Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:36:31 (2440595): wrapper (7.7.26015): starting
23:36:31 (2440595): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 23:36:31] Arguments: --nthreads 12
[2026-01-08 23:36:31] Threads: 12
[2026-01-08 23:36:31] Checking for CVMFS
[2026-01-08 23:36:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 23:36:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 23:36:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 23:36:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 23:36:32] 2.11.5.0 2639569 91415 148032 154936 0 383 42742161 45568000 17121 130560 0 714769370 99.780 452552018 23077 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-01-08 23:36:32] CVMFS is ok
[2026-01-08 23:36:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 23:36:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 23:36:32] Further information can be found at the LHC@home message board.
[2026-01-08 23:36:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 23:36:32] Checking for apptainer binary...
[2026-01-08 23:36:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 23:36:32] Running /usr/bin/apptainer --version
[2026-01-08 23:36:32] apptainer version 1.4.1-1.el9
[2026-01-08 23:36:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 23:36:32] wns0026.triumf.lcg
[2026-01-08 23:36:32] apptainer works
[2026-01-08 23:36:32] Set ATHENA_PROC_NUMBER=12
[2026-01-08 23:36:32] Set ATHENA_CORE_NUMBER=12
[2026-01-08 23:36:32] Starting ATLAS job with PandaID=6963167204
[2026-01-08 23:36:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 23:41:24]  *** The last 200 lines of the pilot log: ***
[2026-01-08 23:41:24] 2026-01-09 07:40:52,480 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 23:41:24] 2026-01-09 07:40:52,480 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 23:41:24] 2026-01-09 07:40:52,480 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | WARNING  | wrong length of table data, x=[1767944289.0], y=[1567.0] (must be same and length>=4)
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | could have reported an average CPU frequency of 2685 MHz (4 samples)
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | ..............................
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | . Timing measurements:
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | . get job = 0 s
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | . initial setup = 3 s
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | . payload setup = 12 s
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | . stage-in = 0 s
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | . payload execution = 48 s
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | . stage-out = 0 s
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | . log creation = 0 s
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | ..............................
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 23:41:24] 2026-01-09 07:40:52,482 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963167204/pilotlog.txt
[2026-01-08 23:41:24] 2026-01-09 07:40:52,495 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-08 23:41:24] - Log from pilotlog.txt -
[2026-01-08 23:41:24] 2026-01-09 07:40:52,479 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963167204/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 23:41:24] 2026-01-09 07:40:52,480 | INFO     | extracted standard info from prmon json
[2026-01-08 23:41:24] 2026-01-09 07:40:52,480 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 23:41:24] 2026-01-09 07:40:52,480 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 23:41:24] 2026-01-09 07:40:52,480 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 23:41:24] 2026-01-09 07:40:52,480 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | WARNING  | wrong length of table data, x=[1767944289.0], y=[1567.0] (must be same and length>=4)
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | could have reported an average CPU frequency of 2685 MHz (4 samples)
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | ..............................
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | . Timing measurements:
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | . get job = 0 s
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | . initial setup = 3 s
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | . payload setup = 12 s
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | . stage-in = 0 s
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | . payload execution = 48 s
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | . stage-out = 0 s
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | . log creation = 0 s
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | ..............................
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 23:41:24] 2026-01-09 07:40:52,482 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963167204/pilotlog.txt
[2026-01-08 23:41:24] 2026-01-09 07:40:52,495 | WARNING  | 
[2026-01-08 23:41:24] [begin log extracts]
[2026-01-08 23:41:24] - Log from pilotlog.txt -
[2026-01-08 23:41:24] 2026-01-09 07:40:52,479 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963167204/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 23:41:24] 2026-01-09 07:40:52,480 | INFO     | extracted standard info from prmon json
[2026-01-08 23:41:24] 2026-01-09 07:40:52,480 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 23:41:24] 2026-01-09 07:40:52,480 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 23:41:24] 2026-01-09 07:40:52,480 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 23:41:24] 2026-01-09 07:40:52,480 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | WARNING  | wrong length of table data, x=[1767944289.0], y=[1567.0] (must be same and length>=4)
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | could have reported an average CPU frequency of 2685 MHz (4 samples)
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | ..............................
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | . Timing measurements:
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | . get job = 0 s
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | . initial setup = 3 s
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | . payload setup = 12 s
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | . stage-in = 0 s
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | . payload execution = 48 s
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | . stage-out = 0 s
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | . log creation = 0 s
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | ..............................
[2026-01-08 23:41:24] 2026-01-09 07:40:52,481 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 23:41:24] 2026-01-09 07:40:52,482 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963167204/pilotlog.txt
[2026-01-08 23:41:24] [end log extracts]
[2026-01-08 23:41:24] 2026-01-09 07:40:52,495 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-08 23:41:24] 2026-01-09 07:40:52,496 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-08 23:41:24] 2026-01-09 07:40:52,554 | INFO     | 
[2026-01-08 23:41:24] 2026-01-09 07:40:52,554 | INFO     | job summary report
[2026-01-08 23:41:24] 2026-01-09 07:40:52,554 | INFO     | --------------------------------------------------
[2026-01-08 23:41:24] 2026-01-09 07:40:52,554 | INFO     | PanDA job id: 6963167204
[2026-01-08 23:41:24] 2026-01-09 07:40:52,554 | INFO     | task id: 47898826
[2026-01-08 23:41:24] 2026-01-09 07:40:52,554 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-08 23:38:31,907 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-08 23:41:24] 2026-01-09 07:40:52,554 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 23:41:24] 2026-01-09 07:40:52,554 | INFO     | pilot state: failed 
[2026-01-08 23:41:24] 2026-01-09 07:40:52,554 | INFO     | transexitcode: 65
[2026-01-08 23:41:24] 2026-01-09 07:40:52,554 | INFO     | exeerrorcode: 65
[2026-01-08 23:41:24] 2026-01-09 07:40:52,555 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 23:41:24] 2026-01-09 07:40:52,555 | INFO     | exitcode: 65
[2026-01-08 23:41:24] 2026-01-09 07:40:52,555 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 23:41:24] 2026-01-09 07:40:52,555 | INFO     | cpuconsumptiontime: 18 s
[2026-01-08 23:41:24] 2026-01-09 07:40:52,555 | INFO     | nevents: 0
[2026-01-08 23:41:24] 2026-01-09 07:40:52,555 | INFO     | neventsw: 0
[2026-01-08 23:41:24] 2026-01-09 07:40:52,555 | INFO     | pid: 2450982
[2026-01-08 23:41:24] 2026-01-09 07:40:52,555 | INFO     | pgrp: 2450982
[2026-01-08 23:41:24] 2026-01-09 07:40:52,555 | INFO     | corecount: 12
[2026-01-08 23:41:24] 2026-01-09 07:40:52,555 | INFO     | event service: False
[2026-01-08 23:41:24] 2026-01-09 07:40:52,555 | INFO     | sizes: {0: 2283968, 1: 2283968, 11: 2284198, 12: 2284286, 22: 2284314, 65: 2312015, 196: 2312153}
[2026-01-08 23:41:24] 2026-01-09 07:40:52,555 | INFO     | --------------------------------------------------
[2026-01-08 23:41:24] 2026-01-09 07:40:52,555 | INFO     | 
[2026-01-08 23:41:24] 2026-01-09 07:40:52,555 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-08 23:41:24] 2026-01-09 07:40:52,602 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 23:41:24] 2026-01-09 07:40:52,603 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 23:41:24] 2026-01-09 07:40:52,603 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 23:41:24] 2026-01-09 07:40:52,603 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 23:41:24] 2026-01-09 07:40:52,603 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 23:41:24] 2026-01-09 07:40:52,603 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 23:41:24] 2026-01-09 07:40:52,603 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 23:41:24] 2026-01-09 07:40:52,603 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 23:41:24] 2026-01-09 07:40:52,603 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 23:41:24] 2026-01-09 07:40:52,603 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 23:41:24] 2026-01-09 07:40:52,603 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 23:41:24] 2026-01-09 07:40:52,603 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 23:41:24] 2026-01-09 07:40:52,603 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 23:41:24] 2026-01-09 07:40:52,603 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 23:41:24] 2026-01-09 07:40:52,603 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 23:41:24] 2026-01-09 07:40:52,604 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 23:41:24] 2026-01-09 07:40:52,604 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 23:41:24] 2026-01-09 07:40:52,604 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 23:41:24] 2026-01-09 07:40:52,604 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 23:41:24] 2026-01-09 07:40:52,604 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 23:41:24] 2026-01-09 07:40:52,604 | INFO     | job 6963167204 has completed (purged errors)
[2026-01-08 23:41:24] 2026-01-09 07:40:52,604 | INFO     | overall cleanup function is called
[2026-01-08 23:41:24] 2026-01-09 07:40:53,611 | INFO     | --- collectZombieJob: --- 10, [2450982]
[2026-01-08 23:41:24] 2026-01-09 07:40:53,611 | INFO     | zombie collector waiting for pid 2450982
[2026-01-08 23:41:24] 2026-01-09 07:40:53,611 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 23:41:24] 2026-01-09 07:40:53,611 | INFO     | collected zombie processes
[2026-01-08 23:41:24] 2026-01-09 07:40:53,611 | INFO     | will attempt to kill all subprocesses of pid=2450982
[2026-01-08 23:41:24] 2026-01-09 07:40:54,558 | INFO     | process IDs to be killed: [2450982] (in reverse order)
[2026-01-08 23:41:24] 2026-01-09 07:40:54,650 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 23:41:24] 2026-01-09 07:40:54,651 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 23:41:24] 2026-01-09 07:40:54,658 | INFO     | did not find any defunct processes belonging to 2450982
[2026-01-08 23:41:24] 2026-01-09 07:40:54,665 | INFO     | did not find any defunct processes belonging to 2450982
[2026-01-08 23:41:24] 2026-01-09 07:40:54,665 | INFO     | ready for new job
[2026-01-08 23:41:24] 2026-01-09 07:40:54,666 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 23:41:24] 2026-01-09 07:40:54,667 | INFO     | ***************************************
[2026-01-08 23:41:24] 2026-01-09 07:40:54,667 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 23:41:24] 2026-01-09 07:40:54,667 | INFO     | ***************************************
[2026-01-08 23:41:24] 2026-01-09 07:40:54,667 | INFO     | 
[2026-01-08 23:41:24] 2026-01-09 07:40:54,669 | INFO     | architecture information:
[2026-01-08 23:41:24] 2026-01-09 07:40:54,669 | INFO     | executing command: cat /etc/os-release
[2026-01-08 23:41:24] 2026-01-09 07:40:54,707 | INFO     | cat /etc/os-release:
[2026-01-08 23:41:24] NAME="CentOS Linux"
[2026-01-08 23:41:24] VERSION="7 (Core)"
[2026-01-08 23:41:24] ID="centos"
[2026-01-08 23:41:24] ID_LIKE="rhel fedora"
[2026-01-08 23:41:24] VERSION_ID="7"
[2026-01-08 23:41:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 23:41:24] ANSI_COLOR="0;31"
[2026-01-08 23:41:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 23:41:24] HOME_URL="https://www.centos.org/"
[2026-01-08 23:41:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 23:41:24] 
[2026-01-08 23:41:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 23:41:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 23:41:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 23:41:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 23:41:24] 
[2026-01-08 23:41:24] 2026-01-09 07:40:54,707 | INFO     | ***************************************
[2026-01-08 23:41:24] 2026-01-09 07:40:55,211 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-08 23:41:24] 2026-01-09 07:40:55,245 | INFO     | sufficient remaining disk space (1469182902272 B)
[2026-01-08 23:41:24] 2026-01-09 07:40:55,246 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 23:41:24] 2026-01-09 07:40:55,246 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 23:41:24] 2026-01-09 07:40:55,246 | INFO     | update_server=False
[2026-01-08 23:41:24] 2026-01-09 07:40:55,246 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 23:41:24] 2026-01-09 07:40:55,247 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 23:41:24] 2026-01-09 07:40:55,385 | INFO     | all job control threads have been joined
[2026-01-08 23:41:24] 2026-01-09 07:40:55,393 | INFO     | all payload control threads have been joined
[2026-01-08 23:41:24] 2026-01-09 07:40:55,696 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:41:24] 2026-01-09 07:40:55,696 | INFO     | aborting loop
[2026-01-08 23:41:24] 2026-01-09 07:40:56,165 | INFO     | all data control threads have been joined
[2026-01-08 23:41:24] 2026-01-09 07:40:56,252 | INFO     | [job] retrieve thread has finished
[2026-01-08 23:41:24] 2026-01-09 07:40:56,261 | INFO     | [data] copytool_in thread has finished
[2026-01-08 23:41:24] 2026-01-09 07:40:56,391 | INFO     | [job] control thread has finished
[2026-01-08 23:41:24] 2026-01-09 07:40:56,400 | INFO     | [payload] control thread has finished
[2026-01-08 23:41:24] 2026-01-09 07:40:56,406 | INFO     | [job] validate thread has finished
[2026-01-08 23:41:24] 2026-01-09 07:40:56,489 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 23:41:24] 2026-01-09 07:40:56,680 | INFO     | [payload] failed_post thread has finished
[2026-01-08 23:41:24] 2026-01-09 07:40:56,702 | INFO     | [job] job monitor thread has finished
[2026-01-08 23:41:24] 2026-01-09 07:40:56,739 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 23:41:24] 2026-01-09 07:40:56,983 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 23:41:24] 2026-01-09 07:40:57,183 | INFO     | [data] control thread has finished
[2026-01-08 23:41:24] 2026-01-09 07:40:57,194 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 23:41:24] 2026-01-09 07:40:57,254 | INFO     | [data] copytool_out thread has finished
[2026-01-08 23:41:24] 2026-01-09 07:40:57,423 | INFO     | [payload] validate_post thread has finished
[2026-01-08 23:41:24] 2026-01-09 07:40:57,590 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:41:24] 2026-01-09 07:40:58,011 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 23:41:24] 2026-01-09 07:40:58,602 | INFO     | [job] queue monitor thread has finished
[2026-01-08 23:41:24] 2026-01-09 07:40:58,692 | INFO     | [monitor] cgroup control has ended
[2026-01-08 23:41:24] 2026-01-09 07:41:02,019 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 23:41:24] 2026-01-09 07:41:03,881 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140232244451136)>', '<ExcThread(monitor, started 140231848208128)>']
[2026-01-08 23:41:24] 2026-01-09 07:41:08,907 | INFO     | all workflow threads have been joined
[2026-01-08 23:41:24] 2026-01-09 07:41:08,907 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 23:41:24] 2026-01-09 07:41:08,907 | INFO     | traces error code: 0
[2026-01-08 23:41:24] 2026-01-09 07:41:08,907 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 23:41:24] 2026-01-09 07:41:24,297 | INFO     | PID=2444318 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 23:41:24] 2026-01-09 07:41:24,297 | INFO     | .. there are 28 such processes running
[2026-01-08 23:41:24] 2026-01-09 07:41:24,297 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 23:41:24] 2026-01-09 07:41:24,298 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 23:41:24] 2026-01-09 07:41:24,298 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 23:41:24] 2026-01-09 07:41:24,298 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 23:41:24] 2026-01-09 07:41:24,298 | INFO     | [monitor] control thread has ended
[2026-01-08 23:41:24] 2026-01-09 07:41:24,467 [wrapper] ==== pilot stdout END ====
[2026-01-08 23:41:24] 2026-01-09 07:41:24,470 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 23:41:24] 2026-01-09 07:41:24,472 [wrapper] pilotpid: 2444318
[2026-01-08 23:41:24] 2026-01-09 07:41:24,473 [wrapper] Pilot exit status: 0
[2026-01-08 23:41:24] 2026-01-09 07:41:24,482 [wrapper] pandaids: 6963167204
[2026-01-08 23:41:24] 2026-01-09 07:41:24,523 [wrapper] cleanup supervisor_pilot 2444324 2444319
[2026-01-08 23:41:24] 2026-01-09 07:41:24,526 [wrapper] Test setup, not cleaning
[2026-01-08 23:41:24] 2026-01-09 07:41:24,528 [wrapper] apfmon messages muted
[2026-01-08 23:41:24] 2026-01-09 07:41:24,529 [wrapper] ==== wrapper stdout END ====
[2026-01-08 23:41:24] 2026-01-09 07:41:24,531 [wrapper] ==== wrapper stderr END ====
[2026-01-08 23:41:24]  *** Error codes and diagnostics ***
[2026-01-08 23:41:25]     "exeErrorCode": 65,
[2026-01-08 23:41:25]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 23:41:25]     "pilotErrorCode": 1305,
[2026-01-08 23:41:25]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 23:41:25]  *** Listing of results directory ***
[2026-01-08 23:41:25] total 225440
[2026-01-08 23:41:25] -rw-r--r--. 1 boinc boinc    579449 Jan  8 16:57 pilot3.tar.gz
[2026-01-08 23:41:25] -rwx------. 1 boinc boinc     36322 Jan  8 16:59 runpilot2-wrapper.sh
[2026-01-08 23:41:25] -rw-r--r--. 1 boinc boinc      5112 Jan  8 17:02 queuedata.json
[2026-01-08 23:41:25] -rw-r--r--. 1 boinc boinc       100 Jan  8 23:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 23:41:25] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 23:36 run_atlas
[2026-01-08 23:41:25] -rw-r--r--. 1 boinc boinc       105 Jan  8 23:36 job.xml
[2026-01-08 23:41:25] -rw-r--r--. 1 boinc boinc      6594 Jan  8 23:36 init_data.xml
[2026-01-08 23:41:25] -rw-r--r--. 2 boinc boinc 226709512 Jan  8 23:36 EVNT.47898824._001379.pool.root.1
[2026-01-08 23:41:25] -rw-r--r--. 2 boinc boinc     15847 Jan  8 23:36 start_atlas.sh
[2026-01-08 23:41:25] drwxrwx--x. 2 boinc boinc      4096 Jan  8 23:36 shared
[2026-01-08 23:41:25] -rw-r--r--. 2 boinc boinc    592404 Jan  8 23:36 input.tar.gz
[2026-01-08 23:41:25] -rw-r--r--. 1 boinc boinc         0 Jan  8 23:36 boinc_lockfile
[2026-01-08 23:41:25] -rw-r--r--. 1 boinc boinc      2520 Jan  8 23:36 pandaJob.out
[2026-01-08 23:41:25] -rw-------. 1 boinc boinc    989771 Jan  8 23:36 agis_schedconf.cvmfs.json
[2026-01-08 23:41:25] -rw-------. 1 boinc boinc   1516240 Jan  8 23:36 agis_ddmendpoints.agis.ALL.json
[2026-01-08 23:41:25] drwx------. 5 boinc boinc      4096 Jan  8 23:36 pilot3
[2026-01-08 23:41:25] -rw-r--r--. 1 boinc boinc       523 Jan  8 23:38 boinc_task_state.xml
[2026-01-08 23:41:25] -rw-------. 1 boinc boinc       989 Jan  8 23:38 memory_monitor_summary.json
[2026-01-08 23:41:25] -rw-------. 1 boinc boinc     22047 Jan  8 23:38 log.47898826._035579.job.log.tgz.1
[2026-01-08 23:41:25] -rw-------. 1 boinc boinc      8425 Jan  8 23:40 heartbeat.json
[2026-01-08 23:41:25] -rw-r--r--. 1 boinc boinc      8192 Jan  8 23:41 boinc_mmap_file
[2026-01-08 23:41:25] -rw-r--r--. 1 boinc boinc        22 Jan  8 23:41 wrapper_checkpoint.txt
[2026-01-08 23:41:25] -rw-------. 1 boinc boinc       823 Jan  8 23:41 pilotlog.txt
[2026-01-08 23:41:25] -rw-------. 1 boinc boinc        95 Jan  8 23:41 pilot_heartbeat.json
[2026-01-08 23:41:25] -rw-------. 1 boinc boinc     90536 Jan  8 23:41 log.47898826._035579.job.log.1
[2026-01-08 23:41:25] -rw-------. 1 boinc boinc       188 Jan  8 23:41 output.list
[2026-01-08 23:41:25] -rw-r--r--. 1 boinc boinc       620 Jan  8 23:41 runtime_log
[2026-01-08 23:41:25] -rw-------. 1 boinc boinc    133120 Jan  8 23:41 result.tar.gz
[2026-01-08 23:41:25] -rw-r--r--. 1 boinc boinc      8636 Jan  8 23:41 runtime_log.err
[2026-01-08 23:41:25] -rw-------. 1 boinc boinc       645 Jan  8 23:41 EhaNDmM1Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOlgKDmia1K6m.diag
[2026-01-08 23:41:25] -rw-r--r--. 1 boinc boinc     21780 Jan  8 23:41 stderr.txt
[2026-01-08 23:41:25] No HITS result produced
[2026-01-08 23:41:25]  *** Contents of shared directory: ***
[2026-01-08 23:41:25] total 222132
[2026-01-08 23:41:25] -rw-r--r--. 2 boinc boinc 226709512 Jan  8 23:36 ATLAS.root_0
[2026-01-08 23:41:25] -rw-r--r--. 2 boinc boinc     15847 Jan  8 23:36 start_atlas.sh
[2026-01-08 23:41:25] -rw-r--r--. 2 boinc boinc    592404 Jan  8 23:36 input.tar.gz
[2026-01-08 23:41:25] -rw-------. 1 boinc boinc    133120 Jan  8 23:41 result.tar.gz
23:41:27 (2440595): run_atlas exited; CPU time 27.266551
23:41:27 (2440595): called boinc_finish(0)

</stderr_txt>
]]>

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