Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:05:16 (6246): wrapper (7.7.26015): starting
11:05:16 (6246): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 11:05:16] Arguments: --nthreads 8
[2026-01-09 11:05:16] Threads: 8
[2026-01-09 11:05:16] Checking for CVMFS
[2026-01-09 11:05:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 11:05:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 11:05:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 11:05:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 11:05:16] 2.11.2.0 9669 35273 96224 154938 0 57 15768892 25165824 0 130560 0 14721064 99.849 7361836 3489 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 11:05:16] CVMFS is ok
[2026-01-09 11:05:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 11:05:16] Checking for apptainer binary...
[2026-01-09 11:05:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 11:05:16] Running /usr/bin/apptainer --version
[2026-01-09 11:05:16] apptainer version 1.3.2-1.el7
[2026-01-09 11:05:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 11:05:17] cg-vwn394.simple-grid.lan
[2026-01-09 11:05:17] apptainer works
[2026-01-09 11:05:17] Set ATHENA_PROC_NUMBER=8
[2026-01-09 11:05:17] Set ATHENA_CORE_NUMBER=8
[2026-01-09 11:05:17] Starting ATLAS job with PandaID=6963167932
[2026-01-09 11:05:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 13:48:54]  *** The last 200 lines of the pilot log: ***
[2026-01-09 13:48:54] 2026-01-09 12:48:10,207 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 13:48:54] 2026-01-09 12:48:11,356 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 13:48:54] 2026-01-09 12:48:11,357 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 13:48:54] 2026-01-09 12:48:11,359 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6963167932/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 13:48:54] 2026-01-09 12:48:11,360 | INFO     | extracted standard info from prmon json
[2026-01-09 13:48:54] 2026-01-09 12:48:11,360 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 13:48:54] 2026-01-09 12:48:11,360 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 13:48:54] 2026-01-09 12:48:11,360 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 13:48:54] 2026-01-09 12:48:11,361 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 13:48:54] 2026-01-09 12:48:11,364 | INFO     | fitting pss+swap vs Time
[2026-01-09 13:48:54] 2026-01-09 12:48:11,365 | INFO     | sum of square deviations: 1270051720.0
[2026-01-09 13:48:54] 2026-01-09 12:48:11,366 | INFO     | sum of deviations: 21795056823.500004
[2026-01-09 13:48:54] 2026-01-09 12:48:11,366 | INFO     | mean x: 1767958010.5
[2026-01-09 13:48:54] 2026-01-09 12:48:11,366 | INFO     | mean y: 2452794.69375
[2026-01-09 13:48:54] 2026-01-09 12:48:11,366 | INFO     | intersect: -30337055977.75964
[2026-01-09 13:48:54] 2026-01-09 12:48:11,366 | INFO     | chi2: 2.1790735339050715
[2026-01-09 13:48:54] 2026-01-09 12:48:11,367 | INFO     | sum of square deviations: 1154663510.0
[2026-01-09 13:48:54] 2026-01-09 12:48:11,368 | INFO     | sum of deviations: 31396005149.000004
[2026-01-09 13:48:54] 2026-01-09 12:48:11,368 | INFO     | mean x: 1767957858.0
[2026-01-09 13:48:54] 2026-01-09 12:48:11,368 | INFO     | mean y: 2465129.9096774193
[2026-01-09 13:48:54] 2026-01-09 12:48:11,368 | INFO     | intersect: -48069387433.42544
[2026-01-09 13:48:54] 2026-01-09 12:48:11,368 | INFO     | chi2: 1.4055564252916397
[2026-01-09 13:48:54] 2026-01-09 12:48:11,369 | INFO     | current chi2=1.4055564252916397 (change=35.497522069722365 %)
[2026-01-09 13:48:54] 2026-01-09 12:48:11,369 | INFO     | sum of square deviations: 1046484737.5
[2026-01-09 13:48:54] 2026-01-09 12:48:11,370 | INFO     | sum of deviations: 30233826378.000004
[2026-01-09 13:48:54] 2026-01-09 12:48:11,370 | INFO     | mean x: 1767957705.5
[2026-01-09 13:48:54] 2026-01-09 12:48:11,370 | INFO     | mean y: 2463489.2133333334
[2026-01-09 13:48:54] 2026-01-09 12:48:11,370 | INFO     | intersect: -51075325222.19084
[2026-01-09 13:48:54] 2026-01-09 12:48:11,371 | INFO     | chi2: 1.4055593298903306
[2026-01-09 13:48:54] 2026-01-09 12:48:11,371 | INFO     | current chi2=1.4055593298903306 (change=-0.00020665116238914076 %)
[2026-01-09 13:48:54] 2026-01-09 12:48:11,371 | INFO     | right removable region: 149
[2026-01-09 13:48:54] 2026-01-09 12:48:11,371 | INFO     | sum of square deviations: 1154663510.0
[2026-01-09 13:48:54] 2026-01-09 12:48:11,372 | INFO     | sum of deviations: -731195654.0000019
[2026-01-09 13:48:54] 2026-01-09 12:48:11,372 | INFO     | mean x: 1767958163.0
[2026-01-09 13:48:54] 2026-01-09 12:48:11,373 | INFO     | mean y: 2482097.664516129
[2026-01-09 13:48:54] 2026-01-09 12:48:11,373 | INFO     | intersect: 1122049239.1249986
[2026-01-09 13:48:54] 2026-01-09 12:48:11,373 | INFO     | chi2: 0.8216577286902497
[2026-01-09 13:48:54] 2026-01-09 12:48:11,373 | INFO     | current chi2=0.8216577286902497 (change=62.293253719723076 %)
[2026-01-09 13:48:54] 2026-01-09 12:48:11,373 | INFO     | sum of square deviations: 1046484737.5
[2026-01-09 13:48:54] 2026-01-09 12:48:11,374 | INFO     | sum of deviations: -3866443093.000001
[2026-01-09 13:48:54] 2026-01-09 12:48:11,375 | INFO     | mean x: 1767958315.5
[2026-01-09 13:48:54] 2026-01-09 12:48:11,375 | INFO     | mean y: 2486550.92
[2026-01-09 13:48:54] 2026-01-09 12:48:11,375 | INFO     | intersect: 6534555268.909202
[2026-01-09 13:48:54] 2026-01-09 12:48:11,375 | INFO     | chi2: 0.7988873868126424
[2026-01-09 13:48:54] 2026-01-09 12:48:11,375 | INFO     | current chi2=0.7988873868126424 (change=2.7712685078620254 %)
[2026-01-09 13:48:54] 2026-01-09 12:48:11,375 | INFO     | left removable region: 20
[2026-01-09 13:48:54] 2026-01-09 12:48:11,376 | INFO     | sum of square deviations: 665612480.0
[2026-01-09 13:48:54] 2026-01-09 12:48:11,376 | INFO     | sum of deviations: 3263822019.0
[2026-01-09 13:48:54] 2026-01-09 12:48:11,377 | INFO     | mean x: 1767958285.0
[2026-01-09 13:48:54] 2026-01-09 12:48:11,377 | INFO     | mean y: 2504494.069767442
[2026-01-09 13:48:54] 2026-01-09 12:48:11,377 | INFO     | intersect: -8666655644.358643
[2026-01-09 13:48:54] 2026-01-09 12:48:11,377 | INFO     | chi2: 0.0010307647515330855
[2026-01-09 13:48:54] 2026-01-09 12:48:11,377 | INFO     | current memory leak: 4.90 B/s (using 129 data points, chi2=0.00)
[2026-01-09 13:48:54] 2026-01-09 12:48:11,378 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-01-09 13:48:54] 2026-01-09 12:48:11,378 | INFO     | ..............................
[2026-01-09 13:48:54] 2026-01-09 12:48:11,378 | INFO     | . Timing measurements:
[2026-01-09 13:48:54] 2026-01-09 12:48:11,378 | INFO     | . get job = 0 s
[2026-01-09 13:48:54] 2026-01-09 12:48:11,378 | INFO     | . initial setup = 1 s
[2026-01-09 13:48:54] 2026-01-09 12:48:11,378 | INFO     | . payload setup = 6 s
[2026-01-09 13:48:54] 2026-01-09 12:48:11,379 | INFO     | . stage-in = 0 s
[2026-01-09 13:48:54] 2026-01-09 12:48:11,379 | INFO     | . payload execution = 9725 s
[2026-01-09 13:48:54] 2026-01-09 12:48:11,379 | INFO     | . stage-out = 0 s
[2026-01-09 13:48:54] 2026-01-09 12:48:11,379 | INFO     | . log creation = 0 s
[2026-01-09 13:48:54] 2026-01-09 12:48:11,379 | INFO     | ..............................
[2026-01-09 13:48:54] 2026-01-09 12:48:11,491 | INFO     | 
[2026-01-09 13:48:54] 2026-01-09 12:48:11,492 | INFO     | job summary report
[2026-01-09 13:48:54] 2026-01-09 12:48:11,492 | INFO     | --------------------------------------------------
[2026-01-09 13:48:54] 2026-01-09 12:48:11,492 | INFO     | PanDA job id: 6963167932
[2026-01-09 13:48:54] 2026-01-09 12:48:11,492 | INFO     | task id: 47898826
[2026-01-09 13:48:54] 2026-01-09 12:48:11,492 | INFO     | errors: (none)
[2026-01-09 13:48:54] 2026-01-09 12:48:11,492 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 13:48:54] 2026-01-09 12:48:11,492 | INFO     | pilot state: finished 
[2026-01-09 13:48:54] 2026-01-09 12:48:11,493 | INFO     | transexitcode: 0
[2026-01-09 13:48:54] 2026-01-09 12:48:11,493 | INFO     | exeerrorcode: 0
[2026-01-09 13:48:54] 2026-01-09 12:48:11,493 | INFO     | exeerrordiag: 
[2026-01-09 13:48:54] 2026-01-09 12:48:11,493 | INFO     | exitcode: 0
[2026-01-09 13:48:54] 2026-01-09 12:48:11,493 | INFO     | exitmsg: OK
[2026-01-09 13:48:54] 2026-01-09 12:48:11,493 | INFO     | cpuconsumptiontime: 73134 s
[2026-01-09 13:48:54] 2026-01-09 12:48:11,493 | INFO     | nevents: 400
[2026-01-09 13:48:54] 2026-01-09 12:48:11,493 | INFO     | neventsw: 0
[2026-01-09 13:48:54] 2026-01-09 12:48:11,493 | INFO     | pid: 16454
[2026-01-09 13:48:54] 2026-01-09 12:48:11,493 | INFO     | pgrp: 16454
[2026-01-09 13:48:54] 2026-01-09 12:48:11,494 | INFO     | corecount: 8
[2026-01-09 13:48:54] 2026-01-09 12:48:11,494 | INFO     | event service: False
[2026-01-09 13:48:54] 2026-01-09 12:48:11,494 | INFO     | sizes: {0: 2283972, 5: 2284234, 11: 2284290, 9735: 2312558, 9736: 2321614, 9743: 2321752}
[2026-01-09 13:48:54] 2026-01-09 12:48:11,494 | INFO     | --------------------------------------------------
[2026-01-09 13:48:54] 2026-01-09 12:48:11,494 | INFO     | 
[2026-01-09 13:48:54] 2026-01-09 12:48:11,494 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-01-09 13:48:54] 2026-01-09 12:48:11,516 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 13:48:54] 2026-01-09 12:48:11,516 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 13:48:54] 2026-01-09 12:48:11,517 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 13:48:54] 2026-01-09 12:48:11,517 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 13:48:54] 2026-01-09 12:48:11,517 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 13:48:54] 2026-01-09 12:48:11,517 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 13:48:54] 2026-01-09 12:48:11,517 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 13:48:54] 2026-01-09 12:48:11,517 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 13:48:54] 2026-01-09 12:48:11,517 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 13:48:54] 2026-01-09 12:48:11,517 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 13:48:54] 2026-01-09 12:48:11,518 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 13:48:54] 2026-01-09 12:48:11,518 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 13:48:54] 2026-01-09 12:48:11,518 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 13:48:54] 2026-01-09 12:48:11,518 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 13:48:54] 2026-01-09 12:48:11,518 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 13:48:54] 2026-01-09 12:48:11,518 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 13:48:54] 2026-01-09 12:48:11,518 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 13:48:54] 2026-01-09 12:48:11,518 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 13:48:54] 2026-01-09 12:48:11,518 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 13:48:54] 2026-01-09 12:48:11,519 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 13:48:54] 2026-01-09 12:48:11,519 | INFO     | job 6963167932 has completed (purged errors)
[2026-01-09 13:48:54] 2026-01-09 12:48:11,519 | INFO     | overall cleanup function is called
[2026-01-09 13:48:54] 2026-01-09 12:48:12,527 | INFO     | --- collectZombieJob: --- 10, [16454]
[2026-01-09 13:48:54] 2026-01-09 12:48:12,527 | INFO     | zombie collector waiting for pid 16454
[2026-01-09 13:48:54] 2026-01-09 12:48:12,527 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 13:48:54] 2026-01-09 12:48:12,527 | INFO     | collected zombie processes
[2026-01-09 13:48:54] 2026-01-09 12:48:12,528 | INFO     | will attempt to kill all subprocesses of pid=16454
[2026-01-09 13:48:54] 2026-01-09 12:48:12,581 | INFO     | process IDs to be killed: [16454] (in reverse order)
[2026-01-09 13:48:54] 2026-01-09 12:48:12,622 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 13:48:54] 2026-01-09 12:48:12,623 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 13:48:54] 2026-01-09 12:48:12,624 | INFO     | did not find any defunct processes belonging to 16454
[2026-01-09 13:48:54] 2026-01-09 12:48:12,626 | INFO     | did not find any defunct processes belonging to 16454
[2026-01-09 13:48:54] 2026-01-09 12:48:12,626 | INFO     | ready for new job
[2026-01-09 13:48:54] 2026-01-09 12:48:12,626 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 13:48:54] 2026-01-09 12:48:12,628 | INFO     | ***************************************
[2026-01-09 13:48:54] 2026-01-09 12:48:12,628 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 13:48:54] 2026-01-09 12:48:12,628 | INFO     | ***************************************
[2026-01-09 13:48:54] 2026-01-09 12:48:12,628 | INFO     | 
[2026-01-09 13:48:54] 2026-01-09 12:48:12,629 | INFO     | pilot is running in a VM
[2026-01-09 13:48:54] 2026-01-09 12:48:12,629 | INFO     | architecture information:
[2026-01-09 13:48:54] 2026-01-09 12:48:12,630 | INFO     | executing command: cat /etc/os-release
[2026-01-09 13:48:54] 2026-01-09 12:48:12,646 | INFO     | cat /etc/os-release:
[2026-01-09 13:48:54] NAME="CentOS Linux"
[2026-01-09 13:48:54] VERSION="7 (Core)"
[2026-01-09 13:48:54] ID="centos"
[2026-01-09 13:48:54] ID_LIKE="rhel fedora"
[2026-01-09 13:48:54] VERSION_ID="7"
[2026-01-09 13:48:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 13:48:54] ANSI_COLOR="0;31"
[2026-01-09 13:48:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 13:48:54] HOME_URL="https://www.centos.org/"
[2026-01-09 13:48:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 13:48:54] 
[2026-01-09 13:48:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 13:48:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 13:48:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 13:48:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 13:48:54] 
[2026-01-09 13:48:54] 2026-01-09 12:48:12,646 | INFO     | ***************************************
[2026-01-09 13:48:54] 2026-01-09 12:48:13,149 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-01-09 13:48:54] 2026-01-09 12:48:13,167 | INFO     | sufficient remaining disk space (498155388928 B)
[2026-01-09 13:48:54] 2026-01-09 12:48:13,167 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 13:48:54] 2026-01-09 12:48:13,168 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 13:48:54] 2026-01-09 12:48:13,168 | INFO     | update_server=False
[2026-01-09 13:48:54] 2026-01-09 12:48:13,168 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 13:48:54] 2026-01-09 12:48:13,168 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 13:48:54] 2026-01-09 12:48:13,169 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:48:54] 2026-01-09 12:48:13,421 | INFO     | all payload control threads have been joined
[2026-01-09 13:48:54] 2026-01-09 12:48:13,617 | INFO     | all data control threads have been joined
[2026-01-09 13:48:54] 2026-01-09 12:48:13,716 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:48:54] 2026-01-09 12:48:13,716 | INFO     | aborting loop
[2026-01-09 13:48:54] 2026-01-09 12:48:13,844 | INFO     | all job control threads have been joined
[2026-01-09 13:48:54] 2026-01-09 12:48:14,173 | INFO     | [job] retrieve thread has finished
[2026-01-09 13:48:54] 2026-01-09 12:48:14,174 | INFO     | [job] queue monitor thread has finished
[2026-01-09 13:48:54] 2026-01-09 12:48:14,197 | INFO     | [payload] validate_post thread has finished
[2026-01-09 13:48:54] 2026-01-09 12:48:14,256 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 13:48:54] 2026-01-09 12:48:14,427 | INFO     | [payload] control thread has finished
[2026-01-09 13:48:54] 2026-01-09 12:48:14,575 | INFO     | [data] copytool_in thread has finished
[2026-01-09 13:48:54] 2026-01-09 12:48:14,622 | INFO     | [data] control thread has finished
[2026-01-09 13:48:54] 2026-01-09 12:48:14,722 | INFO     | [job] job monitor thread has finished
[2026-01-09 13:48:54] 2026-01-09 12:48:14,850 | INFO     | [job] control thread has finished
[2026-01-09 13:48:54] 2026-01-09 12:48:14,991 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 13:48:54] 2026-01-09 12:48:15,174 | INFO     | [data] copytool_out thread has finished
[2026-01-09 13:48:54] 2026-01-09 12:48:15,292 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 13:48:54] 2026-01-09 12:48:15,433 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 13:48:54] 2026-01-09 12:48:15,448 | INFO     | [payload] failed_post thread has finished
[2026-01-09 13:48:54] 2026-01-09 12:48:15,593 | INFO     | [job] validate thread has finished
[2026-01-09 13:48:54] 2026-01-09 12:48:19,299 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 13:48:54] 2026-01-09 12:48:23,753 | INFO     | job.realtimelogging is not enabled
[2026-01-09 13:48:54] 2026-01-09 12:48:24,759 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 13:48:54] 2026-01-09 12:48:42,754 | INFO     | PID=10021 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 13:48:54] 2026-01-09 12:48:42,755 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 13:48:54] 2026-01-09 12:48:42,755 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 13:48:54] 2026-01-09 12:48:42,755 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 13:48:54] 2026-01-09 12:48:47,734 | INFO     | [monitor] cgroup control has ended
[2026-01-09 13:48:54] 2026-01-09 12:48:49,128 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139768409745216)>', '<ExcThread(monitor, started 139767823984384)>']
[2026-01-09 13:48:54] 2026-01-09 12:48:49,790 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 13:48:54] 2026-01-09 12:48:49,790 | INFO     | [monitor] control thread has ended
[2026-01-09 13:48:54] 2026-01-09 12:48:54,153 | INFO     | all workflow threads have been joined
[2026-01-09 13:48:54] 2026-01-09 12:48:54,153 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 13:48:54] 2026-01-09 12:48:54,154 | INFO     | traces error code: 0
[2026-01-09 13:48:54] 2026-01-09 12:48:54,154 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 13:48:54] 2026-01-09 12:48:54,283 [wrapper] ==== pilot stdout END ====
[2026-01-09 13:48:54] 2026-01-09 12:48:54,287 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 13:48:54] 2026-01-09 12:48:54,290 [wrapper] pilotpid: 10021
[2026-01-09 13:48:54] 2026-01-09 12:48:54,294 [wrapper] Pilot exit status: 0
[2026-01-09 13:48:54] 2026-01-09 12:48:54,308 [wrapper] pandaids: 6963167932
[2026-01-09 13:48:54] 2026-01-09 12:48:54,336 [wrapper] cleanup supervisor_pilot   795 10022
[2026-01-09 13:48:54] 2026-01-09 12:48:54,341 [wrapper] Test setup, not cleaning
[2026-01-09 13:48:54] 2026-01-09 12:48:54,344 [wrapper] apfmon messages muted
[2026-01-09 13:48:54] 2026-01-09 12:48:54,348 [wrapper] ==== wrapper stdout END ====
[2026-01-09 13:48:54] 2026-01-09 12:48:54,351 [wrapper] ==== wrapper stderr END ====
[2026-01-09 13:48:54]  *** Error codes and diagnostics ***
[2026-01-09 13:48:54]     "exeErrorCode": 0,
[2026-01-09 13:48:54]     "exeErrorDiag": "",
[2026-01-09 13:48:54]     "pilotErrorCode": 0,
[2026-01-09 13:48:54]     "pilotErrorDiag": "",
[2026-01-09 13:48:54]  *** Listing of results directory ***
[2026-01-09 13:48:54] total 438516
[2026-01-09 13:48:54] -rw-r--r--. 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-09 13:48:54] -rwx------. 1 boinc boinc     36322 Jan  9 01:59 runpilot2-wrapper.sh
[2026-01-09 13:48:54] -rw-r--r--. 1 boinc boinc      5112 Jan  9 02:02 queuedata.json
[2026-01-09 13:48:54] -rw-r--r--. 1 boinc boinc       100 Jan  9 11:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 13:48:54] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 11:05 run_atlas
[2026-01-09 13:48:54] -rw-r--r--. 1 boinc boinc       105 Jan  9 11:05 job.xml
[2026-01-09 13:48:54] -rw-r--r--. 2 boinc boinc 222352661 Jan  9 11:05 EVNT.47898824._001344.pool.root.1
[2026-01-09 13:48:54] -rw-r--r--. 1 boinc boinc      6390 Jan  9 11:05 init_data.xml
[2026-01-09 13:48:54] -rw-r--r--. 2 boinc boinc     15847 Jan  9 11:05 start_atlas.sh
[2026-01-09 13:48:54] drwxrwx--x. 2 boinc boinc        68 Jan  9 11:05 shared
[2026-01-09 13:48:54] -rw-r--r--. 2 boinc boinc    592397 Jan  9 11:05 input.tar.gz
[2026-01-09 13:48:54] -rw-r--r--. 1 boinc boinc         0 Jan  9 11:05 boinc_lockfile
[2026-01-09 13:48:54] -rw-r--r--. 1 boinc boinc      2520 Jan  9 11:05 pandaJob.out
[2026-01-09 13:48:54] -rw-------. 1 boinc boinc    989751 Jan  9 11:05 agis_schedconf.cvmfs.json
[2026-01-09 13:48:54] -rw-------. 1 boinc boinc   1516240 Jan  9 11:05 agis_ddmendpoints.agis.ALL.json
[2026-01-09 13:48:54] drwx------. 5 boinc boinc      4096 Jan  9 11:05 pilot3
[2026-01-09 13:48:54] -rw-------. 1 boinc boinc 219367504 Jan  9 13:47 HITS.47898826._036134.pool.root.1
[2026-01-09 13:48:54] -rw-r--r--. 1 boinc boinc       530 Jan  9 13:47 boinc_task_state.xml
[2026-01-09 13:48:54] -rw-------. 1 boinc boinc      1028 Jan  9 13:48 memory_monitor_summary.json
[2026-01-09 13:48:54] -rw-------. 1 boinc boinc    391392 Jan  9 13:48 log.47898826._036134.job.log.tgz.1
[2026-01-09 13:48:54] -rw-------. 1 boinc boinc      7773 Jan  9 13:48 heartbeat.json
[2026-01-09 13:48:54] -rw-r--r--. 1 boinc boinc        27 Jan  9 13:48 wrapper_checkpoint.txt
[2026-01-09 13:48:54] -rw-r--r--. 1 boinc boinc      8192 Jan  9 13:48 boinc_mmap_file
[2026-01-09 13:48:54] -rw-------. 1 boinc boinc        95 Jan  9 13:48 pilot_heartbeat.json
[2026-01-09 13:48:54] -rw-------. 1 boinc boinc      4882 Jan  9 13:48 pilotlog.txt
[2026-01-09 13:48:54] -rw-------. 1 boinc boinc   1314849 Jan  9 13:48 log.47898826._036134.job.log.1
[2026-01-09 13:48:54] -rw-------. 1 boinc boinc       357 Jan  9 13:48 output.list
[2026-01-09 13:48:54] -rw-r--r--. 1 boinc boinc       620 Jan  9 13:48 runtime_log
[2026-01-09 13:48:54] -rw-------. 1 boinc boinc   1730560 Jan  9 13:48 result.tar.gz
[2026-01-09 13:48:54] -rw-r--r--. 1 boinc boinc      8832 Jan  9 13:48 runtime_log.err
[2026-01-09 13:48:54] -rw-------. 1 boinc boinc       652 Jan  9 13:48 ebIKDmY1Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmO0lKDmeWBOem.diag
[2026-01-09 13:48:54] -rw-r--r--. 1 boinc boinc     20710 Jan  9 13:48 stderr.txt
[2026-01-09 13:48:54] HITS file was successfully produced:
[2026-01-09 13:48:54] -rw-------. 1 boinc boinc 219367504 Jan  9 13:47 shared/HITS.pool.root.1
[2026-01-09 13:48:54]  *** Contents of shared directory: ***
[2026-01-09 13:48:54] total 433660
[2026-01-09 13:48:54] -rw-r--r--. 2 boinc boinc 222352661 Jan  9 11:05 ATLAS.root_0
[2026-01-09 13:48:54] -rw-r--r--. 2 boinc boinc     15847 Jan  9 11:05 start_atlas.sh
[2026-01-09 13:48:54] -rw-r--r--. 2 boinc boinc    592397 Jan  9 11:05 input.tar.gz
[2026-01-09 13:48:54] -rw-------. 1 boinc boinc 219367504 Jan  9 13:47 HITS.pool.root.1
[2026-01-09 13:48:54] -rw-------. 1 boinc boinc   1730560 Jan  9 13:48 result.tar.gz
13:48:55 (6246): run_atlas exited; CPU time 73196.531984
13:48:55 (6246): called boinc_finish(0)

</stderr_txt>
]]>

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