Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:46:12 (2525): wrapper (7.7.26015): starting
01:46:12 (2525): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 01:46:12] Arguments: --nthreads 12
[2026-01-09 01:46:12] Threads: 12
[2026-01-09 01:46:12] Checking for CVMFS
[2026-01-09 01:46:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 01:46:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 01:46:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 01:46:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 01:46:13] 2.11.2.0 2947 350653 96544 154934 2 81 17574189 20275200 1 130560 1 149056195 99.954 20573737 14771 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 01:46:13] CVMFS is ok
[2026-01-09 01:46:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 01:46:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 01:46:13] Further information can be found at the LHC@home message board.
[2026-01-09 01:46:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 01:46:13] Checking for apptainer binary...
[2026-01-09 01:46:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 01:46:13] Running /usr/bin/apptainer --version
[2026-01-09 01:46:13] apptainer version 1.3.2-1.el7
[2026-01-09 01:46:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 01:46:14] c-205-18.aglt2.org
[2026-01-09 01:46:14] apptainer works
[2026-01-09 01:46:14] Set ATHENA_PROC_NUMBER=12
[2026-01-09 01:46:14] Set ATHENA_CORE_NUMBER=12
[2026-01-09 01:46:14] Starting ATLAS job with PandaID=6963155889
[2026-01-09 01:46:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 03:28:46]  *** The last 200 lines of the pilot log: ***
[2026-01-09 03:28:46] 2026-01-09 08:28:01,707 | INFO     | time since job start (6091s) is within the limit (349056.0s)
[2026-01-09 03:28:46] 2026-01-09 08:28:01,707 | INFO     | 6094s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-09 03:28:46] 2026-01-09 08:28:02,829 | INFO     | PID=6249 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 03:28:46] 2026-01-09 08:28:03,520 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 03:28:46] 2026-01-09 08:28:03,524 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1762.3333333333333
[2026-01-09 03:28:46] 2026-01-09 08:28:03,526 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963155889/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 03:28:46] 2026-01-09 08:28:03,527 | INFO     | extracted standard info from prmon json
[2026-01-09 03:28:46] 2026-01-09 08:28:03,527 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 03:28:46] 2026-01-09 08:28:03,528 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 03:28:46] 2026-01-09 08:28:03,528 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 03:28:46] 2026-01-09 08:28:03,528 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 03:28:46] 2026-01-09 08:28:03,530 | INFO     | fitting pss+swap vs Time
[2026-01-09 03:28:46] 2026-01-09 08:28:03,530 | INFO     | sum of square deviations: 310052325.0
[2026-01-09 03:28:46] 2026-01-09 08:28:03,531 | INFO     | sum of deviations: 3384478036.499997
[2026-01-09 03:28:46] 2026-01-09 08:28:03,531 | INFO     | mean x: 1767944238.5
[2026-01-09 03:28:46] 2026-01-09 08:28:03,531 | INFO     | mean y: 2626573.85
[2026-01-09 03:28:46] 2026-01-09 08:28:03,531 | INFO     | intersect: -19295949706.653503
[2026-01-09 03:28:46] 2026-01-09 08:28:03,531 | INFO     | chi2: 2.29151639307885
[2026-01-09 03:28:46] 2026-01-09 08:28:03,532 | INFO     | sum of square deviations: 265828240.0
[2026-01-09 03:28:46] 2026-01-09 08:28:03,532 | INFO     | sum of deviations: 10116472226.999998
[2026-01-09 03:28:46] 2026-01-09 08:28:03,532 | INFO     | mean x: 1767944086.0
[2026-01-09 03:28:46] 2026-01-09 08:28:03,532 | INFO     | mean y: 2648801.0736842104
[2026-01-09 03:28:46] 2026-01-09 08:28:03,533 | INFO     | intersect: -67278981039.71334
[2026-01-09 03:28:46] 2026-01-09 08:28:03,533 | INFO     | chi2: 1.518324657312009
[2026-01-09 03:28:46] 2026-01-09 08:28:03,533 | INFO     | current chi2=1.518324657312009 (change=33.74148830451922 %)
[2026-01-09 03:28:46] 2026-01-09 08:28:03,533 | INFO     | sum of square deviations: 226022842.5
[2026-01-09 03:28:46] 2026-01-09 08:28:03,533 | INFO     | sum of deviations: 9635287757.000002
[2026-01-09 03:28:46] 2026-01-09 08:28:03,534 | INFO     | mean x: 1767943933.5
[2026-01-09 03:28:46] 2026-01-09 08:28:03,534 | INFO     | mean y: 2646956.1333333333
[2026-01-09 03:28:46] 2026-01-09 08:28:03,534 | INFO     | intersect: -75364286532.08247
[2026-01-09 03:28:46] 2026-01-09 08:28:03,534 | INFO     | chi2: 1.5225498776380162
[2026-01-09 03:28:46] 2026-01-09 08:28:03,534 | INFO     | current chi2=1.5225498776380162 (change=-0.27828174334515043 %)
[2026-01-09 03:28:46] 2026-01-09 08:28:03,534 | INFO     | right removable region: 89
[2026-01-09 03:28:46] 2026-01-09 08:28:03,534 | INFO     | sum of square deviations: 265828240.0
[2026-01-09 03:28:46] 2026-01-09 08:28:03,535 | INFO     | sum of deviations: -12167726486.0
[2026-01-09 03:28:46] 2026-01-09 08:28:03,535 | INFO     | mean x: 1767944391.0
[2026-01-09 03:28:46] 2026-01-09 08:28:03,535 | INFO     | mean y: 2679021.347368421
[2026-01-09 03:28:46] 2026-01-09 08:28:03,535 | INFO     | intersect: 80926601145.44464
[2026-01-09 03:28:46] 2026-01-09 08:28:03,535 | INFO     | chi2: 0.8944414597436582
[2026-01-09 03:28:46] 2026-01-09 08:28:03,536 | INFO     | current chi2=0.8944414597436582 (change=60.96726768155916 %)
[2026-01-09 03:28:46] 2026-01-09 08:28:03,536 | INFO     | sum of square deviations: 226022842.5
[2026-01-09 03:28:46] 2026-01-09 08:28:03,536 | INFO     | sum of deviations: -10813120805.5
[2026-01-09 03:28:46] 2026-01-09 08:28:03,536 | INFO     | mean x: 1767944543.5
[2026-01-09 03:28:46] 2026-01-09 08:28:03,536 | INFO     | mean y: 2673586.988888889
[2026-01-09 03:28:46] 2026-01-09 08:28:03,537 | INFO     | intersect: 84582611237.71573
[2026-01-09 03:28:46] 2026-01-09 08:28:03,537 | INFO     | chi2: 0.8748651361778546
[2026-01-09 03:28:46] 2026-01-09 08:28:03,537 | INFO     | current chi2=0.8748651361778546 (change=2.18866459649736 %)
[2026-01-09 03:28:46] 2026-01-09 08:28:03,537 | INFO     | left removable region: 20
[2026-01-09 03:28:46] 2026-01-09 08:28:03,537 | INFO     | sum of square deviations: 101843770.0
[2026-01-09 03:28:46] 2026-01-09 08:28:03,537 | INFO     | sum of deviations: 656163824.0
[2026-01-09 03:28:46] 2026-01-09 08:28:03,538 | INFO     | mean x: 1767944513.0
[2026-01-09 03:28:46] 2026-01-09 08:28:03,538 | INFO     | mean y: 2676598.9420289854
[2026-01-09 03:28:46] 2026-01-09 08:28:03,538 | INFO     | intersect: -11387919333.14
[2026-01-09 03:28:46] 2026-01-09 08:28:03,538 | INFO     | chi2: 0.00012960372305240723
[2026-01-09 03:28:46] 2026-01-09 08:28:03,538 | INFO     | current memory leak: 6.44 B/s (using 69 data points, chi2=0.00)
[2026-01-09 03:28:46] 2026-01-09 08:28:03,538 | INFO     | could have reported an average CPU frequency of 2168 MHz (7 samples)
[2026-01-09 03:28:46] 2026-01-09 08:28:03,539 | INFO     | ..............................
[2026-01-09 03:28:46] 2026-01-09 08:28:03,539 | INFO     | . Timing measurements:
[2026-01-09 03:28:46] 2026-01-09 08:28:03,539 | INFO     | . get job = 0 s
[2026-01-09 03:28:46] 2026-01-09 08:28:03,539 | INFO     | . initial setup = 2 s
[2026-01-09 03:28:46] 2026-01-09 08:28:03,539 | INFO     | . payload setup = 7 s
[2026-01-09 03:28:46] 2026-01-09 08:28:03,539 | INFO     | . stage-in = 0 s
[2026-01-09 03:28:46] 2026-01-09 08:28:03,539 | INFO     | . payload execution = 6058 s
[2026-01-09 03:28:46] 2026-01-09 08:28:03,539 | INFO     | . stage-out = 0 s
[2026-01-09 03:28:46] 2026-01-09 08:28:03,539 | INFO     | . log creation = 0 s
[2026-01-09 03:28:46] 2026-01-09 08:28:03,540 | INFO     | ..............................
[2026-01-09 03:28:46] 2026-01-09 08:28:03,736 | INFO     | 
[2026-01-09 03:28:46] 2026-01-09 08:28:03,736 | INFO     | job summary report
[2026-01-09 03:28:46] 2026-01-09 08:28:03,736 | INFO     | --------------------------------------------------
[2026-01-09 03:28:46] 2026-01-09 08:28:03,736 | INFO     | PanDA job id: 6963155889
[2026-01-09 03:28:46] 2026-01-09 08:28:03,736 | INFO     | task id: 47898826
[2026-01-09 03:28:46] 2026-01-09 08:28:03,736 | INFO     | errors: (none)
[2026-01-09 03:28:46] 2026-01-09 08:28:03,737 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 03:28:46] 2026-01-09 08:28:03,737 | INFO     | pilot state: finished 
[2026-01-09 03:28:46] 2026-01-09 08:28:03,737 | INFO     | transexitcode: 0
[2026-01-09 03:28:46] 2026-01-09 08:28:03,737 | INFO     | exeerrorcode: 0
[2026-01-09 03:28:46] 2026-01-09 08:28:03,737 | INFO     | exeerrordiag: 
[2026-01-09 03:28:46] 2026-01-09 08:28:03,737 | INFO     | exitcode: 0
[2026-01-09 03:28:46] 2026-01-09 08:28:03,738 | INFO     | exitmsg: OK
[2026-01-09 03:28:46] 2026-01-09 08:28:03,738 | INFO     | cpuconsumptiontime: 65607 s
[2026-01-09 03:28:46] 2026-01-09 08:28:03,738 | INFO     | nevents: 400
[2026-01-09 03:28:46] 2026-01-09 08:28:03,738 | INFO     | neventsw: 0
[2026-01-09 03:28:46] 2026-01-09 08:28:03,738 | INFO     | pid: 12610
[2026-01-09 03:28:46] 2026-01-09 08:28:03,738 | INFO     | pgrp: 12610
[2026-01-09 03:28:46] 2026-01-09 08:28:03,738 | INFO     | corecount: 12
[2026-01-09 03:28:46] 2026-01-09 08:28:03,738 | INFO     | event service: False
[2026-01-09 03:28:46] 2026-01-09 08:28:03,738 | INFO     | sizes: {0: 2283741, 1: 2283996, 6: 2284258, 12: 2284286, 6069: 2311041, 6070: 2320039, 6071: 2320223, 6078: 2320417}
[2026-01-09 03:28:46] 2026-01-09 08:28:03,739 | INFO     | --------------------------------------------------
[2026-01-09 03:28:46] 2026-01-09 08:28:03,739 | INFO     | 
[2026-01-09 03:28:46] 2026-01-09 08:28:03,739 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 03:28:46] 2026-01-09 08:28:03,760 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 03:28:46] 2026-01-09 08:28:03,760 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 03:28:46] 2026-01-09 08:28:03,761 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 03:28:46] 2026-01-09 08:28:03,761 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 03:28:46] 2026-01-09 08:28:03,761 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 03:28:46] 2026-01-09 08:28:03,761 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 03:28:46] 2026-01-09 08:28:03,761 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 03:28:46] 2026-01-09 08:28:03,761 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 03:28:46] 2026-01-09 08:28:03,762 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 03:28:46] 2026-01-09 08:28:03,762 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 03:28:46] 2026-01-09 08:28:03,762 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 03:28:46] 2026-01-09 08:28:03,762 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 03:28:46] 2026-01-09 08:28:03,762 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 03:28:46] 2026-01-09 08:28:03,762 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 03:28:46] 2026-01-09 08:28:03,763 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 03:28:46] 2026-01-09 08:28:03,763 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 03:28:46] 2026-01-09 08:28:03,763 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 03:28:46] 2026-01-09 08:28:03,763 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 03:28:46] 2026-01-09 08:28:03,763 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 03:28:46] 2026-01-09 08:28:03,763 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 03:28:46] 2026-01-09 08:28:03,764 | INFO     | job 6963155889 has completed (purged errors)
[2026-01-09 03:28:46] 2026-01-09 08:28:03,764 | INFO     | overall cleanup function is called
[2026-01-09 03:28:46] 2026-01-09 08:28:04,772 | INFO     | --- collectZombieJob: --- 10, [12610]
[2026-01-09 03:28:46] 2026-01-09 08:28:04,772 | INFO     | zombie collector waiting for pid 12610
[2026-01-09 03:28:46] 2026-01-09 08:28:04,773 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 03:28:46] 2026-01-09 08:28:04,773 | INFO     | collected zombie processes
[2026-01-09 03:28:46] 2026-01-09 08:28:04,773 | INFO     | will attempt to kill all subprocesses of pid=12610
[2026-01-09 03:28:46] 2026-01-09 08:28:04,865 | INFO     | process IDs to be killed: [12610] (in reverse order)
[2026-01-09 03:28:46] 2026-01-09 08:28:05,000 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 03:28:46] 2026-01-09 08:28:05,001 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 03:28:46] 2026-01-09 08:28:05,005 | INFO     | did not find any defunct processes belonging to 12610
[2026-01-09 03:28:46] 2026-01-09 08:28:05,008 | INFO     | did not find any defunct processes belonging to 12610
[2026-01-09 03:28:46] 2026-01-09 08:28:05,008 | INFO     | ready for new job
[2026-01-09 03:28:46] 2026-01-09 08:28:05,008 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 03:28:46] 2026-01-09 08:28:05,009 | INFO     | ***************************************
[2026-01-09 03:28:46] 2026-01-09 08:28:05,010 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 03:28:46] 2026-01-09 08:28:05,010 | INFO     | ***************************************
[2026-01-09 03:28:46] 2026-01-09 08:28:05,010 | INFO     | 
[2026-01-09 03:28:46] 2026-01-09 08:28:05,010 | INFO     | architecture information:
[2026-01-09 03:28:46] 2026-01-09 08:28:05,011 | INFO     | executing command: cat /etc/os-release
[2026-01-09 03:28:46] 2026-01-09 08:28:05,025 | INFO     | cat /etc/os-release:
[2026-01-09 03:28:46] NAME="CentOS Linux"
[2026-01-09 03:28:46] VERSION="7 (Core)"
[2026-01-09 03:28:46] ID="centos"
[2026-01-09 03:28:46] ID_LIKE="rhel fedora"
[2026-01-09 03:28:46] VERSION_ID="7"
[2026-01-09 03:28:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 03:28:46] ANSI_COLOR="0;31"
[2026-01-09 03:28:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 03:28:46] HOME_URL="https://www.centos.org/"
[2026-01-09 03:28:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 03:28:46] 
[2026-01-09 03:28:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 03:28:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 03:28:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 03:28:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 03:28:46] 
[2026-01-09 03:28:46] 2026-01-09 08:28:05,025 | INFO     | ***************************************
[2026-01-09 03:28:46] 2026-01-09 08:28:05,528 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 03:28:46] 2026-01-09 08:28:05,544 | INFO     | sufficient remaining disk space (29317136384 B)
[2026-01-09 03:28:46] 2026-01-09 08:28:05,545 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 03:28:46] 2026-01-09 08:28:05,545 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 03:28:46] 2026-01-09 08:28:05,545 | INFO     | update_server=False
[2026-01-09 03:28:46] 2026-01-09 08:28:05,545 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 03:28:46] 2026-01-09 08:28:05,546 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 03:28:46] 2026-01-09 08:28:05,546 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 03:28:46] 2026-01-09 08:28:05,546 | INFO     | aborting loop
[2026-01-09 03:28:46] 2026-01-09 08:28:05,699 | INFO     | all data control threads have been joined
[2026-01-09 03:28:46] 2026-01-09 08:28:06,290 | INFO     | all job control threads have been joined
[2026-01-09 03:28:46] 2026-01-09 08:28:06,551 | INFO     | [job] retrieve thread has finished
[2026-01-09 03:28:46] 2026-01-09 08:28:06,552 | INFO     | [job] queue monitor thread has finished
[2026-01-09 03:28:46] 2026-01-09 08:28:06,552 | INFO     | [job] job monitor thread has finished
[2026-01-09 03:28:46] 2026-01-09 08:28:06,670 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 03:28:46] 2026-01-09 08:28:06,704 | INFO     | [data] control thread has finished
[2026-01-09 03:28:46] 2026-01-09 08:28:06,778 | INFO     | all payload control threads have been joined
[2026-01-09 03:28:46] 2026-01-09 08:28:06,793 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 03:28:46] 2026-01-09 08:28:06,806 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 03:28:46] 2026-01-09 08:28:06,986 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 03:28:46] 2026-01-09 08:28:07,011 | INFO     | [data] copytool_in thread has finished
[2026-01-09 03:28:46] 2026-01-09 08:28:07,153 | INFO     | [payload] validate_post thread has finished
[2026-01-09 03:28:46] 2026-01-09 08:28:07,296 | INFO     | [job] control thread has finished
[2026-01-09 03:28:46] 2026-01-09 08:28:07,327 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 03:28:46] 2026-01-09 08:28:07,777 | INFO     | [payload] failed_post thread has finished
[2026-01-09 03:28:46] 2026-01-09 08:28:07,784 | INFO     | [payload] control thread has finished
[2026-01-09 03:28:46] 2026-01-09 08:28:07,807 | INFO     | [job] validate thread has finished
[2026-01-09 03:28:46] 2026-01-09 08:28:07,875 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 03:28:46] 2026-01-09 08:28:08,672 | INFO     | [data] copytool_out thread has finished
[2026-01-09 03:28:46] 2026-01-09 08:28:11,333 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 03:28:46] 2026-01-09 08:28:35,034 | INFO     | PID=6249 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 03:28:46] 2026-01-09 08:28:35,034 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 03:28:46] 2026-01-09 08:28:35,034 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 03:28:46] 2026-01-09 08:28:35,034 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 03:28:46] 2026-01-09 08:28:39,177 | INFO     | [monitor] cgroup control has ended
[2026-01-09 03:28:46] 2026-01-09 08:28:40,914 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140618191275840)>', '<ExcThread(monitor, started 140617002764032)>']
[2026-01-09 03:28:46] 2026-01-09 08:28:41,065 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 03:28:46] 2026-01-09 08:28:41,065 | INFO     | [monitor] control thread has ended
[2026-01-09 03:28:46] 2026-01-09 08:28:45,936 | INFO     | all workflow threads have been joined
[2026-01-09 03:28:46] 2026-01-09 08:28:45,936 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 03:28:46] 2026-01-09 08:28:45,945 | INFO     | traces error code: 0
[2026-01-09 03:28:46] 2026-01-09 08:28:45,945 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 03:28:46] 2026-01-09 08:28:46,060 [wrapper] ==== pilot stdout END ====
[2026-01-09 03:28:46] 2026-01-09 08:28:46,064 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 03:28:46] 2026-01-09 08:28:46,067 [wrapper] pilotpid: 6249
[2026-01-09 03:28:46] 2026-01-09 08:28:46,071 [wrapper] Pilot exit status: 0
[2026-01-09 03:28:46] 2026-01-09 08:28:46,087 [wrapper] pandaids: 6963155889
[2026-01-09 03:28:46] 2026-01-09 08:28:46,130 [wrapper] cleanup supervisor_pilot 11733 6250
[2026-01-09 03:28:46] 2026-01-09 08:28:46,134 [wrapper] Test setup, not cleaning
[2026-01-09 03:28:46] 2026-01-09 08:28:46,138 [wrapper] apfmon messages muted
[2026-01-09 03:28:46] 2026-01-09 08:28:46,141 [wrapper] ==== wrapper stdout END ====
[2026-01-09 03:28:46] 2026-01-09 08:28:46,145 [wrapper] ==== wrapper stderr END ====
[2026-01-09 03:28:46]  *** Error codes and diagnostics ***
[2026-01-09 03:28:46]     "exeErrorCode": 0,
[2026-01-09 03:28:46]     "exeErrorDiag": "",
[2026-01-09 03:28:46]     "pilotErrorCode": 0,
[2026-01-09 03:28:46]     "pilotErrorDiag": "",
[2026-01-09 03:28:46]  *** Listing of results directory ***
[2026-01-09 03:28:46] total 437500
[2026-01-09 03:28:46] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 14:06 pilot3.tar.gz
[2026-01-09 03:28:46] -rwx------ 1 boincer umatlas     36322 Jan  8 14:06 runpilot2-wrapper.sh
[2026-01-09 03:28:46] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 14:07 queuedata.json
[2026-01-09 03:28:46] -rw-r--r-- 1 boincer umatlas       100 Jan  9 01:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 03:28:46] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 01:46 run_atlas
[2026-01-09 03:28:46] -rw-r--r-- 1 boincer umatlas       105 Jan  9 01:46 job.xml
[2026-01-09 03:28:46] -rw-r--r-- 2 boincer umatlas 223349144 Jan  9 01:46 EVNT.47898824._000884.pool.root.1
[2026-01-09 03:28:46] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 01:46 start_atlas.sh
[2026-01-09 03:28:46] drwxrwx--x 2 boincer umatlas      4096 Jan  9 01:46 shared
[2026-01-09 03:28:46] -rw-r--r-- 2 boincer umatlas    592388 Jan  9 01:46 input.tar.gz
[2026-01-09 03:28:46] -rw-r--r-- 1 boincer umatlas         0 Jan  9 01:46 boinc_lockfile
[2026-01-09 03:28:46] -rw-r--r-- 1 boincer umatlas      2518 Jan  9 01:46 pandaJob.out
[2026-01-09 03:28:46] -rw------- 1 boincer umatlas        57 Jan  9 01:46 setup.sh.local
[2026-01-09 03:28:46] -rw------- 1 boincer umatlas    989771 Jan  9 01:46 agis_schedconf.cvmfs.json
[2026-01-09 03:28:46] -rw------- 1 boincer umatlas   1516240 Jan  9 01:46 agis_ddmendpoints.agis.ALL.json
[2026-01-09 03:28:46] drwx------ 5 boincer umatlas      4096 Jan  9 01:46 pilot3
[2026-01-09 03:28:46] -rw-r--r-- 1 boincer umatlas      5951 Jan  9 03:21 init_data.xml
[2026-01-09 03:28:46] -rw------- 1 boincer umatlas 218190088 Jan  9 03:27 HITS.47898826._031110.pool.root.1
[2026-01-09 03:28:46] -rw-r--r-- 1 boincer umatlas       529 Jan  9 03:27 boinc_task_state.xml
[2026-01-09 03:28:46] -rw------- 1 boincer umatlas      1049 Jan  9 03:27 memory_monitor_summary.json
[2026-01-09 03:28:46] -rw------- 1 boincer umatlas        95 Jan  9 03:27 pilot_heartbeat.json
[2026-01-09 03:28:46] -rw------- 1 boincer umatlas    406657 Jan  9 03:27 log.47898826._031110.job.log.tgz.1
[2026-01-09 03:28:46] -rw------- 1 boincer umatlas      7853 Jan  9 03:28 heartbeat.json
[2026-01-09 03:28:46] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 03:28 boinc_mmap_file
[2026-01-09 03:28:46] -rw-r--r-- 1 boincer umatlas        27 Jan  9 03:28 wrapper_checkpoint.txt
[2026-01-09 03:28:46] -rw------- 1 boincer umatlas      4745 Jan  9 03:28 pilotlog.txt
[2026-01-09 03:28:46] -rw------- 1 boincer umatlas    866464 Jan  9 03:28 log.47898826._031110.job.log.1
[2026-01-09 03:28:46] -rw------- 1 boincer umatlas       357 Jan  9 03:28 output.list
[2026-01-09 03:28:46] -rw-r--r-- 1 boincer umatlas       620 Jan  9 03:28 runtime_log
[2026-01-09 03:28:46] -rw------- 1 boincer umatlas   1290240 Jan  9 03:28 result.tar.gz
[2026-01-09 03:28:46] -rw-r--r-- 1 boincer umatlas      9344 Jan  9 03:28 runtime_log.err
[2026-01-09 03:28:46] -rw------- 1 boincer umatlas       661 Jan  9 03:28 COrMDmYWAy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4zfKDmeQiMxn.diag
[2026-01-09 03:28:46] -rw-r--r-- 1 boincer umatlas     21184 Jan  9 03:28 stderr.txt
[2026-01-09 03:28:46] HITS file was successfully produced:
[2026-01-09 03:28:46] -rw------- 1 boincer umatlas 218190088 Jan  9 03:27 shared/HITS.pool.root.1
[2026-01-09 03:28:46]  *** Contents of shared directory: ***
[2026-01-09 03:28:46] total 433056
[2026-01-09 03:28:46] -rw-r--r-- 2 boincer umatlas 223349144 Jan  9 01:46 ATLAS.root_0
[2026-01-09 03:28:46] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 01:46 start_atlas.sh
[2026-01-09 03:28:46] -rw-r--r-- 2 boincer umatlas    592388 Jan  9 01:46 input.tar.gz
[2026-01-09 03:28:46] -rw------- 1 boincer umatlas 218190088 Jan  9 03:27 HITS.pool.root.1
[2026-01-09 03:28:46] -rw------- 1 boincer umatlas   1290240 Jan  9 03:28 result.tar.gz
03:28:47 (2525): run_atlas exited; CPU time 65580.298973
03:28:47 (2525): called boinc_finish(0)

</stderr_txt>
]]>

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