Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:44:47 (31318): wrapper (7.7.26015): starting
10:44:47 (31318): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 10:44:47] Arguments: --nthreads 8
[2026-01-09 10:44:47] Threads: 8
[2026-01-09 10:44:47] Checking for CVMFS
[2026-01-09 10:44:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 10:44:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 10:44:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 10:44:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 10:44:48] 2.11.2.0 21292 35234 128220 154938 1 57 24859595 25165824 0 130560 0 7827581 99.581 11327576 5194 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-09 10:44:48] CVMFS is ok
[2026-01-09 10:44:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 10:44:48] Checking for apptainer binary...
[2026-01-09 10:44:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 10:44:48] Running /usr/bin/apptainer --version
[2026-01-09 10:44:48] apptainer version 1.3.2-1.el7
[2026-01-09 10:44:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 10:44:49] cg-vwn383.simple-grid.lan
[2026-01-09 10:44:49] apptainer works
[2026-01-09 10:44:49] Set ATHENA_PROC_NUMBER=8
[2026-01-09 10:44:49] Set ATHENA_CORE_NUMBER=8
[2026-01-09 10:44:49] Starting ATLAS job with PandaID=6963168711
[2026-01-09 10:44:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/25 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 13:26:27]  *** The last 200 lines of the pilot log: ***
[2026-01-09 13:26:27] 2026-01-09 12:25:38,974 | INFO     | monitor loop #659: job 0:6963168711 is in state 'finished'
[2026-01-09 13:26:27] 2026-01-09 12:25:38,974 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 13:26:27] 2026-01-09 12:25:39,921 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 13:26:27] 2026-01-09 12:25:39,922 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-09 13:26:27] 2026-01-09 12:25:39,924 | INFO     | using path: /var/lib/boinc/slots/25/PanDA_Pilot-6963168711/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 13:26:27] 2026-01-09 12:25:39,924 | INFO     | extracted standard info from prmon json
[2026-01-09 13:26:27] 2026-01-09 12:25:39,924 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 13:26:27] 2026-01-09 12:25:39,925 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 13:26:27] 2026-01-09 12:25:39,925 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 13:26:27] 2026-01-09 12:25:39,925 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 13:26:27] 2026-01-09 12:25:39,929 | INFO     | fitting pss+swap vs Time
[2026-01-09 13:26:27] 2026-01-09 12:25:39,929 | INFO     | sum of square deviations: 1223016419.5
[2026-01-09 13:26:27] 2026-01-09 12:25:39,930 | INFO     | sum of deviations: -6487468400.999999
[2026-01-09 13:26:27] 2026-01-09 12:25:39,930 | INFO     | mean x: 1767956724.5
[2026-01-09 13:26:27] 2026-01-09 12:25:39,930 | INFO     | mean y: 2498366.341772152
[2026-01-09 13:26:27] 2026-01-09 12:25:39,931 | INFO     | intersect: 9380592725.220665
[2026-01-09 13:26:27] 2026-01-09 12:25:39,931 | INFO     | chi2: 2.382763217894797
[2026-01-09 13:26:27] 2026-01-09 12:25:39,931 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 13:26:27] 2026-01-09 12:25:39,932 | INFO     | sum of deviations: 4148447556.999998
[2026-01-09 13:26:27] 2026-01-09 12:25:39,932 | INFO     | mean x: 1767956572.0
[2026-01-09 13:26:27] 2026-01-09 12:25:39,932 | INFO     | mean y: 2512424.9607843137
[2026-01-09 13:26:27] 2026-01-09 12:25:39,933 | INFO     | intersect: -6601730407.583489
[2026-01-09 13:26:27] 2026-01-09 12:25:39,933 | INFO     | chi2: 1.6220517984359073
[2026-01-09 13:26:27] 2026-01-09 12:25:39,933 | INFO     | current chi2=1.6220517984359073 (change=31.92559855489915 %)
[2026-01-09 13:26:27] 2026-01-09 12:25:39,933 | INFO     | sum of square deviations: 1005179777.0
[2026-01-09 13:26:27] 2026-01-09 12:25:39,934 | INFO     | sum of deviations: 4177312177.5000005
[2026-01-09 13:26:27] 2026-01-09 12:25:39,934 | INFO     | mean x: 1767956419.5
[2026-01-09 13:26:27] 2026-01-09 12:25:39,935 | INFO     | mean y: 2512466.6554054054
[2026-01-09 13:26:27] 2026-01-09 12:25:39,935 | INFO     | intersect: -7344736303.617705
[2026-01-09 13:26:27] 2026-01-09 12:25:39,935 | INFO     | chi2: 1.6232928450897177
[2026-01-09 13:26:27] 2026-01-09 12:25:39,935 | INFO     | current chi2=1.6232928450897177 (change=-0.07651091383192077 %)
[2026-01-09 13:26:27] 2026-01-09 12:25:39,935 | INFO     | right removable region: 147
[2026-01-09 13:26:27] 2026-01-09 12:25:39,936 | INFO     | sum of square deviations: 1110539892.0
[2026-01-09 13:26:27] 2026-01-09 12:25:39,937 | INFO     | sum of deviations: -30160865803.0
[2026-01-09 13:26:27] 2026-01-09 12:25:39,937 | INFO     | mean x: 1767956877.0
[2026-01-09 13:26:27] 2026-01-09 12:25:39,937 | INFO     | mean y: 2529987.640522876
[2026-01-09 13:26:27] 2026-01-09 12:25:39,937 | INFO     | intersect: 48018013714.80048
[2026-01-09 13:26:27] 2026-01-09 12:25:39,937 | INFO     | chi2: 0.9223382325093865
[2026-01-09 13:26:27] 2026-01-09 12:25:39,938 | INFO     | current chi2=0.9223382325093865 (change=61.291234245075984 %)
[2026-01-09 13:26:27] 2026-01-09 12:25:39,938 | INFO     | sum of square deviations: 1005179777.0
[2026-01-09 13:26:27] 2026-01-09 12:25:39,939 | INFO     | sum of deviations: -28620281309.5
[2026-01-09 13:26:27] 2026-01-09 12:25:39,939 | INFO     | mean x: 1767957029.5
[2026-01-09 13:26:27] 2026-01-09 12:25:39,939 | INFO     | mean y: 2527675.6554054054
[2026-01-09 13:26:27] 2026-01-09 12:25:39,939 | INFO     | intersect: 50341212043.55429
[2026-01-09 13:26:27] 2026-01-09 12:25:39,940 | INFO     | chi2: 0.9068354299455786
[2026-01-09 13:26:27] 2026-01-09 12:25:39,940 | INFO     | current chi2=0.9068354299455786 (change=1.680815347058716 %)
[2026-01-09 13:26:27] 2026-01-09 12:25:39,940 | INFO     | left removable region: 20
[2026-01-09 13:26:27] 2026-01-09 12:25:39,940 | INFO     | sum of square deviations: 635130048.0
[2026-01-09 13:26:27] 2026-01-09 12:25:39,941 | INFO     | sum of deviations: -8033613440.999999
[2026-01-09 13:26:27] 2026-01-09 12:25:39,941 | INFO     | mean x: 1767956999.0
[2026-01-09 13:26:27] 2026-01-09 12:25:39,941 | INFO     | mean y: 2527994.188976378
[2026-01-09 13:26:27] 2026-01-09 12:25:39,941 | INFO     | intersect: 22365008174.431404
[2026-01-09 13:26:27] 2026-01-09 12:25:39,941 | INFO     | chi2: 0.07600318335331929
[2026-01-09 13:26:27] 2026-01-09 12:25:39,942 | INFO     | current memory leak: -12.65 B/s (using 127 data points, chi2=0.08)
[2026-01-09 13:26:27] 2026-01-09 12:25:39,942 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-01-09 13:26:27] 2026-01-09 12:25:39,942 | INFO     | ..............................
[2026-01-09 13:26:27] 2026-01-09 12:25:39,942 | INFO     | . Timing measurements:
[2026-01-09 13:26:27] 2026-01-09 12:25:39,943 | INFO     | . get job = 0 s
[2026-01-09 13:26:27] 2026-01-09 12:25:39,943 | INFO     | . initial setup = 2 s
[2026-01-09 13:26:27] 2026-01-09 12:25:39,943 | INFO     | . payload setup = 7 s
[2026-01-09 13:26:27] 2026-01-09 12:25:39,943 | INFO     | . stage-in = 0 s
[2026-01-09 13:26:27] 2026-01-09 12:25:39,943 | INFO     | . payload execution = 9597 s
[2026-01-09 13:26:27] 2026-01-09 12:25:39,943 | INFO     | . stage-out = 1 s
[2026-01-09 13:26:27] 2026-01-09 12:25:39,943 | INFO     | . log creation = 0 s
[2026-01-09 13:26:27] 2026-01-09 12:25:39,943 | INFO     | ..............................
[2026-01-09 13:26:27] 2026-01-09 12:25:40,056 | INFO     | 
[2026-01-09 13:26:27] 2026-01-09 12:25:40,057 | INFO     | job summary report
[2026-01-09 13:26:27] 2026-01-09 12:25:40,057 | INFO     | --------------------------------------------------
[2026-01-09 13:26:27] 2026-01-09 12:25:40,057 | INFO     | PanDA job id: 6963168711
[2026-01-09 13:26:27] 2026-01-09 12:25:40,057 | INFO     | task id: 47898826
[2026-01-09 13:26:27] 2026-01-09 12:25:40,057 | INFO     | errors: (none)
[2026-01-09 13:26:27] 2026-01-09 12:25:40,057 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 13:26:27] 2026-01-09 12:25:40,057 | INFO     | pilot state: finished 
[2026-01-09 13:26:27] 2026-01-09 12:25:40,057 | INFO     | transexitcode: 0
[2026-01-09 13:26:27] 2026-01-09 12:25:40,058 | INFO     | exeerrorcode: 0
[2026-01-09 13:26:27] 2026-01-09 12:25:40,058 | INFO     | exeerrordiag: 
[2026-01-09 13:26:27] 2026-01-09 12:25:40,058 | INFO     | exitcode: 0
[2026-01-09 13:26:27] 2026-01-09 12:25:40,058 | INFO     | exitmsg: OK
[2026-01-09 13:26:27] 2026-01-09 12:25:40,058 | INFO     | cpuconsumptiontime: 73078 s
[2026-01-09 13:26:27] 2026-01-09 12:25:40,058 | INFO     | nevents: 400
[2026-01-09 13:26:27] 2026-01-09 12:25:40,058 | INFO     | neventsw: 0
[2026-01-09 13:26:27] 2026-01-09 12:25:40,058 | INFO     | pid: 9096
[2026-01-09 13:26:27] 2026-01-09 12:25:40,059 | INFO     | pgrp: 9096
[2026-01-09 13:26:27] 2026-01-09 12:25:40,059 | INFO     | corecount: 8
[2026-01-09 13:26:27] 2026-01-09 12:25:40,059 | INFO     | event service: False
[2026-01-09 13:26:27] 2026-01-09 12:25:40,059 | INFO     | sizes: {0: 2283800, 1: 2283999, 6: 2284261, 11: 2284289, 9608: 2312496, 9611: 2321680, 9619: 2321818}
[2026-01-09 13:26:27] 2026-01-09 12:25:40,059 | INFO     | --------------------------------------------------
[2026-01-09 13:26:27] 2026-01-09 12:25:40,059 | INFO     | 
[2026-01-09 13:26:27] 2026-01-09 12:25:40,059 | INFO     | executing command: ls -lF /var/lib/boinc/slots/25
[2026-01-09 13:26:27] 2026-01-09 12:25:40,082 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 13:26:27] 2026-01-09 12:25:40,082 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 13:26:27] 2026-01-09 12:25:40,082 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 13:26:27] 2026-01-09 12:25:40,082 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 13:26:27] 2026-01-09 12:25:40,082 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 13:26:27] 2026-01-09 12:25:40,082 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 13:26:27] 2026-01-09 12:25:40,082 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 13:26:27] 2026-01-09 12:25:40,083 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 13:26:27] 2026-01-09 12:25:40,083 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 13:26:27] 2026-01-09 12:25:40,083 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 13:26:27] 2026-01-09 12:25:40,083 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 13:26:27] 2026-01-09 12:25:40,083 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 13:26:27] 2026-01-09 12:25:40,083 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 13:26:27] 2026-01-09 12:25:40,083 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 13:26:27] 2026-01-09 12:25:40,083 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 13:26:27] 2026-01-09 12:25:40,083 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 13:26:27] 2026-01-09 12:25:40,083 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 13:26:27] 2026-01-09 12:25:40,083 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 13:26:27] 2026-01-09 12:25:40,084 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 13:26:27] 2026-01-09 12:25:40,084 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 13:26:27] 2026-01-09 12:25:40,084 | INFO     | job 6963168711 has completed (purged errors)
[2026-01-09 13:26:27] 2026-01-09 12:25:40,084 | INFO     | overall cleanup function is called
[2026-01-09 13:26:27] 2026-01-09 12:25:41,092 | INFO     | --- collectZombieJob: --- 10, [9096]
[2026-01-09 13:26:27] 2026-01-09 12:25:41,092 | INFO     | zombie collector waiting for pid 9096
[2026-01-09 13:26:27] 2026-01-09 12:25:41,092 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 13:26:27] 2026-01-09 12:25:41,093 | INFO     | collected zombie processes
[2026-01-09 13:26:27] 2026-01-09 12:25:41,093 | INFO     | will attempt to kill all subprocesses of pid=9096
[2026-01-09 13:26:27] 2026-01-09 12:25:41,159 | INFO     | process IDs to be killed: [9096] (in reverse order)
[2026-01-09 13:26:27] 2026-01-09 12:25:41,203 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 13:26:27] 2026-01-09 12:25:41,204 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 13:26:27] 2026-01-09 12:25:41,206 | INFO     | did not find any defunct processes belonging to 9096
[2026-01-09 13:26:27] 2026-01-09 12:25:41,207 | INFO     | did not find any defunct processes belonging to 9096
[2026-01-09 13:26:27] 2026-01-09 12:25:41,208 | INFO     | ready for new job
[2026-01-09 13:26:27] 2026-01-09 12:25:41,208 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 13:26:27] 2026-01-09 12:25:41,210 | INFO     | ***************************************
[2026-01-09 13:26:27] 2026-01-09 12:25:41,210 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 13:26:27] 2026-01-09 12:25:41,210 | INFO     | ***************************************
[2026-01-09 13:26:27] 2026-01-09 12:25:41,210 | INFO     | 
[2026-01-09 13:26:27] 2026-01-09 12:25:41,211 | INFO     | pilot is running in a VM
[2026-01-09 13:26:27] 2026-01-09 12:25:41,211 | INFO     | architecture information:
[2026-01-09 13:26:27] 2026-01-09 12:25:41,211 | INFO     | executing command: cat /etc/os-release
[2026-01-09 13:26:27] 2026-01-09 12:25:41,228 | INFO     | cat /etc/os-release:
[2026-01-09 13:26:27] NAME="CentOS Linux"
[2026-01-09 13:26:27] VERSION="7 (Core)"
[2026-01-09 13:26:27] ID="centos"
[2026-01-09 13:26:27] ID_LIKE="rhel fedora"
[2026-01-09 13:26:27] VERSION_ID="7"
[2026-01-09 13:26:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 13:26:27] ANSI_COLOR="0;31"
[2026-01-09 13:26:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 13:26:27] HOME_URL="https://www.centos.org/"
[2026-01-09 13:26:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 13:26:27] 
[2026-01-09 13:26:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 13:26:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 13:26:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 13:26:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 13:26:27] 
[2026-01-09 13:26:27] 2026-01-09 12:25:41,228 | INFO     | ***************************************
[2026-01-09 13:26:27] 2026-01-09 12:25:41,732 | INFO     | executing command: df -mP /var/lib/boinc/slots/25
[2026-01-09 13:26:27] 2026-01-09 12:25:41,751 | INFO     | sufficient remaining disk space (498106105856 B)
[2026-01-09 13:26:27] 2026-01-09 12:25:41,751 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 13:26:27] 2026-01-09 12:25:41,751 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 13:26:27] 2026-01-09 12:25:41,751 | INFO     | update_server=False
[2026-01-09 13:26:27] 2026-01-09 12:25:41,751 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 13:26:27] 2026-01-09 12:25:41,752 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:26:27] 2026-01-09 12:25:41,848 | INFO     | all data control threads have been joined
[2026-01-09 13:26:27] 2026-01-09 12:25:42,409 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 13:26:27] 2026-01-09 12:25:42,488 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 13:26:27] 2026-01-09 12:25:42,488 | INFO     | aborting loop
[2026-01-09 13:26:27] 2026-01-09 12:25:42,520 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 13:26:27] 2026-01-09 12:25:42,757 | INFO     | [job] retrieve thread has finished
[2026-01-09 13:26:27] 2026-01-09 12:25:42,758 | INFO     | [job] queue monitor thread has finished
[2026-01-09 13:26:27] 2026-01-09 12:25:42,854 | INFO     | [data] control thread has finished
[2026-01-09 13:26:27] 2026-01-09 12:25:43,062 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 13:26:27] 2026-01-09 12:25:43,132 | INFO     | [payload] validate_post thread has finished
[2026-01-09 13:26:27] 2026-01-09 12:25:43,252 | INFO     | all payload control threads have been joined
[2026-01-09 13:26:27] 2026-01-09 12:25:43,326 | INFO     | all job control threads have been joined
[2026-01-09 13:26:27] 2026-01-09 12:25:43,383 | INFO     | [payload] failed_post thread has finished
[2026-01-09 13:26:27] 2026-01-09 12:25:43,494 | INFO     | [job] job monitor thread has finished
[2026-01-09 13:26:27] 2026-01-09 12:25:43,536 | INFO     | [job] validate thread has finished
[2026-01-09 13:26:27] 2026-01-09 12:25:43,568 | INFO     | [data] copytool_in thread has finished
[2026-01-09 13:26:27] 2026-01-09 12:25:43,569 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 13:26:27] 2026-01-09 12:25:43,792 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 13:26:27] 2026-01-09 12:25:43,835 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 13:26:27] 2026-01-09 12:25:44,257 | INFO     | [payload] control thread has finished
[2026-01-09 13:26:27] 2026-01-09 12:25:44,332 | INFO     | [job] control thread has finished
[2026-01-09 13:26:27] 2026-01-09 12:25:44,415 | INFO     | [data] copytool_out thread has finished
[2026-01-09 13:26:27] 2026-01-09 12:25:46,527 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 13:26:27] 2026-01-09 12:26:11,313 | INFO     | PID=2643 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 13:26:27] 2026-01-09 12:26:11,314 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 13:26:27] 2026-01-09 12:26:11,314 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 13:26:27] 2026-01-09 12:26:11,314 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 13:26:27] 2026-01-09 12:26:20,498 | INFO     | [monitor] cgroup control has ended
[2026-01-09 13:26:27] 2026-01-09 12:26:21,684 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139824761808704)>', '<ExcThread(monitor, started 139823725668096)>']
[2026-01-09 13:26:27] 2026-01-09 12:26:22,370 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 13:26:27] 2026-01-09 12:26:22,371 | INFO     | [monitor] control thread has ended
[2026-01-09 13:26:27] 2026-01-09 12:26:26,710 | INFO     | all workflow threads have been joined
[2026-01-09 13:26:27] 2026-01-09 12:26:26,710 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 13:26:27] 2026-01-09 12:26:26,710 | INFO     | traces error code: 0
[2026-01-09 13:26:27] 2026-01-09 12:26:26,711 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 13:26:27] 2026-01-09 12:26:26,842 [wrapper] ==== pilot stdout END ====
[2026-01-09 13:26:27] 2026-01-09 12:26:26,846 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 13:26:27] 2026-01-09 12:26:26,852 [wrapper] pilotpid: 2643
[2026-01-09 13:26:27] 2026-01-09 12:26:26,858 [wrapper] Pilot exit status: 0
[2026-01-09 13:26:27] 2026-01-09 12:26:26,875 [wrapper] pandaids: 6963168711
[2026-01-09 13:26:27] 2026-01-09 12:26:26,931 [wrapper] cleanup supervisor_pilot 25889 2644
[2026-01-09 13:26:27] 2026-01-09 12:26:26,941 [wrapper] Test setup, not cleaning
[2026-01-09 13:26:27] 2026-01-09 12:26:26,946 [wrapper] apfmon messages muted
[2026-01-09 13:26:27] 2026-01-09 12:26:26,952 [wrapper] ==== wrapper stdout END ====
[2026-01-09 13:26:27] 2026-01-09 12:26:26,955 [wrapper] ==== wrapper stderr END ====
[2026-01-09 13:26:27]  *** Error codes and diagnostics ***
[2026-01-09 13:26:27]     "exeErrorCode": 0,
[2026-01-09 13:26:27]     "exeErrorDiag": "",
[2026-01-09 13:26:27]     "pilotErrorCode": 0,
[2026-01-09 13:26:27]     "pilotErrorDiag": "",
[2026-01-09 13:26:27]  *** Listing of results directory ***
[2026-01-09 13:26:27] total 437080
[2026-01-09 13:26:27] -rw-r--r--. 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-09 13:26:27] -rwx------. 1 boinc boinc     36322 Jan  9 01:57 runpilot2-wrapper.sh
[2026-01-09 13:26:27] -rw-r--r--. 1 boinc boinc      5112 Jan  9 02:01 queuedata.json
[2026-01-09 13:26:27] -rw-r--r--. 1 boinc boinc       100 Jan  9 10:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 13:26:27] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 10:44 run_atlas
[2026-01-09 13:26:27] -rw-r--r--. 1 boinc boinc       105 Jan  9 10:44 job.xml
[2026-01-09 13:26:27] -rw-r--r--. 2 boinc boinc 223279536 Jan  9 10:44 EVNT.47898824._001388.pool.root.1
[2026-01-09 13:26:27] -rw-r--r--. 2 boinc boinc     15847 Jan  9 10:44 start_atlas.sh
[2026-01-09 13:26:27] drwxrwx--x. 2 boinc boinc        68 Jan  9 10:44 shared
[2026-01-09 13:26:27] -rw-r--r--. 2 boinc boinc    592402 Jan  9 10:44 input.tar.gz
[2026-01-09 13:26:27] -rw-r--r--. 1 boinc boinc      6391 Jan  9 10:44 init_data.xml
[2026-01-09 13:26:27] -rw-r--r--. 1 boinc boinc         0 Jan  9 10:44 boinc_lockfile
[2026-01-09 13:26:27] -rw-r--r--. 1 boinc boinc      2519 Jan  9 10:44 pandaJob.out
[2026-01-09 13:26:27] -rw-------. 1 boinc boinc    989751 Jan  9 10:45 agis_schedconf.cvmfs.json
[2026-01-09 13:26:27] -rw-------. 1 boinc boinc   1516240 Jan  9 10:45 agis_ddmendpoints.agis.ALL.json
[2026-01-09 13:26:27] drwx------. 5 boinc boinc      4096 Jan  9 10:45 pilot3
[2026-01-09 13:26:27] -rw-------. 1 boinc boinc 217026239 Jan  9 13:24 HITS.47898826._036238.pool.root.1
[2026-01-09 13:26:27] -rw-r--r--. 1 boinc boinc       529 Jan  9 13:24 boinc_task_state.xml
[2026-01-09 13:26:27] -rw-------. 1 boinc boinc      1011 Jan  9 13:25 memory_monitor_summary.json
[2026-01-09 13:26:27] -rw-------. 1 boinc boinc    394161 Jan  9 13:25 log.47898826._036238.job.log.tgz.1
[2026-01-09 13:26:27] -rw-------. 1 boinc boinc      7767 Jan  9 13:25 heartbeat.json
[2026-01-09 13:26:27] -rw-r--r--. 1 boinc boinc      8192 Jan  9 13:26 boinc_mmap_file
[2026-01-09 13:26:27] -rw-r--r--. 1 boinc boinc        27 Jan  9 13:26 wrapper_checkpoint.txt
[2026-01-09 13:26:27] -rw-------. 1 boinc boinc        95 Jan  9 13:26 pilot_heartbeat.json
[2026-01-09 13:26:27] -rw-------. 1 boinc boinc      4809 Jan  9 13:26 pilotlog.txt
[2026-01-09 13:26:27] -rw-------. 1 boinc boinc   1291289 Jan  9 13:26 log.47898826._036238.job.log.1
[2026-01-09 13:26:27] -rw-------. 1 boinc boinc       357 Jan  9 13:26 output.list
[2026-01-09 13:26:27] -rw-r--r--. 1 boinc boinc       620 Jan  9 13:26 runtime_log
[2026-01-09 13:26:27] -rw-------. 1 boinc boinc   1699840 Jan  9 13:26 result.tar.gz
[2026-01-09 13:26:27] -rw-r--r--. 1 boinc boinc      8832 Jan  9 13:26 runtime_log.err
[2026-01-09 13:26:27] -rw-------. 1 boinc boinc       652 Jan  9 13:26 L4iNDmB0Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMtlKDm3njRbn.diag
[2026-01-09 13:26:27] -rw-r--r--. 1 boinc boinc     20741 Jan  9 13:26 stderr.txt
[2026-01-09 13:26:27] HITS file was successfully produced:
[2026-01-09 13:26:27] -rw-------. 1 boinc boinc 217026239 Jan  9 13:24 shared/HITS.pool.root.1
[2026-01-09 13:26:27]  *** Contents of shared directory: ***
[2026-01-09 13:26:27] total 432244
[2026-01-09 13:26:27] -rw-r--r--. 2 boinc boinc 223279536 Jan  9 10:44 ATLAS.root_0
[2026-01-09 13:26:27] -rw-r--r--. 2 boinc boinc     15847 Jan  9 10:44 start_atlas.sh
[2026-01-09 13:26:27] -rw-r--r--. 2 boinc boinc    592402 Jan  9 10:44 input.tar.gz
[2026-01-09 13:26:27] -rw-------. 1 boinc boinc 217026239 Jan  9 13:24 HITS.pool.root.1
[2026-01-09 13:26:27] -rw-------. 1 boinc boinc   1699840 Jan  9 13:26 result.tar.gz
13:26:28 (31318): run_atlas exited; CPU time 73147.743172
13:26:28 (31318): called boinc_finish(0)

</stderr_txt>
]]>

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