Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:40:02 (18978): wrapper (7.7.26015): starting
02:40:02 (18978): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 02:40:02] Arguments: --nthreads 12
[2026-01-09 02:40:02] Threads: 12
[2026-01-09 02:40:02] Checking for CVMFS
[2026-01-09 02:40:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 02:40:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 02:40:02] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 02:40:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 02:40:02] 2.11.2.0 3009 136020 103064 154936 2 58 18204967 20275201 1 130560 0 49129893 99.878 8086423 39472 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 02:40:02] CVMFS is ok
[2026-01-09 02:40:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 02:40:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 02:40:02] Further information can be found at the LHC@home message board.
[2026-01-09 02:40:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 02:40:02] Checking for apptainer binary...
[2026-01-09 02:40:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 02:40:02] Running /usr/bin/apptainer --version
[2026-01-09 02:40:02] apptainer version 1.3.2-1.el7
[2026-01-09 02:40:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 02:40:03] c-115-42.aglt2.org
[2026-01-09 02:40:03] apptainer works
[2026-01-09 02:40:03] Set ATHENA_PROC_NUMBER=12
[2026-01-09 02:40:03] Set ATHENA_CORE_NUMBER=12
[2026-01-09 02:40:03] Starting ATLAS job with PandaID=6963167900
[2026-01-09 02:40:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 04:33:36]  *** The last 200 lines of the pilot log: ***
[2026-01-09 04:33:36] 2026-01-09 09:32:29,602 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 04:33:36] 2026-01-09 09:32:29,609 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.8333333333333
[2026-01-09 04:33:36] 2026-01-09 09:32:29,612 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963167900/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 04:33:36] 2026-01-09 09:32:29,613 | INFO     | extracted standard info from prmon json
[2026-01-09 04:33:36] 2026-01-09 09:32:29,613 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 04:33:36] 2026-01-09 09:32:29,613 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 04:33:36] 2026-01-09 09:32:29,614 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 04:33:36] 2026-01-09 09:32:29,614 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 04:33:36] 2026-01-09 09:32:29,617 | INFO     | fitting pss+swap vs Time
[2026-01-09 04:33:36] 2026-01-09 09:32:29,617 | INFO     | sum of square deviations: 412679737.3545449
[2026-01-09 04:33:36] 2026-01-09 09:32:29,617 | INFO     | sum of deviations: -2086979968.8181815
[2026-01-09 04:33:36] 2026-01-09 09:32:29,618 | INFO     | mean x: 1767947771.5363636
[2026-01-09 04:33:36] 2026-01-09 09:32:29,618 | INFO     | mean y: 2732377.4545454546
[2026-01-09 04:33:36] 2026-01-09 09:32:29,618 | INFO     | intersect: 8943495034.631561
[2026-01-09 04:33:36] 2026-01-09 09:32:29,618 | INFO     | chi2: 1.521879496428199
[2026-01-09 04:33:36] 2026-01-09 09:32:29,618 | INFO     | sum of square deviations: 358921809.8476197
[2026-01-09 04:33:36] 2026-01-09 09:32:29,619 | INFO     | sum of deviations: -1624205124.685708
[2026-01-09 04:33:36] 2026-01-09 09:32:29,619 | INFO     | mean x: 1767947619.0380952
[2026-01-09 04:33:36] 2026-01-09 09:32:29,619 | INFO     | mean y: 2733691.1714285715
[2026-01-09 04:33:36] 2026-01-09 09:32:29,619 | INFO     | intersect: 8003110108.075906
[2026-01-09 04:33:36] 2026-01-09 09:32:29,619 | INFO     | chi2: 1.5229108662589255
[2026-01-09 04:33:36] 2026-01-09 09:32:29,620 | INFO     | current chi2=1.5229108662589255 (change=-0.06776948064200108 %)
[2026-01-09 04:33:36] 2026-01-09 09:32:29,620 | INFO     | right removable region: 104
[2026-01-09 04:33:36] 2026-01-09 09:32:29,620 | INFO     | sum of square deviations: 358919369.8476197
[2026-01-09 04:33:36] 2026-01-09 09:32:29,621 | INFO     | sum of deviations: -18741067586.514286
[2026-01-09 04:33:36] 2026-01-09 09:32:29,621 | INFO     | mean x: 1767947924.0380952
[2026-01-09 04:33:36] 2026-01-09 09:32:29,621 | INFO     | mean y: 2778505.6285714284
[2026-01-09 04:33:36] 2026-01-09 09:32:29,621 | INFO     | intersect: 92316635926.87161
[2026-01-09 04:33:36] 2026-01-09 09:32:29,621 | INFO     | chi2: 0.0890030004864545
[2026-01-09 04:33:36] 2026-01-09 09:32:29,621 | INFO     | current chi2=0.0890030004864545 (change=94.15177084024447 %)
[2026-01-09 04:33:36] 2026-01-09 09:32:29,622 | INFO     | sufficient remaining disk space (18528337920 B)
[2026-01-09 04:33:36] 2026-01-09 09:32:29,622 | INFO     | sum of square deviations: 310042814.84000015
[2026-01-09 04:33:36] 2026-01-09 09:32:29,623 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-09 04:33:36] 2026-01-09 09:32:29,623 | INFO     | sum of deviations: -16460793584.640001
[2026-01-09 04:33:36] 2026-01-09 09:32:29,624 | INFO     | mean x: 1767948076.54
[2026-01-09 04:33:36] 2026-01-09 09:32:29,624 | INFO     | mean y: 2771353.16
[2026-01-09 04:33:36] 2026-01-09 09:32:29,624 | INFO     | intersect: 93866673251.04617
[2026-01-09 04:33:36] 2026-01-09 09:32:29,624 | INFO     | chi2: 0.08836530090867593
[2026-01-09 04:33:36] 2026-01-09 09:32:29,625 | INFO     | current chi2=0.08836530090867593 (change=0.7164922241870025 %)
[2026-01-09 04:33:36] 2026-01-09 09:32:29,625 | INFO     | left removable region: 20
[2026-01-09 04:33:36] 2026-01-09 09:32:29,625 | INFO     | sum of square deviations: 183751098.809524
[2026-01-09 04:33:36] 2026-01-09 09:32:29,625 | INFO     | sum of deviations: -9957704080.285715
[2026-01-09 04:33:36] 2026-01-09 09:32:29,626 | INFO     | mean x: 1767948198.547619
[2026-01-09 04:33:36] 2026-01-09 09:32:29,626 | INFO     | mean y: 2753622.5714285714
[2026-01-09 04:33:36] 2026-01-09 09:32:29,626 | INFO     | intersect: 95810099017.87927
[2026-01-09 04:33:36] 2026-01-09 09:32:29,626 | INFO     | chi2: 0.07875922469917486
[2026-01-09 04:33:36] 2026-01-09 09:32:29,627 | INFO     | current memory leak: -54.19 B/s (using 84 data points, chi2=0.08)
[2026-01-09 04:33:36] 2026-01-09 09:32:29,627 | INFO     | could have reported an average CPU frequency of 2259 MHz (7 samples)
[2026-01-09 04:33:36] 2026-01-09 09:32:29,627 | INFO     | ..............................
[2026-01-09 04:33:36] 2026-01-09 09:32:29,627 | INFO     | . Timing measurements:
[2026-01-09 04:33:36] 2026-01-09 09:32:29,628 | INFO     | . get job = 0 s
[2026-01-09 04:33:36] 2026-01-09 09:32:29,628 | INFO     | . initial setup = 2 s
[2026-01-09 04:33:36] 2026-01-09 09:32:29,628 | INFO     | . payload setup = 6 s
[2026-01-09 04:33:36] 2026-01-09 09:32:29,628 | INFO     | . stage-in = 0 s
[2026-01-09 04:33:36] 2026-01-09 09:32:29,628 | INFO     | . payload execution = 6698 s
[2026-01-09 04:33:36] 2026-01-09 09:32:29,628 | INFO     | . stage-out = 0 s
[2026-01-09 04:33:36] 2026-01-09 09:32:29,629 | INFO     | . log creation = 0 s
[2026-01-09 04:33:36] 2026-01-09 09:32:29,629 | INFO     | ..............................
[2026-01-09 04:33:36] 2026-01-09 09:32:29,630 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6963167900: 4151921 B (within 4404019200 B limit)
[2026-01-09 04:33:36] 2026-01-09 09:32:29,651 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6963167900/HITS.47898826._036102.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-09 04:33:36] 2026-01-09 09:32:29,661 | INFO     | total size of present files: 0 B (workdir size: 4151921 B)
[2026-01-09 04:33:36] 2026-01-09 09:32:29,667 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6963167900/HITS.47898826._036102.pool.root.1 since it does not exist
[2026-01-09 04:33:36] 2026-01-09 09:32:29,707 | INFO     | 
[2026-01-09 04:33:36] 2026-01-09 09:32:29,707 | INFO     | job summary report
[2026-01-09 04:33:36] 2026-01-09 09:32:29,708 | INFO     | --------------------------------------------------
[2026-01-09 04:33:36] 2026-01-09 09:32:29,708 | INFO     | PanDA job id: 6963167900
[2026-01-09 04:33:36] 2026-01-09 09:32:29,708 | INFO     | task id: 47898826
[2026-01-09 04:33:36] 2026-01-09 09:32:29,708 | INFO     | errors: (none)
[2026-01-09 04:33:36] 2026-01-09 09:32:29,708 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 04:33:36] 2026-01-09 09:32:29,708 | INFO     | pilot state: finished 
[2026-01-09 04:33:36] 2026-01-09 09:32:29,709 | INFO     | transexitcode: 0
[2026-01-09 04:33:36] 2026-01-09 09:32:29,709 | INFO     | exeerrorcode: 0
[2026-01-09 04:33:36] 2026-01-09 09:32:29,709 | INFO     | exeerrordiag: 
[2026-01-09 04:33:36] 2026-01-09 09:32:29,709 | INFO     | exitcode: 0
[2026-01-09 04:33:36] 2026-01-09 09:32:29,709 | INFO     | exitmsg: OK
[2026-01-09 04:33:36] 2026-01-09 09:32:29,710 | INFO     | cpuconsumptiontime: 61679 s
[2026-01-09 04:33:36] 2026-01-09 09:32:29,711 | INFO     | nevents: 400
[2026-01-09 04:33:36] 2026-01-09 09:32:29,711 | INFO     | neventsw: 0
[2026-01-09 04:33:36] 2026-01-09 09:32:29,711 | INFO     | pid: 29032
[2026-01-09 04:33:36] 2026-01-09 09:32:29,712 | INFO     | pgrp: 29032
[2026-01-09 04:33:36] 2026-01-09 09:32:29,712 | INFO     | corecount: 12
[2026-01-09 04:33:36] 2026-01-09 09:32:29,712 | INFO     | event service: False
[2026-01-09 04:33:36] 2026-01-09 09:32:29,713 | INFO     | sizes: {0: 2283800, 1: 2283999, 5: 2284261, 11: 2284317, 6708: 2311432, 6709: 2320614, 6715: 2320780}
[2026-01-09 04:33:36] 2026-01-09 09:32:29,713 | INFO     | --------------------------------------------------
[2026-01-09 04:33:36] 2026-01-09 09:32:29,713 | INFO     | 
[2026-01-09 04:33:36] 2026-01-09 09:32:29,714 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 04:33:36] 2026-01-09 09:32:29,735 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 04:33:36] 2026-01-09 09:32:29,735 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 04:33:36] 2026-01-09 09:32:29,735 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 04:33:36] 2026-01-09 09:32:29,736 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 04:33:36] 2026-01-09 09:32:29,736 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 04:33:36] 2026-01-09 09:32:29,736 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 04:33:36] 2026-01-09 09:32:29,736 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 04:33:36] 2026-01-09 09:32:29,736 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 04:33:36] 2026-01-09 09:32:29,736 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 04:33:36] 2026-01-09 09:32:29,737 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 04:33:36] 2026-01-09 09:32:29,737 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 04:33:36] 2026-01-09 09:32:29,737 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 04:33:36] 2026-01-09 09:32:29,737 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 04:33:36] 2026-01-09 09:32:29,737 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 04:33:36] 2026-01-09 09:32:29,737 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 04:33:36] 2026-01-09 09:32:29,738 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 04:33:36] 2026-01-09 09:32:29,738 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 04:33:36] 2026-01-09 09:32:29,738 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 04:33:36] 2026-01-09 09:32:29,738 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 04:33:36] 2026-01-09 09:32:29,739 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 04:33:36] 2026-01-09 09:32:29,739 | INFO     | job 6963167900 has completed (purged errors)
[2026-01-09 04:33:36] 2026-01-09 09:32:29,739 | INFO     | overall cleanup function is called
[2026-01-09 04:33:36] 2026-01-09 09:32:29,811 | INFO     | number of running child processes to parent process 29032: 1
[2026-01-09 04:33:36] 2026-01-09 09:32:29,811 | INFO     | maximum number of monitored processes: 6
[2026-01-09 04:33:36] 2026-01-09 09:32:29,811 | INFO     | aborting job monitoring since job object (job id=6963167900) has expired
[2026-01-09 04:33:36] 2026-01-09 09:32:30,749 | INFO     | --- collectZombieJob: --- 10, [29032]
[2026-01-09 04:33:36] 2026-01-09 09:32:30,749 | INFO     | zombie collector waiting for pid 29032
[2026-01-09 04:33:36] 2026-01-09 09:32:30,749 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 04:33:36] 2026-01-09 09:32:30,749 | INFO     | collected zombie processes
[2026-01-09 04:33:36] 2026-01-09 09:32:30,749 | INFO     | will attempt to kill all subprocesses of pid=29032
[2026-01-09 04:33:36] 2026-01-09 09:32:30,835 | INFO     | process IDs to be killed: [29032] (in reverse order)
[2026-01-09 04:33:36] 2026-01-09 09:32:30,888 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 04:33:36] 2026-01-09 09:32:30,888 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 04:33:36] 2026-01-09 09:32:30,892 | INFO     | did not find any defunct processes belonging to 29032
[2026-01-09 04:33:36] 2026-01-09 09:32:30,896 | INFO     | did not find any defunct processes belonging to 29032
[2026-01-09 04:33:36] 2026-01-09 09:32:30,896 | INFO     | ready for new job
[2026-01-09 04:33:36] 2026-01-09 09:32:30,896 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 04:33:36] 2026-01-09 09:32:30,897 | INFO     | ***************************************
[2026-01-09 04:33:36] 2026-01-09 09:32:30,898 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 04:33:36] 2026-01-09 09:32:30,898 | INFO     | ***************************************
[2026-01-09 04:33:36] 2026-01-09 09:32:30,898 | INFO     | 
[2026-01-09 04:33:36] 2026-01-09 09:32:30,898 | INFO     | architecture information:
[2026-01-09 04:33:36] 2026-01-09 09:32:30,899 | INFO     | executing command: cat /etc/os-release
[2026-01-09 04:33:36] 2026-01-09 09:32:30,914 | INFO     | cat /etc/os-release:
[2026-01-09 04:33:36] NAME="CentOS Linux"
[2026-01-09 04:33:36] VERSION="7 (Core)"
[2026-01-09 04:33:36] ID="centos"
[2026-01-09 04:33:36] ID_LIKE="rhel fedora"
[2026-01-09 04:33:36] VERSION_ID="7"
[2026-01-09 04:33:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 04:33:36] ANSI_COLOR="0;31"
[2026-01-09 04:33:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 04:33:36] HOME_URL="https://www.centos.org/"
[2026-01-09 04:33:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 04:33:36] 
[2026-01-09 04:33:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 04:33:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 04:33:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 04:33:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 04:33:36] 
[2026-01-09 04:33:36] 2026-01-09 09:32:30,914 | INFO     | ***************************************
[2026-01-09 04:33:36] 2026-01-09 09:32:31,417 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 04:33:36] 2026-01-09 09:32:31,433 | INFO     | sufficient remaining disk space (18533580800 B)
[2026-01-09 04:33:36] 2026-01-09 09:32:31,434 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 04:33:36] 2026-01-09 09:32:31,434 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 04:33:36] 2026-01-09 09:32:31,434 | INFO     | update_server=False
[2026-01-09 04:33:36] 2026-01-09 09:32:31,434 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 04:33:36] 2026-01-09 09:32:31,435 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 04:33:36] 2026-01-09 09:32:31,435 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 04:33:36] 2026-01-09 09:32:31,435 | INFO     | aborting loop
[2026-01-09 04:33:36] 2026-01-09 09:32:31,507 | INFO     | all data control threads have been joined
[2026-01-09 04:33:36] 2026-01-09 09:32:31,686 | INFO     | all payload control threads have been joined
[2026-01-09 04:33:36] 2026-01-09 09:32:31,793 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 04:33:36] 2026-01-09 09:32:32,437 | INFO     | [job] queue monitor thread has finished
[2026-01-09 04:33:36] 2026-01-09 09:32:32,440 | INFO     | [job] retrieve thread has finished
[2026-01-09 04:33:36] 2026-01-09 09:32:32,441 | INFO     | [job] job monitor thread has finished
[2026-01-09 04:33:36] 2026-01-09 09:32:32,512 | INFO     | [data] control thread has finished
[2026-01-09 04:33:36] 2026-01-09 09:32:32,630 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 04:33:36] 2026-01-09 09:32:32,692 | INFO     | [payload] control thread has finished
[2026-01-09 04:33:36] 2026-01-09 09:32:32,697 | INFO     | all job control threads have been joined
[2026-01-09 04:33:36] 2026-01-09 09:32:32,903 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 04:33:36] 2026-01-09 09:32:32,930 | INFO     | [job] validate thread has finished
[2026-01-09 04:33:36] 2026-01-09 09:32:33,403 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 04:33:36] 2026-01-09 09:32:33,574 | INFO     | [payload] validate_post thread has finished
[2026-01-09 04:33:36] 2026-01-09 09:32:33,692 | INFO     | [payload] failed_post thread has finished
[2026-01-09 04:33:36] 2026-01-09 09:32:33,702 | INFO     | [job] control thread has finished
[2026-01-09 04:33:36] 2026-01-09 09:32:33,730 | INFO     | [data] copytool_in thread has finished
[2026-01-09 04:33:36] 2026-01-09 09:32:33,798 | INFO     | [data] copytool_out thread has finished
[2026-01-09 04:33:36] 2026-01-09 09:32:34,367 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 04:33:36] 2026-01-09 09:32:38,373 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 04:33:36] 2026-01-09 09:32:41,873 | INFO     | job.realtimelogging is not enabled
[2026-01-09 04:33:36] 2026-01-09 09:32:42,878 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 04:33:36] 2026-01-09 09:33:01,565 | INFO     | PID=22667 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 04:33:36] 2026-01-09 09:33:01,566 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 04:33:36] 2026-01-09 09:33:01,566 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 04:33:36] 2026-01-09 09:33:01,566 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 04:33:36] 2026-01-09 09:33:29,234 | INFO     | [monitor] cgroup control has ended
[2026-01-09 04:33:36] 2026-01-09 09:33:30,964 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140433622902592)>', '<ExcThread(monitor, started 140432814110464)>']
[2026-01-09 04:33:36] 2026-01-09 09:33:31,701 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 04:33:36] 2026-01-09 09:33:31,701 | INFO     | [monitor] control thread has ended
[2026-01-09 04:33:36] 2026-01-09 09:33:35,971 | INFO     | all workflow threads have been joined
[2026-01-09 04:33:36] 2026-01-09 09:33:35,971 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 04:33:36] 2026-01-09 09:33:35,971 | INFO     | traces error code: 0
[2026-01-09 04:33:36] 2026-01-09 09:33:35,972 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 04:33:36] 2026-01-09 09:33:36,062 [wrapper] ==== pilot stdout END ====
[2026-01-09 04:33:36] 2026-01-09 09:33:36,066 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 04:33:36] 2026-01-09 09:33:36,070 [wrapper] pilotpid: 22667
[2026-01-09 04:33:36] 2026-01-09 09:33:36,074 [wrapper] Pilot exit status: 0
[2026-01-09 04:33:36] 2026-01-09 09:33:36,092 [wrapper] pandaids: 6963167900
[2026-01-09 04:33:36] 2026-01-09 09:33:36,136 [wrapper] cleanup supervisor_pilot 30436 22668
[2026-01-09 04:33:36] 2026-01-09 09:33:36,140 [wrapper] Test setup, not cleaning
[2026-01-09 04:33:36] 2026-01-09 09:33:36,144 [wrapper] apfmon messages muted
[2026-01-09 04:33:36] 2026-01-09 09:33:36,148 [wrapper] ==== wrapper stdout END ====
[2026-01-09 04:33:36] 2026-01-09 09:33:36,152 [wrapper] ==== wrapper stderr END ====
[2026-01-09 04:33:36]  *** Error codes and diagnostics ***
[2026-01-09 04:33:36]     "exeErrorCode": 0,
[2026-01-09 04:33:36]     "exeErrorDiag": "",
[2026-01-09 04:33:36]     "pilotErrorCode": 0,
[2026-01-09 04:33:36]     "pilotErrorDiag": "",
[2026-01-09 04:33:36]  *** Listing of results directory ***
[2026-01-09 04:33:36] total 443592
[2026-01-09 04:33:36] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 04:33:36] -rwx------ 1 boincer umatlas     36322 Jan  8 19:59 runpilot2-wrapper.sh
[2026-01-09 04:33:36] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 20:03 queuedata.json
[2026-01-09 04:33:36] -rw-r--r-- 1 boincer umatlas       100 Jan  9 02:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 04:33:36] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 02:40 run_atlas
[2026-01-09 04:33:36] -rw-r--r-- 1 boincer umatlas       105 Jan  9 02:40 job.xml
[2026-01-09 04:33:36] -rw-r--r-- 2 boincer umatlas 225248561 Jan  9 02:40 EVNT.47898824._001343.pool.root.1
[2026-01-09 04:33:36] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 02:40 start_atlas.sh
[2026-01-09 04:33:36] drwxrwx--x 2 boincer umatlas      4096 Jan  9 02:40 shared
[2026-01-09 04:33:36] -rw-r--r-- 2 boincer umatlas    592401 Jan  9 02:40 input.tar.gz
[2026-01-09 04:33:36] -rw-r--r-- 1 boincer umatlas         0 Jan  9 02:40 boinc_lockfile
[2026-01-09 04:33:36] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 02:40 pandaJob.out
[2026-01-09 04:33:36] -rw------- 1 boincer umatlas        57 Jan  9 02:40 setup.sh.local
[2026-01-09 04:33:36] -rw------- 1 boincer umatlas    989771 Jan  9 02:40 agis_schedconf.cvmfs.json
[2026-01-09 04:33:36] -rw------- 1 boincer umatlas   1516240 Jan  9 02:40 agis_ddmendpoints.agis.ALL.json
[2026-01-09 04:33:36] drwx------ 5 boincer umatlas      4096 Jan  9 02:40 pilot3
[2026-01-09 04:33:36] -rw-r--r-- 1 boincer umatlas      5954 Jan  9 04:31 init_data.xml
[2026-01-09 04:33:36] -rw------- 1 boincer umatlas 222365058 Jan  9 04:31 HITS.47898826._036102.pool.root.1
[2026-01-09 04:33:36] -rw-r--r-- 1 boincer umatlas       529 Jan  9 04:31 boinc_task_state.xml
[2026-01-09 04:33:36] -rw------- 1 boincer umatlas      1049 Jan  9 04:32 memory_monitor_summary.json
[2026-01-09 04:33:36] -rw------- 1 boincer umatlas    405549 Jan  9 04:32 log.47898826._036102.job.log.tgz.1
[2026-01-09 04:33:36] -rw------- 1 boincer umatlas      7854 Jan  9 04:32 heartbeat.json
[2026-01-09 04:33:36] -rw------- 1 boincer umatlas        95 Jan  9 04:33 pilot_heartbeat.json
[2026-01-09 04:33:36] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 04:33 boinc_mmap_file
[2026-01-09 04:33:36] -rw-r--r-- 1 boincer umatlas        27 Jan  9 04:33 wrapper_checkpoint.txt
[2026-01-09 04:33:36] -rw------- 1 boincer umatlas      4818 Jan  9 04:33 pilotlog.txt
[2026-01-09 04:33:36] -rw------- 1 boincer umatlas    947705 Jan  9 04:33 log.47898826._036102.job.log.1
[2026-01-09 04:33:36] -rw------- 1 boincer umatlas       357 Jan  9 04:33 output.list
[2026-01-09 04:33:36] -rw-r--r-- 1 boincer umatlas       620 Jan  9 04:33 runtime_log
[2026-01-09 04:33:36] -rw------- 1 boincer umatlas   1372160 Jan  9 04:33 result.tar.gz
[2026-01-09 04:33:36] -rw-r--r-- 1 boincer umatlas      9344 Jan  9 04:33 runtime_log.err
[2026-01-09 04:33:36] -rw------- 1 boincer umatlas       659 Jan  9 04:33 55oLDmZ1Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmIngKDmAxlXEo.diag
[2026-01-09 04:33:36] -rw-r--r-- 1 boincer umatlas     21524 Jan  9 04:33 stderr.txt
[2026-01-09 04:33:36] HITS file was successfully produced:
[2026-01-09 04:33:36] -rw------- 1 boincer umatlas 222365058 Jan  9 04:31 shared/HITS.pool.root.1
[2026-01-09 04:33:36]  *** Contents of shared directory: ***
[2026-01-09 04:33:36] total 439068
[2026-01-09 04:33:36] -rw-r--r-- 2 boincer umatlas 225248561 Jan  9 02:40 ATLAS.root_0
[2026-01-09 04:33:36] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 02:40 start_atlas.sh
[2026-01-09 04:33:36] -rw-r--r-- 2 boincer umatlas    592401 Jan  9 02:40 input.tar.gz
[2026-01-09 04:33:36] -rw------- 1 boincer umatlas 222365058 Jan  9 04:31 HITS.pool.root.1
[2026-01-09 04:33:36] -rw------- 1 boincer umatlas   1372160 Jan  9 04:33 result.tar.gz
04:33:37 (18978): run_atlas exited; CPU time 61638.666278
04:33:37 (18978): called boinc_finish(0)

</stderr_txt>
]]>

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