Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:41:53 (16735): wrapper (7.7.26015): starting
09:41:53 (16735): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 09:41:53] Arguments: --nthreads 8
[2026-01-09 09:41:53] Threads: 8
[2026-01-09 09:41:53] Checking for CVMFS
[2026-01-09 09:41:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 09:41:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 09:41:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 09:41:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 09:41:53] 2.11.2.0 17366 35171 92200 154937 1 57 15859567 25165824 0 130560 0 16174400 99.821 10698290 3890 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 09:41:53] CVMFS is ok
[2026-01-09 09:41:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 09:41:53] Checking for apptainer binary...
[2026-01-09 09:41:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 09:41:53] Running /usr/bin/apptainer --version
[2026-01-09 09:41:54] apptainer version 1.3.2-1.el7
[2026-01-09 09:41:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 09:41:55] cg-vwn463.simple-grid.lan
[2026-01-09 09:41:55] apptainer works
[2026-01-09 09:41:55] Set ATHENA_PROC_NUMBER=8
[2026-01-09 09:41:55] Set ATHENA_CORE_NUMBER=8
[2026-01-09 09:41:55] Starting ATLAS job with PandaID=6963186496
[2026-01-09 09:41:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 12:18:32]  *** The last 200 lines of the pilot log: ***
[2026-01-09 12:18:32] 2026-01-09 11:18:03,839 | INFO     | time since job start (9352s) is within the limit (349056.0s)
[2026-01-09 12:18:32] 2026-01-09 11:18:03,839 | INFO     | 9354s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-09 12:18:32] 2026-01-09 11:18:05,844 | INFO     | time since job start (9354s) is within the limit (349056.0s)
[2026-01-09 12:18:32] 2026-01-09 11:18:05,852 | INFO     | monitor loop #639: job 0:6963186496 is in state 'finished'
[2026-01-09 12:18:32] 2026-01-09 11:18:05,852 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:18:32] 2026-01-09 11:18:07,850 | INFO     | time since job start (9356s) is within the limit (349056.0s)
[2026-01-09 12:18:32] 2026-01-09 11:18:08,356 | INFO     | monitor loop #640: job 0:6963186496 is in state 'finished'
[2026-01-09 12:18:32] 2026-01-09 11:18:08,356 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 12:18:32] 2026-01-09 11:18:09,786 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 12:18:32] 2026-01-09 11:18:09,787 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2026-01-09 12:18:32] 2026-01-09 11:18:09,789 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6963186496/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 12:18:32] 2026-01-09 11:18:09,789 | INFO     | extracted standard info from prmon json
[2026-01-09 12:18:32] 2026-01-09 11:18:09,790 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 12:18:32] 2026-01-09 11:18:09,790 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 12:18:32] 2026-01-09 11:18:09,790 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 12:18:32] 2026-01-09 11:18:09,790 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 12:18:32] 2026-01-09 11:18:09,793 | INFO     | fitting pss+swap vs Time
[2026-01-09 12:18:32] 2026-01-09 11:18:09,794 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 12:18:32] 2026-01-09 11:18:09,795 | INFO     | sum of deviations: 2079076542.0000038
[2026-01-09 12:18:32] 2026-01-09 11:18:09,795 | INFO     | mean x: 1767952798.0
[2026-01-09 12:18:32] 2026-01-09 11:18:09,795 | INFO     | mean y: 2523661.2614379083
[2026-01-09 12:18:32] 2026-01-09 11:18:09,795 | INFO     | intersect: -3307316188.8545194
[2026-01-09 12:18:32] 2026-01-09 11:18:09,796 | INFO     | chi2: 1.6400267145293959
[2026-01-09 12:18:32] 2026-01-09 11:18:09,796 | INFO     | sum of square deviations: 1005179777.0
[2026-01-09 12:18:32] 2026-01-09 11:18:09,797 | INFO     | sum of deviations: 2291399089.5000005
[2026-01-09 12:18:32] 2026-01-09 11:18:09,797 | INFO     | mean x: 1767952645.5
[2026-01-09 12:18:32] 2026-01-09 11:18:09,797 | INFO     | mean y: 2523967.3445945946
[2026-01-09 12:18:32] 2026-01-09 11:18:09,797 | INFO     | intersect: -4027685528.382076
[2026-01-09 12:18:32] 2026-01-09 11:18:09,798 | INFO     | chi2: 1.6412191566616963
[2026-01-09 12:18:32] 2026-01-09 11:18:09,798 | INFO     | current chi2=1.6412191566616963 (change=-0.07270870173859204 %)
[2026-01-09 12:18:32] 2026-01-09 11:18:09,798 | INFO     | right removable region: 147
[2026-01-09 12:18:32] 2026-01-09 11:18:09,799 | INFO     | sum of square deviations: 1005179777.0
[2026-01-09 12:18:32] 2026-01-09 11:18:09,799 | INFO     | sum of deviations: -21093456691.999996
[2026-01-09 12:18:32] 2026-01-09 11:18:09,800 | INFO     | mean x: 1767952950.5
[2026-01-09 12:18:32] 2026-01-09 11:18:09,800 | INFO     | mean y: 2556690.108108108
[2026-01-09 12:18:32] 2026-01-09 11:18:09,800 | INFO     | intersect: 37102625601.32871
[2026-01-09 12:18:32] 2026-01-09 11:18:09,800 | INFO     | chi2: 0.15231856465080373
[2026-01-09 12:18:32] 2026-01-09 11:18:09,800 | INFO     | current chi2=0.15231856465080373 (change=90.71243393163194 %)
[2026-01-09 12:18:32] 2026-01-09 11:18:09,800 | INFO     | sum of square deviations: 906703512.0
[2026-01-09 12:18:32] 2026-01-09 11:18:09,801 | INFO     | sum of deviations: -21589151231.999996
[2026-01-09 12:18:32] 2026-01-09 11:18:09,801 | INFO     | mean x: 1767953103.0
[2026-01-09 12:18:32] 2026-01-09 11:18:09,801 | INFO     | mean y: 2557373.874125874
[2026-01-09 12:18:32] 2026-01-09 11:18:09,802 | INFO     | intersect: 42098574877.49957
[2026-01-09 12:18:32] 2026-01-09 11:18:09,802 | INFO     | chi2: 0.1268239181862269
[2026-01-09 12:18:32] 2026-01-09 11:18:09,802 | INFO     | current chi2=0.1268239181862269 (change=16.737714488725853 %)
[2026-01-09 12:18:32] 2026-01-09 11:18:09,802 | INFO     | left removable region: 20
[2026-01-09 12:18:32] 2026-01-09 11:18:09,802 | INFO     | sum of square deviations: 635130048.0
[2026-01-09 12:18:32] 2026-01-09 11:18:09,803 | INFO     | sum of deviations: -11941726366.000002
[2026-01-09 12:18:32] 2026-01-09 11:18:09,803 | INFO     | mean x: 1767953225.0
[2026-01-09 12:18:32] 2026-01-09 11:18:09,803 | INFO     | mean y: 2543088.818897638
[2026-01-09 12:18:32] 2026-01-09 11:18:09,803 | INFO     | intersect: 33243630811.434776
[2026-01-09 12:18:32] 2026-01-09 11:18:09,803 | INFO     | chi2: 0.10203000527131735
[2026-01-09 12:18:32] 2026-01-09 11:18:09,804 | INFO     | current memory leak: -18.80 B/s (using 127 data points, chi2=0.10)
[2026-01-09 12:18:32] 2026-01-09 11:18:09,804 | INFO     | could have reported an average CPU frequency of 2250 MHz (8 samples)
[2026-01-09 12:18:32] 2026-01-09 11:18:09,804 | INFO     | ..............................
[2026-01-09 12:18:32] 2026-01-09 11:18:09,804 | INFO     | . Timing measurements:
[2026-01-09 12:18:32] 2026-01-09 11:18:09,804 | INFO     | . get job = 0 s
[2026-01-09 12:18:32] 2026-01-09 11:18:09,805 | INFO     | . initial setup = 1 s
[2026-01-09 12:18:32] 2026-01-09 11:18:09,805 | INFO     | . payload setup = 6 s
[2026-01-09 12:18:32] 2026-01-09 11:18:09,805 | INFO     | . stage-in = 0 s
[2026-01-09 12:18:32] 2026-01-09 11:18:09,805 | INFO     | . payload execution = 9321 s
[2026-01-09 12:18:32] 2026-01-09 11:18:09,805 | INFO     | . stage-out = 1 s
[2026-01-09 12:18:32] 2026-01-09 11:18:09,805 | INFO     | . log creation = 0 s
[2026-01-09 12:18:32] 2026-01-09 11:18:09,805 | INFO     | ..............................
[2026-01-09 12:18:32] 2026-01-09 11:18:09,860 | INFO     | time since job start (9358s) is within the limit (349056.0s)
[2026-01-09 12:18:32] 2026-01-09 11:18:09,912 | INFO     | 
[2026-01-09 12:18:32] 2026-01-09 11:18:09,912 | INFO     | job summary report
[2026-01-09 12:18:32] 2026-01-09 11:18:09,912 | INFO     | --------------------------------------------------
[2026-01-09 12:18:32] 2026-01-09 11:18:09,912 | INFO     | PanDA job id: 6963186496
[2026-01-09 12:18:32] 2026-01-09 11:18:09,912 | INFO     | task id: 47898826
[2026-01-09 12:18:32] 2026-01-09 11:18:09,913 | INFO     | errors: (none)
[2026-01-09 12:18:32] 2026-01-09 11:18:09,913 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 12:18:32] 2026-01-09 11:18:09,913 | INFO     | pilot state: finished 
[2026-01-09 12:18:32] 2026-01-09 11:18:09,913 | INFO     | transexitcode: 0
[2026-01-09 12:18:32] 2026-01-09 11:18:09,913 | INFO     | exeerrorcode: 0
[2026-01-09 12:18:32] 2026-01-09 11:18:09,913 | INFO     | exeerrordiag: 
[2026-01-09 12:18:32] 2026-01-09 11:18:09,913 | INFO     | exitcode: 0
[2026-01-09 12:18:32] 2026-01-09 11:18:09,913 | INFO     | exitmsg: OK
[2026-01-09 12:18:32] 2026-01-09 11:18:09,913 | INFO     | cpuconsumptiontime: 69639 s
[2026-01-09 12:18:32] 2026-01-09 11:18:09,913 | INFO     | nevents: 400
[2026-01-09 12:18:32] 2026-01-09 11:18:09,913 | INFO     | neventsw: 0
[2026-01-09 12:18:32] 2026-01-09 11:18:09,914 | INFO     | pid: 26955
[2026-01-09 12:18:32] 2026-01-09 11:18:09,914 | INFO     | pgrp: 26955
[2026-01-09 12:18:32] 2026-01-09 11:18:09,914 | INFO     | corecount: 8
[2026-01-09 12:18:32] 2026-01-09 11:18:09,914 | INFO     | event service: False
[2026-01-09 12:18:32] 2026-01-09 11:18:09,914 | INFO     | sizes: {0: 2283801, 1: 2284000, 6: 2284262, 12: 2284290, 9332: 2312262, 9334: 2321262, 9335: 2321446, 9342: 2321640}
[2026-01-09 12:18:32] 2026-01-09 11:18:09,914 | INFO     | --------------------------------------------------
[2026-01-09 12:18:32] 2026-01-09 11:18:09,914 | INFO     | 
[2026-01-09 12:18:32] 2026-01-09 11:18:09,914 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-01-09 12:18:32] 2026-01-09 11:18:09,944 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 12:18:32] 2026-01-09 11:18:09,945 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 12:18:32] 2026-01-09 11:18:09,945 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 12:18:32] 2026-01-09 11:18:09,945 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 12:18:32] 2026-01-09 11:18:09,945 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 12:18:32] 2026-01-09 11:18:09,945 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 12:18:32] 2026-01-09 11:18:09,945 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 12:18:32] 2026-01-09 11:18:09,945 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 12:18:32] 2026-01-09 11:18:09,945 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 12:18:32] 2026-01-09 11:18:09,946 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 12:18:32] 2026-01-09 11:18:09,946 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 12:18:32] 2026-01-09 11:18:09,946 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 12:18:32] 2026-01-09 11:18:09,946 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 12:18:32] 2026-01-09 11:18:09,946 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 12:18:32] 2026-01-09 11:18:09,946 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 12:18:32] 2026-01-09 11:18:09,946 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 12:18:32] 2026-01-09 11:18:09,946 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 12:18:32] 2026-01-09 11:18:09,946 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 12:18:32] 2026-01-09 11:18:09,946 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 12:18:32] 2026-01-09 11:18:09,947 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 12:18:32] 2026-01-09 11:18:09,947 | INFO     | job 6963186496 has completed (purged errors)
[2026-01-09 12:18:32] 2026-01-09 11:18:09,947 | INFO     | overall cleanup function is called
[2026-01-09 12:18:32] 2026-01-09 11:18:10,957 | INFO     | --- collectZombieJob: --- 10, [26955]
[2026-01-09 12:18:32] 2026-01-09 11:18:10,957 | INFO     | zombie collector waiting for pid 26955
[2026-01-09 12:18:32] 2026-01-09 11:18:10,957 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 12:18:32] 2026-01-09 11:18:10,958 | INFO     | collected zombie processes
[2026-01-09 12:18:32] 2026-01-09 11:18:10,958 | INFO     | will attempt to kill all subprocesses of pid=26955
[2026-01-09 12:18:32] 2026-01-09 11:18:11,026 | INFO     | process IDs to be killed: [26955] (in reverse order)
[2026-01-09 12:18:32] 2026-01-09 11:18:11,070 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 12:18:32] 2026-01-09 11:18:11,070 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 12:18:32] 2026-01-09 11:18:11,072 | INFO     | did not find any defunct processes belonging to 26955
[2026-01-09 12:18:32] 2026-01-09 11:18:11,074 | INFO     | did not find any defunct processes belonging to 26955
[2026-01-09 12:18:32] 2026-01-09 11:18:11,074 | INFO     | ready for new job
[2026-01-09 12:18:32] 2026-01-09 11:18:11,074 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 12:18:32] 2026-01-09 11:18:11,076 | INFO     | ***************************************
[2026-01-09 12:18:32] 2026-01-09 11:18:11,076 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 12:18:32] 2026-01-09 11:18:11,076 | INFO     | ***************************************
[2026-01-09 12:18:32] 2026-01-09 11:18:11,076 | INFO     | 
[2026-01-09 12:18:32] 2026-01-09 11:18:11,077 | INFO     | pilot is running in a VM
[2026-01-09 12:18:32] 2026-01-09 11:18:11,077 | INFO     | architecture information:
[2026-01-09 12:18:32] 2026-01-09 11:18:11,077 | INFO     | executing command: cat /etc/os-release
[2026-01-09 12:18:32] 2026-01-09 11:18:11,094 | INFO     | cat /etc/os-release:
[2026-01-09 12:18:32] NAME="CentOS Linux"
[2026-01-09 12:18:32] VERSION="7 (Core)"
[2026-01-09 12:18:32] ID="centos"
[2026-01-09 12:18:32] ID_LIKE="rhel fedora"
[2026-01-09 12:18:32] VERSION_ID="7"
[2026-01-09 12:18:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 12:18:32] ANSI_COLOR="0;31"
[2026-01-09 12:18:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 12:18:32] HOME_URL="https://www.centos.org/"
[2026-01-09 12:18:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 12:18:32] 
[2026-01-09 12:18:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 12:18:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 12:18:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 12:18:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 12:18:32] 
[2026-01-09 12:18:32] 2026-01-09 11:18:11,094 | INFO     | ***************************************
[2026-01-09 12:18:32] 2026-01-09 11:18:11,597 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-01-09 12:18:32] 2026-01-09 11:18:11,616 | INFO     | sufficient remaining disk space (498279120896 B)
[2026-01-09 12:18:32] 2026-01-09 11:18:11,616 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 12:18:32] 2026-01-09 11:18:11,617 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 12:18:32] 2026-01-09 11:18:11,617 | INFO     | update_server=False
[2026-01-09 12:18:32] 2026-01-09 11:18:11,617 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 12:18:32] 2026-01-09 11:18:11,617 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 12:18:32] 2026-01-09 11:18:11,618 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 12:18:32] 2026-01-09 11:18:11,618 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 12:18:32] 2026-01-09 11:18:11,618 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 12:18:32] 2026-01-09 11:18:11,618 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:18:32] 2026-01-09 11:18:11,864 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 12:18:32] 2026-01-09 11:18:11,865 | INFO     | aborting loop
[2026-01-09 12:18:32] 2026-01-09 11:18:12,389 | INFO     | all job control threads have been joined
[2026-01-09 12:18:32] 2026-01-09 11:18:12,498 | INFO     | all data control threads have been joined
[2026-01-09 12:18:32] 2026-01-09 11:18:12,623 | INFO     | [job] retrieve thread has finished
[2026-01-09 12:18:32] 2026-01-09 11:18:12,624 | INFO     | [job] queue monitor thread has finished
[2026-01-09 12:18:32] 2026-01-09 11:18:12,696 | INFO     | all payload control threads have been joined
[2026-01-09 12:18:32] 2026-01-09 11:18:12,870 | INFO     | [job] job monitor thread has finished
[2026-01-09 12:18:32] 2026-01-09 11:18:12,900 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 12:18:32] 2026-01-09 11:18:13,012 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 12:18:32] 2026-01-09 11:18:13,112 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 12:18:32] 2026-01-09 11:18:13,138 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 12:18:32] 2026-01-09 11:18:13,178 | INFO     | [payload] failed_post thread has finished
[2026-01-09 12:18:32] 2026-01-09 11:18:13,384 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 12:18:32] 2026-01-09 11:18:13,395 | INFO     | [job] control thread has finished
[2026-01-09 12:18:32] 2026-01-09 11:18:13,400 | INFO     | [data] copytool_in thread has finished
[2026-01-09 12:18:32] 2026-01-09 11:18:13,504 | INFO     | [data] control thread has finished
[2026-01-09 12:18:32] 2026-01-09 11:18:13,702 | INFO     | [payload] control thread has finished
[2026-01-09 12:18:32] 2026-01-09 11:18:13,724 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 12:18:32] 2026-01-09 11:18:13,788 | INFO     | [job] validate thread has finished
[2026-01-09 12:18:32] 2026-01-09 11:18:13,804 | INFO     | [payload] validate_post thread has finished
[2026-01-09 12:18:32] 2026-01-09 11:18:15,018 | INFO     | [data] copytool_out thread has finished
[2026-01-09 12:18:32] 2026-01-09 11:18:17,118 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 12:18:32] 2026-01-09 11:18:26,249 | INFO     | [monitor] cgroup control has ended
[2026-01-09 12:18:32] 2026-01-09 11:18:26,685 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140234295830336)>', '<ExcThread(monitor, started 140233551107840)>']
[2026-01-09 12:18:32] 2026-01-09 11:18:26,693 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 12:18:32] 2026-01-09 11:18:26,693 | INFO     | [monitor] control thread has ended
[2026-01-09 12:18:32] 2026-01-09 11:18:31,702 | INFO     | all workflow threads have been joined
[2026-01-09 12:18:32] 2026-01-09 11:18:31,702 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 12:18:32] 2026-01-09 11:18:31,702 | INFO     | traces error code: 0
[2026-01-09 12:18:32] 2026-01-09 11:18:31,703 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 12:18:32] 2026-01-09 11:18:31,837 [wrapper] ==== pilot stdout END ====
[2026-01-09 12:18:32] 2026-01-09 11:18:31,847 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 12:18:32] 2026-01-09 11:18:31,851 [wrapper] pilotpid: 20522
[2026-01-09 12:18:32] 2026-01-09 11:18:31,856 [wrapper] Pilot exit status: 0
[2026-01-09 12:18:32] 2026-01-09 11:18:31,875 [wrapper] pandaids: 6963186496
[2026-01-09 12:18:32] 2026-01-09 11:18:31,906 [wrapper] cleanup supervisor_pilot 11038 20523
[2026-01-09 12:18:32] 2026-01-09 11:18:31,912 [wrapper] Test setup, not cleaning
[2026-01-09 12:18:32] 2026-01-09 11:18:31,917 [wrapper] apfmon messages muted
[2026-01-09 12:18:32] 2026-01-09 11:18:31,923 [wrapper] ==== wrapper stdout END ====
[2026-01-09 12:18:32] 2026-01-09 11:18:31,929 [wrapper] ==== wrapper stderr END ====
[2026-01-09 12:18:32]  *** Error codes and diagnostics ***
[2026-01-09 12:18:32]     "exeErrorCode": 0,
[2026-01-09 12:18:32]     "exeErrorDiag": "",
[2026-01-09 12:18:32]     "pilotErrorCode": 0,
[2026-01-09 12:18:32]     "pilotErrorDiag": "",
[2026-01-09 12:18:32]  *** Listing of results directory ***
[2026-01-09 12:18:32] total 442896
[2026-01-09 12:18:32] -rwx------. 1 boinc boinc     36322 Jan  9 02:01 runpilot2-wrapper.sh
[2026-01-09 12:18:32] -rw-r--r--. 1 boinc boinc    579449 Jan  9 02:06 pilot3.tar.gz
[2026-01-09 12:18:32] -rw-r--r--. 1 boinc boinc      5112 Jan  9 02:06 queuedata.json
[2026-01-09 12:18:32] -rw-r--r--. 1 boinc boinc       100 Jan  9 09:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 12:18:32] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 09:41 run_atlas
[2026-01-09 12:18:32] -rw-r--r--. 1 boinc boinc       105 Jan  9 09:41 job.xml
[2026-01-09 12:18:32] -rw-r--r--. 1 boinc boinc      6390 Jan  9 09:41 init_data.xml
[2026-01-09 12:18:32] -rw-r--r--. 2 boinc boinc 225825360 Jan  9 09:41 EVNT.47898824._001397.pool.root.1
[2026-01-09 12:18:32] -rw-r--r--. 2 boinc boinc     15847 Jan  9 09:41 start_atlas.sh
[2026-01-09 12:18:32] drwxrwx--x. 2 boinc boinc        68 Jan  9 09:41 shared
[2026-01-09 12:18:32] -rw-r--r--. 2 boinc boinc    592403 Jan  9 09:41 input.tar.gz
[2026-01-09 12:18:32] -rw-r--r--. 1 boinc boinc         0 Jan  9 09:41 boinc_lockfile
[2026-01-09 12:18:32] -rw-r--r--. 1 boinc boinc      2520 Jan  9 09:41 pandaJob.out
[2026-01-09 12:18:32] -rw-------. 1 boinc boinc    989759 Jan  9 09:42 agis_schedconf.cvmfs.json
[2026-01-09 12:18:32] -rw-------. 1 boinc boinc   1516240 Jan  9 09:42 agis_ddmendpoints.agis.ALL.json
[2026-01-09 12:18:32] drwx------. 5 boinc boinc      4096 Jan  9 09:42 pilot3
[2026-01-09 12:18:32] -rw-------. 1 boinc boinc 220484871 Jan  9 12:17 HITS.47898826._036472.pool.root.1
[2026-01-09 12:18:32] -rw-r--r--. 1 boinc boinc       529 Jan  9 12:17 boinc_task_state.xml
[2026-01-09 12:18:32] -rw-------. 1 boinc boinc      1015 Jan  9 12:17 memory_monitor_summary.json
[2026-01-09 12:18:32] -rw-------. 1 boinc boinc    399237 Jan  9 12:18 log.47898826._036472.job.log.tgz.1
[2026-01-09 12:18:32] -rw-------. 1 boinc boinc        95 Jan  9 12:18 pilot_heartbeat.json
[2026-01-09 12:18:32] -rw-r--r--. 1 boinc boinc      8192 Jan  9 12:18 boinc_mmap_file
[2026-01-09 12:18:32] -rw-r--r--. 1 boinc boinc        27 Jan  9 12:18 wrapper_checkpoint.txt
[2026-01-09 12:18:32] -rw-------. 1 boinc boinc      7773 Jan  9 12:18 heartbeat.json
[2026-01-09 12:18:32] -rw-------. 1 boinc boinc      4616 Jan  9 12:18 pilotlog.txt
[2026-01-09 12:18:32] -rw-------. 1 boinc boinc   1256738 Jan  9 12:18 log.47898826._036472.job.log.1
[2026-01-09 12:18:32] -rw-------. 1 boinc boinc       357 Jan  9 12:18 output.list
[2026-01-09 12:18:32] -rw-r--r--. 1 boinc boinc       620 Jan  9 12:18 runtime_log
[2026-01-09 12:18:32] -rw-------. 1 boinc boinc   1679360 Jan  9 12:18 result.tar.gz
[2026-01-09 12:18:32] -rw-------. 1 boinc boinc       652 Jan  9 12:18 zlPKDma3Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOogKDmvHtnPm.diag
[2026-01-09 12:18:32] -rw-r--r--. 1 boinc boinc      8832 Jan  9 12:18 runtime_log.err
[2026-01-09 12:18:32] -rw-r--r--. 1 boinc boinc     20922 Jan  9 12:18 stderr.txt
[2026-01-09 12:18:32] HITS file was successfully produced:
[2026-01-09 12:18:32] -rw-------. 1 boinc boinc 220484871 Jan  9 12:17 shared/HITS.pool.root.1
[2026-01-09 12:18:32]  *** Contents of shared directory: ***
[2026-01-09 12:18:32] total 438092
[2026-01-09 12:18:32] -rw-r--r--. 2 boinc boinc 225825360 Jan  9 09:41 ATLAS.root_0
[2026-01-09 12:18:32] -rw-r--r--. 2 boinc boinc     15847 Jan  9 09:41 start_atlas.sh
[2026-01-09 12:18:32] -rw-r--r--. 2 boinc boinc    592403 Jan  9 09:41 input.tar.gz
[2026-01-09 12:18:32] -rw-------. 1 boinc boinc 220484871 Jan  9 12:17 HITS.pool.root.1
[2026-01-09 12:18:32] -rw-------. 1 boinc boinc   1679360 Jan  9 12:18 result.tar.gz
12:18:33 (16735): run_atlas exited; CPU time 69697.206267
12:18:33 (16735): called boinc_finish(0)

</stderr_txt>
]]>

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