Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:07:08 (971976): wrapper (7.7.26015): starting
23:07:08 (971976): wrapper: running run_atlas (--nthreads 12)
[2026-01-08 23:07:08] Arguments: --nthreads 12
[2026-01-08 23:07:08] Threads: 12
[2026-01-08 23:07:08] Checking for CVMFS
[2026-01-08 23:07:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 23:07:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 23:07:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 23:07:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 23:07:09] 2.11.5.0 2097640 91130 206236 154934 0 412 43182655 45568001 14532 130560 0 699864019 99.768 466799234 19518 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-01-08 23:07:09] CVMFS is ok
[2026-01-08 23:07:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 23:07:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 23:07:09] Further information can be found at the LHC@home message board.
[2026-01-08 23:07:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 23:07:09] Checking for apptainer binary...
[2026-01-08 23:07:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 23:07:09] Running /usr/bin/apptainer --version
[2026-01-08 23:07:09] apptainer version 1.4.1-1.el9
[2026-01-08 23:07:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 23:07:10] wns0049.triumf.lcg
[2026-01-08 23:07:10] apptainer works
[2026-01-08 23:07:10] Set ATHENA_PROC_NUMBER=12
[2026-01-08 23:07:10] Set ATHENA_CORE_NUMBER=12
[2026-01-08 23:07:10] Starting ATLAS job with PandaID=6963162600
[2026-01-08 23:07:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 23:12:42]  *** The last 200 lines of the pilot log: ***
[2026-01-08 23:12:42] 2026-01-09 07:11:32,892 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 23:12:42] 2026-01-09 07:11:32,913 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 23:12:42] 2026-01-09 07:11:32,913 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 23:12:42] 2026-01-09 07:11:32,914 | WARNING  | wrong length of table data, x=[1767942519.0], y=[1138.0] (must be same and length>=4)
[2026-01-08 23:12:42] 2026-01-09 07:11:32,914 | INFO     | could have reported an average CPU frequency of 2643 MHz (4 samples)
[2026-01-08 23:12:42] 2026-01-09 07:11:32,914 | INFO     | ..............................
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | . Timing measurements:
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | . get job = 0 s
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | . initial setup = 3 s
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | . payload setup = 12 s
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | . stage-in = 0 s
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | . payload execution = 42 s
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | . stage-out = 1 s
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | . log creation = 0 s
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | ..............................
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963162600/pilotlog.txt
[2026-01-08 23:12:42] 2026-01-09 07:11:33,051 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-08 23:12:42] - Log from pilotlog.txt -
[2026-01-08 23:12:42] 2026-01-09 07:11:32,875 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963162600/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 23:12:42] 2026-01-09 07:11:32,892 | INFO     | extracted standard info from prmon json
[2026-01-08 23:12:42] 2026-01-09 07:11:32,892 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 23:12:42] 2026-01-09 07:11:32,892 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 23:12:42] 2026-01-09 07:11:32,913 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 23:12:42] 2026-01-09 07:11:32,913 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 23:12:42] 2026-01-09 07:11:32,914 | WARNING  | wrong length of table data, x=[1767942519.0], y=[1138.0] (must be same and length>=4)
[2026-01-08 23:12:42] 2026-01-09 07:11:32,914 | INFO     | could have reported an average CPU frequency of 2643 MHz (4 samples)
[2026-01-08 23:12:42] 2026-01-09 07:11:32,914 | INFO     | ..............................
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | . Timing measurements:
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | . get job = 0 s
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | . initial setup = 3 s
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | . payload setup = 12 s
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | . stage-in = 0 s
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | . payload execution = 42 s
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | . stage-out = 1 s
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | . log creation = 0 s
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | ..............................
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963162600/pilotlog.txt
[2026-01-08 23:12:42] 2026-01-09 07:11:33,052 | WARNING  | 
[2026-01-08 23:12:42] [begin log extracts]
[2026-01-08 23:12:42] - Log from pilotlog.txt -
[2026-01-08 23:12:42] 2026-01-09 07:11:32,875 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6963162600/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 23:12:42] 2026-01-09 07:11:32,892 | INFO     | extracted standard info from prmon json
[2026-01-08 23:12:42] 2026-01-09 07:11:32,892 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 23:12:42] 2026-01-09 07:11:32,892 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 23:12:42] 2026-01-09 07:11:32,913 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 23:12:42] 2026-01-09 07:11:32,913 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 23:12:42] 2026-01-09 07:11:32,914 | WARNING  | wrong length of table data, x=[1767942519.0], y=[1138.0] (must be same and length>=4)
[2026-01-08 23:12:42] 2026-01-09 07:11:32,914 | INFO     | could have reported an average CPU frequency of 2643 MHz (4 samples)
[2026-01-08 23:12:42] 2026-01-09 07:11:32,914 | INFO     | ..............................
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | . Timing measurements:
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | . get job = 0 s
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | . initial setup = 3 s
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | . payload setup = 12 s
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | . stage-in = 0 s
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | . payload execution = 42 s
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | . stage-out = 1 s
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | . log creation = 0 s
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | ..............................
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-08 23:12:42] 2026-01-09 07:11:32,915 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6963162600/pilotlog.txt
[2026-01-08 23:12:42] [end log extracts]
[2026-01-08 23:12:42] 2026-01-09 07:11:33,053 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-08 23:12:42] 2026-01-09 07:11:33,054 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-08 23:12:42] 2026-01-09 07:11:33,793 | INFO     | 
[2026-01-08 23:12:42] 2026-01-09 07:11:33,793 | INFO     | job summary report
[2026-01-08 23:12:42] 2026-01-09 07:11:33,793 | INFO     | --------------------------------------------------
[2026-01-08 23:12:42] 2026-01-09 07:11:33,794 | INFO     | PanDA job id: 6963162600
[2026-01-08 23:12:42] 2026-01-09 07:11:33,794 | INFO     | task id: 47898826
[2026-01-08 23:12:42] 2026-01-09 07:11:33,794 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-08 23:08:59,789 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-08 23:12:42] 2026-01-09 07:11:33,794 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 23:12:42] 2026-01-09 07:11:33,794 | INFO     | pilot state: failed 
[2026-01-08 23:12:42] 2026-01-09 07:11:33,794 | INFO     | transexitcode: 65
[2026-01-08 23:12:42] 2026-01-09 07:11:33,794 | INFO     | exeerrorcode: 65
[2026-01-08 23:12:42] 2026-01-09 07:11:33,794 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 23:12:42] 2026-01-09 07:11:33,794 | INFO     | exitcode: 65
[2026-01-08 23:12:42] 2026-01-09 07:11:33,794 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-08 23:12:42] 2026-01-09 07:11:33,794 | INFO     | cpuconsumptiontime: 17 s
[2026-01-08 23:12:42] 2026-01-09 07:11:33,794 | INFO     | nevents: 0
[2026-01-08 23:12:42] 2026-01-09 07:11:33,794 | INFO     | neventsw: 0
[2026-01-08 23:12:42] 2026-01-09 07:11:33,794 | INFO     | pid: 986055
[2026-01-08 23:12:42] 2026-01-09 07:11:33,794 | INFO     | pgrp: 986055
[2026-01-08 23:12:42] 2026-01-09 07:11:33,794 | INFO     | corecount: 12
[2026-01-08 23:12:42] 2026-01-09 07:11:33,794 | INFO     | event service: False
[2026-01-08 23:12:42] 2026-01-09 07:11:33,794 | INFO     | sizes: {0: 2283968, 11: 2283968, 18: 2284258, 22: 2284286, 59: 2307538, 62: 2311830, 66: 2311986, 204: 2312152}
[2026-01-08 23:12:42] 2026-01-09 07:11:33,794 | INFO     | --------------------------------------------------
[2026-01-08 23:12:42] 2026-01-09 07:11:33,794 | INFO     | 
[2026-01-08 23:12:42] 2026-01-09 07:11:33,795 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-08 23:12:42] 2026-01-09 07:11:33,897 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 23:12:42] 2026-01-09 07:11:33,898 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 23:12:42] 2026-01-09 07:11:33,898 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 23:12:42] 2026-01-09 07:11:33,898 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 23:12:42] 2026-01-09 07:11:33,898 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 23:12:42] 2026-01-09 07:11:33,898 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 23:12:42] 2026-01-09 07:11:33,898 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 23:12:42] 2026-01-09 07:11:33,898 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 23:12:42] 2026-01-09 07:11:33,901 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 23:12:42] 2026-01-09 07:11:33,901 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 23:12:42] 2026-01-09 07:11:33,901 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 23:12:42] 2026-01-09 07:11:33,901 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 23:12:42] 2026-01-09 07:11:33,902 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 23:12:42] 2026-01-09 07:11:33,902 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 23:12:42] 2026-01-09 07:11:33,902 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 23:12:42] 2026-01-09 07:11:33,902 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 23:12:42] 2026-01-09 07:11:33,902 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 23:12:42] 2026-01-09 07:11:33,902 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 23:12:42] 2026-01-09 07:11:33,902 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 23:12:42] 2026-01-09 07:11:33,902 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 23:12:42] 2026-01-09 07:11:33,902 | INFO     | job 6963162600 has completed (purged errors)
[2026-01-08 23:12:42] 2026-01-09 07:11:33,902 | INFO     | overall cleanup function is called
[2026-01-08 23:12:42] 2026-01-09 07:11:34,910 | INFO     | --- collectZombieJob: --- 10, [986055]
[2026-01-08 23:12:42] 2026-01-09 07:11:34,910 | INFO     | zombie collector waiting for pid 986055
[2026-01-08 23:12:42] 2026-01-09 07:11:34,910 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 23:12:42] 2026-01-09 07:11:34,910 | INFO     | collected zombie processes
[2026-01-08 23:12:42] 2026-01-09 07:11:34,911 | INFO     | will attempt to kill all subprocesses of pid=986055
[2026-01-08 23:12:42] 2026-01-09 07:11:35,836 | INFO     | process IDs to be killed: [986055] (in reverse order)
[2026-01-08 23:12:42] 2026-01-09 07:11:35,975 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 23:12:42] 2026-01-09 07:11:35,975 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 23:12:42] 2026-01-09 07:11:36,009 | INFO     | did not find any defunct processes belonging to 986055
[2026-01-08 23:12:42] 2026-01-09 07:11:36,018 | INFO     | did not find any defunct processes belonging to 986055
[2026-01-08 23:12:42] 2026-01-09 07:11:36,018 | INFO     | ready for new job
[2026-01-08 23:12:42] 2026-01-09 07:11:36,018 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 23:12:42] 2026-01-09 07:11:36,020 | INFO     | ***************************************
[2026-01-08 23:12:42] 2026-01-09 07:11:36,020 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 23:12:42] 2026-01-09 07:11:36,020 | INFO     | ***************************************
[2026-01-08 23:12:42] 2026-01-09 07:11:36,020 | INFO     | 
[2026-01-08 23:12:42] 2026-01-09 07:11:36,022 | INFO     | architecture information:
[2026-01-08 23:12:42] 2026-01-09 07:11:36,022 | INFO     | executing command: cat /etc/os-release
[2026-01-08 23:12:42] 2026-01-09 07:11:36,038 | INFO     | cat /etc/os-release:
[2026-01-08 23:12:42] NAME="CentOS Linux"
[2026-01-08 23:12:42] VERSION="7 (Core)"
[2026-01-08 23:12:42] ID="centos"
[2026-01-08 23:12:42] ID_LIKE="rhel fedora"
[2026-01-08 23:12:42] VERSION_ID="7"
[2026-01-08 23:12:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 23:12:42] ANSI_COLOR="0;31"
[2026-01-08 23:12:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 23:12:42] HOME_URL="https://www.centos.org/"
[2026-01-08 23:12:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 23:12:42] 
[2026-01-08 23:12:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 23:12:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 23:12:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 23:12:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 23:12:42] 
[2026-01-08 23:12:42] 2026-01-09 07:11:36,039 | INFO     | ***************************************
[2026-01-08 23:12:42] 2026-01-09 07:11:36,542 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-08 23:12:42] 2026-01-09 07:11:36,661 | INFO     | sufficient remaining disk space (1624532582400 B)
[2026-01-08 23:12:42] 2026-01-09 07:11:36,661 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 23:12:42] 2026-01-09 07:11:36,661 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 23:12:42] 2026-01-09 07:11:36,661 | INFO     | update_server=False
[2026-01-08 23:12:42] 2026-01-09 07:11:36,661 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 23:12:42] 2026-01-09 07:11:36,759 | INFO     | all payload control threads have been joined
[2026-01-08 23:12:42] 2026-01-09 07:11:37,125 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 23:12:42] 2026-01-09 07:11:37,274 | INFO     | all job control threads have been joined
[2026-01-08 23:12:42] 2026-01-09 07:11:37,362 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:12:42] 2026-01-09 07:11:37,362 | INFO     | aborting loop
[2026-01-08 23:12:42] 2026-01-09 07:11:37,475 | INFO     | all data control threads have been joined
[2026-01-08 23:12:42] 2026-01-09 07:11:37,667 | INFO     | [job] retrieve thread has finished
[2026-01-08 23:12:42] 2026-01-09 07:11:37,674 | INFO     | [payload] validate_post thread has finished
[2026-01-08 23:12:42] 2026-01-09 07:11:37,765 | INFO     | [payload] control thread has finished
[2026-01-08 23:12:42] 2026-01-09 07:11:38,001 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 23:12:42] 2026-01-09 07:11:38,203 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 23:12:42] 2026-01-09 07:11:38,260 | INFO     | [job] validate thread has finished
[2026-01-08 23:12:42] 2026-01-09 07:11:38,261 | INFO     | [data] copytool_in thread has finished
[2026-01-08 23:12:42] 2026-01-09 07:11:38,289 | INFO     | [job] control thread has finished
[2026-01-08 23:12:42] 2026-01-09 07:11:38,368 | INFO     | [job] job monitor thread has finished
[2026-01-08 23:12:42] 2026-01-09 07:11:38,481 | INFO     | [data] control thread has finished
[2026-01-08 23:12:42] 2026-01-09 07:11:38,596 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 23:12:42] 2026-01-09 07:11:38,693 | INFO     | [payload] failed_post thread has finished
[2026-01-08 23:12:42] 2026-01-09 07:11:38,707 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 23:12:42] 2026-01-09 07:11:38,817 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 23:12:42] 2026-01-09 07:11:39,006 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 23:12:42] 2026-01-09 07:11:39,823 | INFO     | [job] queue monitor thread has finished
[2026-01-08 23:12:42] 2026-01-09 07:11:40,008 | INFO     | [data] copytool_out thread has finished
[2026-01-08 23:12:42] 2026-01-09 07:11:41,135 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 23:12:42] 2026-01-09 07:12:05,777 | INFO     | PID=979193 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 23:12:42] 2026-01-09 07:12:05,777 | INFO     | .. there are 35 such processes running
[2026-01-08 23:12:42] 2026-01-09 07:12:05,778 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 23:12:42] 2026-01-09 07:12:05,778 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 23:12:42] 2026-01-09 07:12:05,778 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 23:12:42] 2026-01-09 07:12:33,751 | INFO     | [monitor] cgroup control has ended
[2026-01-08 23:12:42] 2026-01-09 07:12:35,636 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140689457452864)>', '<ExcThread(monitor, started 140688675030784)>']
[2026-01-08 23:12:42] 2026-01-09 07:12:35,978 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 23:12:42] 2026-01-09 07:12:35,978 | INFO     | [monitor] control thread has ended
[2026-01-08 23:12:42] 2026-01-09 07:12:40,662 | INFO     | all workflow threads have been joined
[2026-01-08 23:12:42] 2026-01-09 07:12:40,662 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 23:12:42] 2026-01-09 07:12:40,663 | INFO     | traces error code: 0
[2026-01-08 23:12:42] 2026-01-09 07:12:40,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 23:12:42] 2026-01-09 07:12:41,741 [wrapper] ==== pilot stdout END ====
[2026-01-08 23:12:42] 2026-01-09 07:12:41,770 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 23:12:42] 2026-01-09 07:12:41,786 [wrapper] pilotpid: 979193
[2026-01-08 23:12:42] 2026-01-09 07:12:41,824 [wrapper] Pilot exit status: 0
[2026-01-08 23:12:42] 2026-01-09 07:12:41,982 [wrapper] pandaids: 6963162600
[2026-01-08 23:12:42] 2026-01-09 07:12:42,170 [wrapper] cleanup supervisor_pilot  979199 979194
[2026-01-08 23:12:42] 2026-01-09 07:12:42,173 [wrapper] Test setup, not cleaning
[2026-01-08 23:12:42] 2026-01-09 07:12:42,175 [wrapper] apfmon messages muted
[2026-01-08 23:12:42] 2026-01-09 07:12:42,176 [wrapper] ==== wrapper stdout END ====
[2026-01-08 23:12:42] 2026-01-09 07:12:42,180 [wrapper] ==== wrapper stderr END ====
[2026-01-08 23:12:42]  *** Error codes and diagnostics ***
[2026-01-08 23:12:42]     "exeErrorCode": 65,
[2026-01-08 23:12:42]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 23:12:42]     "pilotErrorCode": 1305,
[2026-01-08 23:12:42]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-08 23:12:42]  *** Listing of results directory ***
[2026-01-08 23:12:42] total 224824
[2026-01-08 23:12:42] -rw-r--r--. 1 boinc boinc    579449 Jan  8 16:57 pilot3.tar.gz
[2026-01-08 23:12:42] -rwx------. 1 boinc boinc     36322 Jan  8 16:58 runpilot2-wrapper.sh
[2026-01-08 23:12:42] -rw-r--r--. 1 boinc boinc      5112 Jan  8 17:01 queuedata.json
[2026-01-08 23:12:42] -rw-r--r--. 1 boinc boinc       100 Jan  8 23:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 23:12:42] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 23:07 run_atlas
[2026-01-08 23:12:42] -rw-r--r--. 1 boinc boinc       105 Jan  8 23:07 job.xml
[2026-01-08 23:12:42] -rw-r--r--. 1 boinc boinc      6594 Jan  8 23:07 init_data.xml
[2026-01-08 23:12:42] -rw-r--r--. 2 boinc boinc 226080778 Jan  8 23:07 EVNT.47898824._001302.pool.root.1
[2026-01-08 23:12:42] -rw-r--r--. 2 boinc boinc     15847 Jan  8 23:07 start_atlas.sh
[2026-01-08 23:12:42] drwxrwx--x. 2 boinc boinc      4096 Jan  8 23:07 shared
[2026-01-08 23:12:42] -rw-r--r--. 2 boinc boinc    592403 Jan  8 23:07 input.tar.gz
[2026-01-08 23:12:42] -rw-r--r--. 1 boinc boinc         0 Jan  8 23:07 boinc_lockfile
[2026-01-08 23:12:42] -rw-r--r--. 1 boinc boinc      2520 Jan  8 23:07 pandaJob.out
[2026-01-08 23:12:42] -rw-------. 1 boinc boinc    989771 Jan  8 23:07 agis_schedconf.cvmfs.json
[2026-01-08 23:12:42] -rw-------. 1 boinc boinc   1516240 Jan  8 23:07 agis_ddmendpoints.agis.ALL.json
[2026-01-08 23:12:42] drwx------. 5 boinc boinc      4096 Jan  8 23:07 pilot3
[2026-01-08 23:12:42] -rw-------. 1 boinc boinc       960 Jan  8 23:09 memory_monitor_summary.json
[2026-01-08 23:12:42] -rw-------. 1 boinc boinc     21797 Jan  8 23:09 log.47898826._034156.job.log.tgz.1
[2026-01-08 23:12:42] -rw-------. 1 boinc boinc      8400 Jan  8 23:11 heartbeat.json
[2026-01-08 23:12:42] -rw-------. 1 boinc boinc        95 Jan  8 23:11 pilot_heartbeat.json
[2026-01-08 23:12:42] -rw-r--r--. 1 boinc boinc       523 Jan  8 23:12 boinc_task_state.xml
[2026-01-08 23:12:42] -rw-r--r--. 1 boinc boinc      8192 Jan  8 23:12 boinc_mmap_file
[2026-01-08 23:12:42] -rw-r--r--. 1 boinc boinc        22 Jan  8 23:12 wrapper_checkpoint.txt
[2026-01-08 23:12:42] -rw-------. 1 boinc boinc      4822 Jan  8 23:12 pilotlog.txt
[2026-01-08 23:12:42] -rw-------. 1 boinc boinc     91330 Jan  8 23:12 log.47898826._034156.job.log.1
[2026-01-08 23:12:42] -rw-------. 1 boinc boinc       188 Jan  8 23:12 output.list
[2026-01-08 23:12:42] -rw-r--r--. 1 boinc boinc       620 Jan  8 23:12 runtime_log
[2026-01-08 23:12:42] -rw-------. 1 boinc boinc    133120 Jan  8 23:12 result.tar.gz
[2026-01-08 23:12:42] -rw-r--r--. 1 boinc boinc      8636 Jan  8 23:12 runtime_log.err
[2026-01-08 23:12:42] -rw-------. 1 boinc boinc       646 Jan  8 23:12 PRZNDmx0Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqvlKDmW54ixm.diag
[2026-01-08 23:12:42] -rw-r--r--. 1 boinc boinc     21782 Jan  8 23:12 stderr.txt
[2026-01-08 23:12:42] No HITS result produced
[2026-01-08 23:12:42]  *** Contents of shared directory: ***
[2026-01-08 23:12:42] total 221512
[2026-01-08 23:12:42] -rw-r--r--. 2 boinc boinc 226080778 Jan  8 23:07 ATLAS.root_0
[2026-01-08 23:12:42] -rw-r--r--. 2 boinc boinc     15847 Jan  8 23:07 start_atlas.sh
[2026-01-08 23:12:42] -rw-r--r--. 2 boinc boinc    592403 Jan  8 23:07 input.tar.gz
[2026-01-08 23:12:42] -rw-------. 1 boinc boinc    133120 Jan  8 23:12 result.tar.gz
23:12:43 (971976): run_atlas exited; CPU time 26.960714
23:12:43 (971976): called boinc_finish(0)

</stderr_txt>
]]>

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