Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:26:36 (12748): wrapper (7.7.26015): starting
11:26:36 (12748): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 11:26:36] Arguments: --nthreads 8
[2026-01-09 11:26:36] Threads: 8
[2026-01-09 11:26:36] Checking for CVMFS
[2026-01-09 11:26:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 11:26:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 11:26:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 11:26:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 11:26:36] 2.11.2.0 23910 35294 121680 154940 1 56 15996150 25165825 0 130560 0 15583309 99.795 11486052 3865 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 11:26:36] CVMFS is ok
[2026-01-09 11:26:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 11:26:36] Checking for apptainer binary...
[2026-01-09 11:26:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 11:26:36] Running /usr/bin/apptainer --version
[2026-01-09 11:26:36] apptainer version 1.3.2-1.el7
[2026-01-09 11:26:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 11:26:38] cg-vwn369.simple-grid.lan
[2026-01-09 11:26:38] apptainer works
[2026-01-09 11:26:38] Set ATHENA_PROC_NUMBER=8
[2026-01-09 11:26:38] Set ATHENA_CORE_NUMBER=8
[2026-01-09 11:26:38] Starting ATLAS job with PandaID=6963156180
[2026-01-09 11:26:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 14:12:21]  *** The last 200 lines of the pilot log: ***
[2026-01-09 14:12:21] 2026-01-09 13:11:48,406 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 14:12:21] 2026-01-09 13:11:48,407 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 14:12:21] 2026-01-09 13:11:48,409 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6963156180/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 14:12:21] 2026-01-09 13:11:48,409 | INFO     | extracted standard info from prmon json
[2026-01-09 14:12:21] 2026-01-09 13:11:48,410 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 14:12:21] 2026-01-09 13:11:48,410 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 14:12:21] 2026-01-09 13:11:48,410 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 14:12:21] 2026-01-09 13:11:48,410 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 14:12:21] 2026-01-09 13:11:48,414 | INFO     | fitting pss+swap vs Time
[2026-01-09 14:12:21] 2026-01-09 13:11:48,414 | INFO     | sum of square deviations: 1318277740.5
[2026-01-09 14:12:21] 2026-01-09 13:11:48,416 | INFO     | sum of deviations: -16699956854.500002
[2026-01-09 14:12:21] 2026-01-09 13:11:48,416 | INFO     | mean x: 1767959355.5
[2026-01-09 14:12:21] 2026-01-09 13:11:48,416 | INFO     | mean y: 2520368.722222222
[2026-01-09 14:12:21] 2026-01-09 13:11:48,416 | INFO     | intersect: 22399048846.97853
[2026-01-09 14:12:21] 2026-01-09 13:11:48,416 | INFO     | chi2: 2.449465196329063
[2026-01-09 14:12:21] 2026-01-09 13:11:48,417 | INFO     | sum of square deviations: 1199940638.0
[2026-01-09 14:12:21] 2026-01-09 13:11:48,418 | INFO     | sum of deviations: -5316577793.000011
[2026-01-09 14:12:21] 2026-01-09 13:11:48,418 | INFO     | mean x: 1767959203.0
[2026-01-09 14:12:21] 2026-01-09 13:11:48,418 | INFO     | mean y: 2534693.898089172
[2026-01-09 14:12:21] 2026-01-09 13:11:48,418 | INFO     | intersect: 7835832725.429379
[2026-01-09 14:12:21] 2026-01-09 13:11:48,419 | INFO     | chi2: 1.6884317321512026
[2026-01-09 14:12:21] 2026-01-09 13:11:48,419 | INFO     | current chi2=1.6884317321512026 (change=31.06937242131047 %)
[2026-01-09 14:12:21] 2026-01-09 13:11:48,419 | INFO     | sum of square deviations: 1088905998.0
[2026-01-09 14:12:21] 2026-01-09 13:11:48,420 | INFO     | sum of deviations: -4824296447.0
[2026-01-09 14:12:21] 2026-01-09 13:11:48,420 | INFO     | mean x: 1767959050.5
[2026-01-09 14:12:21] 2026-01-09 13:11:48,421 | INFO     | mean y: 2535370.5
[2026-01-09 14:12:21] 2026-01-09 13:11:48,421 | INFO     | intersect: 7835313022.045862
[2026-01-09 14:12:21] 2026-01-09 13:11:48,421 | INFO     | chi2: 1.6884314813646537
[2026-01-09 14:12:21] 2026-01-09 13:11:48,421 | INFO     | current chi2=1.6884314813646537 (change=1.4853224094615428e-05 %)
[2026-01-09 14:12:21] 2026-01-09 13:11:48,421 | INFO     | right removable region: 151
[2026-01-09 14:12:21] 2026-01-09 13:11:48,422 | INFO     | sum of square deviations: 1199940638.0
[2026-01-09 14:12:21] 2026-01-09 13:11:48,423 | INFO     | sum of deviations: -41273398856.0
[2026-01-09 14:12:21] 2026-01-09 13:11:48,423 | INFO     | mean x: 1767959508.0
[2026-01-09 14:12:21] 2026-01-09 13:11:48,423 | INFO     | mean y: 2551584.585987261
[2026-01-09 14:12:21] 2026-01-09 13:11:48,423 | INFO     | intersect: 60813641420.299614
[2026-01-09 14:12:21] 2026-01-09 13:11:48,424 | INFO     | chi2: 0.9731393958394541
[2026-01-09 14:12:21] 2026-01-09 13:11:48,424 | INFO     | current chi2=0.9731393958394541 (change=60.2713524038689 %)
[2026-01-09 14:12:21] 2026-01-09 13:11:48,424 | INFO     | sum of square deviations: 1088905998.0
[2026-01-09 14:12:21] 2026-01-09 13:11:48,425 | INFO     | sum of deviations: -40277083294.0
[2026-01-09 14:12:21] 2026-01-09 13:11:48,425 | INFO     | mean x: 1767959660.5
[2026-01-09 14:12:21] 2026-01-09 13:11:48,426 | INFO     | mean y: 2550138.3421052634
[2026-01-09 14:12:21] 2026-01-09 13:11:48,426 | INFO     | intersect: 65396862078.196495
[2026-01-09 14:12:21] 2026-01-09 13:11:48,426 | INFO     | chi2: 0.952966747335547
[2026-01-09 14:12:21] 2026-01-09 13:11:48,426 | INFO     | current chi2=0.952966747335547 (change=2.0729454166744192 %)
[2026-01-09 14:12:21] 2026-01-09 13:11:48,426 | INFO     | left removable region: 20
[2026-01-09 14:12:21] 2026-01-09 13:11:48,427 | INFO     | sum of square deviations: 697054930.0
[2026-01-09 14:12:21] 2026-01-09 13:11:48,428 | INFO     | sum of deviations: -18781027090.00001
[2026-01-09 14:12:21] 2026-01-09 13:11:48,428 | INFO     | mean x: 1767959630.0
[2026-01-09 14:12:21] 2026-01-09 13:11:48,428 | INFO     | mean y: 2553194.7862595418
[2026-01-09 14:12:21] 2026-01-09 13:11:48,428 | INFO     | intersect: 47637389813.84065
[2026-01-09 14:12:21] 2026-01-09 13:11:48,429 | INFO     | chi2: 0.14079803929126486
[2026-01-09 14:12:21] 2026-01-09 13:11:48,429 | INFO     | current memory leak: -26.94 B/s (using 131 data points, chi2=0.14)
[2026-01-09 14:12:21] 2026-01-09 13:11:48,429 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 14:12:21] 2026-01-09 13:11:48,429 | INFO     | ..............................
[2026-01-09 14:12:21] 2026-01-09 13:11:48,430 | INFO     | . Timing measurements:
[2026-01-09 14:12:21] 2026-01-09 13:11:48,430 | INFO     | . get job = 0 s
[2026-01-09 14:12:21] 2026-01-09 13:11:48,430 | INFO     | . initial setup = 1 s
[2026-01-09 14:12:21] 2026-01-09 13:11:48,430 | INFO     | . payload setup = 7 s
[2026-01-09 14:12:21] 2026-01-09 13:11:48,430 | INFO     | . stage-in = 0 s
[2026-01-09 14:12:21] 2026-01-09 13:11:48,430 | INFO     | . payload execution = 9856 s
[2026-01-09 14:12:21] 2026-01-09 13:11:48,430 | INFO     | . stage-out = 1 s
[2026-01-09 14:12:21] 2026-01-09 13:11:48,430 | INFO     | . log creation = 0 s
[2026-01-09 14:12:21] 2026-01-09 13:11:48,430 | INFO     | ..............................
[2026-01-09 14:12:21] 2026-01-09 13:11:48,579 | INFO     | 
[2026-01-09 14:12:21] 2026-01-09 13:11:48,579 | INFO     | job summary report
[2026-01-09 14:12:21] 2026-01-09 13:11:48,579 | INFO     | --------------------------------------------------
[2026-01-09 14:12:21] 2026-01-09 13:11:48,579 | INFO     | PanDA job id: 6963156180
[2026-01-09 14:12:21] 2026-01-09 13:11:48,579 | INFO     | task id: 47898826
[2026-01-09 14:12:21] 2026-01-09 13:11:48,579 | INFO     | errors: (none)
[2026-01-09 14:12:21] 2026-01-09 13:11:48,579 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 14:12:21] 2026-01-09 13:11:48,580 | INFO     | pilot state: finished 
[2026-01-09 14:12:21] 2026-01-09 13:11:48,580 | INFO     | transexitcode: 0
[2026-01-09 14:12:21] 2026-01-09 13:11:48,580 | INFO     | exeerrorcode: 0
[2026-01-09 14:12:21] 2026-01-09 13:11:48,580 | INFO     | exeerrordiag: 
[2026-01-09 14:12:21] 2026-01-09 13:11:48,580 | INFO     | exitcode: 0
[2026-01-09 14:12:21] 2026-01-09 13:11:48,580 | INFO     | exitmsg: OK
[2026-01-09 14:12:21] 2026-01-09 13:11:48,580 | INFO     | cpuconsumptiontime: 74903 s
[2026-01-09 14:12:21] 2026-01-09 13:11:48,580 | INFO     | nevents: 400
[2026-01-09 14:12:21] 2026-01-09 13:11:48,580 | INFO     | neventsw: 0
[2026-01-09 14:12:21] 2026-01-09 13:11:48,581 | INFO     | pid: 22934
[2026-01-09 14:12:21] 2026-01-09 13:11:48,581 | INFO     | pgrp: 22934
[2026-01-09 14:12:21] 2026-01-09 13:11:48,581 | INFO     | corecount: 8
[2026-01-09 14:12:21] 2026-01-09 13:11:48,581 | INFO     | event service: False
[2026-01-09 14:12:21] 2026-01-09 13:11:48,581 | INFO     | sizes: {0: 2283140, 1: 2283996, 6: 2284258, 12: 2284286, 9867: 2312600, 9869: 2321598, 9872: 2321782, 9879: 2322040}
[2026-01-09 14:12:21] 2026-01-09 13:11:48,581 | INFO     | --------------------------------------------------
[2026-01-09 14:12:21] 2026-01-09 13:11:48,581 | INFO     | 
[2026-01-09 14:12:21] 2026-01-09 13:11:48,581 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-09 14:12:21] 2026-01-09 13:11:48,606 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 14:12:21] 2026-01-09 13:11:48,606 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 14:12:21] 2026-01-09 13:11:48,607 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 14:12:21] 2026-01-09 13:11:48,607 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 14:12:21] 2026-01-09 13:11:48,607 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 14:12:21] 2026-01-09 13:11:48,607 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 14:12:21] 2026-01-09 13:11:48,607 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 14:12:21] 2026-01-09 13:11:48,607 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 14:12:21] 2026-01-09 13:11:48,607 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 14:12:21] 2026-01-09 13:11:48,607 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 14:12:21] 2026-01-09 13:11:48,608 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 14:12:21] 2026-01-09 13:11:48,608 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 14:12:21] 2026-01-09 13:11:48,608 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 14:12:21] 2026-01-09 13:11:48,608 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 14:12:21] 2026-01-09 13:11:48,608 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 14:12:21] 2026-01-09 13:11:48,608 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 14:12:21] 2026-01-09 13:11:48,608 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 14:12:21] 2026-01-09 13:11:48,608 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 14:12:21] 2026-01-09 13:11:48,608 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 14:12:21] 2026-01-09 13:11:48,608 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 14:12:21] 2026-01-09 13:11:48,609 | INFO     | job 6963156180 has completed (purged errors)
[2026-01-09 14:12:21] 2026-01-09 13:11:48,609 | INFO     | overall cleanup function is called
[2026-01-09 14:12:21] 2026-01-09 13:11:49,195 | INFO     | PID=16504 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 14:12:21] 2026-01-09 13:11:49,617 | INFO     | --- collectZombieJob: --- 10, [22934]
[2026-01-09 14:12:21] 2026-01-09 13:11:49,617 | INFO     | zombie collector waiting for pid 22934
[2026-01-09 14:12:21] 2026-01-09 13:11:49,617 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 14:12:21] 2026-01-09 13:11:49,618 | INFO     | collected zombie processes
[2026-01-09 14:12:21] 2026-01-09 13:11:49,618 | INFO     | will attempt to kill all subprocesses of pid=22934
[2026-01-09 14:12:21] 2026-01-09 13:11:49,678 | INFO     | process IDs to be killed: [22934] (in reverse order)
[2026-01-09 14:12:21] 2026-01-09 13:11:49,722 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 14:12:21] 2026-01-09 13:11:49,722 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 14:12:21] 2026-01-09 13:11:49,724 | INFO     | did not find any defunct processes belonging to 22934
[2026-01-09 14:12:21] 2026-01-09 13:11:49,726 | INFO     | did not find any defunct processes belonging to 22934
[2026-01-09 14:12:21] 2026-01-09 13:11:49,726 | INFO     | ready for new job
[2026-01-09 14:12:21] 2026-01-09 13:11:49,726 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 14:12:21] 2026-01-09 13:11:49,728 | INFO     | ***************************************
[2026-01-09 14:12:21] 2026-01-09 13:11:49,728 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 14:12:21] 2026-01-09 13:11:49,728 | INFO     | ***************************************
[2026-01-09 14:12:21] 2026-01-09 13:11:49,728 | INFO     | 
[2026-01-09 14:12:21] 2026-01-09 13:11:49,729 | INFO     | pilot is running in a VM
[2026-01-09 14:12:21] 2026-01-09 13:11:49,729 | INFO     | architecture information:
[2026-01-09 14:12:21] 2026-01-09 13:11:49,730 | INFO     | executing command: cat /etc/os-release
[2026-01-09 14:12:21] 2026-01-09 13:11:49,747 | INFO     | cat /etc/os-release:
[2026-01-09 14:12:21] NAME="CentOS Linux"
[2026-01-09 14:12:21] VERSION="7 (Core)"
[2026-01-09 14:12:21] ID="centos"
[2026-01-09 14:12:21] ID_LIKE="rhel fedora"
[2026-01-09 14:12:21] VERSION_ID="7"
[2026-01-09 14:12:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 14:12:21] ANSI_COLOR="0;31"
[2026-01-09 14:12:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 14:12:21] HOME_URL="https://www.centos.org/"
[2026-01-09 14:12:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 14:12:21] 
[2026-01-09 14:12:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 14:12:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 14:12:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 14:12:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 14:12:21] 
[2026-01-09 14:12:21] 2026-01-09 13:11:49,747 | INFO     | ***************************************
[2026-01-09 14:12:21] 2026-01-09 13:11:50,250 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-09 14:12:21] 2026-01-09 13:11:50,281 | INFO     | sufficient remaining disk space (498130223104 B)
[2026-01-09 14:12:21] 2026-01-09 13:11:50,282 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 14:12:21] 2026-01-09 13:11:50,282 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 14:12:21] 2026-01-09 13:11:50,282 | INFO     | update_server=False
[2026-01-09 14:12:21] 2026-01-09 13:11:50,282 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 14:12:21] 2026-01-09 13:11:50,283 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:12:21] 2026-01-09 13:11:50,283 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 14:12:21] 2026-01-09 13:11:50,886 | INFO     | all data control threads have been joined
[2026-01-09 14:12:21] 2026-01-09 13:11:50,945 | INFO     | all payload control threads have been joined
[2026-01-09 14:12:21] 2026-01-09 13:11:51,079 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 14:12:21] 2026-01-09 13:11:51,080 | INFO     | aborting loop
[2026-01-09 14:12:21] 2026-01-09 13:11:51,288 | INFO     | [job] retrieve thread has finished
[2026-01-09 14:12:21] 2026-01-09 13:11:51,288 | INFO     | [job] queue monitor thread has finished
[2026-01-09 14:12:21] 2026-01-09 13:11:51,391 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 14:12:21] 2026-01-09 13:11:51,392 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 14:12:21] 2026-01-09 13:11:51,562 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 14:12:21] 2026-01-09 13:11:51,784 | INFO     | all job control threads have been joined
[2026-01-09 14:12:21] 2026-01-09 13:11:51,892 | INFO     | [data] control thread has finished
[2026-01-09 14:12:21] 2026-01-09 13:11:51,949 | INFO     | [payload] control thread has finished
[2026-01-09 14:12:21] 2026-01-09 13:11:52,085 | INFO     | [job] job monitor thread has finished
[2026-01-09 14:12:21] 2026-01-09 13:11:52,202 | INFO     | [payload] failed_post thread has finished
[2026-01-09 14:12:21] 2026-01-09 13:11:52,289 | INFO     | [data] copytool_out thread has finished
[2026-01-09 14:12:21] 2026-01-09 13:11:52,314 | INFO     | [data] copytool_in thread has finished
[2026-01-09 14:12:21] 2026-01-09 13:11:52,510 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 14:12:21] 2026-01-09 13:11:52,511 | INFO     | [job] validate thread has finished
[2026-01-09 14:12:21] 2026-01-09 13:11:52,598 | INFO     | [payload] validate_post thread has finished
[2026-01-09 14:12:21] 2026-01-09 13:11:52,740 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 14:12:21] 2026-01-09 13:11:52,790 | INFO     | [job] control thread has finished
[2026-01-09 14:12:21] 2026-01-09 13:11:56,746 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 14:12:21] 2026-01-09 13:12:00,761 [wrapper] supervise_pilot (15 min periods counter: 12)
[2026-01-09 14:12:21] 2026-01-09 13:12:09,299 | INFO     | [monitor] cgroup control has ended
[2026-01-09 14:12:21] 2026-01-09 13:12:10,305 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139992831772480)>', '<ExcThread(monitor, started 139992152131328)>']
[2026-01-09 14:12:21] 2026-01-09 13:12:15,330 | INFO     | all workflow threads have been joined
[2026-01-09 14:12:21] 2026-01-09 13:12:15,331 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 14:12:21] 2026-01-09 13:12:15,331 | INFO     | traces error code: 0
[2026-01-09 14:12:21] 2026-01-09 13:12:15,331 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 14:12:21] 2026-01-09 13:12:21,277 | INFO     | PID=16504 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 14:12:21] 2026-01-09 13:12:21,278 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 14:12:21] 2026-01-09 13:12:21,278 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 14:12:21] 2026-01-09 13:12:21,279 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 14:12:21] 2026-01-09 13:12:21,279 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 14:12:21] 2026-01-09 13:12:21,279 | INFO     | [monitor] control thread has ended
[2026-01-09 14:12:21] 2026-01-09 13:12:21,420 [wrapper] ==== pilot stdout END ====
[2026-01-09 14:12:21] 2026-01-09 13:12:21,424 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 14:12:21] 2026-01-09 13:12:21,428 [wrapper] pilotpid: 16504
[2026-01-09 14:12:21] 2026-01-09 13:12:21,431 [wrapper] Pilot exit status: 0
[2026-01-09 14:12:21] 2026-01-09 13:12:21,446 [wrapper] pandaids: 6963156180
[2026-01-09 14:12:21] 2026-01-09 13:12:21,481 [wrapper] cleanup supervisor_pilot 11840 16505
[2026-01-09 14:12:21] 2026-01-09 13:12:21,485 [wrapper] Test setup, not cleaning
[2026-01-09 14:12:21] 2026-01-09 13:12:21,488 [wrapper] apfmon messages muted
[2026-01-09 14:12:21] 2026-01-09 13:12:21,491 [wrapper] ==== wrapper stdout END ====
[2026-01-09 14:12:21] 2026-01-09 13:12:21,495 [wrapper] ==== wrapper stderr END ====
[2026-01-09 14:12:21]  *** Error codes and diagnostics ***
[2026-01-09 14:12:21]     "exeErrorCode": 0,
[2026-01-09 14:12:21]     "exeErrorDiag": "",
[2026-01-09 14:12:21]     "pilotErrorCode": 0,
[2026-01-09 14:12:21]     "pilotErrorDiag": "",
[2026-01-09 14:12:21]  *** Listing of results directory ***
[2026-01-09 14:12:21] total 437672
[2026-01-09 14:12:21] -rw-r--r--. 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-09 14:12:21] -rwx------. 1 boinc boinc     36322 Jan  8 20:07 runpilot2-wrapper.sh
[2026-01-09 14:12:21] -rw-r--r--. 1 boinc boinc      5112 Jan  8 20:07 queuedata.json
[2026-01-09 14:12:21] -rw-r--r--. 1 boinc boinc       100 Jan  9 11:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 14:12:21] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 11:26 run_atlas
[2026-01-09 14:12:21] -rw-r--r--. 1 boinc boinc       105 Jan  9 11:26 job.xml
[2026-01-09 14:12:21] -rw-r--r--. 1 boinc boinc      6389 Jan  9 11:26 init_data.xml
[2026-01-09 14:12:21] -rw-r--r--. 2 boinc boinc 224085119 Jan  9 11:26 EVNT.47898824._000894.pool.root.1
[2026-01-09 14:12:21] -rw-r--r--. 2 boinc boinc     15847 Jan  9 11:26 start_atlas.sh
[2026-01-09 14:12:21] drwxrwx--x. 2 boinc boinc        68 Jan  9 11:26 shared
[2026-01-09 14:12:21] -rw-r--r--. 2 boinc boinc    592394 Jan  9 11:26 input.tar.gz
[2026-01-09 14:12:21] -rw-r--r--. 1 boinc boinc         0 Jan  9 11:26 boinc_lockfile
[2026-01-09 14:12:21] -rw-r--r--. 1 boinc boinc      2518 Jan  9 11:26 pandaJob.out
[2026-01-09 14:12:21] -rw-------. 1 boinc boinc    989369 Jan  9 11:26 agis_schedconf.cvmfs.json
[2026-01-09 14:12:21] -rw-------. 1 boinc boinc   1516240 Jan  9 11:26 agis_ddmendpoints.agis.ALL.json
[2026-01-09 14:12:21] drwx------. 5 boinc boinc      4096 Jan  9 11:26 pilot3
[2026-01-09 14:12:21] -rw-------. 1 boinc boinc 216759801 Jan  9 14:10 HITS.47898826._031357.pool.root.1
[2026-01-09 14:12:21] -rw-r--r--. 1 boinc boinc       530 Jan  9 14:11 boinc_task_state.xml
[2026-01-09 14:12:21] -rw-------. 1 boinc boinc      1013 Jan  9 14:11 memory_monitor_summary.json
[2026-01-09 14:12:21] -rw-------. 1 boinc boinc    389101 Jan  9 14:11 log.47898826._031357.job.log.tgz.1
[2026-01-09 14:12:21] -rw-r--r--. 1 boinc boinc      8192 Jan  9 14:11 boinc_mmap_file
[2026-01-09 14:12:21] -rw-r--r--. 1 boinc boinc        27 Jan  9 14:11 wrapper_checkpoint.txt
[2026-01-09 14:12:21] -rw-------. 1 boinc boinc      7773 Jan  9 14:11 heartbeat.json
[2026-01-09 14:12:21] -rw-------. 1 boinc boinc        95 Jan  9 14:12 pilot_heartbeat.json
[2026-01-09 14:12:21] -rw-------. 1 boinc boinc       745 Jan  9 14:12 pilotlog.txt
[2026-01-09 14:12:21] -rw-------. 1 boinc boinc   1329975 Jan  9 14:12 log.47898826._031357.job.log.1
[2026-01-09 14:12:21] -rw-------. 1 boinc boinc       357 Jan  9 14:12 output.list
[2026-01-09 14:12:21] -rw-r--r--. 1 boinc boinc       620 Jan  9 14:12 runtime_log
[2026-01-09 14:12:21] -rw-------. 1 boinc boinc   1740800 Jan  9 14:12 result.tar.gz
[2026-01-09 14:12:21] -rw-r--r--. 1 boinc boinc      8816 Jan  9 14:12 runtime_log.err
[2026-01-09 14:12:21] -rw-------. 1 boinc boinc       653 Jan  9 14:12 I3VNDmhWAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUFlKDmzNnkHn.diag
[2026-01-09 14:12:21] -rw-r--r--. 1 boinc boinc     20816 Jan  9 14:12 stderr.txt
[2026-01-09 14:12:21] HITS file was successfully produced:
[2026-01-09 14:12:21] -rw-------. 1 boinc boinc 216759801 Jan  9 14:10 shared/HITS.pool.root.1
[2026-01-09 14:12:21]  *** Contents of shared directory: ***
[2026-01-09 14:12:21] total 432812
[2026-01-09 14:12:21] -rw-r--r--. 2 boinc boinc 224085119 Jan  9 11:26 ATLAS.root_0
[2026-01-09 14:12:21] -rw-r--r--. 2 boinc boinc     15847 Jan  9 11:26 start_atlas.sh
[2026-01-09 14:12:21] -rw-r--r--. 2 boinc boinc    592394 Jan  9 11:26 input.tar.gz
[2026-01-09 14:12:21] -rw-------. 1 boinc boinc 216759801 Jan  9 14:10 HITS.pool.root.1
[2026-01-09 14:12:21] -rw-------. 1 boinc boinc   1740800 Jan  9 14:12 result.tar.gz
14:12:22 (12748): run_atlas exited; CPU time 74970.157937
14:12:22 (12748): called boinc_finish(0)

</stderr_txt>
]]>

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