Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
04:54:49 (4034892): wrapper (7.7.26015): starting
04:54:49 (4034892): wrapper: running run_atlas (--nthreads 3)
[2026-01-11 04:54:49] Arguments: --nthreads 3
[2026-01-11 04:54:49] Threads: 3
[2026-01-11 04:54:49] Checking for CVMFS
[2026-01-11 04:54:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 04:54:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 04:54:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 04:54:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 04:54:49] 2.12.7.0 3060303 5059 58368 155002 1 57 4065594 6144000 2751 130560 0 9923610 99.9779 263802 157 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2026-01-11 04:54:49] CVMFS is ok
[2026-01-11 04:54:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 04:54:49] Checking for apptainer binary...
[2026-01-11 04:54:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 04:54:49] Running /usr/bin/apptainer --version
[2026-01-11 04:54:49] apptainer version 1.4.5
[2026-01-11 04:54:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 04:54:49] Ryzen5
[2026-01-11 04:54:49] apptainer works
[2026-01-11 04:54:49] Set ATHENA_PROC_NUMBER=3
[2026-01-11 04:54:49] Set ATHENA_CORE_NUMBER=3
[2026-01-11 04:54:49] Starting ATLAS job with PandaID=6963162422
[2026-01-11 04:54:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 07:56:18]  *** The last 200 lines of the pilot log: ***
[2026-01-11 07:56:18] 2026-01-11 06:55:38,951 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 07:56:18] 2026-01-11 06:55:40,028 | INFO     | time since job start (10845s) is within the limit (349056.0s)
[2026-01-11 07:56:18] 2026-01-11 06:55:41,023 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 07:56:18] 2026-01-11 06:55:41,025 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3940.327125
[2026-01-11 07:56:18] 2026-01-11 06:55:41,028 | INFO     | using path: /var/lib/boinc/boinc/slots/0/PanDA_Pilot-6963162422/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 07:56:18] 2026-01-11 06:55:41,028 | INFO     | extracted standard info from prmon json
[2026-01-11 07:56:18] 2026-01-11 06:55:41,028 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 07:56:18] 2026-01-11 06:55:41,028 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 07:56:18] 2026-01-11 06:55:41,029 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 07:56:18] 2026-01-11 06:55:41,029 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 07:56:18] 2026-01-11 06:55:41,031 | INFO     | fitting pss+swap vs Time
[2026-01-11 07:56:18] 2026-01-11 06:55:41,031 | INFO     | sum of square deviations: 1748737904.5
[2026-01-11 07:56:18] 2026-01-11 06:55:41,032 | INFO     | sum of deviations: -2282689052.0
[2026-01-11 07:56:18] 2026-01-11 06:55:41,032 | INFO     | mean x: 1768109114.5
[2026-01-11 07:56:18] 2026-01-11 06:55:41,032 | INFO     | mean y: 2303377.3483146066
[2026-01-11 07:56:18] 2026-01-11 06:55:41,032 | INFO     | intersect: 2310278350.6274304
[2026-01-11 07:56:18] 2026-01-11 06:55:41,032 | INFO     | chi2: 1.9203060663778038
[2026-01-11 07:56:18] 2026-01-11 06:55:41,033 | INFO     | sum of square deviations: 1605470102.0
[2026-01-11 07:56:18] 2026-01-11 06:55:41,033 | INFO     | sum of deviations: 9148389173.000002
[2026-01-11 07:56:18] 2026-01-11 06:55:41,033 | INFO     | mean x: 1768108962.0
[2026-01-11 07:56:18] 2026-01-11 06:55:41,034 | INFO     | mean y: 2315266.543352601
[2026-01-11 07:56:18] 2026-01-11 06:55:41,034 | INFO     | intersect: -10072832731.849627
[2026-01-11 07:56:18] 2026-01-11 06:55:41,034 | INFO     | chi2: 1.0544886456815947
[2026-01-11 07:56:18] 2026-01-11 06:55:41,034 | INFO     | current chi2=1.0544886456815947 (change=45.08746995364992 %)
[2026-01-11 07:56:18] 2026-01-11 06:55:41,034 | INFO     | sum of square deviations: 1470248962.0
[2026-01-11 07:56:18] 2026-01-11 06:55:41,035 | INFO     | sum of deviations: 8931604993.999998
[2026-01-11 07:56:18] 2026-01-11 06:55:41,035 | INFO     | mean x: 1768108809.5
[2026-01-11 07:56:18] 2026-01-11 06:55:41,035 | INFO     | mean y: 2315021.9285714286
[2026-01-11 07:56:18] 2026-01-11 06:55:41,035 | INFO     | intersect: -10738756647.582045
[2026-01-11 07:56:18] 2026-01-11 06:55:41,035 | INFO     | chi2: 1.0551944283293926
[2026-01-11 07:56:18] 2026-01-11 06:55:41,035 | INFO     | current chi2=1.0551944283293926 (change=-0.06693127049667368 %)
[2026-01-11 07:56:18] 2026-01-11 06:55:41,035 | INFO     | right removable region: 167
[2026-01-11 07:56:18] 2026-01-11 06:55:41,035 | INFO     | sum of square deviations: 1605470102.0
[2026-01-11 07:56:18] 2026-01-11 06:55:41,036 | INFO     | sum of deviations: -13319467974.000002
[2026-01-11 07:56:18] 2026-01-11 06:55:41,036 | INFO     | mean x: 1768109267.0
[2026-01-11 07:56:18] 2026-01-11 06:55:41,036 | INFO     | mean y: 2314797.3641618495
[2026-01-11 07:56:18] 2026-01-11 06:55:41,036 | INFO     | intersect: 14671086720.928217
[2026-01-11 07:56:18] 2026-01-11 06:55:41,037 | INFO     | chi2: 0.8976449461180018
[2026-01-11 07:56:18] 2026-01-11 06:55:41,037 | INFO     | current chi2=0.8976449461180018 (change=53.25511063914965 %)
[2026-01-11 07:56:18] 2026-01-11 06:55:41,037 | INFO     | sum of square deviations: 1470248962.0
[2026-01-11 07:56:18] 2026-01-11 06:55:41,037 | INFO     | sum of deviations: -11649923014.5
[2026-01-11 07:56:18] 2026-01-11 06:55:41,038 | INFO     | mean x: 1768109419.5
[2026-01-11 07:56:18] 2026-01-11 06:55:41,038 | INFO     | mean y: 2312909.2916666665
[2026-01-11 07:56:18] 2026-01-11 06:55:41,038 | INFO     | intersect: 14012415382.254532
[2026-01-11 07:56:18] 2026-01-11 06:55:41,038 | INFO     | chi2: 0.8961341625813801
[2026-01-11 07:56:18] 2026-01-11 06:55:41,038 | INFO     | current chi2=0.8961341625813801 (change=0.1683052462062326 %)
[2026-01-11 07:56:18] 2026-01-11 06:55:41,038 | INFO     | left removable region: 20
[2026-01-11 07:56:18] 2026-01-11 06:55:41,038 | INFO     | sum of square deviations: 984941258.0
[2026-01-11 07:56:18] 2026-01-11 06:55:41,039 | INFO     | sum of deviations: 1203496511.0000005
[2026-01-11 07:56:18] 2026-01-11 06:55:41,039 | INFO     | mean x: 1768109389.0
[2026-01-11 07:56:18] 2026-01-11 06:55:41,039 | INFO     | mean y: 2323436.224489796
[2026-01-11 07:56:18] 2026-01-11 06:55:41,039 | INFO     | intersect: -2158123659.9289775
[2026-01-11 07:56:18] 2026-01-11 06:55:41,039 | INFO     | chi2: 0.0015671162238423638
[2026-01-11 07:56:18] 2026-01-11 06:55:41,039 | INFO     | current memory leak: 1.22 B/s (using 147 data points, chi2=0.00)
[2026-01-11 07:56:18] 2026-01-11 06:55:41,039 | INFO     | could have reported an average CPU frequency of 3913 MHz (10 samples)
[2026-01-11 07:56:18] 2026-01-11 06:55:41,039 | INFO     | ..............................
[2026-01-11 07:56:18] 2026-01-11 06:55:41,040 | INFO     | . Timing measurements:
[2026-01-11 07:56:18] 2026-01-11 06:55:41,040 | INFO     | . get job = 0 s
[2026-01-11 07:56:18] 2026-01-11 06:55:41,040 | INFO     | . initial setup = 1 s
[2026-01-11 07:56:18] 2026-01-11 06:55:41,040 | INFO     | . payload setup = 3 s
[2026-01-11 07:56:18] 2026-01-11 06:55:41,040 | INFO     | . stage-in = 0 s
[2026-01-11 07:56:18] 2026-01-11 06:55:41,040 | INFO     | . payload execution = 10820 s
[2026-01-11 07:56:18] 2026-01-11 06:55:41,040 | INFO     | . stage-out = 0 s
[2026-01-11 07:56:18] 2026-01-11 06:55:41,040 | INFO     | . log creation = 0 s
[2026-01-11 07:56:18] 2026-01-11 06:55:41,040 | INFO     | ..............................
[2026-01-11 07:56:18] 2026-01-11 06:55:41,357 | INFO     | 
[2026-01-11 07:56:18] 2026-01-11 06:55:41,358 | INFO     | job summary report
[2026-01-11 07:56:18] 2026-01-11 06:55:41,358 | INFO     | --------------------------------------------------
[2026-01-11 07:56:18] 2026-01-11 06:55:41,358 | INFO     | PanDA job id: 6963162422
[2026-01-11 07:56:18] 2026-01-11 06:55:41,358 | INFO     | task id: 47898826
[2026-01-11 07:56:18] 2026-01-11 06:55:41,358 | INFO     | errors: (none)
[2026-01-11 07:56:18] 2026-01-11 06:55:41,358 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 07:56:18] 2026-01-11 06:55:41,358 | INFO     | pilot state: finished 
[2026-01-11 07:56:18] 2026-01-11 06:55:41,358 | INFO     | transexitcode: 0
[2026-01-11 07:56:18] 2026-01-11 06:55:41,358 | INFO     | exeerrorcode: 0
[2026-01-11 07:56:18] 2026-01-11 06:55:41,358 | INFO     | exeerrordiag: 
[2026-01-11 07:56:18] 2026-01-11 06:55:41,358 | INFO     | exitcode: 0
[2026-01-11 07:56:18] 2026-01-11 06:55:41,358 | INFO     | exitmsg: OK
[2026-01-11 07:56:18] 2026-01-11 06:55:41,358 | INFO     | cpuconsumptiontime: 31971 s
[2026-01-11 07:56:18] 2026-01-11 06:55:41,358 | INFO     | nevents: 400
[2026-01-11 07:56:18] 2026-01-11 06:55:41,358 | INFO     | neventsw: 0
[2026-01-11 07:56:18] 2026-01-11 06:55:41,358 | INFO     | pid: 4045206
[2026-01-11 07:56:18] 2026-01-11 06:55:41,359 | INFO     | pgrp: 4045206
[2026-01-11 07:56:18] 2026-01-11 06:55:41,359 | INFO     | corecount: 3
[2026-01-11 07:56:18] 2026-01-11 06:55:41,359 | INFO     | event service: False
[2026-01-11 07:56:18] 2026-01-11 06:55:41,359 | INFO     | sizes: {0: 2283977, 3: 2284239, 11: 2284267, 10824: 2313566, 10826: 2322576, 10827: 2322632, 10832: 2322954}
[2026-01-11 07:56:18] 2026-01-11 06:55:41,359 | INFO     | --------------------------------------------------
[2026-01-11 07:56:18] 2026-01-11 06:55:41,359 | INFO     | 
[2026-01-11 07:56:18] 2026-01-11 06:55:41,359 | INFO     | executing command: ls -lF /var/lib/boinc/boinc/slots/0
[2026-01-11 07:56:18] 2026-01-11 06:55:41,373 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 07:56:18] 2026-01-11 06:55:41,373 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 07:56:18] 2026-01-11 06:55:41,373 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 07:56:18] 2026-01-11 06:55:41,373 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 07:56:18] 2026-01-11 06:55:41,373 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 07:56:18] 2026-01-11 06:55:41,373 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 07:56:18] 2026-01-11 06:55:41,373 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 07:56:18] 2026-01-11 06:55:41,373 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 07:56:18] 2026-01-11 06:55:41,374 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 07:56:18] 2026-01-11 06:55:41,374 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 07:56:18] 2026-01-11 06:55:41,374 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 07:56:18] 2026-01-11 06:55:41,374 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 07:56:18] 2026-01-11 06:55:41,374 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 07:56:18] 2026-01-11 06:55:41,374 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 07:56:18] 2026-01-11 06:55:41,374 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 07:56:18] 2026-01-11 06:55:41,374 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 07:56:18] 2026-01-11 06:55:41,374 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 07:56:18] 2026-01-11 06:55:41,374 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 07:56:18] 2026-01-11 06:55:41,374 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 07:56:18] 2026-01-11 06:55:41,374 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 07:56:18] 2026-01-11 06:55:41,374 | INFO     | job 6963162422 has completed (purged errors)
[2026-01-11 07:56:18] 2026-01-11 06:55:41,374 | INFO     | overall cleanup function is called
[2026-01-11 07:56:18] 2026-01-11 06:55:42,381 | INFO     | --- collectZombieJob: --- 10, [4045206]
[2026-01-11 07:56:18] 2026-01-11 06:55:42,381 | INFO     | zombie collector waiting for pid 4045206
[2026-01-11 07:56:18] 2026-01-11 06:55:42,381 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 07:56:18] 2026-01-11 06:55:42,381 | INFO     | collected zombie processes
[2026-01-11 07:56:18] 2026-01-11 06:55:42,381 | INFO     | will attempt to kill all subprocesses of pid=4045206
[2026-01-11 07:56:18] 2026-01-11 06:55:42,468 | INFO     | process IDs to be killed: [4045206] (in reverse order)
[2026-01-11 07:56:18] 2026-01-11 06:55:42,505 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 07:56:18] 2026-01-11 06:55:42,505 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 07:56:18] 2026-01-11 06:55:42,508 | INFO     | did not find any defunct processes belonging to 4045206
[2026-01-11 07:56:18] 2026-01-11 06:55:42,510 | INFO     | did not find any defunct processes belonging to 4045206
[2026-01-11 07:56:18] 2026-01-11 06:55:42,510 | INFO     | ready for new job
[2026-01-11 07:56:18] 2026-01-11 06:55:42,510 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 07:56:18] 2026-01-11 06:55:42,512 | INFO     | ***************************************
[2026-01-11 07:56:18] 2026-01-11 06:55:42,512 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 07:56:18] 2026-01-11 06:55:42,512 | INFO     | ***************************************
[2026-01-11 07:56:18] 2026-01-11 06:55:42,512 | INFO     | 
[2026-01-11 07:56:18] 2026-01-11 06:55:42,512 | INFO     | architecture information:
[2026-01-11 07:56:18] 2026-01-11 06:55:42,513 | INFO     | executing command: cat /etc/os-release
[2026-01-11 07:56:18] 2026-01-11 06:55:42,522 | INFO     | cat /etc/os-release:
[2026-01-11 07:56:18] NAME="CentOS Linux"
[2026-01-11 07:56:18] VERSION="7 (Core)"
[2026-01-11 07:56:18] ID="centos"
[2026-01-11 07:56:18] ID_LIKE="rhel fedora"
[2026-01-11 07:56:18] VERSION_ID="7"
[2026-01-11 07:56:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 07:56:18] ANSI_COLOR="0;31"
[2026-01-11 07:56:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 07:56:18] HOME_URL="https://www.centos.org/"
[2026-01-11 07:56:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 07:56:18] 
[2026-01-11 07:56:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 07:56:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 07:56:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 07:56:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 07:56:18] 
[2026-01-11 07:56:18] 2026-01-11 06:55:42,522 | INFO     | ***************************************
[2026-01-11 07:56:18] 2026-01-11 06:55:43,025 | INFO     | executing command: df -mP /var/lib/boinc/boinc/slots/0
[2026-01-11 07:56:18] 2026-01-11 06:55:43,038 | INFO     | sufficient remaining disk space (383019646976 B)
[2026-01-11 07:56:18] 2026-01-11 06:55:43,038 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 07:56:18] 2026-01-11 06:55:43,038 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 07:56:18] 2026-01-11 06:55:43,038 | INFO     | update_server=False
[2026-01-11 07:56:18] 2026-01-11 06:55:43,038 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 07:56:18] 2026-01-11 06:55:43,038 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:56:18] 2026-01-11 06:55:43,038 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:56:18] 2026-01-11 06:55:43,039 | INFO     | aborting loop
[2026-01-11 07:56:18] 2026-01-11 06:55:43,097 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 07:56:18] 2026-01-11 06:55:43,967 | INFO     | all data control threads have been joined
[2026-01-11 07:56:18] 2026-01-11 06:55:44,016 | INFO     | all payload control threads have been joined
[2026-01-11 07:56:18] 2026-01-11 06:55:44,041 | INFO     | [job] retrieve thread has finished
[2026-01-11 07:56:18] 2026-01-11 06:55:44,041 | INFO     | [job] job monitor thread has finished
[2026-01-11 07:56:18] 2026-01-11 06:55:44,044 | INFO     | [job] queue monitor thread has finished
[2026-01-11 07:56:18] 2026-01-11 06:55:44,077 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 07:56:18] 2026-01-11 06:55:44,082 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 07:56:18] 2026-01-11 06:55:44,412 | INFO     | all job control threads have been joined
[2026-01-11 07:56:18] 2026-01-11 06:55:44,493 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 07:56:18] 2026-01-11 06:55:44,966 | INFO     | [payload] failed_post thread has finished
[2026-01-11 07:56:18] 2026-01-11 06:55:44,973 | INFO     | [data] control thread has finished
[2026-01-11 07:56:18] 2026-01-11 06:55:45,022 | INFO     | [payload] control thread has finished
[2026-01-11 07:56:18] 2026-01-11 06:55:45,102 | INFO     | [data] copytool_out thread has finished
[2026-01-11 07:56:18] 2026-01-11 06:55:45,248 | INFO     | [data] copytool_in thread has finished
[2026-01-11 07:56:18] 2026-01-11 06:55:45,263 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 07:56:18] 2026-01-11 06:55:45,373 | INFO     | [job] validate thread has finished
[2026-01-11 07:56:18] 2026-01-11 06:55:45,418 | INFO     | [job] control thread has finished
[2026-01-11 07:56:18] 2026-01-11 06:55:45,496 | INFO     | [payload] validate_post thread has finished
[2026-01-11 07:56:18] 2026-01-11 06:55:46,494 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 07:56:18] 2026-01-11 06:55:50,500 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 07:56:18] 2026-01-11 06:56:12,764 | INFO     | [monitor] cgroup control has ended
[2026-01-11 07:56:18] 2026-01-11 06:56:13,204 | INFO     | PID=4038669 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 07:56:18] 2026-01-11 06:56:13,206 | INFO     | .. there are 4 such processes running
[2026-01-11 07:56:18] 2026-01-11 06:56:13,207 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 07:56:18] 2026-01-11 06:56:13,207 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 07:56:18] 2026-01-11 06:56:13,207 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 07:56:18] 2026-01-11 06:56:13,767 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140209803425600)>', '<ExcThread(monitor, started 140208804722432)>']
[2026-01-11 07:56:18] 2026-01-11 06:56:14,212 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 07:56:18] 2026-01-11 06:56:14,212 | INFO     | [monitor] control thread has ended
[2026-01-11 07:56:18] 2026-01-11 06:56:18,791 | INFO     | all workflow threads have been joined
[2026-01-11 07:56:18] 2026-01-11 06:56:18,791 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 07:56:18] 2026-01-11 06:56:18,791 | INFO     | traces error code: 0
[2026-01-11 07:56:18] 2026-01-11 06:56:18,792 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 07:56:18] 2026-01-11 06:56:18,865 [wrapper] ==== pilot stdout END ====
[2026-01-11 07:56:18] 2026-01-11 06:56:18,866 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 07:56:18] 2026-01-11 06:56:18,868 [wrapper] pilotpid: 4038669
[2026-01-11 07:56:18] 2026-01-11 06:56:18,870 [wrapper] Pilot exit status: 0
[2026-01-11 07:56:18] 2026-01-11 06:56:18,876 [wrapper] pandaids: 6963162422
[2026-01-11 07:56:18] 2026-01-11 06:56:18,900 [wrapper] cleanup supervisor_pilot   56073 4038670
[2026-01-11 07:56:18] 2026-01-11 06:56:18,902 [wrapper] Test setup, not cleaning
[2026-01-11 07:56:18] 2026-01-11 06:56:18,904 [wrapper] apfmon messages muted
[2026-01-11 07:56:18] 2026-01-11 06:56:18,905 [wrapper] ==== wrapper stdout END ====
[2026-01-11 07:56:18] 2026-01-11 06:56:18,907 [wrapper] ==== wrapper stderr END ====
[2026-01-11 07:56:18]  *** Error codes and diagnostics ***
[2026-01-11 07:56:18]     "exeErrorCode": 0,
[2026-01-11 07:56:18]     "exeErrorDiag": "",
[2026-01-11 07:56:18]     "pilotErrorCode": 0,
[2026-01-11 07:56:18]     "pilotErrorDiag": "",
[2026-01-11 07:56:18]  *** Listing of results directory ***
[2026-01-11 07:56:18] insgesamt 442356
[2026-01-11 07:56:18] -rw-r--r-- 1 boinc boinc    579449  9. Jan 01:57 pilot3.tar.gz
[2026-01-11 07:56:18] -rwx------ 1 boinc boinc     36322  9. Jan 01:58 runpilot2-wrapper.sh
[2026-01-11 07:56:18] -rw-r--r-- 1 boinc boinc      5112  9. Jan 02:01 queuedata.json
[2026-01-11 07:56:18] -rw-r--r-- 1 boinc boinc       100 11. Jan 04:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 07:56:18] -rwxr-xr-x 1 boinc boinc      7986 11. Jan 04:54 run_atlas
[2026-01-11 07:56:18] -rw-r--r-- 1 boinc boinc       105 11. Jan 04:54 job.xml
[2026-01-11 07:56:18] -rw-r--r-- 1 boinc boinc      6997 11. Jan 04:54 init_data.xml
[2026-01-11 07:56:18] -rw-r--r-- 2 boinc boinc 225925878 11. Jan 04:54 EVNT.47898824._001297.pool.root.1
[2026-01-11 07:56:18] drwxrwx--x 2 boinc boinc      4096 11. Jan 04:54 shared
[2026-01-11 07:56:18] -rw-r--r-- 2 boinc boinc    592402 11. Jan 04:54 input.tar.gz
[2026-01-11 07:56:18] -rw-r--r-- 2 boinc boinc     15847 11. Jan 04:54 start_atlas.sh
[2026-01-11 07:56:18] -rw-r--r-- 1 boinc boinc         0 11. Jan 04:54 boinc_lockfile
[2026-01-11 07:56:18] -rw-r--r-- 1 boinc boinc      2520 11. Jan 04:54 pandaJob.out
[2026-01-11 07:56:18] -rw------- 1 boinc boinc        52 11. Jan 04:54 setup.sh.local
[2026-01-11 07:56:18] -rw------- 1 boinc boinc    989548 11. Jan 04:54 agis_schedconf.cvmfs.json
[2026-01-11 07:56:18] drwx------ 5 boinc boinc      4096 11. Jan 04:54 pilot3
[2026-01-11 07:56:18] -rw------- 1 boinc boinc 219268644 11. Jan 07:55 HITS.47898826._034043.pool.root.1
[2026-01-11 07:56:18] -rw-r--r-- 1 boinc boinc       531 11. Jan 07:55 boinc_task_state.xml
[2026-01-11 07:56:18] -rw------- 1 boinc boinc        95 11. Jan 07:55 pilot_heartbeat.json
[2026-01-11 07:56:18] -rw------- 1 boinc boinc      1015 11. Jan 07:55 memory_monitor_summary.json
[2026-01-11 07:56:18] -rw------- 1 boinc boinc   1516240 11. Jan 07:55 agis_ddmendpoints.agis.ALL.json
[2026-01-11 07:56:18] -rw------- 1 boinc boinc    348298 11. Jan 07:55 log.47898826._034043.job.log.tgz.1
[2026-01-11 07:56:18] -rw------- 1 boinc boinc      7728 11. Jan 07:55 heartbeat.json
[2026-01-11 07:56:18] -rw-r--r-- 1 boinc boinc        28 11. Jan 07:56 wrapper_checkpoint.txt
[2026-01-11 07:56:18] -rw-r--r-- 1 boinc boinc      8192 11. Jan 07:56 boinc_mmap_file
[2026-01-11 07:56:18] -rw------- 1 boinc boinc      4830 11. Jan 07:56 pilotlog.txt
[2026-01-11 07:56:18] -rw------- 1 boinc boinc   1581936 11. Jan 07:56 log.47898826._034043.job.log.1
[2026-01-11 07:56:18] -rw------- 1 boinc boinc       357 11. Jan 07:56 output.list
[2026-01-11 07:56:18] -rw-r--r-- 1 boinc boinc       620 11. Jan 07:56 runtime_log
[2026-01-11 07:56:18] -rw------- 1 boinc boinc   1945600 11. Jan 07:56 result.tar.gz
[2026-01-11 07:56:18] -rw-r--r-- 1 boinc boinc      9378 11. Jan 07:56 runtime_log.err
[2026-01-11 07:56:18] -rw------- 1 boinc boinc       645 11. Jan 07:56 mmaMDmx0Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9ggKDms6DZXo.diag
[2026-01-11 07:56:18] -rw-r--r-- 1 boinc boinc     20808 11. Jan 07:56 stderr.txt
[2026-01-11 07:56:18] HITS file was successfully produced:
[2026-01-11 07:56:18] -rw------- 1 boinc boinc 219268644 11. Jan 07:55 shared/HITS.pool.root.1
[2026-01-11 07:56:18]  *** Contents of shared directory: ***
[2026-01-11 07:56:18] insgesamt 437268
[2026-01-11 07:56:18] -rw-r--r-- 2 boinc boinc 225925878 11. Jan 04:54 ATLAS.root_0
[2026-01-11 07:56:18] -rw-r--r-- 2 boinc boinc    592402 11. Jan 04:54 input.tar.gz
[2026-01-11 07:56:18] -rw-r--r-- 2 boinc boinc     15847 11. Jan 04:54 start_atlas.sh
[2026-01-11 07:56:18] -rw------- 1 boinc boinc 219268644 11. Jan 07:55 HITS.pool.root.1
[2026-01-11 07:56:18] -rw------- 1 boinc boinc   1945600 11. Jan 07:56 result.tar.gz
07:56:20 (4034892): run_atlas exited; CPU time 32098.660918
07:56:20 (4034892): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN