Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:47:13 (21223): wrapper (7.7.26015): starting
10:47:13 (21223): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 10:47:13] Arguments: --nthreads 8
[2026-01-09 10:47:13] Threads: 8
[2026-01-09 10:47:13] Checking for CVMFS
[2026-01-09 10:47:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:47:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:47:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:47:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:47:14] 2.11.2.0 820 35253 97596 154938 0 57 23191510 25165824 0 130560 0 16336788 99.832 9887252 3464 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 10:47:14] CVMFS is ok
[2026-01-09 10:47:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:47:14] Checking for apptainer binary...
[2026-01-09 10:47:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 10:47:14] Running /usr/bin/apptainer --version
[2026-01-09 10:47:14] apptainer version 1.3.2-1.el7
[2026-01-09 10:47:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:47:15] cg-vwn494.simple-grid.lan
[2026-01-09 10:47:15] apptainer works
[2026-01-09 10:47:15] Set ATHENA_PROC_NUMBER=8
[2026-01-09 10:47:15] Set ATHENA_CORE_NUMBER=8
[2026-01-09 10:47:15] Starting ATLAS job with PandaID=6963165828
[2026-01-09 10:47:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 13:17:51]  *** The last 200 lines of the pilot log: ***
[2026-01-09 13:17:51] 2026-01-09 12:17:07,807 | INFO     | sum of deviations: -5079409671.000003
[2026-01-09 13:17:51] 2026-01-09 12:17:07,807 | INFO     | mean x: 1767956534.0
[2026-01-09 13:17:51] 2026-01-09 12:17:07,808 | INFO     | mean y: 2490060.0476190476
[2026-01-09 13:17:51] 2026-01-09 12:17:07,808 | INFO     | intersect: 9119963253.263416
[2026-01-09 13:17:51] 2026-01-09 12:17:07,808 | INFO     | chi2: 2.378410755412358
[2026-01-09 13:17:51] 2026-01-09 12:17:07,808 | INFO     | sum of square deviations: 887813855.5
[2026-01-09 13:17:51] 2026-01-09 12:17:07,809 | INFO     | sum of deviations: 4547717506.0
[2026-01-09 13:17:51] 2026-01-09 12:17:07,809 | INFO     | mean x: 1767956381.5
[2026-01-09 13:17:51] 2026-01-09 12:17:07,810 | INFO     | mean y: 2504754.028169014
[2026-01-09 13:17:51] 2026-01-09 12:17:07,810 | INFO     | intersect: -9053634814.174328
[2026-01-09 13:17:51] 2026-01-09 12:17:07,810 | INFO     | chi2: 1.613653826915797
[2026-01-09 13:17:51] 2026-01-09 12:17:07,810 | INFO     | current chi2=1.613653826915797 (change=32.15411495917033 %)
[2026-01-09 13:17:51] 2026-01-09 12:17:07,811 | INFO     | sum of square deviations: 797291228.0
[2026-01-09 13:17:51] 2026-01-09 12:17:07,812 | INFO     | sum of deviations: 4243780735.9999995
[2026-01-09 13:17:51] 2026-01-09 12:17:07,812 | INFO     | mean x: 1767956229.0
[2026-01-09 13:17:51] 2026-01-09 12:17:07,812 | INFO     | mean y: 2504241.795620438
[2026-01-09 13:17:51] 2026-01-09 12:17:07,812 | INFO     | intersect: -9407882230.838947
[2026-01-09 13:17:51] 2026-01-09 12:17:07,812 | INFO     | chi2: 1.6142749573169053
[2026-01-09 13:17:51] 2026-01-09 12:17:07,812 | INFO     | current chi2=1.6142749573169053 (change=-0.03849217166333099 %)
[2026-01-09 13:17:51] 2026-01-09 12:17:07,813 | INFO     | right removable region: 136
[2026-01-09 13:17:51] 2026-01-09 12:17:07,813 | INFO     | sum of square deviations: 887813855.5
[2026-01-09 13:17:51] 2026-01-09 12:17:07,814 | INFO     | sum of deviations: -26579995003.0
[2026-01-09 13:17:51] 2026-01-09 12:17:07,814 | INFO     | mean x: 1767956686.5
[2026-01-09 13:17:51] 2026-01-09 12:17:07,815 | INFO     | mean y: 2523264.8309859154
[2026-01-09 13:17:51] 2026-01-09 12:17:07,815 | INFO     | intersect: 52932852749.52378
[2026-01-09 13:17:51] 2026-01-09 12:17:07,815 | INFO     | chi2: 0.9387225583365658
[2026-01-09 13:17:51] 2026-01-09 12:17:07,815 | INFO     | current chi2=0.9387225583365658 (change=60.5315206298832 %)
[2026-01-09 13:17:51] 2026-01-09 12:17:07,816 | INFO     | sum of square deviations: 797291228.0
[2026-01-09 13:17:51] 2026-01-09 12:17:07,816 | INFO     | sum of deviations: -25119491950.0
[2026-01-09 13:17:51] 2026-01-09 12:17:07,817 | INFO     | mean x: 1767956839.0
[2026-01-09 13:17:51] 2026-01-09 12:17:07,817 | INFO     | mean y: 2520709.7664233577
[2026-01-09 13:17:51] 2026-01-09 12:17:07,817 | INFO     | intersect: 55703845427.2233
[2026-01-09 13:17:51] 2026-01-09 12:17:07,817 | INFO     | chi2: 0.9236901252188139
[2026-01-09 13:17:51] 2026-01-09 12:17:07,818 | INFO     | current chi2=0.9236901252188139 (change=1.601371244810574 %)
[2026-01-09 13:17:51] 2026-01-09 12:17:07,818 | INFO     | left removable region: 20
[2026-01-09 13:17:51] 2026-01-09 12:17:07,819 | INFO     | sum of square deviations: 483971865.0
[2026-01-09 13:17:51] 2026-01-09 12:17:07,819 | INFO     | sum of deviations: -6517516970.5
[2026-01-09 13:17:51] 2026-01-09 12:17:07,820 | INFO     | mean x: 1767956808.5
[2026-01-09 13:17:51] 2026-01-09 12:17:07,820 | INFO     | mean y: 2519419.7844827585
[2026-01-09 13:17:51] 2026-01-09 12:17:07,820 | INFO     | intersect: 23811111066.96581
[2026-01-09 13:17:51] 2026-01-09 12:17:07,820 | INFO     | chi2: 0.08163173967873928
[2026-01-09 13:17:51] 2026-01-09 12:17:07,820 | INFO     | current memory leak: -13.47 B/s (using 116 data points, chi2=0.08)
[2026-01-09 13:17:51] 2026-01-09 12:17:07,821 | INFO     | could have reported an average CPU frequency of 2249 MHz (8 samples)
[2026-01-09 13:17:51] 2026-01-09 12:17:07,821 | INFO     | ..............................
[2026-01-09 13:17:51] 2026-01-09 12:17:07,821 | INFO     | . Timing measurements:
[2026-01-09 13:17:51] 2026-01-09 12:17:07,821 | INFO     | . get job = 0 s
[2026-01-09 13:17:51] 2026-01-09 12:17:07,821 | INFO     | . initial setup = 2 s
[2026-01-09 13:17:51] 2026-01-09 12:17:07,821 | INFO     | . payload setup = 7 s
[2026-01-09 13:17:51] 2026-01-09 12:17:07,822 | INFO     | . stage-in = 0 s
[2026-01-09 13:17:51] 2026-01-09 12:17:07,822 | INFO     | . payload execution = 8938 s
[2026-01-09 13:17:51] 2026-01-09 12:17:07,822 | INFO     | . stage-out = 1 s
[2026-01-09 13:17:51] 2026-01-09 12:17:07,822 | INFO     | . log creation = 0 s
[2026-01-09 13:17:51] 2026-01-09 12:17:07,822 | INFO     | ..............................
[2026-01-09 13:17:51] 2026-01-09 12:17:07,839 | INFO     | sufficient remaining disk space (498653462528 B)
[2026-01-09 13:17:51] 2026-01-09 12:17:07,845 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-09 13:17:51] 2026-01-09 12:17:07,856 | INFO     | time since job start (8978s) is within the limit (349056.0s)
[2026-01-09 13:17:51] 2026-01-09 12:17:07,889 | INFO     | size of work directory /var/lib/boinc/slots/5/PanDA_Pilot-6963165828: 3820500 B (within 4404019200 B limit)
[2026-01-09 13:17:51] 2026-01-09 12:17:07,889 | INFO     | pfn file=/var/lib/boinc/slots/5/PanDA_Pilot-6963165828/HITS.47898826._034941.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-09 13:17:51] 2026-01-09 12:17:07,890 | INFO     | total size of present files: 0 B (workdir size: 3820500 B)
[2026-01-09 13:17:51] 2026-01-09 12:17:07,890 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/5/PanDA_Pilot-6963165828/HITS.47898826._034941.pool.root.1 since it does not exist
[2026-01-09 13:17:51] 2026-01-09 12:17:07,948 | INFO     | 
[2026-01-09 13:17:51] 2026-01-09 12:17:07,948 | INFO     | job summary report
[2026-01-09 13:17:51] 2026-01-09 12:17:07,948 | INFO     | --------------------------------------------------
[2026-01-09 13:17:51] 2026-01-09 12:17:07,948 | INFO     | PanDA job id: 6963165828
[2026-01-09 13:17:51] 2026-01-09 12:17:07,949 | INFO     | task id: 47898826
[2026-01-09 13:17:51] 2026-01-09 12:17:07,949 | INFO     | errors: (none)
[2026-01-09 13:17:51] 2026-01-09 12:17:07,949 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 13:17:51] 2026-01-09 12:17:07,949 | INFO     | pilot state: finished 
[2026-01-09 13:17:51] 2026-01-09 12:17:07,949 | INFO     | transexitcode: 0
[2026-01-09 13:17:51] 2026-01-09 12:17:07,949 | INFO     | exeerrorcode: 0
[2026-01-09 13:17:51] 2026-01-09 12:17:07,950 | INFO     | exeerrordiag: 
[2026-01-09 13:17:51] 2026-01-09 12:17:07,950 | INFO     | exitcode: 0
[2026-01-09 13:17:51] 2026-01-09 12:17:07,950 | INFO     | exitmsg: OK
[2026-01-09 13:17:51] 2026-01-09 12:17:07,950 | INFO     | cpuconsumptiontime: 67857 s
[2026-01-09 13:17:51] 2026-01-09 12:17:07,950 | INFO     | nevents: 400
[2026-01-09 13:17:51] 2026-01-09 12:17:07,954 | INFO     | neventsw: 0
[2026-01-09 13:17:51] 2026-01-09 12:17:07,955 | INFO     | pid: 31407
[2026-01-09 13:17:51] 2026-01-09 12:17:07,955 | INFO     | pgrp: 31407
[2026-01-09 13:17:51] 2026-01-09 12:17:07,955 | INFO     | corecount: 8
[2026-01-09 13:17:51] 2026-01-09 12:17:07,955 | INFO     | event service: False
[2026-01-09 13:17:51] 2026-01-09 12:17:07,955 | INFO     | sizes: {0: 2283971, 5: 2284233, 11: 2284289, 8949: 2312084, 8951: 2321082, 8952: 2321138, 8962: 2321488}
[2026-01-09 13:17:51] 2026-01-09 12:17:07,955 | INFO     | --------------------------------------------------
[2026-01-09 13:17:51] 2026-01-09 12:17:07,955 | INFO     | 
[2026-01-09 13:17:51] 2026-01-09 12:17:07,956 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-01-09 13:17:51] 2026-01-09 12:17:07,989 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 13:17:51] 2026-01-09 12:17:07,990 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 13:17:51] 2026-01-09 12:17:07,990 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 13:17:51] 2026-01-09 12:17:07,990 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 13:17:51] 2026-01-09 12:17:07,991 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 13:17:51] 2026-01-09 12:17:07,991 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 13:17:51] 2026-01-09 12:17:07,991 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 13:17:51] 2026-01-09 12:17:07,991 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 13:17:51] 2026-01-09 12:17:07,991 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 13:17:51] 2026-01-09 12:17:07,991 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 13:17:51] 2026-01-09 12:17:07,991 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 13:17:51] 2026-01-09 12:17:07,991 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 13:17:51] 2026-01-09 12:17:07,991 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 13:17:51] 2026-01-09 12:17:07,992 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 13:17:51] 2026-01-09 12:17:07,992 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 13:17:51] 2026-01-09 12:17:07,992 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 13:17:51] 2026-01-09 12:17:07,992 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 13:17:51] 2026-01-09 12:17:07,992 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 13:17:51] 2026-01-09 12:17:07,992 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 13:17:51] 2026-01-09 12:17:07,992 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 13:17:51] 2026-01-09 12:17:07,992 | INFO     | job 6963165828 has completed (purged errors)
[2026-01-09 13:17:51] 2026-01-09 12:17:07,993 | INFO     | overall cleanup function is called
[2026-01-09 13:17:51] 2026-01-09 12:17:08,015 | INFO     | number of running child processes to parent process 31407: 1
[2026-01-09 13:17:51] 2026-01-09 12:17:08,016 | INFO     | maximum number of monitored processes: 6
[2026-01-09 13:17:51] 2026-01-09 12:17:08,016 | INFO     | aborting job monitoring since job object (job id=6963165828) has expired
[2026-01-09 13:17:51] 2026-01-09 12:17:09,002 | INFO     | --- collectZombieJob: --- 10, [31407]
[2026-01-09 13:17:51] 2026-01-09 12:17:09,002 | INFO     | zombie collector waiting for pid 31407
[2026-01-09 13:17:51] 2026-01-09 12:17:09,003 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 13:17:51] 2026-01-09 12:17:09,003 | INFO     | collected zombie processes
[2026-01-09 13:17:51] 2026-01-09 12:17:09,003 | INFO     | will attempt to kill all subprocesses of pid=31407
[2026-01-09 13:17:51] 2026-01-09 12:17:09,062 | INFO     | process IDs to be killed: [31407] (in reverse order)
[2026-01-09 13:17:51] 2026-01-09 12:17:09,115 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 13:17:51] 2026-01-09 12:17:09,115 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 13:17:51] 2026-01-09 12:17:09,117 | INFO     | did not find any defunct processes belonging to 31407
[2026-01-09 13:17:51] 2026-01-09 12:17:09,119 | INFO     | did not find any defunct processes belonging to 31407
[2026-01-09 13:17:51] 2026-01-09 12:17:09,119 | INFO     | ready for new job
[2026-01-09 13:17:51] 2026-01-09 12:17:09,119 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 13:17:51] 2026-01-09 12:17:09,121 | INFO     | ***************************************
[2026-01-09 13:17:51] 2026-01-09 12:17:09,121 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 13:17:51] 2026-01-09 12:17:09,121 | INFO     | ***************************************
[2026-01-09 13:17:51] 2026-01-09 12:17:09,121 | INFO     | 
[2026-01-09 13:17:51] 2026-01-09 12:17:09,122 | INFO     | pilot is running in a VM
[2026-01-09 13:17:51] 2026-01-09 12:17:09,122 | INFO     | architecture information:
[2026-01-09 13:17:51] 2026-01-09 12:17:09,122 | INFO     | executing command: cat /etc/os-release
[2026-01-09 13:17:51] 2026-01-09 12:17:09,144 | INFO     | cat /etc/os-release:
[2026-01-09 13:17:51] NAME="CentOS Linux"
[2026-01-09 13:17:51] VERSION="7 (Core)"
[2026-01-09 13:17:51] ID="centos"
[2026-01-09 13:17:51] ID_LIKE="rhel fedora"
[2026-01-09 13:17:51] VERSION_ID="7"
[2026-01-09 13:17:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 13:17:51] ANSI_COLOR="0;31"
[2026-01-09 13:17:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 13:17:51] HOME_URL="https://www.centos.org/"
[2026-01-09 13:17:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 13:17:51] 
[2026-01-09 13:17:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 13:17:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 13:17:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 13:17:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 13:17:51] 
[2026-01-09 13:17:51] 2026-01-09 12:17:09,144 | INFO     | ***************************************
[2026-01-09 13:17:51] 2026-01-09 12:17:09,647 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-01-09 13:17:51] 2026-01-09 12:17:09,665 | INFO     | sufficient remaining disk space (498658705408 B)
[2026-01-09 13:17:51] 2026-01-09 12:17:09,666 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 13:17:51] 2026-01-09 12:17:09,666 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 13:17:51] 2026-01-09 12:17:09,666 | INFO     | update_server=False
[2026-01-09 13:17:51] 2026-01-09 12:17:09,666 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 13:17:51] 2026-01-09 12:17:09,667 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 13:17:51] 2026-01-09 12:17:09,667 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 13:17:51] 2026-01-09 12:17:09,667 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 13:17:51] 2026-01-09 12:17:09,668 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 13:17:51] 2026-01-09 12:17:09,668 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:17:51] 2026-01-09 12:17:09,668 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:17:51] 2026-01-09 12:17:09,669 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 13:17:51] 2026-01-09 12:17:09,669 | INFO     | aborting loop
[2026-01-09 13:17:51] 2026-01-09 12:17:09,988 | INFO     | all data control threads have been joined
[2026-01-09 13:17:51] 2026-01-09 12:17:09,989 | INFO     | all payload control threads have been joined
[2026-01-09 13:17:51] 2026-01-09 12:17:10,018 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 13:17:51] 2026-01-09 12:17:10,328 | INFO     | all job control threads have been joined
[2026-01-09 13:17:51] 2026-01-09 12:17:10,670 | INFO     | [job] retrieve thread has finished
[2026-01-09 13:17:51] 2026-01-09 12:17:10,670 | INFO     | [job] job monitor thread has finished
[2026-01-09 13:17:51] 2026-01-09 12:17:10,673 | INFO     | [job] queue monitor thread has finished
[2026-01-09 13:17:51] 2026-01-09 12:17:10,995 | INFO     | [data] control thread has finished
[2026-01-09 13:17:51] 2026-01-09 12:17:10,996 | INFO     | [payload] control thread has finished
[2026-01-09 13:17:51] 2026-01-09 12:17:11,013 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 13:17:51] 2026-01-09 12:17:11,213 | INFO     | [payload] validate_post thread has finished
[2026-01-09 13:17:51] 2026-01-09 12:17:11,228 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 13:17:51] 2026-01-09 12:17:11,334 | INFO     | [job] control thread has finished
[2026-01-09 13:17:51] 2026-01-09 12:17:11,671 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 13:17:51] 2026-01-09 12:17:11,867 | INFO     | [data] copytool_in thread has finished
[2026-01-09 13:17:51] 2026-01-09 12:17:12,024 | INFO     | [data] copytool_out thread has finished
[2026-01-09 13:17:51] 2026-01-09 12:17:12,071 | INFO     | [job] validate thread has finished
[2026-01-09 13:17:51] 2026-01-09 12:17:12,249 | INFO     | [payload] failed_post thread has finished
[2026-01-09 13:17:51] 2026-01-09 12:17:13,677 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 13:17:51] 2026-01-09 12:17:20,328 | INFO     | job.realtimelogging is not enabled
[2026-01-09 13:17:51] 2026-01-09 12:17:21,334 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 13:17:51] 2026-01-09 12:17:36,375 [wrapper] supervise_pilot (15 min periods counter: 11)
[2026-01-09 13:17:51] 2026-01-09 12:17:44,444 | INFO     | [monitor] cgroup control has ended
[2026-01-09 13:17:51] 2026-01-09 12:17:45,599 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140628382263104)>', '<ExcThread(monitor, started 140627345921792)>']
[2026-01-09 13:17:51] 2026-01-09 12:17:45,753 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 13:17:51] 2026-01-09 12:17:45,754 | INFO     | [monitor] control thread has ended
[2026-01-09 13:17:51] 2026-01-09 12:17:50,624 | INFO     | all workflow threads have been joined
[2026-01-09 13:17:51] 2026-01-09 12:17:50,625 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 13:17:51] 2026-01-09 12:17:50,625 | INFO     | traces error code: 0
[2026-01-09 13:17:51] 2026-01-09 12:17:50,625 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 13:17:51] 2026-01-09 12:17:50,769 [wrapper] ==== pilot stdout END ====
[2026-01-09 13:17:51] 2026-01-09 12:17:50,774 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 13:17:51] 2026-01-09 12:17:50,779 [wrapper] pilotpid: 24971
[2026-01-09 13:17:51] 2026-01-09 12:17:50,782 [wrapper] Pilot exit status: 0
[2026-01-09 13:17:51] 2026-01-09 12:17:50,810 [wrapper] pandaids: 6963165828
[2026-01-09 13:17:51] 2026-01-09 12:17:50,866 [wrapper] cleanup supervisor_pilot 18222 24972
[2026-01-09 13:17:51] 2026-01-09 12:17:50,872 [wrapper] Test setup, not cleaning
[2026-01-09 13:17:51] 2026-01-09 12:17:50,878 [wrapper] apfmon messages muted
[2026-01-09 13:17:51] 2026-01-09 12:17:50,886 [wrapper] ==== wrapper stdout END ====
[2026-01-09 13:17:51] 2026-01-09 12:17:50,892 [wrapper] ==== wrapper stderr END ====
[2026-01-09 13:17:51]  *** Error codes and diagnostics ***
[2026-01-09 13:17:51]     "exeErrorCode": 0,
[2026-01-09 13:17:51]     "exeErrorDiag": "",
[2026-01-09 13:17:51]     "pilotErrorCode": 0,
[2026-01-09 13:17:51]     "pilotErrorDiag": "",
[2026-01-09 13:17:51]  *** Listing of results directory ***
[2026-01-09 13:17:51] total 440176
[2026-01-09 13:17:51] -rw-r--r--. 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-09 13:17:51] -rwx------. 1 boinc boinc     36322 Jan  9 01:59 runpilot2-wrapper.sh
[2026-01-09 13:17:51] -rw-r--r--. 1 boinc boinc      5112 Jan  9 02:02 queuedata.json
[2026-01-09 13:17:51] -rw-r--r--. 1 boinc boinc       100 Jan  9 10:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 13:17:51] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 10:47 run_atlas
[2026-01-09 13:17:51] -rw-r--r--. 1 boinc boinc       105 Jan  9 10:47 job.xml
[2026-01-09 13:17:51] -rw-r--r--. 2 boinc boinc 225387711 Jan  9 10:47 EVNT.47898824._001353.pool.root.1
[2026-01-09 13:17:51] -rw-r--r--. 2 boinc boinc     15847 Jan  9 10:47 start_atlas.sh
[2026-01-09 13:17:51] drwxrwx--x. 2 boinc boinc        68 Jan  9 10:47 shared
[2026-01-09 13:17:51] -rw-r--r--. 2 boinc boinc    592405 Jan  9 10:47 input.tar.gz
[2026-01-09 13:17:51] -rw-r--r--. 1 boinc boinc      6389 Jan  9 10:47 init_data.xml
[2026-01-09 13:17:51] -rw-r--r--. 1 boinc boinc         0 Jan  9 10:47 boinc_lockfile
[2026-01-09 13:17:51] -rw-r--r--. 1 boinc boinc      2520 Jan  9 10:47 pandaJob.out
[2026-01-09 13:17:51] -rw-------. 1 boinc boinc    989751 Jan  9 10:47 agis_schedconf.cvmfs.json
[2026-01-09 13:17:51] -rw-------. 1 boinc boinc   1516240 Jan  9 10:47 agis_ddmendpoints.agis.ALL.json
[2026-01-09 13:17:51] drwx------. 5 boinc boinc      4096 Jan  9 10:47 pilot3
[2026-01-09 13:17:51] -rw-r--r--. 1 boinc boinc       530 Jan  9 13:16 boinc_task_state.xml
[2026-01-09 13:17:51] -rw-------. 1 boinc boinc 218269264 Jan  9 13:16 HITS.47898826._034941.pool.root.1
[2026-01-09 13:17:51] -rw-------. 1 boinc boinc        95 Jan  9 13:16 pilot_heartbeat.json
[2026-01-09 13:17:51] -rw-------. 1 boinc boinc      1011 Jan  9 13:16 memory_monitor_summary.json
[2026-01-09 13:17:51] -rw-------. 1 boinc boinc    387369 Jan  9 13:16 log.47898826._034941.job.log.tgz.1
[2026-01-09 13:17:51] -rw-------. 1 boinc boinc      7764 Jan  9 13:17 heartbeat.json
[2026-01-09 13:17:51] -rw-r--r--. 1 boinc boinc        27 Jan  9 13:17 wrapper_checkpoint.txt
[2026-01-09 13:17:51] -rw-r--r--. 1 boinc boinc      8192 Jan  9 13:17 boinc_mmap_file
[2026-01-09 13:17:51] -rw-------. 1 boinc boinc      4687 Jan  9 13:17 pilotlog.txt
[2026-01-09 13:17:51] -rw-------. 1 boinc boinc   1205658 Jan  9 13:17 log.47898826._034941.job.log.1
[2026-01-09 13:17:51] -rw-------. 1 boinc boinc       357 Jan  9 13:17 output.list
[2026-01-09 13:17:51] -rw-r--r--. 1 boinc boinc       620 Jan  9 13:17 runtime_log
[2026-01-09 13:17:51] -rw-------. 1 boinc boinc   1607680 Jan  9 13:17 result.tar.gz
[2026-01-09 13:17:51] -rw-r--r--. 1 boinc boinc      8816 Jan  9 13:17 runtime_log.err
[2026-01-09 13:17:51] -rw-------. 1 boinc boinc       652 Jan  9 13:17 0tWMDmM1Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEzlKDmw2WdKm.diag
[2026-01-09 13:17:51] -rw-r--r--. 1 boinc boinc     20947 Jan  9 13:17 stderr.txt
[2026-01-09 13:17:51] HITS file was successfully produced:
[2026-01-09 13:17:51] -rw-------. 1 boinc boinc 218269264 Jan  9 13:16 shared/HITS.pool.root.1
[2026-01-09 13:17:51]  *** Contents of shared directory: ***
[2026-01-09 13:17:51] total 435432
[2026-01-09 13:17:51] -rw-r--r--. 2 boinc boinc 225387711 Jan  9 10:47 ATLAS.root_0
[2026-01-09 13:17:51] -rw-r--r--. 2 boinc boinc     15847 Jan  9 10:47 start_atlas.sh
[2026-01-09 13:17:51] -rw-r--r--. 2 boinc boinc    592405 Jan  9 10:47 input.tar.gz
[2026-01-09 13:17:51] -rw-------. 1 boinc boinc 218269264 Jan  9 13:16 HITS.pool.root.1
[2026-01-09 13:17:51] -rw-------. 1 boinc boinc   1607680 Jan  9 13:17 result.tar.gz
13:17:53 (21223): run_atlas exited; CPU time 67916.115672
13:17:53 (21223): called boinc_finish(0)

</stderr_txt>
]]>

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