Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-10 23:41:15 (10076): vboxwrapper version 26210
2026-01-10 23:41:15 (10076): BOINC client version: 8.2.4
2026-01-10 23:41:17 (10076): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2026-01-10 23:41:17 (10076): Successfully copied 'init_data.xml' to the shared directory.
2026-01-10 23:41:17 (10076): Create VM. (boinc_f450861caa2fd552, slot#1)
2026-01-10 23:41:18 (10076): Setting Memory Size for VM. (4400MB)
2026-01-10 23:41:18 (10076): Setting CPU Count for VM. (4)
2026-01-10 23:41:18 (10076): Setting Chipset Options for VM.
2026-01-10 23:41:19 (10076): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-10 23:41:19 (10076): Setting Boot Options for VM.
2026-01-10 23:41:20 (10076): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-10 23:41:20 (10076): Enabling VM Network Access.
2026-01-10 23:41:20 (10076): Disabling USB Support for VM.
2026-01-10 23:41:20 (10076): Disabling COM Port Support for VM.
2026-01-10 23:41:21 (10076): Disabling LPT Port Support for VM.
2026-01-10 23:41:21 (10076): Disabling Audio Support for VM.
2026-01-10 23:41:21 (10076): Disabling Clipboard Support for VM.
2026-01-10 23:41:21 (10076): Disabling Drag and Drop Support for VM.
2026-01-10 23:41:22 (10076): Adding storage controller(s) to VM.
2026-01-10 23:41:22 (10076): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-10 23:41:24 (10076): Adding VirtualBox Guest Additions to VM.
2026-01-10 23:41:24 (10076): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-10 23:41:25 (10076): forwarding host port 65400 to guest port 80
2026-01-10 23:41:25 (10076): Enabling remote desktop for VM.
2026-01-10 23:41:25 (10076): Required extension pack not installed, remote desktop not enabled.
2026-01-10 23:41:25 (10076): Enabling shared directory for VM.
2026-01-10 23:41:26 (10076): Starting VM using VBoxManage interface. (boinc_f450861caa2fd552, slot#1)
2026-01-10 23:41:34 (10076): Successfully started VM. (PID = '11644')
2026-01-10 23:41:34 (10076): Reporting VM Process ID to BOINC.
2026-01-10 23:41:34 (10076): Guest Log: BIOS: VirtualBox 7.1.12
2026-01-10 23:41:34 (10076): Guest Log: CPUID EDX: 0x178bfbff
2026-01-10 23:41:34 (10076): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-10 23:41:34 (10076): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-10 23:41:34 (10076): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-10 23:41:34 (10076): Detected: Web Application Enabled (http://localhost:65400)
2026-01-10 23:41:34 (10076): Preference change detected
2026-01-10 23:41:34 (10076): Setting CPU throttle for VM. (100%)
2026-01-10 23:41:34 (10076): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-10 23:41:36 (10076): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-10 23:41:36 (10076): Guest Log: BIOS: Booting from Hard Disk...
2026-01-10 23:41:39 (10076): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-10 23:41:39 (10076): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-10 23:41:39 (10076): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-10 23:41:46 (10076): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-10 23:41:46 (10076): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-10 23:41:58 (10076): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-10 23:41:58 (10076): Guest Log: 00:00:00.000283 main     Log opened 2026-01-10T23:41:56.662237000Z
2026-01-10 23:41:58 (10076): Guest Log: 00:00:00.000515 main     OS Product: Linux
2026-01-10 23:41:58 (10076): Guest Log: 00:00:00.000568 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-10 23:41:58 (10076): Guest Log: 00:00:00.000610 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-10 23:41:58 (10076): Guest Log: 00:00:00.000652 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-10 23:41:58 (10076): Guest Log: 00:00:00.000653 main     Process ID: 1316
2026-01-10 23:41:58 (10076): Guest Log: 00:00:00.000654 main     Package type: LINUX_64BITS_GENERIC
2026-01-10 23:41:58 (10076): Guest Log: 00:00:00.001661 main     5.2.32 r132073 started. Verbose level = 0
2026-01-10 23:41:59 (10076): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-10 23:41:59 (10076): Guest Log: [INFO] Mounting shared directory
2026-01-10 23:41:59 (10076): Guest Log: [INFO] Checking for init_data.xml
2026-01-10 23:42:03 (10076): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-10 23:42:03 (10076): Guest Log: [INFO] Detected branch: prod
2026-01-10 23:42:03 (10076): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-10 23:42:03 (10076): Guest Log: Copying input files
2026-01-10 23:42:06 (10076): Guest Log: Copied input files into RunAtlas.
2026-01-10 23:42:06 (10076): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-10 23:42:06 (10076): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-10 23:42:06 (10076): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-10 23:42:06 (10076): Guest Log: Further information can be found at the LHC@home message board.
2026-01-10 23:42:09 (10076): Guest Log: 00:00:10.024592 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 604 640 586 000ns (GuestNow=1 768 110 121 306 249 000 ns GuestLast=1 768 088 516 665 663 000 ns fSetTimeLastLoop=true )
2026-01-10 23:42:15 (10076): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-10 23:42:15 (10076): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-10 23:42:15 (10076): Guest Log: 2.6.3.0 1596 0 32040 155006 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-10 23:42:17 (10076): Guest Log: copied the webapp to /var/www
2026-01-10 23:42:17 (10076): Guest Log: ATHENA_PROC_NUMBER=4
2026-01-10 23:42:17 (10076): Guest Log: ATHENA_CORE_NUMBER=4
2026-01-10 23:42:17 (10076): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-10 23:42:17 (10076): Guest Log:  *** Starting ATLAS job. (PandaID=6963168706 taskID=47898826) ***
2026-01-11 01:21:34 (10076): Status Report: Elapsed Time: '6000.000000'
2026-01-11 01:21:34 (10076): Status Report: CPU Time: '21461.312500'
2026-01-11 03:01:38 (10076): Status Report: Elapsed Time: '12000.000000'
2026-01-11 03:01:38 (10076): Status Report: CPU Time: '44854.093750'
2026-01-11 04:41:40 (10076): Status Report: Elapsed Time: '18000.029524'
2026-01-11 04:41:40 (10076): Status Report: CPU Time: '68057.265625'
2026-01-11 06:21:41 (10076): Status Report: Elapsed Time: '24000.029524'
2026-01-11 06:21:41 (10076): Status Report: CPU Time: '91321.734375'
2026-01-11 07:18:01 (10076): Guest Log:  *** Job finished ***
2026-01-11 07:18:01 (10076): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-11 07:18:01 (10076): Guest Log: 2026-01-11 13:17:28,096 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-11 07:18:01 (10076): Guest Log: 2026-01-11 13:17:28,096 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-11 07:18:01 (10076): Guest Log: 2026-01-11 13:17:37,900 | INFO     | [monitor] cgroup control has ended
2026-01-11 07:18:01 (10076): Guest Log: 2026-01-11 13:17:39,092 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139726889924416)>', '<ExcThread(monitor, started 139726015162112)>']
2026-01-11 07:18:01 (10076): Guest Log: 2026-01-11 13:17:39,859 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-11 07:18:01 (10076): Guest Log: 2026-01-11 13:17:39,859 | INFO     | [monitor] control thread has ended
2026-01-11 07:18:01 (10076): Guest Log: 2026-01-11 13:17:44,170 | INFO     | all workflow threads have been joined
2026-01-11 07:18:01 (10076): Guest Log: 2026-01-11 13:17:44,171 | INFO     | end of generic workflow (traces error code: 0)
2026-01-11 07:18:01 (10076): Guest Log: 2026-01-11 13:17:44,172 | INFO     | traces error code: 0
2026-01-11 07:18:01 (10076): Guest Log: 2026-01-11 13:17:44,172 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-11 07:18:01 (10076): Guest Log: 2026-01-11 13:17:44,459 [wrapper] ==== pilot stdout END ====
2026-01-11 07:18:01 (10076): Guest Log: 2026-01-11 13:17:44,485 [wrapper] ==== wrapper stdout RESUME ====
2026-01-11 07:18:01 (10076): Guest Log: 2026-01-11 13:17:44,512 [wrapper] pilotpid: 6010
2026-01-11 07:18:01 (10076): Guest Log: 2026-01-11 13:17:44,537 [wrapper] Pilot exit status: 0
2026-01-11 07:18:01 (10076): Guest Log: 2026-01-11 13:17:44,682 [wrapper] pandaids: 6963168706
2026-01-11 07:18:01 (10076): Guest Log: 2026-01-11 13:17:44,770 [wrapper] cleanup supervisor_pilot  2628 6011
2026-01-11 07:18:01 (10076): Guest Log: 2026-01-11 13:17:44,804 [wrapper] Test setup, not cleaning
2026-01-11 07:18:01 (10076): Guest Log: 2026-01-11 13:17:44,821 [wrapper] apfmon messages muted
2026-01-11 07:18:01 (10076): Guest Log: 2026-01-11 13:17:44,835 [wrapper] ==== wrapper stdout END ====
2026-01-11 07:18:01 (10076): Guest Log: 2026-01-11 13:17:44,851 [wrapper] ==== wrapper stderr END ====
2026-01-11 07:18:01 (10076): Guest Log:  *** Error codes and diagnostics ***
2026-01-11 07:18:01 (10076): Guest Log:     "exeErrorCode": 0,
2026-01-11 07:18:01 (10076): Guest Log:     "exeErrorDiag": "",
2026-01-11 07:18:01 (10076): Guest Log:     "pilotErrorCode": 0,
2026-01-11 07:18:01 (10076): Guest Log:     "pilotErrorDiag": "",
2026-01-11 07:18:01 (10076): Guest Log:  *** Listing of results directory ***
2026-01-11 07:18:01 (10076): Guest Log: total 226636
2026-01-11 07:18:01 (10076): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  9 00:57 pilot3.tar.gz
2026-01-11 07:18:01 (10076): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  9 00:59 runpilot2-wrapper.sh
2026-01-11 07:18:01 (10076): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  9 01:03 queuedata.json
2026-01-11 07:18:01 (10076): Guest Log: -rwxr-xr-x. 1 atlas atlas      8571 Jan 11 05:41 init_data.xml
2026-01-11 07:18:01 (10076): Guest Log: -rwxr-xr-x. 1 atlas atlas    592403 Jan 11 05:41 input.tar.gz
2026-01-11 07:18:01 (10076): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan 11 05:41 start_atlas.sh
2026-01-11 07:18:01 (10076): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 11 05:41 EVNT.47898824._001388.pool.root.1 -> /data/./ATLAS.root_0
2026-01-11 07:18:01 (10076): Guest Log: -rw-r--r--. 1 atlas atlas      2520 Jan 11 05:42 pandaJob.out
2026-01-11 07:18:01 (10076): Guest Log: -rw-------. 1 atlas atlas    989548 Jan 11 05:43 agis_schedconf.cvmfs.json
2026-01-11 07:18:01 (10076): Guest Log: drwx------. 5 atlas atlas      4096 Jan 11 05:43 pilot3
2026-01-11 07:18:01 (10076): Guest Log: -rw-------. 1 atlas atlas 220044879 Jan 11 13:15 HITS.47898826._036233.pool.root.1
2026-01-11 07:18:01 (10076): Guest Log: -rw-------. 1 atlas atlas      1037 Jan 11 13:16 memory_monitor_summary.json
2026-01-11 07:18:01 (10076): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan 11 13:16 agis_ddmendpoints.agis.ALL.json
2026-01-11 07:18:01 (10076): Guest Log: -rw-------. 1 atlas atlas    564288 Jan 11 13:16 log.47898826._036233.job.log.tgz.1
2026-01-11 07:18:01 (10076): Guest Log: -rw-------. 1 atlas atlas        95 Jan 11 13:16 pilot_heartbeat.json
2026-01-11 07:18:01 (10076): Guest Log: -rw-------. 1 atlas atlas      7812 Jan 11 13:16 heartbeat.json
2026-01-11 07:18:01 (10076): Guest Log: -rw-------. 1 atlas atlas      4805 Jan 11 13:17 pilotlog.txt
2026-01-11 07:18:01 (10076): Guest Log: -rw-------. 1 atlas atlas   3530195 Jan 11 13:17 log.47898826._036233.job.log.1
2026-01-11 07:18:01 (10076): Guest Log: -rw-------. 1 atlas atlas       357 Jan 11 13:17 output.list
2026-01-11 07:18:01 (10076): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 11 13:17 runtime_log
2026-01-11 07:18:01 (10076): Guest Log: -rw-------. 1 atlas atlas   4116480 Jan 11 13:17 result.tar.gz
2026-01-11 07:18:01 (10076): Guest Log: -rw-------. 1 atlas atlas       655 Jan 11 13:17 w2uKDmY1Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmq0lKDmWgybFn.diag
2026-01-11 07:18:01 (10076): Guest Log: -rw-r--r--. 1 atlas atlas      8725 Jan 11 13:17 runtime_log.err
2026-01-11 07:18:01 (10076): Guest Log: Looking for outputfile HITS.47898826._036233.pool.root.1
2026-01-11 07:18:01 (10076): Guest Log: HITS file was successfully produced
2026-01-11 07:18:01 (10076): Guest Log: -rw-------. 1 atlas atlas 220044879 Jan 11 13:15 /home/atlas/RunAtlas/HITS.47898826._036233.pool.root.1
2026-01-11 07:18:04 (10076): Guest Log: Successfully finished the ATLAS job!
2026-01-11 07:18:04 (10076): Guest Log: Copying the results back to the shared directory!
2026-01-11 07:18:04 (10076): Guest Log:  *** Contents of shared directory: ***
2026-01-11 07:18:05 (10076): Guest Log: total 437564
2026-01-11 07:18:05 (10076): Guest Log: -rwxrwxrwx. 1 root root 223279536 Jan 11 05:41 ATLAS.root_0
2026-01-11 07:18:05 (10076): Guest Log: -rwxrwxrwx. 1 root root 220044879 Jan 11  2026 HITS.pool.root.1
2026-01-11 07:18:05 (10076): Guest Log: -rwxrwxrwx. 1 root root      8571 Jan 11 05:41 init_data.xml
2026-01-11 07:18:05 (10076): Guest Log: -rwxrwxrwx. 1 root root    592403 Jan  9 07:33 input.tar.gz
2026-01-11 07:18:05 (10076): Guest Log: -rwxrwxrwx. 1 root root   4116480 Jan 11  2026 result.tar.gz
2026-01-11 07:18:05 (10076): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan  9 07:33 start_atlas.sh
2026-01-11 07:18:05 (10076): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-11 07:18:05 (10076): VM Completion File Detected.
2026-01-11 07:18:05 (10076): Powering off VM.
2026-01-11 07:18:06 (10076): Successfully stopped VM.
2026-01-11 07:18:06 (10076): Deregistering VM. (boinc_f450861caa2fd552, slot#1)
2026-01-11 07:18:07 (10076): Removing network bandwidth throttle group from VM.
2026-01-11 07:18:07 (10076): Removing VM from VirtualBox.
2026-01-11 07:18:12 (10076): called boinc_finish(0)

</stderr_txt>
]]>

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