Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:44:13 (2317614): wrapper (7.7.26015): starting
23:44:13 (2317614): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 23:44:13] Arguments: --nthreads 8
[2026-01-08 23:44:13] Threads: 8
[2026-01-08 23:44:13] Checking for CVMFS
[2026-01-08 23:44:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 23:44:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 23:44:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 23:44:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 23:44:13] 2.11.3.0 605697 56385 209444 154936 0 388 29192307 45568001 12706 130560 0 257579381 99.744 185067754 20261 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-08 23:44:13] CVMFS is ok
[2026-01-08 23:44:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 23:44:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 23:44:13] Further information can be found at the LHC@home message board.
[2026-01-08 23:44:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 23:44:13] Checking for apptainer binary...
[2026-01-08 23:44:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 23:44:13] Running /usr/bin/apptainer --version
[2026-01-08 23:44:13] apptainer version 1.4.1-1.el9
[2026-01-08 23:44:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 23:44:13] wns0008.triumf.lcg
[2026-01-08 23:44:13] apptainer works
[2026-01-08 23:44:13] Set ATHENA_PROC_NUMBER=8
[2026-01-08 23:44:13] Set ATHENA_CORE_NUMBER=8
[2026-01-08 23:44:13] Starting ATLAS job with PandaID=6963186712
[2026-01-08 23:44:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 23:47:33]  *** The last 200 lines of the pilot log: ***
[2026-01-08 23:47:33] 2026-01-09 07:47:00,837 | WARNING  | found no stored workdir sizes
[2026-01-08 23:47:33] 2026-01-09 07:47:00,837 | INFO     | will not add max space = 0 B to job metrics
[2026-01-08 23:47:33] 2026-01-09 07:47:00,838 | WARNING  | wrong length of table data, x=[1767944686.0], y=[1004.0] (must be same and length>=4)
[2026-01-08 23:47:33] 2026-01-09 07:47:00,838 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-08 23:47:33] 2026-01-09 07:47:00,838 | INFO     | ..............................
[2026-01-08 23:47:33] 2026-01-09 07:47:00,838 | INFO     | . Timing measurements:
[2026-01-08 23:47:33] 2026-01-09 07:47:00,838 | INFO     | . get job = 0 s
[2026-01-08 23:47:33] 2026-01-09 07:47:00,838 | INFO     | . initial setup = 2 s
[2026-01-08 23:47:33] 2026-01-09 07:47:00,838 | INFO     | . payload setup = 4 s
[2026-01-08 23:47:33] 2026-01-09 07:47:00,838 | INFO     | . stage-in = 0 s
[2026-01-08 23:47:33] 2026-01-09 07:47:00,839 | INFO     | . payload execution = 16 s
[2026-01-08 23:47:33] 2026-01-09 07:47:00,839 | INFO     | . stage-out = 0 s
[2026-01-08 23:47:33] 2026-01-09 07:47:00,839 | INFO     | . log creation = 0 s
[2026-01-08 23:47:33] 2026-01-09 07:47:00,839 | INFO     | ..............................
[2026-01-08 23:47:33] 2026-01-09 07:47:00,839 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 23:47:33] 2026-01-09 07:47:00,839 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963186712/pilotlog.txt
[2026-01-08 23:47:33] 2026-01-09 07:47:00,851 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-08 23:47:33] - Log from pilotlog.txt -
[2026-01-08 23:47:33] 2026-01-09 07:47:00,837 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 23:47:33] 2026-01-09 07:47:00,837 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 23:47:33] 2026-01-09 07:47:00,837 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 23:47:33] 2026-01-09 07:47:00,837 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 23:47:33] 2026-01-09 07:47:00,837 | WARNING  | found no stored workdir sizes
[2026-01-08 23:47:33] 2026-01-09 07:47:00,837 | INFO     | will not add max space = 0 B to job metrics
[2026-01-08 23:47:33] 2026-01-09 07:47:00,838 | WARNING  | wrong length of table data, x=[1767944686.0], y=[1004.0] (must be same and length>=4)
[2026-01-08 23:47:33] 2026-01-09 07:47:00,838 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-08 23:47:33] 2026-01-09 07:47:00,838 | INFO     | ..............................
[2026-01-08 23:47:33] 2026-01-09 07:47:00,838 | INFO     | . Timing measurements:
[2026-01-08 23:47:33] 2026-01-09 07:47:00,838 | INFO     | . get job = 0 s
[2026-01-08 23:47:33] 2026-01-09 07:47:00,838 | INFO     | . initial setup = 2 s
[2026-01-08 23:47:33] 2026-01-09 07:47:00,838 | INFO     | . payload setup = 4 s
[2026-01-08 23:47:33] 2026-01-09 07:47:00,838 | INFO     | . stage-in = 0 s
[2026-01-08 23:47:33] 2026-01-09 07:47:00,839 | INFO     | . payload execution = 16 s
[2026-01-08 23:47:33] 2026-01-09 07:47:00,839 | INFO     | . stage-out = 0 s
[2026-01-08 23:47:33] 2026-01-09 07:47:00,839 | INFO     | . log creation = 0 s
[2026-01-08 23:47:33] 2026-01-09 07:47:00,839 | INFO     | ..............................
[2026-01-08 23:47:33] 2026-01-09 07:47:00,839 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 23:47:33] 2026-01-09 07:47:00,839 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963186712/pilotlog.txt
[2026-01-08 23:47:33] 2026-01-09 07:47:00,852 | WARNING  | 
[2026-01-08 23:47:33] [begin log extracts]
[2026-01-08 23:47:33] - Log from pilotlog.txt -
[2026-01-08 23:47:33] 2026-01-09 07:47:00,837 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 23:47:33] 2026-01-09 07:47:00,837 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 23:47:33] 2026-01-09 07:47:00,837 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 23:47:33] 2026-01-09 07:47:00,837 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 23:47:33] 2026-01-09 07:47:00,837 | WARNING  | found no stored workdir sizes
[2026-01-08 23:47:33] 2026-01-09 07:47:00,837 | INFO     | will not add max space = 0 B to job metrics
[2026-01-08 23:47:33] 2026-01-09 07:47:00,838 | WARNING  | wrong length of table data, x=[1767944686.0], y=[1004.0] (must be same and length>=4)
[2026-01-08 23:47:33] 2026-01-09 07:47:00,838 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-01-08 23:47:33] 2026-01-09 07:47:00,838 | INFO     | ..............................
[2026-01-08 23:47:33] 2026-01-09 07:47:00,838 | INFO     | . Timing measurements:
[2026-01-08 23:47:33] 2026-01-09 07:47:00,838 | INFO     | . get job = 0 s
[2026-01-08 23:47:33] 2026-01-09 07:47:00,838 | INFO     | . initial setup = 2 s
[2026-01-08 23:47:33] 2026-01-09 07:47:00,838 | INFO     | . payload setup = 4 s
[2026-01-08 23:47:33] 2026-01-09 07:47:00,838 | INFO     | . stage-in = 0 s
[2026-01-08 23:47:33] 2026-01-09 07:47:00,839 | INFO     | . payload execution = 16 s
[2026-01-08 23:47:33] 2026-01-09 07:47:00,839 | INFO     | . stage-out = 0 s
[2026-01-08 23:47:33] 2026-01-09 07:47:00,839 | INFO     | . log creation = 0 s
[2026-01-08 23:47:33] 2026-01-09 07:47:00,839 | INFO     | ..............................
[2026-01-08 23:47:33] 2026-01-09 07:47:00,839 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 23:47:33] 2026-01-09 07:47:00,839 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963186712/pilotlog.txt
[2026-01-08 23:47:33] [end log extracts]
[2026-01-08 23:47:33] 2026-01-09 07:47:00,852 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-08 23:47:33] 2026-01-09 07:47:00,853 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-08 23:47:33] 2026-01-09 07:47:00,926 | INFO     | 
[2026-01-08 23:47:33] 2026-01-09 07:47:00,926 | INFO     | job summary report
[2026-01-08 23:47:33] 2026-01-09 07:47:00,926 | INFO     | --------------------------------------------------
[2026-01-08 23:47:33] 2026-01-09 07:47:00,926 | INFO     | PanDA job id: 6963186712
[2026-01-08 23:47:33] 2026-01-09 07:47:00,927 | INFO     | task id: 47898826
[2026-01-08 23:47:33] 2026-01-09 07:47:00,927 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-08 23:44:54,060 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-08 23:47:33] 2026-01-09 07:47:00,927 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 23:47:33] 2026-01-09 07:47:00,927 | INFO     | pilot state: failed 
[2026-01-08 23:47:33] 2026-01-09 07:47:00,927 | INFO     | transexitcode: 65
[2026-01-08 23:47:33] 2026-01-09 07:47:00,927 | INFO     | exeerrorcode: 65
[2026-01-08 23:47:33] 2026-01-09 07:47:00,928 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 23:47:33] 2026-01-09 07:47:00,928 | INFO     | exitcode: 65
[2026-01-08 23:47:33] 2026-01-09 07:47:00,928 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 23:47:33] 2026-01-09 07:47:00,928 | INFO     | cpuconsumptiontime: 18 s
[2026-01-08 23:47:33] 2026-01-09 07:47:00,928 | INFO     | nevents: 0
[2026-01-08 23:47:33] 2026-01-09 07:47:00,929 | INFO     | neventsw: 0
[2026-01-08 23:47:33] 2026-01-09 07:47:00,929 | INFO     | pid: 2327825
[2026-01-08 23:47:33] 2026-01-09 07:47:00,929 | INFO     | pgrp: 2327825
[2026-01-08 23:47:33] 2026-01-09 07:47:00,929 | INFO     | corecount: 8
[2026-01-08 23:47:33] 2026-01-09 07:47:00,929 | INFO     | event service: False
[2026-01-08 23:47:33] 2026-01-09 07:47:00,929 | INFO     | sizes: {0: 2283968, 3: 2284230, 11: 2284258, 24: 2311763, 25: 2311763, 144: 2311929}
[2026-01-08 23:47:33] 2026-01-09 07:47:00,929 | INFO     | --------------------------------------------------
[2026-01-08 23:47:33] 2026-01-09 07:47:00,929 | INFO     | 
[2026-01-08 23:47:33] 2026-01-09 07:47:00,929 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-08 23:47:33] 2026-01-09 07:47:00,944 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 23:47:33] 2026-01-09 07:47:00,945 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 23:47:33] 2026-01-09 07:47:00,945 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 23:47:33] 2026-01-09 07:47:00,945 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 23:47:33] 2026-01-09 07:47:00,945 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 23:47:33] 2026-01-09 07:47:00,945 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 23:47:33] 2026-01-09 07:47:00,945 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 23:47:33] 2026-01-09 07:47:00,945 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 23:47:33] 2026-01-09 07:47:00,945 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 23:47:33] 2026-01-09 07:47:00,945 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 23:47:33] 2026-01-09 07:47:00,945 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 23:47:33] 2026-01-09 07:47:00,945 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 23:47:33] 2026-01-09 07:47:00,945 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 23:47:33] 2026-01-09 07:47:00,945 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 23:47:33] 2026-01-09 07:47:00,946 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 23:47:33] 2026-01-09 07:47:00,946 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 23:47:33] 2026-01-09 07:47:00,946 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 23:47:33] 2026-01-09 07:47:00,946 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 23:47:33] 2026-01-09 07:47:00,946 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 23:47:33] 2026-01-09 07:47:00,946 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 23:47:33] 2026-01-09 07:47:00,946 | INFO     | job 6963186712 has completed (purged errors)
[2026-01-08 23:47:33] 2026-01-09 07:47:00,946 | INFO     | overall cleanup function is called
[2026-01-08 23:47:33] 2026-01-09 07:47:01,952 | INFO     | --- collectZombieJob: --- 10, [2327825]
[2026-01-08 23:47:33] 2026-01-09 07:47:01,953 | INFO     | zombie collector waiting for pid 2327825
[2026-01-08 23:47:33] 2026-01-09 07:47:01,953 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 23:47:33] 2026-01-09 07:47:01,953 | INFO     | collected zombie processes
[2026-01-08 23:47:33] 2026-01-09 07:47:01,953 | INFO     | will attempt to kill all subprocesses of pid=2327825
[2026-01-08 23:47:33] 2026-01-09 07:47:02,145 | INFO     | process IDs to be killed: [2327825] (in reverse order)
[2026-01-08 23:47:33] 2026-01-09 07:47:02,206 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 23:47:33] 2026-01-09 07:47:02,206 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 23:47:33] 2026-01-09 07:47:02,213 | INFO     | did not find any defunct processes belonging to 2327825
[2026-01-08 23:47:33] 2026-01-09 07:47:02,219 | INFO     | did not find any defunct processes belonging to 2327825
[2026-01-08 23:47:33] 2026-01-09 07:47:02,220 | INFO     | ready for new job
[2026-01-08 23:47:33] 2026-01-09 07:47:02,220 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 23:47:33] 2026-01-09 07:47:02,221 | INFO     | ***************************************
[2026-01-08 23:47:33] 2026-01-09 07:47:02,221 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 23:47:33] 2026-01-09 07:47:02,221 | INFO     | ***************************************
[2026-01-08 23:47:33] 2026-01-09 07:47:02,221 | INFO     | 
[2026-01-08 23:47:33] 2026-01-09 07:47:02,223 | INFO     | architecture information:
[2026-01-08 23:47:33] 2026-01-09 07:47:02,223 | INFO     | executing command: cat /etc/os-release
[2026-01-08 23:47:33] 2026-01-09 07:47:02,234 | INFO     | cat /etc/os-release:
[2026-01-08 23:47:33] NAME="CentOS Linux"
[2026-01-08 23:47:33] VERSION="7 (Core)"
[2026-01-08 23:47:33] ID="centos"
[2026-01-08 23:47:33] ID_LIKE="rhel fedora"
[2026-01-08 23:47:33] VERSION_ID="7"
[2026-01-08 23:47:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 23:47:33] ANSI_COLOR="0;31"
[2026-01-08 23:47:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 23:47:33] HOME_URL="https://www.centos.org/"
[2026-01-08 23:47:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 23:47:33] 
[2026-01-08 23:47:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 23:47:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 23:47:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 23:47:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 23:47:33] 
[2026-01-08 23:47:33] 2026-01-09 07:47:02,234 | INFO     | ***************************************
[2026-01-08 23:47:33] 2026-01-09 07:47:02,737 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-08 23:47:33] 2026-01-09 07:47:02,750 | INFO     | sufficient remaining disk space (890900578304 B)
[2026-01-08 23:47:33] 2026-01-09 07:47:02,751 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 23:47:33] 2026-01-09 07:47:02,751 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 23:47:33] 2026-01-09 07:47:02,751 | INFO     | update_server=False
[2026-01-08 23:47:33] 2026-01-09 07:47:02,751 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 23:47:33] 2026-01-09 07:47:02,751 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 23:47:33] 2026-01-09 07:47:02,751 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:47:33] 2026-01-09 07:47:03,023 | INFO     | all job control threads have been joined
[2026-01-08 23:47:33] 2026-01-09 07:47:03,514 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:47:33] 2026-01-09 07:47:03,515 | INFO     | aborting loop
[2026-01-08 23:47:33] 2026-01-09 07:47:03,602 | INFO     | all payload control threads have been joined
[2026-01-08 23:47:33] 2026-01-09 07:47:03,687 | INFO     | all data control threads have been joined
[2026-01-08 23:47:33] 2026-01-09 07:47:03,756 | INFO     | [job] retrieve thread has finished
[2026-01-08 23:47:33] 2026-01-09 07:47:03,756 | INFO     | [job] queue monitor thread has finished
[2026-01-08 23:47:33] 2026-01-09 07:47:03,976 | INFO     | [data] copytool_in thread has finished
[2026-01-08 23:47:33] 2026-01-09 07:47:04,028 | INFO     | [job] control thread has finished
[2026-01-08 23:47:33] 2026-01-09 07:47:04,043 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 23:47:33] 2026-01-09 07:47:04,255 | INFO     | [payload] failed_post thread has finished
[2026-01-08 23:47:33] 2026-01-09 07:47:04,520 | INFO     | [job] job monitor thread has finished
[2026-01-08 23:47:33] 2026-01-09 07:47:04,607 | INFO     | [payload] control thread has finished
[2026-01-08 23:47:33] 2026-01-09 07:47:04,692 | INFO     | [data] control thread has finished
[2026-01-08 23:47:33] 2026-01-09 07:47:04,758 | INFO     | [data] copytool_out thread has finished
[2026-01-08 23:47:33] 2026-01-09 07:47:04,781 | INFO     | [job] validate thread has finished
[2026-01-08 23:47:33] 2026-01-09 07:47:04,853 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 23:47:33] 2026-01-09 07:47:04,968 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 23:47:33] 2026-01-09 07:47:05,104 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 23:47:33] 2026-01-09 07:47:05,160 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 23:47:33] 2026-01-09 07:47:05,186 | INFO     | [payload] validate_post thread has finished
[2026-01-08 23:47:33] 2026-01-09 07:47:08,859 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 23:47:33] 2026-01-09 07:47:22,533 | INFO     | [monitor] cgroup control has ended
[2026-01-08 23:47:33] 2026-01-09 07:47:24,267 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140592019404608)>', '<ExcThread(monitor, started 140591618828032)>']
[2026-01-08 23:47:33] 2026-01-09 07:47:29,292 | INFO     | all workflow threads have been joined
[2026-01-08 23:47:33] 2026-01-09 07:47:29,293 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 23:47:33] 2026-01-09 07:47:29,293 | INFO     | traces error code: 0
[2026-01-08 23:47:33] 2026-01-09 07:47:29,293 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 23:47:33] 2026-01-09 07:47:32,910 | INFO     | PID=2321287 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 23:47:33] 2026-01-09 07:47:32,911 | INFO     | .. there are 25 such processes running
[2026-01-08 23:47:33] 2026-01-09 07:47:32,913 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 23:47:33] 2026-01-09 07:47:32,913 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 23:47:33] 2026-01-09 07:47:32,913 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 23:47:33] 2026-01-09 07:47:32,913 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 23:47:33] 2026-01-09 07:47:32,913 | CRITICAL | thread 'MainThread' is not alive
[2026-01-08 23:47:33] 2026-01-09 07:47:32,913 | INFO     | [monitor] control thread has ended
[2026-01-08 23:47:33] 2026-01-09 07:47:33,041 [wrapper] ==== pilot stdout END ====
[2026-01-08 23:47:33] 2026-01-09 07:47:33,043 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 23:47:33] 2026-01-09 07:47:33,044 [wrapper] pilotpid: 2321287
[2026-01-08 23:47:33] 2026-01-09 07:47:33,046 [wrapper] Pilot exit status: 0
[2026-01-08 23:47:33] 2026-01-09 07:47:33,053 [wrapper] pandaids: 6963186712
[2026-01-08 23:47:33] 2026-01-09 07:47:33,090 [wrapper] cleanup supervisor_pilot 2321293 2321288
[2026-01-08 23:47:33] 2026-01-09 07:47:33,092 [wrapper] Test setup, not cleaning
[2026-01-08 23:47:33] 2026-01-09 07:47:33,094 [wrapper] apfmon messages muted
[2026-01-08 23:47:33] 2026-01-09 07:47:33,096 [wrapper] ==== wrapper stdout END ====
[2026-01-08 23:47:33] 2026-01-09 07:47:33,097 [wrapper] ==== wrapper stderr END ====
[2026-01-08 23:47:33]  *** Error codes and diagnostics ***
[2026-01-08 23:47:33]     "exeErrorCode": 65,
[2026-01-08 23:47:33]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 23:47:33]     "pilotErrorCode": 1305,
[2026-01-08 23:47:33]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 23:47:33]  *** Listing of results directory ***
[2026-01-08 23:47:33] total 222380
[2026-01-08 23:47:33] -rwx------. 1 boinc boinc     36322 Jan  8 17:01 runpilot2-wrapper.sh
[2026-01-08 23:47:33] -rw-r--r--. 1 boinc boinc    579449 Jan  8 17:06 pilot3.tar.gz
[2026-01-08 23:47:33] -rw-r--r--. 1 boinc boinc      5112 Jan  8 17:06 queuedata.json
[2026-01-08 23:47:33] -rw-r--r--. 1 boinc boinc       100 Jan  8 23:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 23:47:33] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 23:44 run_atlas
[2026-01-08 23:47:33] -rw-r--r--. 1 boinc boinc       105 Jan  8 23:44 job.xml
[2026-01-08 23:47:33] -rw-r--r--. 1 boinc boinc      6443 Jan  8 23:44 init_data.xml
[2026-01-08 23:47:33] -rw-r--r--. 2 boinc boinc 223607282 Jan  8 23:44 EVNT.47898824._001406.pool.root.1
[2026-01-08 23:47:33] -rw-r--r--. 2 boinc boinc     15847 Jan  8 23:44 start_atlas.sh
[2026-01-08 23:47:33] drwxrwx--x. 2 boinc boinc      4096 Jan  8 23:44 shared
[2026-01-08 23:47:33] -rw-r--r--. 2 boinc boinc    592406 Jan  8 23:44 input.tar.gz
[2026-01-08 23:47:33] -rw-r--r--. 1 boinc boinc         0 Jan  8 23:44 boinc_lockfile
[2026-01-08 23:47:33] -rw-r--r--. 1 boinc boinc      2520 Jan  8 23:44 pandaJob.out
[2026-01-08 23:47:33] -rw-------. 1 boinc boinc    989771 Jan  8 23:44 agis_schedconf.cvmfs.json
[2026-01-08 23:47:33] -rw-------. 1 boinc boinc   1516240 Jan  8 23:44 agis_ddmendpoints.agis.ALL.json
[2026-01-08 23:47:33] drwx------. 5 boinc boinc      4096 Jan  8 23:44 pilot3
[2026-01-08 23:47:33] -rw-------. 1 boinc boinc       943 Jan  8 23:44 memory_monitor_summary.json
[2026-01-08 23:47:33] -rw-r--r--. 1 boinc boinc       522 Jan  8 23:44 boinc_task_state.xml
[2026-01-08 23:47:33] -rw-------. 1 boinc boinc     20675 Jan  8 23:45 log.47898826._036688.job.log.tgz.1
[2026-01-08 23:47:33] -rw-------. 1 boinc boinc      8382 Jan  8 23:47 heartbeat.json
[2026-01-08 23:47:33] -rw-r--r--. 1 boinc boinc      8192 Jan  8 23:47 boinc_mmap_file
[2026-01-08 23:47:33] -rw-r--r--. 1 boinc boinc        22 Jan  8 23:47 wrapper_checkpoint.txt
[2026-01-08 23:47:33] -rw-------. 1 boinc boinc        95 Jan  8 23:47 pilot_heartbeat.json
[2026-01-08 23:47:33] -rw-------. 1 boinc boinc       893 Jan  8 23:47 pilotlog.txt
[2026-01-08 23:47:33] -rw-------. 1 boinc boinc     81416 Jan  8 23:47 log.47898826._036688.job.log.1
[2026-01-08 23:47:33] -rw-------. 1 boinc boinc       188 Jan  8 23:47 output.list
[2026-01-08 23:47:33] -rw-r--r--. 1 boinc boinc       620 Jan  8 23:47 runtime_log
[2026-01-08 23:47:33] -rw-------. 1 boinc boinc    122880 Jan  8 23:47 result.tar.gz
[2026-01-08 23:47:33] -rw-r--r--. 1 boinc boinc      8634 Jan  8 23:47 runtime_log.err
[2026-01-08 23:47:33] -rw-------. 1 boinc boinc       644 Jan  8 23:47 gXjMDmj3Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmX2lKDmWYa51m.diag
[2026-01-08 23:47:33] -rw-r--r--. 1 boinc boinc     21608 Jan  8 23:47 stderr.txt
[2026-01-08 23:47:33] No HITS result produced
[2026-01-08 23:47:33]  *** Contents of shared directory: ***
[2026-01-08 23:47:33] total 219084
[2026-01-08 23:47:33] -rw-r--r--. 2 boinc boinc 223607282 Jan  8 23:44 ATLAS.root_0
[2026-01-08 23:47:33] -rw-r--r--. 2 boinc boinc     15847 Jan  8 23:44 start_atlas.sh
[2026-01-08 23:47:33] -rw-r--r--. 2 boinc boinc    592406 Jan  8 23:44 input.tar.gz
[2026-01-08 23:47:33] -rw-------. 1 boinc boinc    122880 Jan  8 23:47 result.tar.gz
23:47:34 (2317614): run_atlas exited; CPU time 23.406840
23:47:34 (2317614): called boinc_finish(0)

</stderr_txt>
]]>

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