51:37,447 | INFO     | exeerrorcode: 65
[2026-01-08 23:52:21] 2026-01-09 07:51:37,447 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 23:52:21] 2026-01-09 07:51:37,447 | INFO     | exitcode: 65
[2026-01-08 23:52:21] 2026-01-09 07:51:37,447 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 23:52:21] 2026-01-09 07:51:37,447 | INFO     | cpuconsumptiontime: 17 s
[2026-01-08 23:52:21] 2026-01-09 07:51:37,447 | INFO     | nevents: 0
[2026-01-08 23:52:21] 2026-01-09 07:51:37,447 | INFO     | neventsw: 0
[2026-01-08 23:52:21] 2026-01-09 07:51:37,447 | INFO     | pid: 914580
[2026-01-08 23:52:21] 2026-01-09 07:51:37,447 | INFO     | pgrp: 914580
[2026-01-08 23:52:21] 2026-01-09 07:51:37,447 | INFO     | corecount: 12
[2026-01-08 23:52:21] 2026-01-09 07:51:37,448 | INFO     | event service: False
[2026-01-08 23:52:21] 2026-01-09 07:51:37,448 | INFO     | sizes: {0: 2283797, 1: 2283996, 9: 2284258, 11: 2284286, 54: 2307702, 55: 2312126, 184: 2312324}
[2026-01-08 23:52:21] 2026-01-09 07:51:37,448 | INFO     | --------------------------------------------------
[2026-01-08 23:52:21] 2026-01-09 07:51:37,448 | INFO     | 
[2026-01-08 23:52:21] 2026-01-09 07:51:37,448 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-08 23:52:21] 2026-01-09 07:51:37,551 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 23:52:21] 2026-01-09 07:51:37,551 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 23:52:21] 2026-01-09 07:51:37,551 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 23:52:21] 2026-01-09 07:51:37,551 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 23:52:21] 2026-01-09 07:51:37,551 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 23:52:21] 2026-01-09 07:51:37,551 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 23:52:21] 2026-01-09 07:51:37,551 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 23:52:21] 2026-01-09 07:51:37,551 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 23:52:21] 2026-01-09 07:51:37,551 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 23:52:21] 2026-01-09 07:51:37,551 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 23:52:21] 2026-01-09 07:51:37,552 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 23:52:21] 2026-01-09 07:51:37,552 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 23:52:21] 2026-01-09 07:51:37,552 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 23:52:21] 2026-01-09 07:51:37,552 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 23:52:21] 2026-01-09 07:51:37,552 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 23:52:21] 2026-01-09 07:51:37,552 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 23:52:21] 2026-01-09 07:51:37,552 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 23:52:21] 2026-01-09 07:51:37,552 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 23:52:21] 2026-01-09 07:51:37,552 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 23:52:21] 2026-01-09 07:51:37,552 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 23:52:21] 2026-01-09 07:51:37,552 | INFO     | job 6963168893 has completed (purged errors)
[2026-01-08 23:52:21] 2026-01-09 07:51:37,552 | INFO     | overall cleanup function is called
[2026-01-08 23:52:21] 2026-01-09 07:51:38,562 | INFO     | --- collectZombieJob: --- 10, [914580]
[2026-01-08 23:52:21] 2026-01-09 07:51:38,563 | INFO     | zombie collector waiting for pid 914580
[2026-01-08 23:52:21] 2026-01-09 07:51:38,563 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 23:52:21] 2026-01-09 07:51:38,563 | INFO     | collected zombie processes
[2026-01-08 23:52:21] 2026-01-09 07:51:38,563 | INFO     | will attempt to kill all subprocesses of pid=914580
[2026-01-08 23:52:21] 2026-01-09 07:51:38,763 | INFO     | process IDs to be killed: [914580] (in reverse order)
[2026-01-08 23:52:21] 2026-01-09 07:51:38,915 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 23:52:21] 2026-01-09 07:51:38,915 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 23:52:21] 2026-01-09 07:51:38,933 | INFO     | did not find any defunct processes belonging to 914580
[2026-01-08 23:52:21] 2026-01-09 07:51:38,965 | INFO     | did not find any defunct processes belonging to 914580
[2026-01-08 23:52:21] 2026-01-09 07:51:38,965 | INFO     | ready for new job
[2026-01-08 23:52:21] 2026-01-09 07:51:38,965 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 23:52:21] 2026-01-09 07:51:38,966 | INFO     | ***************************************
[2026-01-08 23:52:21] 2026-01-09 07:51:38,967 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 23:52:21] 2026-01-09 07:51:38,967 | INFO     | ***************************************
[2026-01-08 23:52:21] 2026-01-09 07:51:38,967 | INFO     | 
[2026-01-08 23:52:21] 2026-01-09 07:51:39,006 | INFO     | architecture information:
[2026-01-08 23:52:21] 2026-01-09 07:51:39,026 | INFO     | executing command: cat /etc/os-release
[2026-01-08 23:52:21] 2026-01-09 07:51:39,136 | INFO     | cat /etc/os-release:
[2026-01-08 23:52:21] NAME="CentOS Linux"
[2026-01-08 23:52:21] VERSION="7 (Core)"
[2026-01-08 23:52:21] ID="centos"
[2026-01-08 23:52:21] ID_LIKE="rhel fedora"
[2026-01-08 23:52:21] VERSION_ID="7"
[2026-01-08 23:52:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 23:52:21] ANSI_COLOR="0;31"
[2026-01-08 23:52:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 23:52:21] HOME_URL="https://www.centos.org/"
[2026-01-08 23:52:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 23:52:21] 
[2026-01-08 23:52:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 23:52:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 23:52:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 23:52:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 23:52:21] 
[2026-01-08 23:52:21] 2026-01-09 07:51:39,136 | INFO     | ***************************************
[2026-01-08 23:52:21] 2026-01-09 07:51:39,644 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-08 23:52:21] 2026-01-09 07:51:39,657 | INFO     | sufficient remaining disk space (1557389115392 B)
[2026-01-08 23:52:21] 2026-01-09 07:51:39,657 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 23:52:21] 2026-01-09 07:51:39,657 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 23:52:21] 2026-01-09 07:51:39,657 | INFO     | update_server=False
[2026-01-08 23:52:21] 2026-01-09 07:51:39,657 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 23:52:21] 2026-01-09 07:51:39,658 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 23:52:21] 2026-01-09 07:51:39,658 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:52:21] 2026-01-09 07:51:39,658 | INFO     | aborting loop
[2026-01-08 23:52:21] 2026-01-09 07:51:39,979 | INFO     | all data control threads have been joined
[2026-01-08 23:52:21] 2026-01-09 07:51:40,665 | INFO     | [job] retrieve thread has finished
[2026-01-08 23:52:21] 2026-01-09 07:51:40,665 | INFO     | [job] job monitor thread has finished
[2026-01-08 23:52:21] 2026-01-09 07:51:40,718 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 23:52:21] 2026-01-09 07:51:40,893 | INFO     | all job control threads have been joined
[2026-01-08 23:52:21] 2026-01-09 07:51:40,896 | INFO     | all payload control threads have been joined
[2026-01-08 23:52:21] 2026-01-09 07:51:40,923 | INFO     | [payload] failed_post thread has finished
[2026-01-08 23:52:21] 2026-01-09 07:51:40,951 | INFO     | [data] copytool_in thread has finished
[2026-01-08 23:52:21] 2026-01-09 07:51:40,986 | INFO     | [data] control thread has finished
[2026-01-08 23:52:21] 2026-01-09 07:51:41,029 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 23:52:21] 2026-01-09 07:51:41,573 | INFO     | [job] validate thread has finished
[2026-01-08 23:52:21] 2026-01-09 07:51:41,671 | INFO     | [data] copytool_out thread has finished
[2026-01-08 23:52:21] 2026-01-09 07:51:41,900 | INFO     | [job] control thread has finished
[2026-01-08 23:52:21] 2026-01-09 07:51:41,902 | INFO     | [payload] control thread has finished
[2026-01-08 23:52:21] 2026-01-09 07:51:41,966 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 23:52:21] 2026-01-09 07:51:41,995 | INFO     | [payload] validate_post thread has finished
[2026-01-08 23:52:21] 2026-01-09 07:51:42,059 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:52:21] 2026-01-09 07:51:42,073 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 23:52:21] 2026-01-09 07:51:42,139 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 23:52:21] 2026-01-09 07:51:43,065 | INFO     | [job] queue monitor thread has finished
[2026-01-08 23:52:21] 2026-01-09 07:51:44,726 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 23:52:21] 2026-01-09 07:52:10,587 | INFO     | PID=897599 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 23:52:21] 2026-01-09 07:52:10,587 | INFO     | .. there are 28 such processes running
[2026-01-08 23:52:21] 2026-01-09 07:52:10,587 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 23:52:21] 2026-01-09 07:52:10,587 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 23:52:21] 2026-01-09 07:52:10,588 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 23:52:21] 2026-01-09 07:52:13,825 | INFO     | [monitor] cgroup control has ended
[2026-01-08 23:52:21] 2026-01-09 07:52:15,002 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140359190312768)>', '<ExcThread(monitor, started 140358658815744)>']
[2026-01-08 23:52:21] 2026-01-09 07:52:15,617 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 23:52:21] 2026-01-09 07:52:15,618 | INFO     | [monitor] control thread has ended
[2026-01-08 23:52:21] 2026-01-09 07:52:20,028 | INFO     | all workflow threads have been joined
[2026-01-08 23:52:21] 2026-01-09 07:52:20,029 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 23:52:21] 2026-01-09 07:52:20,029 | INFO     | traces error code: 0
[2026-01-08 23:52:21] 2026-01-09 07:52:20,029 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 23:52:21] 2026-01-09 07:52:20,520 [wrapper] ==== pilot stdout END ====
[2026-01-08 23:52:21] 2026-01-09 07:52:20,537 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 23:52:21] 2026-01-09 07:52:20,548 [wrapper] pilotpid: 897599
[2026-01-08 23:52:21] 2026-01-09 07:52:20,562 [wrapper] Pilot exit status: 0
[2026-01-08 23:52:21] 2026-01-09 07:52:20,679 [wrapper] pandaids: 6963168893
[2026-01-08 23:52:21] 2026-01-09 07:52:21,124 [wrapper] cleanup supervisor_pilot  897605 897600
[2026-01-08 23:52:21] 2026-01-09 07:52:21,147 [wrapper] Test setup, not cleaning
[2026-01-08 23:52:21] 2026-01-09 07:52:21,180 [wrapper] apfmon messages muted
[2026-01-08 23:52:21] 2026-01-09 07:52:21,190 [wrapper] ==== wrapper stdout END ====
[2026-01-08 23:52:21] 2026-01-09 07:52:21,216 [wrapper] ==== wrapper stderr END ====
[2026-01-08 23:52:21]  *** Error codes and diagnostics ***
[2026-01-08 23:52:21]     "exeErrorCode": 65,
[2026-01-08 23:52:21]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 23:52:21]     "pilotErrorCode": 1305,
[2026-01-08 23:52:21]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 23:52:21]  *** Listing of results directory ***
[2026-01-08 23:52:21] total 223316
[2026-01-08 23:52:21] -rwx------. 1 boinc boinc     36322 Jan  8 17:01 runpilot2-wrapper.sh
[2026-01-08 23:52:21] -rw-r--r--. 1 boinc boinc    579449 Jan  8 17:06 pilot3.tar.gz
[2026-01-08 23:52:21] -rw-r--r--. 1 boinc boinc      5112 Jan  8 17:06 queuedata.json
[2026-01-08 23:52:21] -rw-r--r--. 1 boinc boinc       100 Jan  8 23:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 23:52:21] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 23:47 run_atlas
[2026-01-08 23:52:21] -rw-r--r--. 1 boinc boinc       105 Jan  8 23:47 job.xml
[2026-01-08 23:52:21] -rw-r--r--. 1 boinc boinc      6595 Jan  8 23:47 init_data.xml
[2026-01-08 23:52:21] -rw-r--r--. 2 boinc boinc 224535390 Jan  8 23:47 EVNT.47898824._001395.pool.root.1
[2026-01-08 23:52:21] -rw-r--r--. 2 boinc boinc     15847 Jan  8 23:47 start_atlas.sh
[2026-01-08 23:52:21] drwxrwx--x. 2 boinc boinc      4096 Jan  8 23:47 shared
[2026-01-08 23:52:21] -rw-r--r--. 2 boinc boinc    592407 Jan  8 23:47 input.tar.gz
[2026-01-08 23:52:21] -rw-r--r--. 1 boinc boinc         0 Jan  8 23:47 boinc_lockfile
[2026-01-08 23:52:21] -rw-r--r--. 1 boinc boinc      2520 Jan  8 23:47 pandaJob.out
[2026-01-08 23:52:21] -rw-------. 1 boinc boinc    989771 Jan  8 23:48 agis_schedconf.cvmfs.json
[2026-01-08 23:52:21] -rw-------. 1 boinc boinc   1516240 Jan  8 23:48 agis_ddmendpoints.agis.ALL.json
[2026-01-08 23:52:21] drwx------. 5 boinc boinc      4096 Jan  8 23:48 pilot3
[2026-01-08 23:52:21] -rw-r--r--. 1 boinc boinc       522 Jan  8 23:49 boinc_task_state.xml
[2026-01-08 23:52:21] -rw-------. 1 boinc boinc       967 Jan  8 23:49 memory_monitor_summary.json
[2026-01-08 23:52:21] -rw-------. 1 boinc boinc     21375 Jan  8 23:49 log.47898826._036420.job.log.tgz.1
[2026-01-08 23:52:21] -rw-------. 1 boinc boinc        95 Jan  8 23:51 pilot_heartbeat.json
[2026-01-08 23:52:21] -rw-------. 1 boinc boinc      8435 Jan  8 23:51 heartbeat.json
[2026-01-08 23:52:21] -rw-r--r--. 1 boinc boinc      8192 Jan  8 23:52 boinc_mmap_file
[2026-01-08 23:52:21] -rw-r--r--. 1 boinc boinc        22 Jan  8 23:52 wrapper_checkpoint.txt
[2026-01-08 23:52:21] -rw-------. 1 boinc boinc      4822 Jan  8 23:52 pilotlog.txt
[2026-01-08 23:52:21] -rw-------. 1 boinc boinc     88433 Jan  8 23:52 log.47898826._036420.job.log.1
[2026-01-08 23:52:21] -rw-------. 1 boinc boinc       188 Jan  8 23:52 output.list
[2026-01-08 23:52:21] -rw-r--r--. 1 boinc boinc       620 Jan  8 23:52 runtime_log
[2026-01-08 23:52:21] -rw-------. 1 boinc boinc    133120 Jan  8 23:52 result.tar.gz
[2026-01-08 23:52:21] -rw-r--r--. 1 boinc boinc      8636 Jan  8 23:52 runtime_log.err
[2026-01-08 23:52:21] -rw-------. 1 boinc boinc       644 Jan  8 23:52 oQmNDmZ3Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmyngKDmGZo33m.diag
[2026-01-08 23:52:21] -rw-r--r--. 1 boinc boinc     21331 Jan  8 23:52 stderr.txt
[2026-01-08 23:52:21] No HITS result produced
[2026-01-08 23:52:21]  *** Contents of shared directory: ***
[2026-01-08 23:52:21] total 220008
[2026-01-08 23:52:21] -rw-r--r--. 2 boinc boinc 224535390 Jan  8 23:47 ATLAS.root_0
[2026-01-08 23:52:21] -rw-r--r--. 2 boinc boinc     15847 Jan  8 23:47 start_atlas.sh
[2026-01-08 23:52:21] -rw-r--r--. 2 boinc boinc    592407 Jan  8 23:47 input.tar.gz
[2026-01-08 23:52:21] -rw-------. 1 boinc boinc    133120 Jan  8 23:52 result.tar.gz
23:52:23 (893927): run_atlas exited; CPU time 24.974270
23:52:23 (893927): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN