Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:14:03 (2426167): wrapper (7.7.26015): starting
22:14:03 (2426167): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 22:14:03] Arguments: --nthreads 4
[2026-01-09 22:14:03] Threads: 4
[2026-01-09 22:14:03] Checking for CVMFS
[2026-01-09 22:14:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 22:14:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 22:14:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 22:14:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 22:14:04] 2.9.2.0 1623267 2894 88656 154956 0 57 19494915 36864001 0 130560 0 2069386 99.989 112660 5793 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 22:14:04] CVMFS is ok
[2026-01-09 22:14:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 22:14:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 22:14:04] Further information can be found at the LHC@home message board.
[2026-01-09 22:14:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 22:14:04] Checking for apptainer binary...
[2026-01-09 22:14:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 22:14:04] Running /usr/bin/apptainer --version
[2026-01-09 22:14:04] apptainer version 1.4.1-1.1
[2026-01-09 22:14:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 22:14:04] thA350a
[2026-01-09 22:14:04] apptainer works
[2026-01-09 22:14:04] Set ATHENA_PROC_NUMBER=4
[2026-01-09 22:14:04] Set ATHENA_CORE_NUMBER=4
[2026-01-09 22:14:04] Starting ATLAS job with PandaID=6963162480
[2026-01-09 22:14:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 23:52:25]  *** The last 200 lines of the pilot log: ***
[2026-01-09 23:52:25]  status=None
[2026-01-09 23:52:25]  status_code=0
[2026-01-09 23:52:25]  storage_token=
[2026-01-09 23:52:25]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6963162480/log.47898826._034101.job.log.tgz.1
[2026-01-09 23:52:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/16/log.47898826._034101.job.log.tgz.1
[2026-01-09 23:52:25]  workdir=None
[2026-01-09 23:52:25] ]
[2026-01-09 23:52:25] 2026-01-09 22:51:32,489 | INFO     | transferring file log.47898826._034101.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6963162480/log.47898826._034101.job.log.tgz.1 to /local/data/boinc/
[2026-01-09 23:52:25] 2026-01-09 22:51:32,489 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6963162480/log.47898826._034101.job.log.tgz.1 /local/data/boinc/slots/0/log.47898826._0341
[2026-01-09 23:52:25] 2026-01-09 22:51:32,506 | INFO     | adding to output.list: log.47898826._034101.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6b/16/log.47898826._034101.job.log.tg
[2026-01-09 23:52:25] 2026-01-09 22:51:32,507 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 23:52:25] 2026-01-09 22:51:32,507 | INFO     | summary of transferred files:
[2026-01-09 23:52:25] 2026-01-09 22:51:32,507 | INFO     |  -- lfn=log.47898826._034101.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 23:52:25] 2026-01-09 22:51:32,507 | INFO     | stage-out finished correctly
[2026-01-09 23:52:25] 2026-01-09 22:51:33,548 | INFO     | time since job start (5842s) is within the limit (349056.0s)
[2026-01-09 23:52:25] 2026-01-09 22:51:34,123 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 23:52:25] 2026-01-09 22:51:34,164 | INFO     | job 6963162480 has state=finished
[2026-01-09 23:52:25] 2026-01-09 22:51:34,164 | INFO     | preparing for final server update for job 6963162480 in state='finished'
[2026-01-09 23:52:25] 2026-01-09 22:51:34,164 | INFO     | this job has now completed (state=finished)
[2026-01-09 23:52:25] 2026-01-09 22:51:34,164 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 23:52:25] 2026-01-09 22:51:34,164 | INFO     | log transfer has been attempted: DONE
[2026-01-09 23:52:25] 2026-01-09 22:51:34,164 | INFO     | job 6963162480 has finished - writing final server update
[2026-01-09 23:52:25] 2026-01-09 22:51:34,165 | INFO     | total number of processed events: 400 (read)
[2026-01-09 23:52:25] 2026-01-09 22:51:34,165 | INFO     | executing command: lscpu
[2026-01-09 23:52:25] 2026-01-09 22:51:34,183 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 23:52:25] 2026-01-09 22:51:35,554 | INFO     | time since job start (5844s) is within the limit (349056.0s)
[2026-01-09 23:52:25] 2026-01-09 22:51:37,307 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 23:52:25] 2026-01-09 22:51:37,309 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3227.1754374999996
[2026-01-09 23:52:25] 2026-01-09 22:51:37,310 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6963162480/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 23:52:25] 2026-01-09 22:51:37,311 | INFO     | extracted standard info from prmon json
[2026-01-09 23:52:25] 2026-01-09 22:51:37,311 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 23:52:25] 2026-01-09 22:51:37,311 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 23:52:25] 2026-01-09 22:51:37,311 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 23:52:25] 2026-01-09 22:51:37,311 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 23:52:25] 2026-01-09 22:51:37,312 | INFO     | fitting pss+swap vs Time
[2026-01-09 23:52:25] 2026-01-09 22:51:37,312 | INFO     | sum of square deviations: 218571540.0
[2026-01-09 23:52:25] 2026-01-09 22:51:37,312 | INFO     | sum of deviations: -18282365876.000004
[2026-01-09 23:52:25] 2026-01-09 22:51:37,312 | INFO     | mean x: 1767996263.0
[2026-01-09 23:52:25] 2026-01-09 22:51:37,312 | INFO     | mean y: 2602958.662921348
[2026-01-09 23:52:25] 2026-01-09 22:51:37,312 | INFO     | intersect: 147886241183.3226
[2026-01-09 23:52:25] 2026-01-09 22:51:37,312 | INFO     | chi2: 0.10499290470148626
[2026-01-09 23:52:25] 2026-01-09 22:51:37,312 | INFO     | current memory leak: -83.64 B/s (using 89 data points, chi2=0.10)
[2026-01-09 23:52:25] 2026-01-09 22:51:37,312 | INFO     | could have reported an average CPU frequency of 3668 MHz (7 samples)
[2026-01-09 23:52:25] 2026-01-09 22:51:37,313 | INFO     | ..............................
[2026-01-09 23:52:25] 2026-01-09 22:51:37,313 | INFO     | . Timing measurements:
[2026-01-09 23:52:25] 2026-01-09 22:51:37,313 | INFO     | . get job = 0 s
[2026-01-09 23:52:25] 2026-01-09 22:51:37,313 | INFO     | . initial setup = 1 s
[2026-01-09 23:52:25] 2026-01-09 22:51:37,313 | INFO     | . payload setup = 4 s
[2026-01-09 23:52:25] 2026-01-09 22:51:37,313 | INFO     | . stage-in = 0 s
[2026-01-09 23:52:25] 2026-01-09 22:51:37,313 | INFO     | . payload execution = 5819 s
[2026-01-09 23:52:25] 2026-01-09 22:51:37,313 | INFO     | . stage-out = 0 s
[2026-01-09 23:52:25] 2026-01-09 22:51:37,313 | INFO     | . log creation = 0 s
[2026-01-09 23:52:25] 2026-01-09 22:51:37,313 | INFO     | ..............................
[2026-01-09 23:52:25] 2026-01-09 22:51:37,352 | INFO     | 
[2026-01-09 23:52:25] 2026-01-09 22:51:37,353 | INFO     | job summary report
[2026-01-09 23:52:25] 2026-01-09 22:51:37,353 | INFO     | --------------------------------------------------
[2026-01-09 23:52:25] 2026-01-09 22:51:37,353 | INFO     | PanDA job id: 6963162480
[2026-01-09 23:52:25] 2026-01-09 22:51:37,353 | INFO     | task id: 47898826
[2026-01-09 23:52:25] 2026-01-09 22:51:37,353 | INFO     | errors: (none)
[2026-01-09 23:52:25] 2026-01-09 22:51:37,353 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 23:52:25] 2026-01-09 22:51:37,353 | INFO     | pilot state: finished 
[2026-01-09 23:52:25] 2026-01-09 22:51:37,353 | INFO     | transexitcode: 0
[2026-01-09 23:52:25] 2026-01-09 22:51:37,353 | INFO     | exeerrorcode: 0
[2026-01-09 23:52:25] 2026-01-09 22:51:37,353 | INFO     | exeerrordiag: 
[2026-01-09 23:52:25] 2026-01-09 22:51:37,353 | INFO     | exitcode: 0
[2026-01-09 23:52:25] 2026-01-09 22:51:37,353 | INFO     | exitmsg: OK
[2026-01-09 23:52:25] 2026-01-09 22:51:37,353 | INFO     | cpuconsumptiontime: 22325 s
[2026-01-09 23:52:25] 2026-01-09 22:51:37,353 | INFO     | nevents: 400
[2026-01-09 23:52:25] 2026-01-09 22:51:37,353 | INFO     | neventsw: 0
[2026-01-09 23:52:25] 2026-01-09 22:51:37,353 | INFO     | pid: 2436524
[2026-01-09 23:52:25] 2026-01-09 22:51:37,353 | INFO     | pgrp: 2436524
[2026-01-09 23:52:25] 2026-01-09 22:51:37,353 | INFO     | corecount: 4
[2026-01-09 23:52:25] 2026-01-09 22:51:37,353 | INFO     | event service: False
[2026-01-09 23:52:25] 2026-01-09 22:51:37,353 | INFO     | sizes: {0: 2283972, 4: 2284234, 11: 2284262, 5826: 2311094, 5827: 2320153, 5829: 2320153, 5832: 2320475}
[2026-01-09 23:52:25] 2026-01-09 22:51:37,353 | INFO     | --------------------------------------------------
[2026-01-09 23:52:25] 2026-01-09 22:51:37,354 | INFO     | 
[2026-01-09 23:52:25] 2026-01-09 22:51:37,354 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-09 23:52:25] 2026-01-09 22:51:37,371 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 23:52:25] 2026-01-09 22:51:37,371 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 23:52:25] 2026-01-09 22:51:37,371 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 23:52:25] 2026-01-09 22:51:37,371 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 23:52:25] 2026-01-09 22:51:37,371 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 23:52:25] 2026-01-09 22:51:37,371 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 23:52:25] 2026-01-09 22:51:37,371 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 23:52:25] 2026-01-09 22:51:37,372 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 23:52:25] 2026-01-09 22:51:37,372 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 23:52:25] 2026-01-09 22:51:37,372 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 23:52:25] 2026-01-09 22:51:37,372 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 23:52:25] 2026-01-09 22:51:37,372 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 23:52:25] 2026-01-09 22:51:37,372 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 23:52:25] 2026-01-09 22:51:37,372 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 23:52:25] 2026-01-09 22:51:37,372 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 23:52:25] 2026-01-09 22:51:37,372 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 23:52:25] 2026-01-09 22:51:37,372 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 23:52:25] 2026-01-09 22:51:37,372 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 23:52:25] 2026-01-09 22:51:37,372 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 23:52:25] 2026-01-09 22:51:37,372 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 23:52:25] 2026-01-09 22:51:37,372 | INFO     | job 6963162480 has completed (purged errors)
[2026-01-09 23:52:25] 2026-01-09 22:51:37,372 | INFO     | overall cleanup function is called
[2026-01-09 23:52:25] 2026-01-09 22:51:37,423 | WARNING  | process 2436524 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 23:52:25] 2026-01-09 22:51:37,453 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 23:52:25] 2026-01-09 22:51:37,453 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 23:52:25] 2026-01-09 22:51:37,453 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-09 23:52:25] 2026-01-09 22:51:37,453 | WARNING  | maxPSS not found in memory monitor output
[2026-01-09 23:52:25] 2026-01-09 22:51:37,454 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6963162480/payload.stdout) since it has not been created yet
[2026-01-09 23:52:25] 2026-01-09 22:51:37,454 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-09 23:52:25] 2026-01-09 22:51:37,467 | INFO     | sufficient remaining disk space (239078473728 B)
[2026-01-09 23:52:25] 2026-01-09 22:51:37,468 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-09 23:52:25] 2026-01-09 22:51:37,468 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6963162480/HITS.47898826._034101.pool.root.1 since it does not exist
[2026-01-09 23:52:25] 2026-01-09 22:51:37,505 | INFO     | number of running child processes to parent process 2436524: 1
[2026-01-09 23:52:25] 2026-01-09 22:51:37,506 | INFO     | maximum number of monitored processes: 6
[2026-01-09 23:52:25] 2026-01-09 22:51:37,506 | INFO     | aborting job monitoring since job object (job id=6963162480) has expired
[2026-01-09 23:52:25] 2026-01-09 22:51:38,379 | INFO     | --- collectZombieJob: --- 10, [2436524]
[2026-01-09 23:52:25] 2026-01-09 22:51:38,379 | INFO     | zombie collector waiting for pid 2436524
[2026-01-09 23:52:25] 2026-01-09 22:51:38,379 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 23:52:25] 2026-01-09 22:51:38,379 | INFO     | collected zombie processes
[2026-01-09 23:52:25] 2026-01-09 22:51:38,379 | INFO     | will attempt to kill all subprocesses of pid=2436524
[2026-01-09 23:52:25] 2026-01-09 22:51:38,419 | INFO     | process IDs to be killed: [2436524] (in reverse order)
[2026-01-09 23:52:25] 2026-01-09 22:51:38,449 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 23:52:25] 2026-01-09 22:51:38,449 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 23:52:25] 2026-01-09 22:51:38,451 | INFO     | did not find any defunct processes belonging to 2436524
[2026-01-09 23:52:25] 2026-01-09 22:51:38,452 | INFO     | did not find any defunct processes belonging to 2436524
[2026-01-09 23:52:25] 2026-01-09 22:51:38,452 | INFO     | ready for new job
[2026-01-09 23:52:25] 2026-01-09 22:51:38,452 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 23:52:25] 2026-01-09 22:51:38,453 | INFO     | ***************************************
[2026-01-09 23:52:25] 2026-01-09 22:51:38,453 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 23:52:25] 2026-01-09 22:51:38,453 | INFO     | ***************************************
[2026-01-09 23:52:25] 2026-01-09 22:51:38,453 | INFO     | 
[2026-01-09 23:52:25] 2026-01-09 22:51:38,454 | INFO     | architecture information:
[2026-01-09 23:52:25] 2026-01-09 22:51:38,454 | INFO     | executing command: cat /etc/os-release
[2026-01-09 23:52:25] 2026-01-09 22:51:38,466 | INFO     | cat /etc/os-release:
[2026-01-09 23:52:25] NAME="CentOS Linux"
[2026-01-09 23:52:25] VERSION="7 (Core)"
[2026-01-09 23:52:25] ID="centos"
[2026-01-09 23:52:25] ID_LIKE="rhel fedora"
[2026-01-09 23:52:25] VERSION_ID="7"
[2026-01-09 23:52:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 23:52:25] ANSI_COLOR="0;31"
[2026-01-09 23:52:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 23:52:25] HOME_URL="https://www.centos.org/"
[2026-01-09 23:52:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 23:52:25] 
[2026-01-09 23:52:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 23:52:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 23:52:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 23:52:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 23:52:25] 
[2026-01-09 23:52:25] 2026-01-09 22:51:38,467 | INFO     | ***************************************
[2026-01-09 23:52:25] 2026-01-09 22:51:38,970 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-09 23:52:25] 2026-01-09 22:51:38,987 | INFO     | sufficient remaining disk space (239078473728 B)
[2026-01-09 23:52:25] 2026-01-09 22:51:38,987 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 23:52:25] 2026-01-09 22:51:38,987 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 23:52:25] 2026-01-09 22:51:38,987 | INFO     | update_server=False
[2026-01-09 23:52:25] 2026-01-09 22:51:38,987 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 23:52:25] 2026-01-09 22:51:38,987 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 23:52:25] 2026-01-09 22:51:38,988 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:52:25] 2026-01-09 22:51:38,988 | INFO     | aborting loop
[2026-01-09 23:52:25] 2026-01-09 22:51:38,988 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:52:25] 2026-01-09 22:51:39,826 | INFO     | all job control threads have been joined
[2026-01-09 23:52:25] 2026-01-09 22:51:39,919 | INFO     | all data control threads have been joined
[2026-01-09 23:52:25] 2026-01-09 22:51:39,993 | INFO     | [job] retrieve thread has finished
[2026-01-09 23:52:25] 2026-01-09 22:51:39,993 | INFO     | [job] job monitor thread has finished
[2026-01-09 23:52:25] 2026-01-09 22:51:39,994 | INFO     | [job] queue monitor thread has finished
[2026-01-09 23:52:25] 2026-01-09 22:51:40,105 | INFO     | [data] copytool_in thread has finished
[2026-01-09 23:52:25] 2026-01-09 22:51:40,171 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 23:52:25] 2026-01-09 22:51:40,395 | INFO     | all payload control threads have been joined
[2026-01-09 23:52:25] 2026-01-09 22:51:40,479 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 23:52:25] 2026-01-09 22:51:40,657 | INFO     | [payload] failed_post thread has finished
[2026-01-09 23:52:25] 2026-01-09 22:51:40,832 | INFO     | [job] control thread has finished
[2026-01-09 23:52:25] 2026-01-09 22:51:40,924 | INFO     | [data] control thread has finished
[2026-01-09 23:52:25] 2026-01-09 22:51:40,952 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 23:52:25] 2026-01-09 22:51:40,993 | INFO     | [data] copytool_out thread has finished
[2026-01-09 23:52:25] 2026-01-09 22:51:41,119 | INFO     | [job] validate thread has finished
[2026-01-09 23:52:25] 2026-01-09 22:51:41,167 | INFO     | [payload] validate_post thread has finished
[2026-01-09 23:52:25] 2026-01-09 22:51:41,188 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 23:52:25] 2026-01-09 22:51:41,321 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 23:52:25] 2026-01-09 22:51:41,401 | INFO     | [payload] control thread has finished
[2026-01-09 23:52:25] 2026-01-09 22:51:44,178 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 23:52:25] 2026-01-09 22:52:08,670 | INFO     | PID=2429970 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 23:52:25] 2026-01-09 22:52:08,671 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 23:52:25] 2026-01-09 22:52:08,671 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 23:52:25] 2026-01-09 22:52:08,671 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 23:52:25] 2026-01-09 22:52:18,765 | INFO     | [monitor] cgroup control has ended
[2026-01-09 23:52:25] 2026-01-09 22:52:19,871 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140668135720768)>', '<ExcThread(monitor, started 140667418306304)>']
[2026-01-09 23:52:25] 2026-01-09 22:52:20,732 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 23:52:25] 2026-01-09 22:52:20,732 | INFO     | [monitor] control thread has ended
[2026-01-09 23:52:25] 2026-01-09 22:52:24,898 | INFO     | all workflow threads have been joined
[2026-01-09 23:52:25] 2026-01-09 22:52:24,899 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 23:52:25] 2026-01-09 22:52:24,899 | INFO     | traces error code: 0
[2026-01-09 23:52:25] 2026-01-09 22:52:24,899 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 23:52:25] 2026-01-09 22:52:24,975 [wrapper] ==== pilot stdout END ====
[2026-01-09 23:52:25] 2026-01-09 22:52:24,979 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 23:52:25] 2026-01-09 22:52:24,983 [wrapper] pilotpid: 2429970
[2026-01-09 23:52:25] 2026-01-09 22:52:24,987 [wrapper] Pilot exit status: 0
[2026-01-09 23:52:25] 2026-01-09 22:52:24,999 [wrapper] pandaids: 6963162480
[2026-01-09 23:52:25] 2026-01-09 22:52:25,019 [wrapper] cleanup supervisor_pilot 2448656 2429971
[2026-01-09 23:52:25] 2026-01-09 22:52:25,023 [wrapper] Test setup, not cleaning
[2026-01-09 23:52:25] 2026-01-09 22:52:25,027 [wrapper] apfmon messages muted
[2026-01-09 23:52:25] 2026-01-09 22:52:25,030 [wrapper] ==== wrapper stdout END ====
[2026-01-09 23:52:25] 2026-01-09 22:52:25,034 [wrapper] ==== wrapper stderr END ====
[2026-01-09 23:52:25]  *** Error codes and diagnostics ***
[2026-01-09 23:52:25]     "exeErrorCode": 0,
[2026-01-09 23:52:25]     "exeErrorDiag": "",
[2026-01-09 23:52:25]     "pilotErrorCode": 0,
[2026-01-09 23:52:25]     "pilotErrorDiag": "",
[2026-01-09 23:52:25]  *** Listing of results directory ***
[2026-01-09 23:52:25] total 438116
[2026-01-09 23:52:25] -rw-r--r-- 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-09 23:52:25] -rwx------ 1 boinc boinc     36322 Jan  9 01:58 runpilot2-wrapper.sh
[2026-01-09 23:52:25] -rw-r--r-- 1 boinc boinc      5112 Jan  9 02:01 queuedata.json
[2026-01-09 23:52:25] -rw-r--r-- 1 boinc boinc       100 Jan  9 22:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 23:52:25] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 22:14 run_atlas
[2026-01-09 23:52:25] -rw-r--r-- 1 boinc boinc       105 Jan  9 22:14 job.xml
[2026-01-09 23:52:25] -rw-r--r-- 2 boinc boinc 224757998 Jan  9 22:14 EVNT.47898824._001300.pool.root.1
[2026-01-09 23:52:25] -rw-r--r-- 2 boinc boinc    592400 Jan  9 22:14 input.tar.gz
[2026-01-09 23:52:25] -rw-r--r-- 2 boinc boinc     15847 Jan  9 22:14 start_atlas.sh
[2026-01-09 23:52:25] drwxrwx--x 2 boinc boinc      4096 Jan  9 22:14 shared
[2026-01-09 23:52:25] -rw-r--r-- 1 boinc boinc         0 Jan  9 22:14 boinc_setup_complete
[2026-01-09 23:52:25] -rw-r--r-- 1 boinc boinc      6377 Jan  9 22:14 init_data.xml
[2026-01-09 23:52:25] -rw-r--r-- 1 boinc boinc         0 Jan  9 22:14 boinc_lockfile
[2026-01-09 23:52:25] -rw-r--r-- 1 boinc boinc      2519 Jan  9 22:14 pandaJob.out
[2026-01-09 23:52:25] -rw------- 1 boinc boinc    989381 Jan  9 22:14 agis_schedconf.cvmfs.json
[2026-01-09 23:52:25] -rw------- 1 boinc boinc   1516240 Jan  9 22:14 agis_ddmendpoints.agis.ALL.json
[2026-01-09 23:52:25] drwx------ 5 boinc boinc      4096 Jan  9 22:14 pilot3
[2026-01-09 23:52:25] -rw------- 1 boinc boinc 217720445 Jan  9 23:51 HITS.47898826._034101.pool.root.1
[2026-01-09 23:52:25] -rw-r--r-- 1 boinc boinc       529 Jan  9 23:51 boinc_task_state.xml
[2026-01-09 23:52:25] -rw------- 1 boinc boinc      1019 Jan  9 23:51 memory_monitor_summary.json
[2026-01-09 23:52:25] -rw------- 1 boinc boinc    267818 Jan  9 23:51 log.47898826._034101.job.log.tgz.1
[2026-01-09 23:52:25] -rw------- 1 boinc boinc      7765 Jan  9 23:51 heartbeat.json
[2026-01-09 23:52:25] -rw------- 1 boinc boinc        95 Jan  9 23:52 pilot_heartbeat.json
[2026-01-09 23:52:25] -rw-r--r-- 1 boinc boinc      8192 Jan  9 23:52 boinc_mmap_file
[2026-01-09 23:52:25] -rw-r--r-- 1 boinc boinc        27 Jan  9 23:52 wrapper_checkpoint.txt
[2026-01-09 23:52:25] -rw------- 1 boinc boinc      4752 Jan  9 23:52 pilotlog.txt
[2026-01-09 23:52:25] -rw------- 1 boinc boinc    850208 Jan  9 23:52 log.47898826._034101.job.log.1
[2026-01-09 23:52:25] -rw------- 1 boinc boinc       357 Jan  9 23:52 output.list
[2026-01-09 23:52:25] -rw-r--r-- 1 boinc boinc       620 Jan  9 23:52 runtime_log
[2026-01-09 23:52:25] -rw------- 1 boinc boinc   1136640 Jan  9 23:52 result.tar.gz
[2026-01-09 23:52:25] -rw------- 1 boinc boinc       660 Jan  9 23:52 xfILDmy0Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2hgKDmEC8zYn.diag
[2026-01-09 23:52:25] -rw-r--r-- 1 boinc boinc      8902 Jan  9 23:52 runtime_log.err
[2026-01-09 23:52:25] -rw-r--r-- 1 boinc boinc     22249 Jan  9 23:52 stderr.txt
[2026-01-09 23:52:25] HITS file was successfully produced:
[2026-01-09 23:52:25] -rw------- 1 boinc boinc 217720445 Jan  9 23:51 shared/HITS.pool.root.1
[2026-01-09 23:52:25]  *** Contents of shared directory: ***
[2026-01-09 23:52:25] total 433828
[2026-01-09 23:52:25] -rw-r--r-- 2 boinc boinc 224757998 Jan  9 22:14 ATLAS.root_0
[2026-01-09 23:52:25] -rw-r--r-- 2 boinc boinc    592400 Jan  9 22:14 input.tar.gz
[2026-01-09 23:52:25] -rw-r--r-- 2 boinc boinc     15847 Jan  9 22:14 start_atlas.sh
[2026-01-09 23:52:25] -rw------- 1 boinc boinc 217720445 Jan  9 23:51 HITS.pool.root.1
[2026-01-09 23:52:25] -rw------- 1 boinc boinc   1136640 Jan  9 23:52 result.tar.gz
23:52:26 (2426167): run_atlas exited; CPU time 22343.068556
23:52:26 (2426167): called boinc_finish(0)

</stderr_txt>
]]>

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