Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:33:10 (31402): wrapper (7.7.26015): starting
02:33:10 (31402): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 02:33:10] Arguments: --nthreads 8
[2026-01-09 02:33:10] Threads: 8
[2026-01-09 02:33:10] Checking for CVMFS
[2026-01-09 02:33:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 02:33:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 02:33:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 02:33:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 02:33:11] 2.11.2.0 2888 111929 107720 154936 2 58 19306815 20275200 1 130560 0 23344365 99.770 7642395 32372 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 02:33:11] CVMFS is ok
[2026-01-09 02:33:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 02:33:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 02:33:11] Further information can be found at the LHC@home message board.
[2026-01-09 02:33:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 02:33:11] Checking for apptainer binary...
[2026-01-09 02:33:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 02:33:11] Running /usr/bin/apptainer --version
[2026-01-09 02:33:11] apptainer version 1.3.2-1.el7
[2026-01-09 02:33:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 02:33:13] c-204-6.aglt2.org
[2026-01-09 02:33:13] apptainer works
[2026-01-09 02:33:13] Set ATHENA_PROC_NUMBER=8
[2026-01-09 02:33:13] Set ATHENA_CORE_NUMBER=8
[2026-01-09 02:33:13] Starting ATLAS job with PandaID=6963186606
[2026-01-09 02:33:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 05:49:57]  *** The last 200 lines of the pilot log: ***
[2026-01-09 05:49:57] 2026-01-09 10:48:53,255 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 05:49:57] 2026-01-09 10:48:54,590 | INFO     | time since job start (11723s) is within the limit (349056.0s)
[2026-01-09 05:49:57] 2026-01-09 10:48:55,435 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 05:49:57] 2026-01-09 10:48:55,439 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2026-01-09 05:49:57] 2026-01-09 10:48:55,442 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963186606/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 05:49:57] 2026-01-09 10:48:55,442 | INFO     | extracted standard info from prmon json
[2026-01-09 05:49:57] 2026-01-09 10:48:55,443 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 05:49:57] 2026-01-09 10:48:55,443 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 05:49:57] 2026-01-09 10:48:55,444 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 05:49:57] 2026-01-09 10:48:55,444 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 05:49:57] 2026-01-09 10:48:55,449 | INFO     | fitting pss+swap vs Time
[2026-01-09 05:49:57] 2026-01-09 10:48:55,449 | INFO     | sum of square deviations: 2194669773.9948006
[2026-01-09 05:49:57] 2026-01-09 10:48:55,450 | INFO     | sum of deviations: -19403247432.81772
[2026-01-09 05:49:57] 2026-01-09 10:48:55,450 | INFO     | mean x: 1767949869.5052083
[2026-01-09 05:49:57] 2026-01-09 10:48:55,451 | INFO     | mean y: 2524107.3177083335
[2026-01-09 05:49:57] 2026-01-09 10:48:55,451 | INFO     | intersect: 15633107429.375444
[2026-01-09 05:49:57] 2026-01-09 10:48:55,451 | INFO     | chi2: 2.4247652027545863
[2026-01-09 05:49:57] 2026-01-09 10:48:55,451 | INFO     | sum of square deviations: 2027634388.994655
[2026-01-09 05:49:57] 2026-01-09 10:48:55,452 | INFO     | sum of deviations: -6035031647.385027
[2026-01-09 05:49:57] 2026-01-09 10:48:55,453 | INFO     | mean x: 1767949717.0053475
[2026-01-09 05:49:57] 2026-01-09 10:48:55,453 | INFO     | mean y: 2536066.385026738
[2026-01-09 05:49:57] 2026-01-09 10:48:55,453 | INFO     | intersect: 5264644734.014653
[2026-01-09 05:49:57] 2026-01-09 10:48:55,453 | INFO     | chi2: 1.658171966296915
[2026-01-09 05:49:57] 2026-01-09 10:48:55,453 | INFO     | current chi2=1.658171966296915 (change=31.615153318218383 %)
[2026-01-09 05:49:57] 2026-01-09 10:48:55,454 | INFO     | sum of square deviations: 1869296841.4945054
[2026-01-09 05:49:57] 2026-01-09 10:48:55,455 | INFO     | sum of deviations: -5663442392.362632
[2026-01-09 05:49:57] 2026-01-09 10:48:55,455 | INFO     | mean x: 1767949564.5054946
[2026-01-09 05:49:57] 2026-01-09 10:48:55,455 | INFO     | mean y: 2536424.3626373624
[2026-01-09 05:49:57] 2026-01-09 10:48:55,455 | INFO     | intersect: 5358925141.723503
[2026-01-09 05:49:57] 2026-01-09 10:48:55,455 | INFO     | chi2: 1.6579235617458496
[2026-01-09 05:49:57] 2026-01-09 10:48:55,455 | INFO     | current chi2=1.6579235617458496 (change=0.01498062662463684 %)
[2026-01-09 05:49:57] 2026-01-09 10:48:55,456 | INFO     | right removable region: 181
[2026-01-09 05:49:57] 2026-01-09 10:48:55,456 | INFO     | sum of square deviations: 2027633778.994655
[2026-01-09 05:49:57] 2026-01-09 10:48:55,457 | INFO     | sum of deviations: -47908832536.17113
[2026-01-09 05:49:57] 2026-01-09 10:48:55,457 | INFO     | mean x: 1767950022.0053475
[2026-01-09 05:49:57] 2026-01-09 10:48:55,457 | INFO     | mean y: 2549808.1711229947
[2026-01-09 05:49:57] 2026-01-09 10:48:55,457 | INFO     | intersect: 41775587135.73555
[2026-01-09 05:49:57] 2026-01-09 10:48:55,458 | INFO     | chi2: 0.9888615342477554
[2026-01-09 05:49:57] 2026-01-09 10:48:55,458 | INFO     | current chi2=0.9888615342477554 (change=59.218256137774205 %)
[2026-01-09 05:49:57] 2026-01-09 10:48:55,458 | INFO     | sum of square deviations: 1869295621.4945054
[2026-01-09 05:49:57] 2026-01-09 10:48:55,459 | INFO     | sum of deviations: -49722736227.86811
[2026-01-09 05:49:57] 2026-01-09 10:48:55,459 | INFO     | mean x: 1767950174.5054946
[2026-01-09 05:49:57] 2026-01-09 10:48:55,459 | INFO     | mean y: 2551521.868131868
[2026-01-09 05:49:57] 2026-01-09 10:48:55,460 | INFO     | intersect: 47029527448.05579
[2026-01-09 05:49:57] 2026-01-09 10:48:55,460 | INFO     | chi2: 0.9572430404327523
[2026-01-09 05:49:57] 2026-01-09 10:48:55,460 | INFO     | current chi2=0.9572430404327523 (change=3.1974642272900007 %)
[2026-01-09 05:49:57] 2026-01-09 10:48:55,460 | INFO     | left removable region: 20
[2026-01-09 05:49:57] 2026-01-09 10:48:55,460 | INFO     | sum of square deviations: 1294008616.9937937
[2026-01-09 05:49:57] 2026-01-09 10:48:55,461 | INFO     | sum of deviations: -25033463034.521736
[2026-01-09 05:49:57] 2026-01-09 10:48:55,461 | INFO     | mean x: 1767950144.0062113
[2026-01-09 05:49:57] 2026-01-09 10:48:55,461 | INFO     | mean y: 2554602.5217391304
[2026-01-09 05:49:57] 2026-01-09 10:48:55,462 | INFO     | intersect: 34204733780.953854
[2026-01-09 05:49:57] 2026-01-09 10:48:55,462 | INFO     | chi2: 0.1467415689040777
[2026-01-09 05:49:57] 2026-01-09 10:48:55,462 | INFO     | current memory leak: -19.35 B/s (using 161 data points, chi2=0.15)
[2026-01-09 05:49:57] 2026-01-09 10:48:55,462 | INFO     | could have reported an average CPU frequency of 2042 MHz (10 samples)
[2026-01-09 05:49:57] 2026-01-09 10:48:55,463 | INFO     | ..............................
[2026-01-09 05:49:57] 2026-01-09 10:48:55,463 | INFO     | . Timing measurements:
[2026-01-09 05:49:57] 2026-01-09 10:48:55,463 | INFO     | . get job = 0 s
[2026-01-09 05:49:57] 2026-01-09 10:48:55,463 | INFO     | . initial setup = 2 s
[2026-01-09 05:49:57] 2026-01-09 10:48:55,463 | INFO     | . payload setup = 8 s
[2026-01-09 05:49:57] 2026-01-09 10:48:55,463 | INFO     | . stage-in = 0 s
[2026-01-09 05:49:57] 2026-01-09 10:48:55,463 | INFO     | . payload execution = 11680 s
[2026-01-09 05:49:57] 2026-01-09 10:48:55,463 | INFO     | . stage-out = 2 s
[2026-01-09 05:49:57] 2026-01-09 10:48:55,464 | INFO     | . log creation = 0 s
[2026-01-09 05:49:57] 2026-01-09 10:48:55,464 | INFO     | ..............................
[2026-01-09 05:49:57] 2026-01-09 10:48:55,560 | INFO     | 
[2026-01-09 05:49:57] 2026-01-09 10:48:55,561 | INFO     | job summary report
[2026-01-09 05:49:57] 2026-01-09 10:48:55,561 | INFO     | --------------------------------------------------
[2026-01-09 05:49:57] 2026-01-09 10:48:55,561 | INFO     | PanDA job id: 6963186606
[2026-01-09 05:49:57] 2026-01-09 10:48:55,562 | INFO     | task id: 47898826
[2026-01-09 05:49:57] 2026-01-09 10:48:55,562 | INFO     | errors: (none)
[2026-01-09 05:49:57] 2026-01-09 10:48:55,562 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 05:49:57] 2026-01-09 10:48:55,562 | INFO     | pilot state: finished 
[2026-01-09 05:49:57] 2026-01-09 10:48:55,562 | INFO     | transexitcode: 0
[2026-01-09 05:49:57] 2026-01-09 10:48:55,563 | INFO     | exeerrorcode: 0
[2026-01-09 05:49:57] 2026-01-09 10:48:55,563 | INFO     | exeerrordiag: 
[2026-01-09 05:49:57] 2026-01-09 10:48:55,563 | INFO     | exitcode: 0
[2026-01-09 05:49:57] 2026-01-09 10:48:55,563 | INFO     | exitmsg: OK
[2026-01-09 05:49:57] 2026-01-09 10:48:55,563 | INFO     | cpuconsumptiontime: 80477 s
[2026-01-09 05:49:57] 2026-01-09 10:48:55,563 | INFO     | nevents: 400
[2026-01-09 05:49:57] 2026-01-09 10:48:55,564 | INFO     | neventsw: 0
[2026-01-09 05:49:57] 2026-01-09 10:48:55,564 | INFO     | pid: 9219
[2026-01-09 05:49:57] 2026-01-09 10:48:55,564 | INFO     | pgrp: 9219
[2026-01-09 05:49:57] 2026-01-09 10:48:55,564 | INFO     | corecount: 8
[2026-01-09 05:49:57] 2026-01-09 10:48:55,564 | INFO     | event service: False
[2026-01-09 05:49:57] 2026-01-09 10:48:55,565 | INFO     | sizes: {0: 2283971, 6: 2284233, 11: 2284261, 11692: 2313657, 11693: 2313656, 11696: 2322710, 11699: 2322894, 11707: 2323088}
[2026-01-09 05:49:57] 2026-01-09 10:48:55,565 | INFO     | --------------------------------------------------
[2026-01-09 05:49:57] 2026-01-09 10:48:55,565 | INFO     | 
[2026-01-09 05:49:57] 2026-01-09 10:48:55,566 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 05:49:57] 2026-01-09 10:48:55,597 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 05:49:57] 2026-01-09 10:48:55,598 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 05:49:57] 2026-01-09 10:48:55,598 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 05:49:57] 2026-01-09 10:48:55,598 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 05:49:57] 2026-01-09 10:48:55,598 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 05:49:57] 2026-01-09 10:48:55,599 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 05:49:57] 2026-01-09 10:48:55,599 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 05:49:57] 2026-01-09 10:48:55,599 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 05:49:57] 2026-01-09 10:48:55,599 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 05:49:57] 2026-01-09 10:48:55,599 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 05:49:57] 2026-01-09 10:48:55,600 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 05:49:57] 2026-01-09 10:48:55,600 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 05:49:57] 2026-01-09 10:48:55,600 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 05:49:57] 2026-01-09 10:48:55,600 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 05:49:57] 2026-01-09 10:48:55,601 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 05:49:57] 2026-01-09 10:48:55,601 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 05:49:57] 2026-01-09 10:48:55,601 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 05:49:57] 2026-01-09 10:48:55,601 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 05:49:57] 2026-01-09 10:48:55,602 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 05:49:57] 2026-01-09 10:48:55,602 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 05:49:57] 2026-01-09 10:48:55,602 | INFO     | job 6963186606 has completed (purged errors)
[2026-01-09 05:49:57] 2026-01-09 10:48:55,603 | INFO     | overall cleanup function is called
[2026-01-09 05:49:57] 2026-01-09 10:48:56,612 | INFO     | --- collectZombieJob: --- 10, [9219]
[2026-01-09 05:49:57] 2026-01-09 10:48:56,613 | INFO     | zombie collector waiting for pid 9219
[2026-01-09 05:49:57] 2026-01-09 10:48:56,613 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 05:49:57] 2026-01-09 10:48:56,613 | INFO     | collected zombie processes
[2026-01-09 05:49:57] 2026-01-09 10:48:56,613 | INFO     | will attempt to kill all subprocesses of pid=9219
[2026-01-09 05:49:57] 2026-01-09 10:48:56,706 | INFO     | process IDs to be killed: [9219] (in reverse order)
[2026-01-09 05:49:57] 2026-01-09 10:48:56,766 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 05:49:57] 2026-01-09 10:48:56,766 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 05:49:57] 2026-01-09 10:48:56,771 | INFO     | did not find any defunct processes belonging to 9219
[2026-01-09 05:49:57] 2026-01-09 10:48:56,774 | INFO     | did not find any defunct processes belonging to 9219
[2026-01-09 05:49:57] 2026-01-09 10:48:56,774 | INFO     | ready for new job
[2026-01-09 05:49:57] 2026-01-09 10:48:56,774 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 05:49:57] 2026-01-09 10:48:56,777 | INFO     | ***************************************
[2026-01-09 05:49:57] 2026-01-09 10:48:56,777 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 05:49:57] 2026-01-09 10:48:56,777 | INFO     | ***************************************
[2026-01-09 05:49:57] 2026-01-09 10:48:56,777 | INFO     | 
[2026-01-09 05:49:57] 2026-01-09 10:48:56,778 | INFO     | architecture information:
[2026-01-09 05:49:57] 2026-01-09 10:48:56,778 | INFO     | executing command: cat /etc/os-release
[2026-01-09 05:49:57] 2026-01-09 10:48:56,800 | INFO     | cat /etc/os-release:
[2026-01-09 05:49:57] NAME="CentOS Linux"
[2026-01-09 05:49:57] VERSION="7 (Core)"
[2026-01-09 05:49:57] ID="centos"
[2026-01-09 05:49:57] ID_LIKE="rhel fedora"
[2026-01-09 05:49:57] VERSION_ID="7"
[2026-01-09 05:49:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 05:49:57] ANSI_COLOR="0;31"
[2026-01-09 05:49:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 05:49:57] HOME_URL="https://www.centos.org/"
[2026-01-09 05:49:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 05:49:57] 
[2026-01-09 05:49:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 05:49:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 05:49:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 05:49:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 05:49:57] 
[2026-01-09 05:49:57] 2026-01-09 10:48:56,800 | INFO     | ***************************************
[2026-01-09 05:49:57] 2026-01-09 10:48:57,304 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 05:49:57] 2026-01-09 10:48:57,326 | INFO     | sufficient remaining disk space (18536726528 B)
[2026-01-09 05:49:57] 2026-01-09 10:48:57,326 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 05:49:57] 2026-01-09 10:48:57,327 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 05:49:57] 2026-01-09 10:48:57,327 | INFO     | update_server=False
[2026-01-09 05:49:57] 2026-01-09 10:48:57,327 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 05:49:57] 2026-01-09 10:48:57,328 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:49:57] 2026-01-09 10:48:57,328 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 05:49:57] 2026-01-09 10:48:57,328 | INFO     | aborting loop
[2026-01-09 05:49:57] 2026-01-09 10:48:57,331 | INFO     | all payload control threads have been joined
[2026-01-09 05:49:57] 2026-01-09 10:48:57,514 | INFO     | all job control threads have been joined
[2026-01-09 05:49:57] 2026-01-09 10:48:57,717 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 05:49:57] 2026-01-09 10:48:58,098 | INFO     | all data control threads have been joined
[2026-01-09 05:49:57] 2026-01-09 10:48:58,254 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 05:49:57] 2026-01-09 10:48:58,330 | INFO     | [job] job monitor thread has finished
[2026-01-09 05:49:57] 2026-01-09 10:48:58,331 | INFO     | [job] queue monitor thread has finished
[2026-01-09 05:49:57] 2026-01-09 10:48:58,333 | INFO     | [job] retrieve thread has finished
[2026-01-09 05:49:57] 2026-01-09 10:48:58,336 | INFO     | [payload] control thread has finished
[2026-01-09 05:49:57] 2026-01-09 10:48:58,400 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 05:49:57] 2026-01-09 10:48:58,453 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 05:49:57] 2026-01-09 10:48:58,461 | INFO     | [payload] failed_post thread has finished
[2026-01-09 05:49:57] 2026-01-09 10:48:58,516 | INFO     | [job] control thread has finished
[2026-01-09 05:49:57] 2026-01-09 10:48:58,863 | INFO     | [job] validate thread has finished
[2026-01-09 05:49:57] 2026-01-09 10:48:58,923 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 05:49:57] 2026-01-09 10:48:58,998 | INFO     | [data] copytool_in thread has finished
[2026-01-09 05:49:57] 2026-01-09 10:48:59,098 | INFO     | [payload] validate_post thread has finished
[2026-01-09 05:49:57] 2026-01-09 10:48:59,103 | INFO     | [data] control thread has finished
[2026-01-09 05:49:57] 2026-01-09 10:48:59,723 | INFO     | [data] copytool_out thread has finished
[2026-01-09 05:49:57] 2026-01-09 10:49:02,256 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 05:49:57] 2026-01-09 10:49:07,779 | INFO     | job.realtimelogging is not enabled
[2026-01-09 05:49:57] 2026-01-09 10:49:08,784 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 05:49:57] 2026-01-09 10:49:27,789 | INFO     | PID=2779 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 05:49:57] 2026-01-09 10:49:27,790 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 05:49:57] 2026-01-09 10:49:27,790 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 05:49:57] 2026-01-09 10:49:27,790 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 05:49:57] 2026-01-09 10:49:49,971 | INFO     | [monitor] cgroup control has ended
[2026-01-09 05:49:57] 2026-01-09 10:49:51,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140071908505408)>', '<ExcThread(monitor, started 140071449630464)>']
[2026-01-09 05:49:57] 2026-01-09 10:49:51,905 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 05:49:57] 2026-01-09 10:49:51,906 | INFO     | [monitor] control thread has ended
[2026-01-09 05:49:57] 2026-01-09 10:49:56,800 | INFO     | all workflow threads have been joined
[2026-01-09 05:49:57] 2026-01-09 10:49:56,800 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 05:49:57] 2026-01-09 10:49:56,801 | INFO     | traces error code: 0
[2026-01-09 05:49:57] 2026-01-09 10:49:56,801 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 05:49:57] 2026-01-09 10:49:56,933 [wrapper] ==== pilot stdout END ====
[2026-01-09 05:49:57] 2026-01-09 10:49:56,938 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 05:49:57] 2026-01-09 10:49:56,943 [wrapper] pilotpid: 2779
[2026-01-09 05:49:57] 2026-01-09 10:49:56,948 [wrapper] Pilot exit status: 0
[2026-01-09 05:49:57] 2026-01-09 10:49:56,969 [wrapper] pandaids: 6963186606
[2026-01-09 05:49:57] 2026-01-09 10:49:57,029 [wrapper] cleanup supervisor_pilot  1993 2780
[2026-01-09 05:49:57] 2026-01-09 10:49:57,034 [wrapper] Test setup, not cleaning
[2026-01-09 05:49:57] 2026-01-09 10:49:57,039 [wrapper] apfmon messages muted
[2026-01-09 05:49:57] 2026-01-09 10:49:57,045 [wrapper] ==== wrapper stdout END ====
[2026-01-09 05:49:57] 2026-01-09 10:49:57,049 [wrapper] ==== wrapper stderr END ====
[2026-01-09 05:49:57]  *** Error codes and diagnostics ***
[2026-01-09 05:49:57]     "exeErrorCode": 0,
[2026-01-09 05:49:57]     "exeErrorDiag": "",
[2026-01-09 05:49:57]     "pilotErrorCode": 0,
[2026-01-09 05:49:57]     "pilotErrorDiag": "",
[2026-01-09 05:49:57]  *** Listing of results directory ***
[2026-01-09 05:49:57] total 438148
[2026-01-09 05:49:57] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 05:49:57] -rwx------ 1 boincer umatlas     36322 Jan  8 20:01 runpilot2-wrapper.sh
[2026-01-09 05:49:57] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 20:06 queuedata.json
[2026-01-09 05:49:57] -rw-r--r-- 1 boincer umatlas       100 Jan  9 02:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 05:49:57] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 02:33 run_atlas
[2026-01-09 05:49:57] -rw-r--r-- 1 boincer umatlas       105 Jan  9 02:33 job.xml
[2026-01-09 05:49:57] -rw-r--r-- 2 boincer umatlas 223905181 Jan  9 02:33 EVNT.47898824._001402.pool.root.1
[2026-01-09 05:49:57] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 02:33 start_atlas.sh
[2026-01-09 05:49:57] drwxrwx--x 2 boincer umatlas      4096 Jan  9 02:33 shared
[2026-01-09 05:49:57] -rw-r--r-- 2 boincer umatlas    592403 Jan  9 02:33 input.tar.gz
[2026-01-09 05:49:57] -rw-r--r-- 1 boincer umatlas         0 Jan  9 02:33 boinc_lockfile
[2026-01-09 05:49:57] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 02:33 pandaJob.out
[2026-01-09 05:49:57] -rw------- 1 boincer umatlas        57 Jan  9 02:33 setup.sh.local
[2026-01-09 05:49:57] -rw------- 1 boincer umatlas    989771 Jan  9 02:33 agis_schedconf.cvmfs.json
[2026-01-09 05:49:57] drwx------ 5 boincer umatlas      4096 Jan  9 02:33 pilot3
[2026-01-09 05:49:57] -rw------- 1 boincer umatlas 216767158 Jan  9 05:48 HITS.47898826._036582.pool.root.1
[2026-01-09 05:49:57] -rw-r--r-- 1 boincer umatlas       531 Jan  9 05:48 boinc_task_state.xml
[2026-01-09 05:49:57] -rw------- 1 boincer umatlas      1052 Jan  9 05:48 memory_monitor_summary.json
[2026-01-09 05:49:57] -rw-r--r-- 1 boincer umatlas      5910 Jan  9 05:48 init_data.xml
[2026-01-09 05:49:57] -rw------- 1 boincer umatlas   1516240 Jan  9 05:48 agis_ddmendpoints.agis.ALL.json
[2026-01-09 05:49:57] -rw------- 1 boincer umatlas    419926 Jan  9 05:48 log.47898826._036582.job.log.tgz.1
[2026-01-09 05:49:57] -rw------- 1 boincer umatlas      7852 Jan  9 05:48 heartbeat.json
[2026-01-09 05:49:57] -rw------- 1 boincer umatlas        95 Jan  9 05:49 pilot_heartbeat.json
[2026-01-09 05:49:57] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 05:49 boinc_mmap_file
[2026-01-09 05:49:57] -rw-r--r-- 1 boincer umatlas        28 Jan  9 05:49 wrapper_checkpoint.txt
[2026-01-09 05:49:57] -rw------- 1 boincer umatlas      4817 Jan  9 05:49 pilotlog.txt
[2026-01-09 05:49:57] -rw------- 1 boincer umatlas   1617238 Jan  9 05:49 log.47898826._036582.job.log.1
[2026-01-09 05:49:57] -rw------- 1 boincer umatlas       357 Jan  9 05:49 output.list
[2026-01-09 05:49:57] -rw-r--r-- 1 boincer umatlas       620 Jan  9 05:49 runtime_log
[2026-01-09 05:49:57] -rw------- 1 boincer umatlas   2058240 Jan  9 05:49 result.tar.gz
[2026-01-09 05:49:57] -rw-r--r-- 1 boincer umatlas      9338 Jan  9 05:49 runtime_log.err
[2026-01-09 05:49:57] -rw------- 1 boincer umatlas       661 Jan  9 05:49 8OVLDmj3Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmf1lKDm46vjXn.diag
[2026-01-09 05:49:57] -rw-r--r-- 1 boincer umatlas     21149 Jan  9 05:49 stderr.txt
[2026-01-09 05:49:57] HITS file was successfully produced:
[2026-01-09 05:49:57] -rw------- 1 boincer umatlas 216767158 Jan  9 05:48 shared/HITS.pool.root.1
[2026-01-09 05:49:57]  *** Contents of shared directory: ***
[2026-01-09 05:49:57] total 432960
[2026-01-09 05:49:57] -rw-r--r-- 2 boincer umatlas 223905181 Jan  9 02:33 ATLAS.root_0
[2026-01-09 05:49:57] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 02:33 start_atlas.sh
[2026-01-09 05:49:57] -rw-r--r-- 2 boincer umatlas    592403 Jan  9 02:33 input.tar.gz
[2026-01-09 05:49:57] -rw------- 1 boincer umatlas 216767158 Jan  9 05:48 HITS.pool.root.1
[2026-01-09 05:49:57] -rw------- 1 boincer umatlas   2058240 Jan  9 05:49 result.tar.gz
05:49:58 (31402): run_atlas exited; CPU time 80442.292463
05:49:58 (31402): called boinc_finish(0)

</stderr_txt>
]]>

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