Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:18:02 (897979): wrapper (7.7.26015): starting
18:18:02 (897979): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 18:18:02] Arguments: --nthreads 4
[2026-01-09 18:18:02] Threads: 4
[2026-01-09 18:18:02] Checking for CVMFS
[2026-01-09 18:18:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:18:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:18:02] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:18:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:18:02] 2.9.2.0 157024 2551 90008 154951 2 56 21877798 36864001 0 130560 0 1907635 99.990 96235 5607 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-09 18:18:02] CVMFS is ok
[2026-01-09 18:18:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:18:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:18:02] Further information can be found at the LHC@home message board.
[2026-01-09 18:18:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:18:02] Checking for apptainer binary...
[2026-01-09 18:18:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:18:02] Running /usr/bin/apptainer --version
[2026-01-09 18:18:02] apptainer version 1.4.1-1.1
[2026-01-09 18:18:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:18:02] atlasA139
[2026-01-09 18:18:02] apptainer works
[2026-01-09 18:18:02] Set ATHENA_PROC_NUMBER=4
[2026-01-09 18:18:02] Set ATHENA_CORE_NUMBER=4
[2026-01-09 18:18:02] Starting ATLAS job with PandaID=6963186527
[2026-01-09 18:18:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:57:31]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:57:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 19:57:31]  replicas=None
[2026-01-09 19:57:31]  scope=mc23_13p6TeV
[2026-01-09 19:57:31]  status=None
[2026-01-09 19:57:31]  status_code=0
[2026-01-09 19:57:31]  storage_token=
[2026-01-09 19:57:31]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6963186527/log.47898826._036503.job.log.tgz.1
[2026-01-09 19:57:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/e8/log.47898826._036503.job.log.tgz.1
[2026-01-09 19:57:31]  workdir=None
[2026-01-09 19:57:31] ]
[2026-01-09 19:57:31] 2026-01-09 18:56:50,727 | INFO     | transferring file log.47898826._036503.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6963186527/log.47898826._036503.job.log.tgz.1 to /local/data/boinc/
[2026-01-09 19:57:31] 2026-01-09 18:56:50,727 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6963186527/log.47898826._036503.job.log.tgz.1 /local/data/boinc/slots/0/log.47898826._0365
[2026-01-09 19:57:31] 2026-01-09 18:56:50,746 | INFO     | adding to output.list: log.47898826._036503.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/e8/log.47898826._036503.job.log.tg
[2026-01-09 19:57:31] 2026-01-09 18:56:50,746 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 19:57:31] 2026-01-09 18:56:50,746 | INFO     | summary of transferred files:
[2026-01-09 19:57:31] 2026-01-09 18:56:50,747 | INFO     |  -- lfn=log.47898826._036503.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 19:57:31] 2026-01-09 18:56:50,747 | INFO     | stage-out finished correctly
[2026-01-09 19:57:31] 2026-01-09 18:56:52,011 | INFO     | time since job start (5922s) is within the limit (349056.0s)
[2026-01-09 19:57:31] 2026-01-09 18:56:52,749 | INFO     | monitor loop #455: job 0:6963186527 is in state 'finished'
[2026-01-09 19:57:31] 2026-01-09 18:56:52,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:57:31] 2026-01-09 18:56:53,772 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 19:57:31] 2026-01-09 18:56:54,017 | INFO     | time since job start (5924s) is within the limit (349056.0s)
[2026-01-09 19:57:31] 2026-01-09 18:56:55,253 | INFO     | monitor loop #456: job 0:6963186527 is in state 'finished'
[2026-01-09 19:57:31] 2026-01-09 18:56:55,254 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:57:31] 2026-01-09 18:56:56,023 | INFO     | time since job start (5926s) is within the limit (349056.0s)
[2026-01-09 19:57:31] 2026-01-09 18:56:56,462 | INFO     | job 6963186527 has state=finished
[2026-01-09 19:57:31] 2026-01-09 18:56:56,462 | INFO     | preparing for final server update for job 6963186527 in state='finished'
[2026-01-09 19:57:31] 2026-01-09 18:56:56,462 | INFO     | this job has now completed (state=finished)
[2026-01-09 19:57:31] 2026-01-09 18:56:56,463 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 19:57:31] 2026-01-09 18:56:56,463 | INFO     | log transfer has been attempted: DONE
[2026-01-09 19:57:31] 2026-01-09 18:56:56,463 | INFO     | job 6963186527 has finished - writing final server update
[2026-01-09 19:57:31] 2026-01-09 18:56:56,463 | INFO     | total number of processed events: 400 (read)
[2026-01-09 19:57:31] 2026-01-09 18:56:56,464 | INFO     | executing command: lscpu
[2026-01-09 19:57:31] 2026-01-09 18:56:56,484 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 19:57:31] 2026-01-09 18:56:57,107 | INFO     | PID=901776 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 19:57:31] 2026-01-09 18:56:57,757 | INFO     | monitor loop #457: job 0:6963186527 is in state 'finished'
[2026-01-09 19:57:31] 2026-01-09 18:56:57,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:57:31] 2026-01-09 18:56:58,108 | INFO     | time since job start (5928s) is within the limit (349056.0s)
[2026-01-09 19:57:31] 2026-01-09 18:56:59,713 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 19:57:31] 2026-01-09 18:56:59,715 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3216.863
[2026-01-09 19:57:31] 2026-01-09 18:56:59,716 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6963186527/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 19:57:31] 2026-01-09 18:56:59,717 | INFO     | extracted standard info from prmon json
[2026-01-09 19:57:31] 2026-01-09 18:56:59,717 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 19:57:31] 2026-01-09 18:56:59,717 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 19:57:31] 2026-01-09 18:56:59,717 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 19:57:31] 2026-01-09 18:56:59,717 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 19:57:31] 2026-01-09 18:56:59,718 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:57:31] 2026-01-09 18:56:59,718 | INFO     | sum of square deviations: 226022842.5
[2026-01-09 19:57:31] 2026-01-09 18:56:59,718 | INFO     | sum of deviations: -20451233868.99999
[2026-01-09 19:57:31] 2026-01-09 18:56:59,718 | INFO     | mean x: 1767982132.5
[2026-01-09 19:57:31] 2026-01-09 18:56:59,718 | INFO     | mean y: 2598116.0444444446
[2026-01-09 19:57:31] 2026-01-09 18:56:59,718 | INFO     | intersect: 159974995896.90512
[2026-01-09 19:57:31] 2026-01-09 18:56:59,718 | INFO     | chi2: 0.11880584485603475
[2026-01-09 19:57:31] 2026-01-09 18:56:59,718 | INFO     | current memory leak: -90.48 B/s (using 90 data points, chi2=0.12)
[2026-01-09 19:57:31] 2026-01-09 18:56:59,718 | INFO     | could have reported an average CPU frequency of 3599 MHz (7 samples)
[2026-01-09 19:57:31] 2026-01-09 18:56:59,718 | INFO     | ..............................
[2026-01-09 19:57:31] 2026-01-09 18:56:59,718 | INFO     | . Timing measurements:
[2026-01-09 19:57:31] 2026-01-09 18:56:59,718 | INFO     | . get job = 0 s
[2026-01-09 19:57:31] 2026-01-09 18:56:59,718 | INFO     | . initial setup = 1 s
[2026-01-09 19:57:31] 2026-01-09 18:56:59,718 | INFO     | . payload setup = 4 s
[2026-01-09 19:57:31] 2026-01-09 18:56:59,719 | INFO     | . stage-in = 0 s
[2026-01-09 19:57:31] 2026-01-09 18:56:59,719 | INFO     | . payload execution = 5897 s
[2026-01-09 19:57:31] 2026-01-09 18:56:59,719 | INFO     | . stage-out = 0 s
[2026-01-09 19:57:31] 2026-01-09 18:56:59,719 | INFO     | . log creation = 0 s
[2026-01-09 19:57:31] 2026-01-09 18:56:59,719 | INFO     | ..............................
[2026-01-09 19:57:31] 2026-01-09 18:56:59,883 | INFO     | 
[2026-01-09 19:57:31] 2026-01-09 18:56:59,883 | INFO     | job summary report
[2026-01-09 19:57:31] 2026-01-09 18:56:59,883 | INFO     | --------------------------------------------------
[2026-01-09 19:57:31] 2026-01-09 18:56:59,883 | INFO     | PanDA job id: 6963186527
[2026-01-09 19:57:31] 2026-01-09 18:56:59,883 | INFO     | task id: 47898826
[2026-01-09 19:57:31] 2026-01-09 18:56:59,883 | INFO     | errors: (none)
[2026-01-09 19:57:31] 2026-01-09 18:56:59,883 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:57:31] 2026-01-09 18:56:59,883 | INFO     | pilot state: finished 
[2026-01-09 19:57:31] 2026-01-09 18:56:59,883 | INFO     | transexitcode: 0
[2026-01-09 19:57:31] 2026-01-09 18:56:59,883 | INFO     | exeerrorcode: 0
[2026-01-09 19:57:31] 2026-01-09 18:56:59,883 | INFO     | exeerrordiag: 
[2026-01-09 19:57:31] 2026-01-09 18:56:59,883 | INFO     | exitcode: 0
[2026-01-09 19:57:31] 2026-01-09 18:56:59,884 | INFO     | exitmsg: OK
[2026-01-09 19:57:31] 2026-01-09 18:56:59,884 | INFO     | cpuconsumptiontime: 22644 s
[2026-01-09 19:57:31] 2026-01-09 18:56:59,884 | INFO     | nevents: 400
[2026-01-09 19:57:31] 2026-01-09 18:56:59,884 | INFO     | neventsw: 0
[2026-01-09 19:57:31] 2026-01-09 18:56:59,884 | INFO     | pid: 908371
[2026-01-09 19:57:31] 2026-01-09 18:56:59,884 | INFO     | pgrp: 908371
[2026-01-09 19:57:31] 2026-01-09 18:56:59,884 | INFO     | corecount: 4
[2026-01-09 19:57:31] 2026-01-09 18:56:59,884 | INFO     | event service: False
[2026-01-09 19:57:31] 2026-01-09 18:56:59,884 | INFO     | sizes: {0: 2283973, 4: 2284235, 11: 2284263, 5905: 2311124, 5906: 2320128, 5910: 2320184, 5915: 2320506}
[2026-01-09 19:57:31] 2026-01-09 18:56:59,884 | INFO     | --------------------------------------------------
[2026-01-09 19:57:31] 2026-01-09 18:56:59,884 | INFO     | 
[2026-01-09 19:57:31] 2026-01-09 18:56:59,884 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-09 19:57:31] 2026-01-09 18:56:59,906 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:57:31] 2026-01-09 18:56:59,906 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:57:31] 2026-01-09 18:56:59,906 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:57:31] 2026-01-09 18:56:59,906 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:57:31] 2026-01-09 18:56:59,906 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:57:31] 2026-01-09 18:56:59,906 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:57:31] 2026-01-09 18:56:59,906 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:57:31] 2026-01-09 18:56:59,906 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:57:31] 2026-01-09 18:56:59,906 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:57:31] 2026-01-09 18:56:59,906 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:57:31] 2026-01-09 18:56:59,906 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:57:31] 2026-01-09 18:56:59,906 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:57:31] 2026-01-09 18:56:59,906 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:57:31] 2026-01-09 18:56:59,906 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:57:31] 2026-01-09 18:56:59,906 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:57:31] 2026-01-09 18:56:59,906 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:57:31] 2026-01-09 18:56:59,906 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:57:31] 2026-01-09 18:56:59,906 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:57:31] 2026-01-09 18:56:59,906 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:57:31] 2026-01-09 18:56:59,906 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:57:31] 2026-01-09 18:56:59,907 | INFO     | job 6963186527 has completed (purged errors)
[2026-01-09 19:57:31] 2026-01-09 18:56:59,907 | INFO     | overall cleanup function is called
[2026-01-09 19:57:31] 2026-01-09 18:57:00,913 | INFO     | --- collectZombieJob: --- 10, [908371]
[2026-01-09 19:57:31] 2026-01-09 18:57:00,913 | INFO     | zombie collector waiting for pid 908371
[2026-01-09 19:57:31] 2026-01-09 18:57:00,914 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:57:31] 2026-01-09 18:57:00,914 | INFO     | collected zombie processes
[2026-01-09 19:57:31] 2026-01-09 18:57:00,914 | INFO     | will attempt to kill all subprocesses of pid=908371
[2026-01-09 19:57:31] 2026-01-09 18:57:00,959 | INFO     | process IDs to be killed: [908371] (in reverse order)
[2026-01-09 19:57:31] 2026-01-09 18:57:00,991 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:57:31] 2026-01-09 18:57:00,991 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:57:31] 2026-01-09 18:57:00,993 | INFO     | did not find any defunct processes belonging to 908371
[2026-01-09 19:57:31] 2026-01-09 18:57:00,994 | INFO     | did not find any defunct processes belonging to 908371
[2026-01-09 19:57:31] 2026-01-09 18:57:00,994 | INFO     | ready for new job
[2026-01-09 19:57:31] 2026-01-09 18:57:00,994 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:57:31] 2026-01-09 18:57:00,995 | INFO     | ***************************************
[2026-01-09 19:57:31] 2026-01-09 18:57:00,995 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:57:31] 2026-01-09 18:57:00,995 | INFO     | ***************************************
[2026-01-09 19:57:31] 2026-01-09 18:57:00,995 | INFO     | 
[2026-01-09 19:57:31] 2026-01-09 18:57:00,996 | INFO     | architecture information:
[2026-01-09 19:57:31] 2026-01-09 18:57:00,996 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:57:31] 2026-01-09 18:57:01,009 | INFO     | cat /etc/os-release:
[2026-01-09 19:57:31] NAME="CentOS Linux"
[2026-01-09 19:57:31] VERSION="7 (Core)"
[2026-01-09 19:57:31] ID="centos"
[2026-01-09 19:57:31] ID_LIKE="rhel fedora"
[2026-01-09 19:57:31] VERSION_ID="7"
[2026-01-09 19:57:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:57:31] ANSI_COLOR="0;31"
[2026-01-09 19:57:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:57:31] HOME_URL="https://www.centos.org/"
[2026-01-09 19:57:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:57:31] 
[2026-01-09 19:57:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:57:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:57:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:57:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:57:31] 
[2026-01-09 19:57:31] 2026-01-09 18:57:01,009 | INFO     | ***************************************
[2026-01-09 19:57:31] 2026-01-09 18:57:01,512 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-09 19:57:31] 2026-01-09 18:57:01,531 | INFO     | sufficient remaining disk space (337595334656 B)
[2026-01-09 19:57:31] 2026-01-09 18:57:01,531 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:57:31] 2026-01-09 18:57:01,531 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:57:31] 2026-01-09 18:57:01,531 | INFO     | update_server=False
[2026-01-09 19:57:31] 2026-01-09 18:57:01,531 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:57:31] 2026-01-09 18:57:01,532 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:57:31] 2026-01-09 18:57:01,532 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:57:31] 2026-01-09 18:57:01,532 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:57:31] 2026-01-09 18:57:01,532 | INFO     | aborting loop
[2026-01-09 19:57:31] 2026-01-09 18:57:01,561 | INFO     | all data control threads have been joined
[2026-01-09 19:57:31] 2026-01-09 18:57:01,848 | INFO     | all payload control threads have been joined
[2026-01-09 19:57:31] 2026-01-09 18:57:02,259 | INFO     | all job control threads have been joined
[2026-01-09 19:57:31] 2026-01-09 18:57:02,537 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:57:31] 2026-01-09 18:57:02,537 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:57:31] 2026-01-09 18:57:02,537 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:57:31] 2026-01-09 18:57:02,567 | INFO     | [data] control thread has finished
[2026-01-09 19:57:31] 2026-01-09 18:57:02,567 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:57:31] 2026-01-09 18:57:02,705 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:57:31] 2026-01-09 18:57:02,854 | INFO     | [payload] control thread has finished
[2026-01-09 19:57:31] 2026-01-09 18:57:02,961 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:57:31] 2026-01-09 18:57:03,251 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:57:31] 2026-01-09 18:57:03,264 | INFO     | [job] control thread has finished
[2026-01-09 19:57:31] 2026-01-09 18:57:03,538 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:57:31] 2026-01-09 18:57:03,887 | INFO     | [job] validate thread has finished
[2026-01-09 19:57:31] 2026-01-09 18:57:03,914 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:57:31] 2026-01-09 18:57:04,035 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:57:31] 2026-01-09 18:57:04,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:57:31] 2026-01-09 18:57:08,331 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:57:31] 2026-01-09 18:57:12,509 | INFO     | job.realtimelogging is not enabled
[2026-01-09 19:57:31] 2026-01-09 18:57:13,515 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:57:31] 2026-01-09 18:57:17,247 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:57:31] 2026-01-09 18:57:17,284 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140686920632128)>', '<ExcThread(monitor, started 140686082963200)>']
[2026-01-09 19:57:31] 2026-01-09 18:57:22,310 | INFO     | all workflow threads have been joined
[2026-01-09 19:57:31] 2026-01-09 18:57:22,310 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:57:31] 2026-01-09 18:57:22,310 | INFO     | traces error code: 0
[2026-01-09 19:57:31] 2026-01-09 18:57:22,310 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:57:31] 2026-01-09 18:57:31,250 | INFO     | PID=901776 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 19:57:31] 2026-01-09 18:57:31,250 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:57:31] 2026-01-09 18:57:31,250 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:57:31] 2026-01-09 18:57:31,250 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:57:31] 2026-01-09 18:57:31,250 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:57:31] 2026-01-09 18:57:31,250 | INFO     | [monitor] control thread has ended
[2026-01-09 19:57:31] 2026-01-09 18:57:31,316 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:57:31] 2026-01-09 18:57:31,320 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:57:31] 2026-01-09 18:57:31,324 [wrapper] pilotpid: 901776
[2026-01-09 19:57:31] 2026-01-09 18:57:31,328 [wrapper] Pilot exit status: 0
[2026-01-09 19:57:31] 2026-01-09 18:57:31,339 [wrapper] pandaids: 6963186527
[2026-01-09 19:57:31] 2026-01-09 18:57:31,362 [wrapper] cleanup supervisor_pilot  920542 901777
[2026-01-09 19:57:31] 2026-01-09 18:57:31,365 [wrapper] Test setup, not cleaning
[2026-01-09 19:57:31] 2026-01-09 18:57:31,369 [wrapper] apfmon messages muted
[2026-01-09 19:57:31] 2026-01-09 18:57:31,373 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:57:31] 2026-01-09 18:57:31,377 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:57:31]  *** Error codes and diagnostics ***
[2026-01-09 19:57:31]     "exeErrorCode": 0,
[2026-01-09 19:57:31]     "exeErrorDiag": "",
[2026-01-09 19:57:31]     "pilotErrorCode": 0,
[2026-01-09 19:57:31]     "pilotErrorDiag": "",
[2026-01-09 19:57:31]  *** Listing of results directory ***
[2026-01-09 19:57:31] total 446268
[2026-01-09 19:57:31] -rw-r--r-- 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-09 19:57:31] -rwx------ 1 boinc boinc     36322 Jan  9 01:58 runpilot2-wrapper.sh
[2026-01-09 19:57:31] -rw-r--r-- 1 boinc boinc      5112 Jan  9 02:01 queuedata.json
[2026-01-09 19:57:31] -rw-r--r-- 1 boinc boinc       100 Jan  9 18:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:57:31] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 18:18 run_atlas
[2026-01-09 19:57:31] -rw-r--r-- 1 boinc boinc       105 Jan  9 18:18 job.xml
[2026-01-09 19:57:31] -rw-r--r-- 2 boinc boinc 225091262 Jan  9 18:18 EVNT.47898824._001399.pool.root.1
[2026-01-09 19:57:31] -rw-r--r-- 2 boinc boinc    592400 Jan  9 18:18 input.tar.gz
[2026-01-09 19:57:31] -rw-r--r-- 2 boinc boinc     15847 Jan  9 18:18 start_atlas.sh
[2026-01-09 19:57:31] drwxrwx--x 2 boinc boinc      4096 Jan  9 18:18 shared
[2026-01-09 19:57:31] -rw-r--r-- 1 boinc boinc         0 Jan  9 18:18 boinc_setup_complete
[2026-01-09 19:57:31] -rw-r--r-- 1 boinc boinc      6372 Jan  9 18:18 init_data.xml
[2026-01-09 19:57:31] -rw-r--r-- 1 boinc boinc         0 Jan  9 18:18 boinc_lockfile
[2026-01-09 19:57:31] -rw-r--r-- 1 boinc boinc      2519 Jan  9 18:18 pandaJob.out
[2026-01-09 19:57:31] -rw------- 1 boinc boinc    989356 Jan  9 18:18 agis_schedconf.cvmfs.json
[2026-01-09 19:57:31] -rw------- 1 boinc boinc   1516240 Jan  9 18:18 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:57:31] drwx------ 5 boinc boinc      4096 Jan  9 18:18 pilot3
[2026-01-09 19:57:31] -rw------- 1 boinc boinc 225705666 Jan  9 19:56 HITS.47898826._036503.pool.root.1
[2026-01-09 19:57:31] -rw-r--r-- 1 boinc boinc       529 Jan  9 19:56 boinc_task_state.xml
[2026-01-09 19:57:31] -rw------- 1 boinc boinc        95 Jan  9 19:56 pilot_heartbeat.json
[2026-01-09 19:57:31] -rw------- 1 boinc boinc      1017 Jan  9 19:56 memory_monitor_summary.json
[2026-01-09 19:57:31] -rw------- 1 boinc boinc    274835 Jan  9 19:56 log.47898826._036503.job.log.tgz.1
[2026-01-09 19:57:31] -rw------- 1 boinc boinc      7767 Jan  9 19:56 heartbeat.json
[2026-01-09 19:57:31] -rw-r--r-- 1 boinc boinc        27 Jan  9 19:57 wrapper_checkpoint.txt
[2026-01-09 19:57:31] -rw-r--r-- 1 boinc boinc      8192 Jan  9 19:57 boinc_mmap_file
[2026-01-09 19:57:31] -rw------- 1 boinc boinc       746 Jan  9 19:57 pilotlog.txt
[2026-01-09 19:57:31] -rw------- 1 boinc boinc    859529 Jan  9 19:57 log.47898826._036503.job.log.1
[2026-01-09 19:57:31] -rw------- 1 boinc boinc       357 Jan  9 19:57 output.list
[2026-01-09 19:57:31] -rw-r--r-- 1 boinc boinc       620 Jan  9 19:57 runtime_log
[2026-01-09 19:57:31] -rw------- 1 boinc boinc   1157120 Jan  9 19:57 result.tar.gz
[2026-01-09 19:57:31] -rw-r--r-- 1 boinc boinc      8912 Jan  9 19:57 runtime_log.err
[2026-01-09 19:57:31] -rw------- 1 boinc boinc       662 Jan  9 19:57 PfHNDmN0Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLulKDmsITlAn.diag
[2026-01-09 19:57:31] -rw-r--r-- 1 boinc boinc     22001 Jan  9 19:57 stderr.txt
[2026-01-09 19:57:31] HITS file was successfully produced:
[2026-01-09 19:57:31] -rw------- 1 boinc boinc 225705666 Jan  9 19:56 shared/HITS.pool.root.1
[2026-01-09 19:57:31]  *** Contents of shared directory: ***
[2026-01-09 19:57:31] total 441968
[2026-01-09 19:57:31] -rw-r--r-- 2 boinc boinc 225091262 Jan  9 18:18 ATLAS.root_0
[2026-01-09 19:57:31] -rw-r--r-- 2 boinc boinc    592400 Jan  9 18:18 input.tar.gz
[2026-01-09 19:57:31] -rw-r--r-- 2 boinc boinc     15847 Jan  9 18:18 start_atlas.sh
[2026-01-09 19:57:31] -rw------- 1 boinc boinc 225705666 Jan  9 19:56 HITS.pool.root.1
[2026-01-09 19:57:31] -rw------- 1 boinc boinc   1157120 Jan  9 19:57 result.tar.gz
19:57:33 (897979): run_atlas exited; CPU time 22664.302077
19:57:33 (897979): called boinc_finish(0)

</stderr_txt>
]]>

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