Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:57:49 (2145): wrapper (7.7.26015): starting
10:57:49 (2145): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 10:57:49] Arguments: --nthreads 8
[2026-01-09 10:57:49] Threads: 8
[2026-01-09 10:57:49] Checking for CVMFS
[2026-01-09 10:57:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:57:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:57:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:57:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:57:49] 2.11.2.0 26786 35263 100048 154938 2 56 18705390 25165824 0 130560 0 14930852 99.834 9518873 3294 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 10:57:49] CVMFS is ok
[2026-01-09 10:57:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:57:49] Checking for apptainer binary...
[2026-01-09 10:57:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 10:57:49] Running /usr/bin/apptainer --version
[2026-01-09 10:57:49] apptainer version 1.3.2-1.el7
[2026-01-09 10:57:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:57:51] cg-vwn410.simple-grid.lan
[2026-01-09 10:57:51] apptainer works
[2026-01-09 10:57:51] Set ATHENA_PROC_NUMBER=8
[2026-01-09 10:57:51] Set ATHENA_CORE_NUMBER=8
[2026-01-09 10:57:51] Starting ATLAS job with PandaID=6963163416
[2026-01-09 10:57:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 13:51:28]  *** The last 200 lines of the pilot log: ***
[2026-01-09 13:51:28] 2026-01-09 12:50:43,566 | INFO     | monitor loop #711: job 0:6963163416 is in state 'finished'
[2026-01-09 13:51:28] 2026-01-09 12:50:43,566 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 13:51:28] 2026-01-09 12:50:44,221 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 13:51:28] 2026-01-09 12:50:44,222 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 13:51:28] 2026-01-09 12:50:44,224 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6963163416/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 13:51:28] 2026-01-09 12:50:44,224 | INFO     | extracted standard info from prmon json
[2026-01-09 13:51:28] 2026-01-09 12:50:44,225 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 13:51:28] 2026-01-09 12:50:44,225 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 13:51:28] 2026-01-09 12:50:44,225 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 13:51:28] 2026-01-09 12:50:44,225 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 13:51:28] 2026-01-09 12:50:44,229 | INFO     | fitting pss+swap vs Time
[2026-01-09 13:51:28] 2026-01-09 12:50:44,230 | INFO     | sum of square deviations: 1523386702.5
[2026-01-09 13:51:28] 2026-01-09 12:50:44,231 | INFO     | sum of deviations: 10426253132.500002
[2026-01-09 13:51:28] 2026-01-09 12:50:44,231 | INFO     | mean x: 1767957871.5
[2026-01-09 13:51:28] 2026-01-09 12:50:44,231 | INFO     | mean y: 2474816.9823529413
[2026-01-09 13:51:28] 2026-01-09 12:50:44,232 | INFO     | intersect: -12097654628.551462
[2026-01-09 13:51:28] 2026-01-09 12:50:44,232 | INFO     | chi2: 2.271375984490856
[2026-01-09 13:51:28] 2026-01-09 12:50:44,232 | INFO     | sum of square deviations: 1392881930.0
[2026-01-09 13:51:28] 2026-01-09 12:50:44,234 | INFO     | sum of deviations: 21109043228.999996
[2026-01-09 13:51:28] 2026-01-09 12:50:44,234 | INFO     | mean x: 1767957719.0
[2026-01-09 13:51:28] 2026-01-09 12:50:44,234 | INFO     | mean y: 2486988.5939393938
[2026-01-09 13:51:28] 2026-01-09 12:50:44,234 | INFO     | intersect: -26790807628.57094
[2026-01-09 13:51:28] 2026-01-09 12:50:44,234 | INFO     | chi2: 1.511590770483475
[2026-01-09 13:51:28] 2026-01-09 12:50:44,235 | INFO     | current chi2=1.511590770483475 (change=33.450437936971134 %)
[2026-01-09 13:51:28] 2026-01-09 12:50:44,235 | INFO     | sum of square deviations: 1270051720.0
[2026-01-09 13:51:28] 2026-01-09 12:50:44,236 | INFO     | sum of deviations: 20405042595.0
[2026-01-09 13:51:28] 2026-01-09 12:50:44,236 | INFO     | mean x: 1767957566.5
[2026-01-09 13:51:28] 2026-01-09 12:50:44,236 | INFO     | mean y: 2486114.375
[2026-01-09 13:51:28] 2026-01-09 12:50:44,237 | INFO     | intersect: -28402065355.84784
[2026-01-09 13:51:28] 2026-01-09 12:50:44,237 | INFO     | chi2: 1.5130941305807393
[2026-01-09 13:51:28] 2026-01-09 12:50:44,237 | INFO     | current chi2=1.5130941305807393 (change=-0.0994554959331631 %)
[2026-01-09 13:51:28] 2026-01-09 12:50:44,237 | INFO     | right removable region: 159
[2026-01-09 13:51:28] 2026-01-09 12:50:44,238 | INFO     | sum of square deviations: 1392881930.0
[2026-01-09 13:51:28] 2026-01-09 12:50:44,239 | INFO     | sum of deviations: -14391355277.0
[2026-01-09 13:51:28] 2026-01-09 12:50:44,239 | INFO     | mean x: 1767958024.0
[2026-01-09 13:51:28] 2026-01-09 12:50:44,239 | INFO     | mean y: 2503405.981818182
[2026-01-09 13:51:28] 2026-01-09 12:50:44,239 | INFO     | intersect: 18269171592.4281
[2026-01-09 13:51:28] 2026-01-09 12:50:44,240 | INFO     | chi2: 0.8644928764142468
[2026-01-09 13:51:28] 2026-01-09 12:50:44,240 | INFO     | current chi2=0.8644928764142468 (change=61.93968403658945 %)
[2026-01-09 13:51:28] 2026-01-09 12:50:44,240 | INFO     | sum of square deviations: 1270051720.0
[2026-01-09 13:51:28] 2026-01-09 12:50:44,241 | INFO     | sum of deviations: -15385791642.5
[2026-01-09 13:51:28] 2026-01-09 12:50:44,242 | INFO     | mean x: 1767958176.5
[2026-01-09 13:51:28] 2026-01-09 12:50:44,242 | INFO     | mean y: 2504606.26875
[2026-01-09 13:51:28] 2026-01-09 12:50:44,242 | INFO     | intersect: 21420086038.529823
[2026-01-09 13:51:28] 2026-01-09 12:50:44,242 | INFO     | chi2: 0.8545740348448287
[2026-01-09 13:51:28] 2026-01-09 12:50:44,242 | INFO     | current chi2=0.8545740348448287 (change=1.147359549168237 %)
[2026-01-09 13:51:28] 2026-01-09 12:50:44,243 | INFO     | left removable region: 20
[2026-01-09 13:51:28] 2026-01-09 12:50:44,243 | INFO     | sum of square deviations: 832722590.0
[2026-01-09 13:51:28] 2026-01-09 12:50:44,244 | INFO     | sum of deviations: 3516915411.0
[2026-01-09 13:51:28] 2026-01-09 12:50:44,244 | INFO     | mean x: 1767958146.0
[2026-01-09 13:51:28] 2026-01-09 12:50:44,244 | INFO     | mean y: 2506163.7553956835
[2026-01-09 13:51:28] 2026-01-09 12:50:44,244 | INFO     | intersect: -7464277281.701978
[2026-01-09 13:51:28] 2026-01-09 12:50:44,245 | INFO     | chi2: 0.0006609879229263346
[2026-01-09 13:51:28] 2026-01-09 12:50:44,245 | INFO     | current memory leak: 4.22 B/s (using 139 data points, chi2=0.00)
[2026-01-09 13:51:28] 2026-01-09 12:50:44,246 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-09 13:51:28] 2026-01-09 12:50:44,246 | INFO     | ..............................
[2026-01-09 13:51:28] 2026-01-09 12:50:44,246 | INFO     | . Timing measurements:
[2026-01-09 13:51:28] 2026-01-09 12:50:44,246 | INFO     | . get job = 0 s
[2026-01-09 13:51:28] 2026-01-09 12:50:44,246 | INFO     | . initial setup = 2 s
[2026-01-09 13:51:28] 2026-01-09 12:50:44,246 | INFO     | . payload setup = 7 s
[2026-01-09 13:51:28] 2026-01-09 12:50:44,247 | INFO     | . stage-in = 0 s
[2026-01-09 13:51:28] 2026-01-09 12:50:44,247 | INFO     | . payload execution = 10320 s
[2026-01-09 13:51:28] 2026-01-09 12:50:44,247 | INFO     | . stage-out = 1 s
[2026-01-09 13:51:28] 2026-01-09 12:50:44,247 | INFO     | . log creation = 0 s
[2026-01-09 13:51:28] 2026-01-09 12:50:44,247 | INFO     | ..............................
[2026-01-09 13:51:28] 2026-01-09 12:50:44,367 | INFO     | 
[2026-01-09 13:51:28] 2026-01-09 12:50:44,367 | INFO     | job summary report
[2026-01-09 13:51:28] 2026-01-09 12:50:44,367 | INFO     | --------------------------------------------------
[2026-01-09 13:51:28] 2026-01-09 12:50:44,367 | INFO     | PanDA job id: 6963163416
[2026-01-09 13:51:28] 2026-01-09 12:50:44,368 | INFO     | task id: 47898826
[2026-01-09 13:51:28] 2026-01-09 12:50:44,368 | INFO     | errors: (none)
[2026-01-09 13:51:28] 2026-01-09 12:50:44,368 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 13:51:28] 2026-01-09 12:50:44,368 | INFO     | pilot state: finished 
[2026-01-09 13:51:28] 2026-01-09 12:50:44,368 | INFO     | transexitcode: 0
[2026-01-09 13:51:28] 2026-01-09 12:50:44,368 | INFO     | exeerrorcode: 0
[2026-01-09 13:51:28] 2026-01-09 12:50:44,368 | INFO     | exeerrordiag: 
[2026-01-09 13:51:28] 2026-01-09 12:50:44,368 | INFO     | exitcode: 0
[2026-01-09 13:51:28] 2026-01-09 12:50:44,368 | INFO     | exitmsg: OK
[2026-01-09 13:51:28] 2026-01-09 12:50:44,369 | INFO     | cpuconsumptiontime: 75847 s
[2026-01-09 13:51:28] 2026-01-09 12:50:44,369 | INFO     | nevents: 400
[2026-01-09 13:51:28] 2026-01-09 12:50:44,369 | INFO     | neventsw: 0
[2026-01-09 13:51:28] 2026-01-09 12:50:44,369 | INFO     | pid: 12300
[2026-01-09 13:51:28] 2026-01-09 12:50:44,369 | INFO     | pgrp: 12300
[2026-01-09 13:51:28] 2026-01-09 12:50:44,369 | INFO     | corecount: 8
[2026-01-09 13:51:28] 2026-01-09 12:50:44,369 | INFO     | event service: False
[2026-01-09 13:51:28] 2026-01-09 12:50:44,369 | INFO     | sizes: {0: 2283744, 1: 2283999, 6: 2284261, 12: 2284289, 10331: 2312745, 10332: 2312744, 10333: 2321926, 10335: 2322010, 10342: 2322268}
[2026-01-09 13:51:28] 2026-01-09 12:50:44,369 | INFO     | --------------------------------------------------
[2026-01-09 13:51:28] 2026-01-09 12:50:44,369 | INFO     | 
[2026-01-09 13:51:28] 2026-01-09 12:50:44,370 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-09 13:51:28] 2026-01-09 12:50:44,395 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 13:51:28] 2026-01-09 12:50:44,396 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 13:51:28] 2026-01-09 12:50:44,396 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 13:51:28] 2026-01-09 12:50:44,396 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 13:51:28] 2026-01-09 12:50:44,396 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 13:51:28] 2026-01-09 12:50:44,396 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 13:51:28] 2026-01-09 12:50:44,396 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 13:51:28] 2026-01-09 12:50:44,396 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 13:51:28] 2026-01-09 12:50:44,396 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 13:51:28] 2026-01-09 12:50:44,396 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 13:51:28] 2026-01-09 12:50:44,397 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 13:51:28] 2026-01-09 12:50:44,397 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 13:51:28] 2026-01-09 12:50:44,397 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 13:51:28] 2026-01-09 12:50:44,397 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 13:51:28] 2026-01-09 12:50:44,397 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 13:51:28] 2026-01-09 12:50:44,397 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 13:51:28] 2026-01-09 12:50:44,397 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 13:51:28] 2026-01-09 12:50:44,398 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 13:51:28] 2026-01-09 12:50:44,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 13:51:28] 2026-01-09 12:50:44,398 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 13:51:28] 2026-01-09 12:50:44,398 | INFO     | job 6963163416 has completed (purged errors)
[2026-01-09 13:51:28] 2026-01-09 12:50:44,398 | INFO     | overall cleanup function is called
[2026-01-09 13:51:28] 2026-01-09 12:50:45,406 | INFO     | --- collectZombieJob: --- 10, [12300]
[2026-01-09 13:51:28] 2026-01-09 12:50:45,407 | INFO     | zombie collector waiting for pid 12300
[2026-01-09 13:51:28] 2026-01-09 12:50:45,407 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 13:51:28] 2026-01-09 12:50:45,407 | INFO     | collected zombie processes
[2026-01-09 13:51:28] 2026-01-09 12:50:45,407 | INFO     | will attempt to kill all subprocesses of pid=12300
[2026-01-09 13:51:28] 2026-01-09 12:50:45,472 | INFO     | process IDs to be killed: [12300] (in reverse order)
[2026-01-09 13:51:28] 2026-01-09 12:50:45,551 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 13:51:28] 2026-01-09 12:50:45,552 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 13:51:28] 2026-01-09 12:50:45,554 | INFO     | did not find any defunct processes belonging to 12300
[2026-01-09 13:51:28] 2026-01-09 12:50:45,555 | INFO     | did not find any defunct processes belonging to 12300
[2026-01-09 13:51:28] 2026-01-09 12:50:45,556 | INFO     | ready for new job
[2026-01-09 13:51:28] 2026-01-09 12:50:45,556 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 13:51:28] 2026-01-09 12:50:45,558 | INFO     | ***************************************
[2026-01-09 13:51:28] 2026-01-09 12:50:45,558 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 13:51:28] 2026-01-09 12:50:45,558 | INFO     | ***************************************
[2026-01-09 13:51:28] 2026-01-09 12:50:45,558 | INFO     | 
[2026-01-09 13:51:28] 2026-01-09 12:50:45,559 | INFO     | pilot is running in a VM
[2026-01-09 13:51:28] 2026-01-09 12:50:45,559 | INFO     | architecture information:
[2026-01-09 13:51:28] 2026-01-09 12:50:45,559 | INFO     | executing command: cat /etc/os-release
[2026-01-09 13:51:28] 2026-01-09 12:50:45,580 | INFO     | cat /etc/os-release:
[2026-01-09 13:51:28] NAME="CentOS Linux"
[2026-01-09 13:51:28] VERSION="7 (Core)"
[2026-01-09 13:51:28] ID="centos"
[2026-01-09 13:51:28] ID_LIKE="rhel fedora"
[2026-01-09 13:51:28] VERSION_ID="7"
[2026-01-09 13:51:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 13:51:28] ANSI_COLOR="0;31"
[2026-01-09 13:51:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 13:51:28] HOME_URL="https://www.centos.org/"
[2026-01-09 13:51:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 13:51:28] 
[2026-01-09 13:51:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 13:51:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 13:51:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 13:51:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 13:51:28] 
[2026-01-09 13:51:28] 2026-01-09 12:50:45,581 | INFO     | ***************************************
[2026-01-09 13:51:28] 2026-01-09 12:50:46,084 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-09 13:51:28] 2026-01-09 12:50:46,108 | INFO     | sufficient remaining disk space (498128125952 B)
[2026-01-09 13:51:28] 2026-01-09 12:50:46,108 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 13:51:28] 2026-01-09 12:50:46,108 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 13:51:28] 2026-01-09 12:50:46,108 | INFO     | update_server=False
[2026-01-09 13:51:28] 2026-01-09 12:50:46,108 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 13:51:28] 2026-01-09 12:50:46,109 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:51:28] 2026-01-09 12:50:46,272 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 13:51:28] 2026-01-09 12:50:47,002 | INFO     | all data control threads have been joined
[2026-01-09 13:51:28] 2026-01-09 12:50:47,077 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:51:28] 2026-01-09 12:50:47,077 | INFO     | aborting loop
[2026-01-09 13:51:28] 2026-01-09 12:50:47,114 | INFO     | [job] retrieve thread has finished
[2026-01-09 13:51:28] 2026-01-09 12:50:47,115 | INFO     | [job] queue monitor thread has finished
[2026-01-09 13:51:28] 2026-01-09 12:50:47,261 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 13:51:28] 2026-01-09 12:50:47,295 | INFO     | all job control threads have been joined
[2026-01-09 13:51:28] 2026-01-09 12:50:47,452 | INFO     | all payload control threads have been joined
[2026-01-09 13:51:28] 2026-01-09 12:50:47,642 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 13:51:28] 2026-01-09 12:50:47,872 | INFO     | [job] validate thread has finished
[2026-01-09 13:51:28] 2026-01-09 12:50:47,952 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 13:51:28] 2026-01-09 12:50:48,008 | INFO     | [data] control thread has finished
[2026-01-09 13:51:28] 2026-01-09 12:50:48,083 | INFO     | [job] job monitor thread has finished
[2026-01-09 13:51:28] 2026-01-09 12:50:48,156 | INFO     | [data] copytool_in thread has finished
[2026-01-09 13:51:28] 2026-01-09 12:50:48,278 | INFO     | [data] copytool_out thread has finished
[2026-01-09 13:51:28] 2026-01-09 12:50:48,301 | INFO     | [job] control thread has finished
[2026-01-09 13:51:28] 2026-01-09 12:50:48,446 | INFO     | [payload] validate_post thread has finished
[2026-01-09 13:51:28] 2026-01-09 12:50:48,458 | INFO     | [payload] control thread has finished
[2026-01-09 13:51:28] 2026-01-09 12:50:48,458 | INFO     | [payload] failed_post thread has finished
[2026-01-09 13:51:28] 2026-01-09 12:50:48,467 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 13:51:28] 2026-01-09 12:50:48,534 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 13:51:28] 2026-01-09 12:50:51,959 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 13:51:28] 2026-01-09 12:51:16,471 | INFO     | PID=5861 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 13:51:28] 2026-01-09 12:51:16,472 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 13:51:28] 2026-01-09 12:51:16,472 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 13:51:28] 2026-01-09 12:51:16,473 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 13:51:28] 2026-01-09 12:51:22,376 | INFO     | [monitor] cgroup control has ended
[2026-01-09 13:51:28] 2026-01-09 12:51:23,483 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139980951144256)>', '<ExcThread(monitor, started 139980651337472)>']
[2026-01-09 13:51:28] 2026-01-09 12:51:23,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 13:51:28] 2026-01-09 12:51:23,506 | INFO     | [monitor] control thread has ended
[2026-01-09 13:51:28] 2026-01-09 12:51:28,495 | INFO     | all workflow threads have been joined
[2026-01-09 13:51:28] 2026-01-09 12:51:28,495 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 13:51:28] 2026-01-09 12:51:28,496 | INFO     | traces error code: 0
[2026-01-09 13:51:28] 2026-01-09 12:51:28,496 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 13:51:28] 2026-01-09 12:51:28,641 [wrapper] ==== pilot stdout END ====
[2026-01-09 13:51:28] 2026-01-09 12:51:28,645 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 13:51:28] 2026-01-09 12:51:28,649 [wrapper] pilotpid: 5861
[2026-01-09 13:51:28] 2026-01-09 12:51:28,652 [wrapper] Pilot exit status: 0
[2026-01-09 13:51:28] 2026-01-09 12:51:28,670 [wrapper] pandaids: 6963163416
[2026-01-09 13:51:28] 2026-01-09 12:51:28,709 [wrapper] cleanup supervisor_pilot 31504 5862
[2026-01-09 13:51:28] 2026-01-09 12:51:28,714 [wrapper] Test setup, not cleaning
[2026-01-09 13:51:28] 2026-01-09 12:51:28,718 [wrapper] apfmon messages muted
[2026-01-09 13:51:28] 2026-01-09 12:51:28,722 [wrapper] ==== wrapper stdout END ====
[2026-01-09 13:51:28] 2026-01-09 12:51:28,726 [wrapper] ==== wrapper stderr END ====
[2026-01-09 13:51:28]  *** Error codes and diagnostics ***
[2026-01-09 13:51:28]     "exeErrorCode": 0,
[2026-01-09 13:51:28]     "exeErrorDiag": "",
[2026-01-09 13:51:28]     "pilotErrorCode": 0,
[2026-01-09 13:51:28]     "pilotErrorDiag": "",
[2026-01-09 13:51:28]  *** Listing of results directory ***
[2026-01-09 13:51:28] total 444152
[2026-01-09 13:51:28] -rw-r--r--. 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-09 13:51:28] -rwx------. 1 boinc boinc     36322 Jan  9 01:58 runpilot2-wrapper.sh
[2026-01-09 13:51:28] -rw-r--r--. 1 boinc boinc      5112 Jan  9 02:02 queuedata.json
[2026-01-09 13:51:28] -rw-r--r--. 1 boinc boinc       100 Jan  9 10:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 13:51:28] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 10:57 run_atlas
[2026-01-09 13:51:28] -rw-r--r--. 1 boinc boinc       105 Jan  9 10:57 job.xml
[2026-01-09 13:51:28] -rw-r--r--. 2 boinc boinc 223026048 Jan  9 10:57 EVNT.47898824._001321.pool.root.1
[2026-01-09 13:51:28] -rw-r--r--. 2 boinc boinc     15847 Jan  9 10:57 start_atlas.sh
[2026-01-09 13:51:28] drwxrwx--x. 2 boinc boinc        68 Jan  9 10:57 shared
[2026-01-09 13:51:28] -rw-r--r--. 2 boinc boinc    592402 Jan  9 10:57 input.tar.gz
[2026-01-09 13:51:28] -rw-r--r--. 1 boinc boinc      6390 Jan  9 10:57 init_data.xml
[2026-01-09 13:51:28] -rw-r--r--. 1 boinc boinc         0 Jan  9 10:57 boinc_lockfile
[2026-01-09 13:51:28] -rw-r--r--. 1 boinc boinc      2520 Jan  9 10:57 pandaJob.out
[2026-01-09 13:51:28] -rw-------. 1 boinc boinc    989751 Jan  9 10:58 agis_schedconf.cvmfs.json
[2026-01-09 13:51:28] -rw-------. 1 boinc boinc   1516240 Jan  9 10:58 agis_ddmendpoints.agis.ALL.json
[2026-01-09 13:51:28] drwx------. 5 boinc boinc      4096 Jan  9 10:58 pilot3
[2026-01-09 13:51:28] -rw-------. 1 boinc boinc 224288420 Jan  9 13:49 HITS.47898826._034643.pool.root.1
[2026-01-09 13:51:28] -rw-r--r--. 1 boinc boinc       530 Jan  9 13:50 boinc_task_state.xml
[2026-01-09 13:51:28] -rw-------. 1 boinc boinc      1014 Jan  9 13:50 memory_monitor_summary.json
[2026-01-09 13:51:28] -rw-------. 1 boinc boinc    409180 Jan  9 13:50 log.47898826._034643.job.log.tgz.1
[2026-01-09 13:51:28] -rw-------. 1 boinc boinc      7771 Jan  9 13:50 heartbeat.json
[2026-01-09 13:51:28] -rw-r--r--. 1 boinc boinc      8192 Jan  9 13:51 boinc_mmap_file
[2026-01-09 13:51:28] -rw-------. 1 boinc boinc        95 Jan  9 13:51 pilot_heartbeat.json
[2026-01-09 13:51:28] -rw-r--r--. 1 boinc boinc        28 Jan  9 13:51 wrapper_checkpoint.txt
[2026-01-09 13:51:28] -rw-------. 1 boinc boinc      4808 Jan  9 13:51 pilotlog.txt
[2026-01-09 13:51:28] -rw-------. 1 boinc boinc   1391849 Jan  9 13:51 log.47898826._034643.job.log.1
[2026-01-09 13:51:28] -rw-------. 1 boinc boinc       357 Jan  9 13:51 output.list
[2026-01-09 13:51:28] -rw-r--r--. 1 boinc boinc       620 Jan  9 13:51 runtime_log
[2026-01-09 13:51:28] -rw-------. 1 boinc boinc   1822720 Jan  9 13:51 result.tar.gz
[2026-01-09 13:51:28] -rw-r--r--. 1 boinc boinc      8817 Jan  9 13:51 runtime_log.err
[2026-01-09 13:51:28] -rw-------. 1 boinc boinc       655 Jan  9 13:51 GnUKDmB1Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmbjgKDmxkl4im.diag
[2026-01-09 13:51:28] -rw-r--r--. 1 boinc boinc     20758 Jan  9 13:51 stderr.txt
[2026-01-09 13:51:28] HITS file was successfully produced:
[2026-01-09 13:51:28] -rw-------. 1 boinc boinc 224288420 Jan  9 13:49 shared/HITS.pool.root.1
[2026-01-09 13:51:28]  *** Contents of shared directory: ***
[2026-01-09 13:51:28] total 439208
[2026-01-09 13:51:28] -rw-r--r--. 2 boinc boinc 223026048 Jan  9 10:57 ATLAS.root_0
[2026-01-09 13:51:28] -rw-r--r--. 2 boinc boinc     15847 Jan  9 10:57 start_atlas.sh
[2026-01-09 13:51:28] -rw-r--r--. 2 boinc boinc    592402 Jan  9 10:57 input.tar.gz
[2026-01-09 13:51:28] -rw-------. 1 boinc boinc 224288420 Jan  9 13:49 HITS.pool.root.1
[2026-01-09 13:51:28] -rw-------. 1 boinc boinc   1822720 Jan  9 13:51 result.tar.gz
13:51:30 (2145): run_atlas exited; CPU time 75919.213564
13:51:30 (2145): called boinc_finish(0)

</stderr_txt>
]]>

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