Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:26:25 (3632792): wrapper (7.7.26015): starting
16:26:25 (3632792): wrapper: running run_atlas (--nthreads 3)
[2026-01-09 16:26:25] Arguments: --nthreads 3
[2026-01-09 16:26:25] Threads: 3
[2026-01-09 16:26:25] Checking for CVMFS
[2026-01-09 16:26:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 16:26:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 16:26:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 16:26:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 16:26:25] 2.9.2.0 2993219 2553 79060 154948 0 57 21997135 36864001 0 130560 0 1645607 99.989 94619 4723 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 16:26:25] CVMFS is ok
[2026-01-09 16:26:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 16:26:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 16:26:25] Further information can be found at the LHC@home message board.
[2026-01-09 16:26:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 16:26:25] Checking for apptainer binary...
[2026-01-09 16:26:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 16:26:25] Running /usr/bin/apptainer --version
[2026-01-09 16:26:25] apptainer version 1.4.1-1.1
[2026-01-09 16:26:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 16:26:25] magicA161
[2026-01-09 16:26:25] apptainer works
[2026-01-09 16:26:25] Set ATHENA_PROC_NUMBER=3
[2026-01-09 16:26:25] Set ATHENA_CORE_NUMBER=3
[2026-01-09 16:26:25] Starting ATLAS job with PandaID=6963163220
[2026-01-09 16:26:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 18:20:45]  *** The last 200 lines of the pilot log: ***
[2026-01-09 18:20:45] 2026-01-09 17:20:03,628 | INFO     | architecture information:
[2026-01-09 18:20:45] 2026-01-09 17:20:03,629 | INFO     | executing command: cat /etc/os-release
[2026-01-09 18:20:45] 2026-01-09 17:20:03,637 | INFO     | cat /etc/os-release:
[2026-01-09 18:20:45] NAME="CentOS Linux"
[2026-01-09 18:20:45] VERSION="7 (Core)"
[2026-01-09 18:20:45] ID="centos"
[2026-01-09 18:20:45] ID_LIKE="rhel fedora"
[2026-01-09 18:20:45] VERSION_ID="7"
[2026-01-09 18:20:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 18:20:45] ANSI_COLOR="0;31"
[2026-01-09 18:20:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 18:20:45] HOME_URL="https://www.centos.org/"
[2026-01-09 18:20:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 18:20:45] 
[2026-01-09 18:20:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 18:20:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 18:20:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 18:20:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 18:20:45] 
[2026-01-09 18:20:45] 2026-01-09 17:20:03,637 | INFO     | ***************************************
[2026-01-09 18:20:45] 2026-01-09 17:20:04,140 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-09 18:20:45] 2026-01-09 17:20:04,151 | INFO     | sufficient remaining disk space (382980849664 B)
[2026-01-09 18:20:45] 2026-01-09 17:20:04,151 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 18:20:45] 2026-01-09 17:20:04,152 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 18:20:45] 2026-01-09 17:20:04,152 | INFO     | update_server=False
[2026-01-09 18:20:45] 2026-01-09 17:20:04,152 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 18:20:45] 2026-01-09 17:20:04,152 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 18:20:45] 2026-01-09 17:20:04,152 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:20:45] 2026-01-09 17:20:04,152 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 18:20:45] 2026-01-09 17:20:04,152 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 18:20:45] 2026-01-09 17:20:04,152 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 18:20:45] 2026-01-09 17:20:04,152 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 18:20:45] 2026-01-09 17:20:04,335 | INFO     | all data control threads have been joined
[2026-01-09 18:20:45] 2026-01-09 17:20:04,883 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:20:45] 2026-01-09 17:20:04,883 | INFO     | aborting loop
[2026-01-09 18:20:45] 2026-01-09 17:20:05,036 | INFO     | all payload control threads have been joined
[2026-01-09 18:20:45] 2026-01-09 17:20:05,157 | INFO     | [job] retrieve thread has finished
[2026-01-09 18:20:45] 2026-01-09 17:20:05,158 | INFO     | [job] queue monitor thread has finished
[2026-01-09 18:20:45] 2026-01-09 17:20:05,340 | INFO     | [data] control thread has finished
[2026-01-09 18:20:45] 2026-01-09 17:20:05,385 | INFO     | all job control threads have been joined
[2026-01-09 18:20:45] 2026-01-09 17:20:05,419 | INFO     | [payload] validate_post thread has finished
[2026-01-09 18:20:45] 2026-01-09 17:20:05,614 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 18:20:45] 2026-01-09 17:20:05,690 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 18:20:45] 2026-01-09 17:20:05,888 | INFO     | [job] job monitor thread has finished
[2026-01-09 18:20:45] 2026-01-09 17:20:06,042 | INFO     | [payload] control thread has finished
[2026-01-09 18:20:45] 2026-01-09 17:20:06,050 | INFO     | [data] copytool_in thread has finished
[2026-01-09 18:20:45] 2026-01-09 17:20:06,391 | INFO     | [job] control thread has finished
[2026-01-09 18:20:45] 2026-01-09 17:20:06,475 | INFO     | [payload] failed_post thread has finished
[2026-01-09 18:20:45] 2026-01-09 17:20:06,576 | INFO     | [job] validate thread has finished
[2026-01-09 18:20:45] 2026-01-09 17:20:06,600 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 18:20:45] 2026-01-09 17:20:06,611 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 18:20:45] 2026-01-09 17:20:07,620 | INFO     | [data] copytool_out thread has finished
[2026-01-09 18:20:45] 2026-01-09 17:20:08,159 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 18:20:45] 2026-01-09 17:20:14,303 | INFO     | job.realtimelogging is not enabled
[2026-01-09 18:20:45] 2026-01-09 17:20:15,308 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 18:20:45] 2026-01-09 17:20:39,087 | INFO     | [monitor] cgroup control has ended
[2026-01-09 18:20:45] 2026-01-09 17:20:40,599 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140595038234432)>', '<ExcThread(monitor, started 140594370291456)>']
[2026-01-09 18:20:45] 2026-01-09 17:20:41,347 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 18:20:45] 2026-01-09 17:20:41,348 | INFO     | [monitor] control thread has ended
[2026-01-09 18:20:45] 2026-01-09 17:20:45,607 | INFO     | all workflow threads have been joined
[2026-01-09 18:20:45] 2026-01-09 17:20:45,607 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 18:20:45] 2026-01-09 17:20:45,607 | INFO     | traces error code: 0
[2026-01-09 18:20:45] 2026-01-09 17:20:45,608 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 18:20:45] 2026-01-09 17:20:45,657 [wrapper] ==== pilot stdout END ====
[2026-01-09 18:20:45] 2026-01-09 17:20:45,659 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 18:20:45] 2026-01-09 17:20:45,661 [wrapper] pilotpid: 3636518
[2026-01-09 18:20:45] 2026-01-09 17:20:45,663 [wrapper] Pilot exit status: 0
[2026-01-09 18:20:45] 2026-01-09 17:20:45,670 [wrapper] pandaids: 6963163220
[2026-01-09 18:20:45] 2026-01-09 17:20:45,686 [wrapper] cleanup supervisor_pilot 3657445 3636519
[2026-01-09 18:20:45] 2026-01-09 17:20:45,688 [wrapper] Test setup, not cleaning
[2026-01-09 18:20:45] 2026-01-09 17:20:45,691 [wrapper] apfmon messages muted
[2026-01-09 18:20:45] 2026-01-09 17:20:45,693 [wrapper] ==== wrapper stdout END ====
[2026-01-09 18:20:45] 2026-01-09 17:20:45,695 [wrapper] ==== wrapper stderr END ====
[2026-01-09 18:20:45]  *** Error codes and diagnostics ***
[2026-01-09 18:20:45]     "exeErrorCode": 0,
[2026-01-09 18:20:45]     "exeErrorDiag": "",
[2026-01-09 18:20:45]     "pilotErrorCode": 0,
[2026-01-09 18:20:45]     "pilotErrorDiag": "",
[2026-01-09 18:20:45]  *** Listing of results directory ***
[2026-01-09 18:20:45] total 439176
[2026-01-09 18:20:45] -rw-r--r-- 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-09 18:20:45] -rwx------ 1 boinc boinc     36322 Jan  9 01:58 runpilot2-wrapper.sh
[2026-01-09 18:20:45] -rw-r--r-- 1 boinc boinc      5112 Jan  9 02:02 queuedata.json
[2026-01-09 18:20:45] -rw-r--r-- 1 boinc boinc       100 Jan  9 16:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 18:20:45] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 16:26 run_atlas
[2026-01-09 18:20:45] -rw-r--r-- 1 boinc boinc       105 Jan  9 16:26 job.xml
[2026-01-09 18:20:45] -rw-r--r-- 2 boinc boinc 223159227 Jan  9 16:26 EVNT.47898824._001313.pool.root.1
[2026-01-09 18:20:45] -rw-r--r-- 2 boinc boinc    592402 Jan  9 16:26 input.tar.gz
[2026-01-09 18:20:45] -rw-r--r-- 2 boinc boinc     15847 Jan  9 16:26 start_atlas.sh
[2026-01-09 18:20:45] drwxrwx--x 2 boinc boinc      4096 Jan  9 16:26 shared
[2026-01-09 18:20:45] -rw-r--r-- 1 boinc boinc         0 Jan  9 16:26 boinc_setup_complete
[2026-01-09 18:20:45] -rw-r--r-- 1 boinc boinc      6448 Jan  9 16:26 init_data.xml
[2026-01-09 18:20:45] -rw-r--r-- 1 boinc boinc         0 Jan  9 16:26 boinc_lockfile
[2026-01-09 18:20:45] -rw-r--r-- 1 boinc boinc      2520 Jan  9 16:26 pandaJob.out
[2026-01-09 18:20:45] -rw------- 1 boinc boinc    989377 Jan  9 16:26 agis_schedconf.cvmfs.json
[2026-01-09 18:20:45] -rw------- 1 boinc boinc   1516240 Jan  9 16:26 agis_ddmendpoints.agis.ALL.json
[2026-01-09 18:20:45] drwx------ 5 boinc boinc      4096 Jan  9 16:26 pilot3
[2026-01-09 18:20:45] -rw-r--r-- 1 boinc boinc       529 Jan  9 18:19 boinc_task_state.xml
[2026-01-09 18:20:45] -rw------- 1 boinc boinc 220093481 Jan  9 18:19 HITS.47898826._034447.pool.root.1
[2026-01-09 18:20:45] -rw------- 1 boinc boinc      1028 Jan  9 18:19 memory_monitor_summary.json
[2026-01-09 18:20:45] -rw------- 1 boinc boinc    292871 Jan  9 18:19 log.47898826._034447.job.log.tgz.1
[2026-01-09 18:20:45] -rw------- 1 boinc boinc      7756 Jan  9 18:20 heartbeat.json
[2026-01-09 18:20:45] -rw------- 1 boinc boinc        95 Jan  9 18:20 pilot_heartbeat.json
[2026-01-09 18:20:45] -rw-r--r-- 1 boinc boinc        27 Jan  9 18:20 wrapper_checkpoint.txt
[2026-01-09 18:20:45] -rw-r--r-- 1 boinc boinc      8192 Jan  9 18:20 boinc_mmap_file
[2026-01-09 18:20:45] -rw------- 1 boinc boinc      4628 Jan  9 18:20 pilotlog.txt
[2026-01-09 18:20:45] -rw------- 1 boinc boinc    983840 Jan  9 18:20 log.47898826._034447.job.log.1
[2026-01-09 18:20:45] -rw------- 1 boinc boinc       357 Jan  9 18:20 output.list
[2026-01-09 18:20:45] -rw-r--r-- 1 boinc boinc       620 Jan  9 18:20 runtime_log
[2026-01-09 18:20:45] -rw------- 1 boinc boinc   1300480 Jan  9 18:20 result.tar.gz
[2026-01-09 18:20:45] -rw-r--r-- 1 boinc boinc      8912 Jan  9 18:20 runtime_log.err
[2026-01-09 18:20:45] -rw------- 1 boinc boinc       662 Jan  9 18:20 JleMDmA1Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJylKDmqMALxn.diag
[2026-01-09 18:20:45] -rw-r--r-- 1 boinc boinc      8988 Jan  9 18:20 stderr.txt
[2026-01-09 18:20:45] HITS file was successfully produced:
[2026-01-09 18:20:45] -rw------- 1 boinc boinc 220093481 Jan  9 18:19 shared/HITS.pool.root.1
[2026-01-09 18:20:45]  *** Contents of shared directory: ***
[2026-01-09 18:20:45] total 434744
[2026-01-09 18:20:45] -rw-r--r-- 2 boinc boinc 223159227 Jan  9 16:26 ATLAS.root_0
[2026-01-09 18:20:45] -rw-r--r-- 2 boinc boinc    592402 Jan  9 16:26 input.tar.gz
[2026-01-09 18:20:45] -rw-r--r-- 2 boinc boinc     15847 Jan  9 16:26 start_atlas.sh
[2026-01-09 18:20:45] -rw------- 1 boinc boinc 220093481 Jan  9 18:19 HITS.pool.root.1
[2026-01-09 18:20:45] -rw------- 1 boinc boinc   1300480 Jan  9 18:20 result.tar.gz
18:20:47 (3632792): run_atlas exited; CPU time 19677.091142
18:20:47 (3632792): called boinc_finish(0)

</stderr_txt>
]]>

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